Clone Name | rbart34e05 |
---|---|
Clone Library Name | barley_pub |
>gb|U01963.1|HVU01963 Hordeum vulgare CM 72 germin subunit mRNA, complete cds Length = 1006 Score = 963 bits (486), Expect = 0.0 Identities = 486/486 (100%) Strand = Plus / Minus Query: 2 tgcaaaatgcaaactatattttttgacaaagatggcaataaaaggtagtacattcaattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 998 tgcaaaatgcaaactatattttttgacaaagatggcaataaaaggtagtacattcaattc 939 Query: 62 ctcgtattggttctgaagattaaaccatgaggctaacttattcaatttattacaactgca 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 ctcgtattggttctgaagattaaaccatgaggctaacttattcaatttattacaactgca 879 Query: 122 tgcgagattaaccggaagcttgaatacatgtcttctgctgagaatcattaaattttgcta 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 878 tgcgagattaaccggaagcttgaatacatgtcttctgctgagaatcattaaattttgcta 819 Query: 182 ccatgcatatacagaattatgcattgattatttaaggaaggctcccaggaattaaaaccc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 ccatgcatatacagaattatgcattgattatttaaggaaggctcccaggaattaaaaccc 759 Query: 242 agcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgccttggt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 agcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgccttggt 699 Query: 302 gagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 gagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgat 639 Query: 362 gccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 gccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaa 579 Query: 422 ctggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcaccaccctgga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 ctggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcaccaccctgga 519 Query: 482 gtagag 487 |||||| Sbjct: 518 gtagag 513
>gb|M21962.1|WHTGAMINA Triticum aestivum germin protein precursor, mRNA, complete cds Length = 1012 Score = 509 bits (257), Expect = e-141 Identities = 419/469 (89%), Gaps = 8/469 (1%) Strand = Plus / Minus Query: 27 acaaagatggcaataaaaggtagtacattcaattcctcgtattggttctga----agatt 82 ||||||| | |||||||| ||||||||||||||||||| |||||||||||| || | Sbjct: 974 acaaagacgacaataaaaagtagtacattcaattcctcatattggttctgatcgaaggct 915 Query: 83 aaaccatgaggctaacttattcaat-ttattaca--actgcatgcgagattaaccggaag 139 | |||||||||||||||| |||||| |||||||| ||| ||||||||||||||| ||| Sbjct: 914 acaccatgaggctaacttgttcaatcttattacacgactacatgcgagattaacctgaaa 855 Query: 140 cttgaatacatgtcttctgctgagaatcattaaattttgctaccatgcatatacagaatt 199 ||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||| Sbjct: 854 cttgaatacatgtcttctggtgagaattattaaattttgctagcatgcatatatggaatt 795 Query: 200 atgcattgattattt-aaggaaggctcccaggaattaaaacccagcggcgaacttggact 258 || | | || |||| | |||||||||| || ||||||||||||||||| |||||||||| Sbjct: 794 atataattatcatttcagggaaggctcctagaaattaaaacccagcggcaaacttggact 735 Query: 259 tgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggcgtcggga 318 |||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 734 tgagaagttccacgaccctggcctccacccggagtgccttggtgagcaccggcgttggga 675 Query: 319 taggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttttggctgt 378 | |||||||| ||||||||||||||||| ||||| ||||| ||||| ||||| ||||||| Sbjct: 674 tgggcgggttggagccgaagagcgtgaggggcacgaagacaatgccggggttctggctgt 615 Query: 379 tgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagtgcatgaggc 438 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 614 tgaaggagacgaccatggaggcctcggtcttaccgacgttgaactggaagtgcatgaggc 555 Query: 439 cacgggggatgaggaaggtctctccagcgcgcaccaccctggagtagag 487 | || ||||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 554 cccgtgggatgaggaacgtctctccggcgcgcaccaccctcgagtagag 506
