ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart34e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 56 1e-04
2emb|AJ302297.1|HVU302297 Hordeum vulgare genomic sequence, clone... 56 1e-04
3gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.028
4gb|AC138002.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.028
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
6dbj|AK066020.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
7dbj|AK064889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.028
9gb|AC018631.3| Drosophila melanogaster clone BACR03I06, complete... 46 0.11
10gb|AC142257.4| Mus musculus BAC clone RP24-511I4 from chromosome... 46 0.11
11gb|AC074354.8|AC074354 Genomic Sequence for Oryza sativa, Nippon... 46 0.11
12dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
13gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 ... 46 0.11
14gb|AC104328.10| Mus musculus strain C57BL/6J chromosome 18 clone... 46 0.11
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
16gb|AY850394.1| Lycopersicon esculentum cultivar Heinz1706 chromo... 44 0.44
17gb|DQ490470.1| Emericella nidulans alpha-glucosidase (AN0941-2) ... 42 1.8
18ref|XM_653453.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.8
19gb|AC105903.2| Homo sapiens chromosome 3 clone RP11-606H24, comp... 42 1.8
20dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
22dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
23dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
24gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone mth2-8... 42 1.8
25gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
26emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.8
27ref|XM_480344.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
28ref|XM_480290.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
29ref|XM_425580.1| PREDICTED: Gallus gallus similar to Gamma-amino... 40 6.9
30gb|AC125324.4| Mus musculus BAC clone RP23-284J23 from chromosom... 40 6.9
31emb|BX004847.31| Zebrafish DNA sequence from clone CH211-59C8 in... 40 6.9
32gb|AF538039.2| Triticum aestivum Mal-like protein mRNA, complete... 40 6.9
33gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
34gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
35emb|AL353689.26| Human DNA sequence from clone RP5-1087E8 on chr... 40 6.9
36emb|AL162573.15| Human DNA sequence from clone RP11-275J18 on ch... 40 6.9
37emb|AL022067.1|HS134E15 Human DNA sequence from clone RP1-134E15... 40 6.9
38gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 40 6.9
39gb|AC144374.5| Gallus gallus strain White Leghorn clone xx-37d21... 40 6.9
40gb|AC091818.2| Homo sapiens chromosome 5 clone CTC-204P14, compl... 40 6.9
41dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
42dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
43gb|DQ345781.1| Prunus mume self-incompatibility S-RNase (S) gene... 40 6.9
44gb|AC012485.13| Homo sapiens BAC clone RP11-5O24 from 2, complet... 40 6.9
45gb|AY853594.1| Prunus armeniaca S-RNase S9 gene, partial cds 40 6.9
46dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
47dbj|AP003538.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
48dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
49dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
50dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
51gb|AC003998.1|AC003998 Human PAC clone RP1-161J9 from 5q31, comp... 40 6.9
52dbj|AK066312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
53gb|AC120410.11| Mus musculus chromosome 18, clone RP24-441C8, co... 40 6.9
54emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102... 40 6.9
55gb|AC147968.2| Gallus gallus BAC clone CH261-119F24 from chromos... 40 6.9
56emb|AL805970.8| Mouse DNA sequence from clone RP23-438O3 on chro... 40 6.9 
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                              
Query: 338    tctggatatatacataagtacaacaaacaagt 369
              |||||||||||||||| |||||||||||||||
Sbjct: 210541 tctggatatatacataggtacaacaaacaagt 210510
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>emb|AJ302297.1|HVU302297 Hordeum vulgare genomic sequence, clone BAC 80H14, isolate Mla-RGH1a
          Length = 2904

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 338  tctggatatatacataagtacaacaaacaagt 369
            |||||||||||||||| |||||||||||||||
Sbjct: 1328 tctggatatatacataggtacaacaaacaagt 1297
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>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0055D24 map C535, complete sequence
          Length = 174759

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                            
Query: 208  gatcatgcttctgttgacaagttcactgaaataactctctgcttcttg 255
            ||||||||||||||||| ||| ||| | | ||||||||||||| ||||
Sbjct: 5853 gatcatgcttctgttgataagatcattaagataactctctgctacttg 5900
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>gb|AC138002.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0011I07 map S10207, complete sequence
          Length = 123847

