>PCF11_HUMAN (O94913) Pre-mRNA cleavage complex 2 protein Pcf11 (Pre-mRNA|
           cleavage complex II protein Pcf11) (Fragment)
          Length = 1654

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 141 NGNPITNKR*DVKNYNRKSKPKSNPPLQSKLMQTR 245
           +G  IT K  D  +   KSK KS  PL++KL  T+
Sbjct: 447 SGEKITKKELDQLDSKSKSKSKSPSPLKNKLSHTK 481


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,523,742
Number of Sequences: 219361
Number of extensions: 837288
Number of successful extensions: 1941
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1941
length of database: 80,573,946
effective HSP length: 78
effective length of database: 63,463,788
effective search space used: 1523130912
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)