>gb|M63223.1|WHTGERMIN Wheat germin 9f-2.8 gene, complete cds Length = 2822 Score = 509 bits (257), Expect = e-141 Identities = 419/469 (89%), Gaps = 8/469 (1%) Strand = Plus / Minus Query: 27 acaaagatggcaataaaaggtagtacattcaattcctcgtattggttctga----agatt 82 ||||||| | |||||||| ||||||||||||||||||| |||||||||||| || | Sbjct: 2687 acaaagacgacaataaaaagtagtacattcaattcctcatattggttctgatcgaaggct 2628 Query: 83 aaaccatgaggctaacttattcaat-ttattaca--actgcatgcgagattaaccggaag 139 | |||||||||||||||| |||||| |||||||| ||| ||||||||||||||| ||| Sbjct: 2627 acaccatgaggctaacttgttcaatcttattacacgactacatgcgagattaacctgaaa 2568 Query: 140 cttgaatacatgtcttctgctgagaatcattaaattttgctaccatgcatatacagaatt 199 ||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||| Sbjct: 2567 cttgaatacatgtcttctggtgagaattattaaattttgctagcatgcatatatggaatt 2508 Query: 200 atgcattgattattt-aaggaaggctcccaggaattaaaacccagcggcgaacttggact 258 || | | || |||| | |||||||||| || ||||||||||||||||| |||||||||| Sbjct: 2507 atataattatcatttcagggaaggctcctagaaattaaaacccagcggcaaacttggact 2448 Query: 259 tgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggcgtcggga 318 |||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 2447 tgagaagttccacgaccctggcctccacccggagtgccttggtgagcaccggcgttggga 2388 Query: 319 taggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttttggctgt 378 | |||||||| ||||||||||||||||| ||||| ||||| ||||| ||||| ||||||| Sbjct: 2387 tgggcgggttggagccgaagagcgtgaggggcacgaagacaatgccggggttctggctgt 2328 Query: 379 tgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagtgcatgaggc 438 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2327 tgaaggagacgaccatggaggcctcggtcttaccgacgttgaactggaagtgcatgaggc 2268 Query: 439 cacgggggatgaggaaggtctctccagcgcgcaccaccctggagtagag 487 | || ||||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 2267 cccgtgggatgaggaacgtctctccggcgcgcaccaccctcgagtagag 2219
>gb|M63224.1|WHTGERMINA Wheat germin 9f-3.8 gene, complete cds Length = 3761 Score = 454 bits (229), Expect = e-124 Identities = 401/453 (88%), Gaps = 4/453 (0%) Strand = Plus / Minus Query: 38 aataaaaggtagtacatt-caattcctcgtattggttctgaagattaaaccatgaggcta 96 ||||||| | |||||||| |||||| |||||||||||| |||| | ||| |||| || Sbjct: 2189 aataaaaagcagtacatttcaattcatcgtattggttccgaaggctgaactgcgaggtta 2130 Query: 97 acttattcaat-ttattacaactgcatgcgagattaaccggaagcttgaatacatgtctt 155 ||||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 2129 acttattcaatcttattacaactgcatg-gagcttaaccagaagcttgaatacatgtctt 2071 Query: 156 ctgctgagaatcattaaattttgctaccatgcatatacagaattatgcattgattattta 215 ||| |||||||||||| |||||||| |||||||||| ||||||| |||||| |||| Sbjct: 2070 ctgtggagaatcattaatttttgctagcatgcatatatcgaattatatattgatcatttc 2011 Query: 216 aggaa-ggctcccaggaattaaaacccagcggcgaacttggacttgagaagttccacgac 274 ||| |||||||||||||||| ||||| | ||||||||||| ||||||||||||||||| Sbjct: 2010 agggctggctcccaggaattaagacccaccagcgaacttggatttgagaagttccacgac 1951 Query: 275 ccctgcctccacccggagcgccttggtgagcaccggcgtcgggataggcgggtttgagcc 334 ||| |||||||||||||| ||||||||||||||||| | ||||| |||||||| ||||| Sbjct: 1950 cccagcctccacccggagagccttggtgagcaccggtttggggatgggcgggttggagcc 1891 Query: 335 