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 208   gatcatgcttctgttgacaagttcactgaaataactctctgcttcttg 255
             ||||||||||||||||| ||| ||| | | ||||||||||||| ||||
Sbjct: 20948 gatcatgcttctgttgataagatcattaagataactctctgctacttg 20901
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                               
Query: 208     gatcatgcttctgttgacaagttcactgaaataactctctgcttcttg 255
               ||||||||||||||||| ||| ||| | | ||||||||||||| ||||
Sbjct: 9012374 gatcatgcttctgttgataagatcattaagataactctctgctacttg 9012327



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 338      tctggatatatacataagtacaacaaacaagtcttgaggt 377
                ||||||||||| | || |||||||| ||||||||| ||||
Sbjct: 21477703 tctggatatatgcttaggtacaacatacaagtctttaggt 21477664
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>dbj|AK066020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046N19, full
            insert sequence
          Length = 4001

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 208  gatcatgcttctgttgacaagttcactgaaataactctctgcttcttg 255
            ||||||||||||||||| ||| ||| | | ||||||||||||| ||||
Sbjct: 2389 gatcatgcttctgttgataagatcattaagataactctctgctacttg 2342
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>dbj|AK064889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K14, full
            insert sequence
          Length = 3165

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 208  gatcatgcttctgttgacaagttcactgaaataactctctgcttcttg 255
            ||||||||||||||||| ||| ||| | | ||||||||||||| ||||
Sbjct: 1553 gatcatgcttctgttgataagatcattaagataactctctgctacttg 1506
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                               
Query: 208     gatcatgcttctgttgacaagttcactgaaataactctctgcttcttg 255
               ||||||||||||||||| ||| ||| | | ||||||||||||| ||||
Sbjct: 9084071 gatcatgcttctgttgataagatcattaagataactctctgctacttg 9084024



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 338      tctggatatatacataagtacaacaaacaagtcttgaggt 377
                ||||||||||| | || |||||||| ||||||||| ||||
Sbjct: 21787902 tctggatatatgcttaggtacaacatacaagtctttaggt 21787863
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>gb|AC018631.3| Drosophila melanogaster clone BACR03I06, complete sequence
          Length = 169851

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 17    atgttcaaattcaggttatacat 39
             |||||||||||||||||||||||
Sbjct: 98443 atgttcaaattcaggttatacat 98465
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>gb|AC142257.4| Mus musculus BAC clone RP24-511I4 from chromosome 18, complete sequence
          Length = 140990

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 225   caagttcactgaaataactctctgcttcttg 255
             |||||||| | ||||||||||||||||||||
Sbjct: 19992 caagttcattcaaataactctctgcttcttg 19962
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>gb|AC074354.8|AC074354 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0065C16, from Chromosome 10, complete sequence
          Length = 146391

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 206   tggatcatgcttctgttgacaagttcactgaaata 240
             ||||||||||||||||||| ||| ||| |||||||
Sbjct: 34476 tggatcatgcttctgttgataagctcattgaaata 34510
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 206     tggatcatgcttctgttgacaagttcactgaaata 240
               ||||||||||||||||||| ||| ||| |||||||
Sbjct: 8486314 tggatcatgcttctgttgataagctcattgaaata 8486280
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>gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 of 73 of the complete
              sequence
          Length = 585533

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 17     atgttcaaattcaggttatacat 39
              |||||||||||||||||||||||
Sbjct: 323591 atgttcaaattcaggttatacat 323569
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>gb|AC104328.10| Mus musculus strain C57BL/6J chromosome 18 clone rp23-352p20, complete
             sequence
          Length = 183187

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 225   caagttcactgaaataactctctgcttcttg 255
             |||||||| | ||||||||||||||||||||
Sbjct: 56188 caagttcattcaaataactctctgcttcttg 56218
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 206     tggatcatgcttctgttgacaagttcactgaaata 240
               ||||||||||||||||||| ||| ||| |||||||
Sbjct: 8491413 tggatcatgcttctgttgataagctcattgaaata 8491379
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>gb|AY850394.1| Lycopersicon esculentum cultivar Heinz1706 chromosome 12 centromeric
             region
          Length = 326112