gaagagcgtgagcggcacaaagacgatgccagggttttggctgttgaaggagacgaccat 394 |||||||||||| ||||| ||||||| || ||| | |||||||||||| |||||||||| Sbjct: 1890 gaagagcgtgagtggcacgaagacgacgctggggctctggctgttgaagaagacgaccat 1831 Query: 395 ggaggcctccgtcttaccgacgttgaactggaagtgcatgaggccacgggggatgaggaa 454 |||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 1830 ggaggcctccgtcttaccgacgttgaactggaagtgcatgagcccgcgcgggatgaggaa 1771 Query: 455 ggtctctccagcgcgcaccaccctggagtagag 487 |||||||||||||||||||||||||||||||| Sbjct: 1770 cgtctctccagcgcgcaccaccctggagtagag 1738
>emb|Y09916.1|TAPSBGER2 T.aestivum mRNA for germin-like protein 2, partial Length = 764 Score = 367 bits (185), Expect = 2e-98 Identities = 239/257 (92%) Strand = Plus / Minus Query: 231 aattaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccgg 290 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 508 aattaaaacccagcggcgaacttggacttgagtagttccacgaccccggcctccacccgg 449 Query: 291 agcgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggc 350 ||||||||||||||||||||||| ||||| || || || |||||||||||| |||| ||| Sbjct: 448 agcgccttggtgagcaccggcgttgggatgggtggattggagccgaagagcatgagtggc 389 Query: 351 acaaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtctta 410 || ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 388 acgaagacgatgccggggttctggctgttgaaggagacgaccatggaggcctcggtctta 329 Query: 411 ccgacgttgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgc 470 || |||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 328 ccaacgttgaactggaagtgcatgaggccgcgtgggatgaggaacgtctccccagcgcgc 269 Query: 471 accaccctggagtagag 487 ||||||||||||||||| Sbjct: 268 accaccctggagtagag 252 Score = 137 bits (69), Expect = 4e-29 Identities = 147/169 (86%), Gaps = 3/169 (1%) Strand = Plus / Minus Query: 27 acaaagatggcaataaaaggtagtacattcaattcctcgtattggttctgaagattaaac 86 ||||||| | |||||||| | ||||||| ||||||| | |||||| ||||||| | ||| Sbjct: 701 acaaagacgacaataaaaagaagtacatacaattccccatattggatctgaaggcttaac 642 Query: 87 catgaggctaacttattcaat-ttattacaactgcatgcgagattaaccggaagcttgaa 145 |||| |||||||||||||||| ||||||||| ||||||||||||||||| | ||||||| Sbjct: 641 catggggctaacttattcaatcttattacaattgcatgcgagattaacccggagcttgag 582 Query: 146 tacatgtcttctgctg-agaatcattaaa-ttttgctaccatgcatata 192 |||||||||| ||||| ||||| |||||| |||||||| |||||||||| Sbjct: 581 tacatgtcttttgctgaagaattattaaatttttgctagcatgcatata 533
>emb|Y09917.1|TAPSBGER3 T.aestivum mRNA for germin-like protein 3 Length = 1027 Score = 365 bits (184), Expect = 9e-98 Identities = 334/380 (87%), Gaps = 8/380 (2%) Strand = Plus / Minus Query: 112 tacaactgcatgcgagattaaccggaagcttgaatacatgtcttctgctgagaatcatta 171 |||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 855 tacaactgcatg-gagcttaaccagaagcttgaatacatgtcttctgcagagaatcatta 797 Query: 172 aattttgctaccatgcatatacagaattatgcattgattatttaaggaa-ggctcccagg 230 ||||| || | |||||||||| ||||||| |||||| |||| ||| |||||||||| Sbjct: 796 aatttcgccagcatgcatatatcgaattatatattgatcatttcagggctggctcccagg 737 Query: 231 aattaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccgg 290 |||||| ||||| | ||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 736 aattaagacccaccagcgaagttggatttgagaagttccacgaccccagcctccacccgg 677 Query: 291 agcgccttggtgagcaccggcgtcgggataggcgggtttgagccgaaga---gcgtgagc 347 || ||||||||||||||||| || ||||| |||||||| || ||||||| |||||||| Sbjct: 676 agagccttggtgagcaccggtgtggggatgggcgggttggatccgaagaagagcgtgagc 617 Query: 348 ggcacaaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtc 407 || |||||||| || ||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 616 ---acgaagacgattccggggttctggctgttgaaggagacgaccatggaggcatgtgtc 560 Query: 408 ttaccgacgttgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcg 467 ||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 559 ttaccgacgttgaactggaagtgcatgagcccgcgtgggatgaggaacgtctctccagca 500 Query: 468 cgcaccaccctggagtagag 487 |||||||||||||||||||| Sbjct: 499 cgcaccaccctggagtagag 480