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 391   ccaataaccaagtaacgatata 412
             ||||||||||||||||||||||
Sbjct: 30378 ccaataaccaagtaacgatata 30357
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>gb|DQ490470.1| Emericella nidulans alpha-glucosidase (AN0941-2) mRNA, complete cds
          Length = 2625

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 76   gcagcccaagcttatcaccat 96
            |||||||||||||||||||||
Sbjct: 1459 gcagcccaagcttatcaccat 1439
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>ref|XM_653453.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0941.2), mRNA
          Length = 2520

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 76   gcagcccaagcttatcaccat 96
            |||||||||||||||||||||
Sbjct: 1387 gcagcccaagcttatcaccat 1367
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>gb|AC105903.2| Homo sapiens chromosome 3 clone RP11-606H24, complete sequence
          Length = 186951

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 14     ccaatgttcaaattcaggttataca 38
              |||||||||||||||||| ||||||
Sbjct: 119823 ccaatgttcaaattcaggatataca 119847
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 206     tggatcatgcttctgttgacaagttcactgaaataactctc 246
               ||||||||||||||||| ||||| ||| |||| ||| ||||
Sbjct: 9980933 tggatcatgcttctgtttacaagatcattgaagtaattctc 9980973



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 206      tggatcatgcttctgttgacaagttcactgaa 237
                ||||||||||||||||| ||||| ||| ||||
Sbjct: 10010933 tggatcatgcttctgtttacaagatcattgaa 10010964



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 206     tggatcatgcttctgttgacaagttcactgaa 237
               ||||||||||||||||||| ||| ||| ||||
Sbjct: 5127235 tggatcatgcttctgttgataagctcattgaa 5127204
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 211      catgcttctgttgacaagttcactgaaataactctct 247
                ||||||||| || ||||| ||| ||||||||||||||
Sbjct: 13964138 catgcttctatttacaagctcattgaaataactctct 13964174
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>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1051E10
          Length = 207782

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 211    catgcttctgttgacaagttcactgaaataactctct 247
              ||||||||| || ||||| ||| ||||||||||||||
Sbjct: 124440 catgcttctatttacaagctcattgaaataactctct 124476
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>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0463A02
          Length = 151041

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 211   catgcttctgttgacaagttcactgaaataactctct 247
             ||||||||| || ||||| ||| ||||||||||||||
Sbjct: 39883 catgcttctatttacaagctcattgaaataactctct 39919
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>gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone mth2-85c24, complete
             sequence
          Length = 132817

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     tatctttcacaaccaatgttc 22
             |||||||||||||||||||||
Sbjct: 19142 tatctttcacaaccaatgttc 19122
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 206     tggatcatgcttctgttgacaagttcactgaaataactctc 246
               ||||||||||||||||| ||||| ||| |||| ||| ||||
Sbjct: 9980818 tggatcatgcttctgtttacaagatcattgaagtaattctc 9980858



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 206      tggatcatgcttctgttgacaagttcactgaa 237
                ||||||||||||||||| ||||| ||| ||||
Sbjct: 10010818 tggatcatgcttctgtttacaagatcattgaa 10010849



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 206     tggatcatgcttctgttgacaagttcactgaa 237
               ||||||||||||||||||| ||| ||| ||||
Sbjct: 5127217 tggatcatgcttctgttgataagctcattgaa 5127186
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>emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb0071E08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132906

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 206   tggatcatgcttctgttgacaagttcactgaaataactctc 246
             ||||||||||||||||| ||||| ||| |||| ||| ||||
Sbjct: 77141 tggatcatgcttctgtttacaagatcattgaagtaattctc 77101



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 206   tggatcatgcttctgttgacaagttcactgaa 237
             ||||||||||||||||| ||||| ||| ||||
Sbjct: 47141 tggatcatgcttctgtttacaagatcattgaa 47110
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>ref|XM_480344.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3057

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 338  tctggatatatacataagtacaacaaacaagt 369
            |||||| ||| || ||||||||||||||||||
Sbjct: 1304 tctggaaatacacttaagtacaacaaacaagt 1273
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>ref|XM_480290.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2934

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 199  aactagctggatcatgcttctgtt 222
            |||| |||||||||||||||||||
Sbjct: 1473 aactggctggatcatgcttctgtt 1450
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>ref|XM_425580.1| PREDICTED: Gallus gallus similar to Gamma-aminobutyric-acid receptor
            gamma-3 subunit precursor (GABA(A) receptor) (LOC428010),
            mRNA
          Length = 3033

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 173  tgctcaaagttgtcatcgtcaaca 196
            |||||||||||||||| |||||||
Sbjct: 2593 tgctcaaagttgtcatggtcaaca 2570
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>gb|AC125324.4| Mus musculus BAC clone RP23-284J23 from chromosome 1, complete sequence
          Length = 168982

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    agttgtcatcgtcaacatta 199
              ||||||||||||||||||||
Sbjct: 112726 agttgtcatcgtcaacatta 112707
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>emb|BX004847.31| Zebrafish DNA sequence from clone CH211-59C8 in linkage group 21,
              complete sequence
          Length = 179765

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     aggaaatacaatgacatggc 65
              ||||||||||||||||||||
Sbjct: 110013 aggaaatacaatgacatggc 110032
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>gb|AF538039.2| Triticum aestivum Mal-like protein mRNA, complete cds
          Length = 2855

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 338 tctggatatatacataagtacaacaaacaagt 369
           |||||||||||||||| |||||| | ||||||
Sbjct: 873 tctggatatatacataggtacaatagacaagt 842
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>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0029K08, complete sequence
          Length = 136687

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                      
Query: 338    tctggatatatacataagtacaacaaacaagtcttgaggt 377
              ||||||||||| | || |||||||| ||||||||| ||||
Sbjct: 135453 tctggatatatgcttaggtacaacatacaagtctttaggt 135414
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>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            B1356F10, complete sequence
          Length = 170681

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 338  tctggatatatacataagtacaacaaacaagtcttgaggt 377
            ||||||||||| | || |||||||| ||||||||| ||||
Sbjct: 1222 tctggatatatgcttaggtacaacatacaagtctttaggt 1183
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>emb|AL353689.26| Human DNA sequence from clone RP5-1087E8 on chromosome 1q42.11-42.2
             Contains the CABC1 gene for chaperone ABC1 activity of bc1
             complex like (S. pombe), a pseudogene similar to part of
             NADH dehydrogenase subunit 6 (ND6), a novel gene, the 3'
             end of the CDC42BPA gene for CDC42 binding protein kinase
             alpha (DMPK-like) and two CpG islands, complete sequence
          Length = 195829

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 76    gcagcccaagcttatcaccattta 99
             |||||||||||||||| |||||||
Sbjct: 73792 gcagcccaagcttatctccattta 73815
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>emb|AL162573.15| Human DNA sequence from clone RP11-275J18 on chromosome 13, complete
             sequence
          Length = 166509

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   tccatttccatttcacttct 316
             ||||||||||||||||||||
Sbjct: 52295 tccatttccatttcacttct 52314
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>emb|AL022067.1|HS134E15 Human DNA sequence from clone RP1-134E15 on chromosome 6q21 Contains
             the 3' part of the PRDM1 gene for PR domain containing 1
             with ZNF domain and the 3' part of the APG5L gene for APG5
             autophagy 5-like (S. cerevisiae), complete sequence
          Length = 177163

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    atgttcaaattcaggttata 36
             ||||||||||||||||||||
Sbjct: 80806 atgttcaaattcaggttata 80825
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>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ttaaatagtggcaaaattct 116
              ||||||||||||||||||||
Sbjct: 302278 ttaaatagtggcaaaattct 302297
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>gb|AC144374.5| Gallus gallus strain White Leghorn clone xx-37d21, complete sequence
          Length = 141874

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 303  tccatttcacttcttcacac 322
            ||||||||||||||||||||
Sbjct: 4776 tccatttcacttcttcacac 4795
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>gb|AC091818.2| Homo sapiens chromosome 5 clone CTC-204P14, complete sequence
          Length = 101854

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 441   aaccttggagtctctcccattcat 464
             |||||||||||||| |||||||||
Sbjct: 28104 aaccttggagtctcacccattcat 28081
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 338     tctggatatatacataagtacaacaaacaagt 369
               |||||| ||| || ||||||||||||||||||
Sbjct: 4476021 tctggaaatacacttaagtacaacaaacaagt 4475990



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 199     aactagctggatcatgcttctgtt 222
               |||| |||||||||||||||||||
Sbjct: 4130243 aactggctggatcatgcttctgtt 4130266
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 95      atttaaatagtggcaaaatt 114
               ||||||||||||||||||||
Sbjct: 9421770 atttaaatagtggcaaaatt 9421789
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>gb|DQ345781.1| Prunus mume self-incompatibility S-RNase (S) gene, S-13 allele,
           partial cds
          Length = 653

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 atatatacataagtacaaca 362
           ||||||||||||||||||||
Sbjct: 346 atatatacataagtacaaca 327
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>gb|AC012485.13| Homo sapiens BAC clone RP11-5O24 from 2, complete sequence
          Length = 168738

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    tcttgaggtggtgtggaaga 388
              ||||||||||||||||||||
Sbjct: 164263 tcttgaggtggtgtggaaga 164282
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>gb|AY853594.1| Prunus armeniaca S-RNase S9 gene, partial cds
          Length = 992

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 atatatacataagtacaaca 362
           ||||||||||||||||||||
Sbjct: 426 atatatacataagtacaaca 407
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>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1590_E05
          Length = 148205

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 199   aactagctggatcatgcttctgtt 222
             |||| |||||||||||||||||||
Sbjct: 29866 aactggctggatcatgcttctgtt 29889
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>dbj|AP003538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0059O19
          Length = 144386

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   atttaaatagtggcaaaatt 114
            ||||||||||||||||||||
Sbjct: 9392 atttaaatagtggcaaaatt 9411
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>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0038C05
          Length = 152941

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     atttaaatagtggcaaaatt 114
              ||||||||||||||||||||
Sbjct: 150180 atttaaatagtggcaaaatt 150199
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>dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0458D06
          Length = 166038

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 199    aactagctggatcatgcttctgtt 222
              |||| |||||||||||||||||||
Sbjct: 123356 aactggctggatcatgcttctgtt 123379
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>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0583B06
          Length = 134442

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 338   tctggatatatacataagtacaacaaacaagt 369
             |||||| ||| || ||||||||||||||||||
Sbjct: 41911 tctggaaatacacttaagtacaacaaacaagt 41880
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>gb|AC003998.1|AC003998 Human PAC clone RP1-161J9 from 5q31, complete sequence
          Length = 138965

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 441    aaccttggagtctctcccattcat 464
              |||||||||||||| |||||||||
Sbjct: 121850 aaccttggagtctcacccattcat 121827
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>dbj|AK066312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067O06, full
            insert sequence
          Length = 3978

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 338  tctggatatatacataagtacaacaaacaagtcttgaggt 377
            ||||||||||| | || |||||||| ||||||||| ||||
Sbjct: 2011 tctggatatatgcttaggtacaacatacaagtctttaggt 1972
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>gb|AC120410.11| Mus musculus chromosome 18, clone RP24-441C8, complete sequence
          Length = 178807

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    ctgtgcagcccaagcttatc 91
             ||||||||||||||||||||
Sbjct: 30672 ctgtgcagcccaagcttatc 30653
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>emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102_B11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 112231

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 206   tggatcatgcttctgttgacaagttcactgaa 237
             ||||||||||||||||||| ||| ||| ||||
Sbjct: 97888 tggatcatgcttctgttgataagctcattgaa 97857
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>gb|AC147968.2| Gallus gallus BAC clone CH261-119F24 from chromosome unknown, complete
              sequence
          Length = 209917

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    ctggatatatacataagtac 358
              ||||||||||||||||||||
Sbjct: 122892 ctggatatatacataagtac 122911
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>emb|AL805970.8| Mouse DNA sequence from clone RP23-438O3 on chromosome 4, complete
             sequence
          Length = 180421

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     atctttcacaaccaatgttc 22
             ||||||||||||||||||||
Sbjct: 27771 atctttcacaaccaatgttc 27752


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,050,110
Number of Sequences: 3902068
Number of extensions: 5050110
Number of successful extensions: 94875
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94376
Number of HSP's gapped (non-prelim): 499
length of query: 512
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 489
effective length of database: 17,143,297,704
effective search space: 8383072577256
effective search space used: 8383072577256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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