>emb|Y14203.1|HVY14203 Hordeum vulgare mRNA for oxalate oxidase (HvOxOa) Length = 970 Score = 315 bits (159), Expect = 7e-83 Identities = 231/255 (90%) Strand = Plus / Minus Query: 233 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggag 292 |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 767 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 708 Query: 293 cgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcac 352 ||||||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| Sbjct: 707 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 648 Query: 353 aaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttacc 412 ||||||||||||||||| |||||||||||||| || |||||| |||| ||||||||||| Sbjct: 647 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 588 Query: 413 gacgttgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcac 472 |||||||||||||||||||||||||| || ||||||| ||| |||||||| || ||||| Sbjct: 587 aacgttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcac 528 Query: 473 caccctggagtagag 487 ||||||||||||||| Sbjct: 527 caccctggagtagag 513
>gb|L15737.1|BLYGERMIN Barley germin mRNA, partial cds Length = 603 Score = 305 bits (154), Expect = 7e-80 Identities = 226/250 (90%) Strand = Plus / Minus Query: 238 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 297 ||||| ||||||||||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 601 acccaccggcgaacttggacttgagaagttccacgactccggcctccacccggagagcct 542 Query: 298 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 357 |||||||||| ||||| ||||| || |||| ||||||||||| ||||||||||| |||| Sbjct: 541 tggtgagcacgggcgtggggatgggagggtcggagccgaagagtgtgagcggcacgaaga 482 Query: 358 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 417 ||||||||||||| |||||||||||||| || |||||| |||| ||||||||||| |||| Sbjct: 481 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 422 Query: 418 tgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcaccaccc 477 |||||||||||||||||||||| || ||||||| ||| |||||||| || |||||||||| Sbjct: 421 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccaccc 362 Query: 478 tggagtagag 487 |||||||||| Sbjct: 361 tggagtagag 352
>emb|AJ556991.1|TAE556991 Triticum aestivum mRNA for oxalate oxidase precursor (OXO1 gene) Length = 675 Score = 285 bits (144), Expect = 7e-74 Identities = 225/252 (89%) Strand = Plus / Minus Query: 233 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggag 292 ||||||||||||||| ||||||||||| |||||||| |||||||| |||||||||| || Sbjct: 675 ttaaaacccagcggcaaacttggacttcagaagttcgacgaccccggcctccacccttag 616 Query: 293 cgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcac 352 |||||||||||||||||||||||||| || ||||| |||| |||||| || | ||||| Sbjct: 615 agccttggtgagcaccggcgtcgggatgggtgggttggagctgaagagtgtcaatggcac 556 Query: 353 aaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttacc 412 |||||||| || ||||| ||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 555 gaagacgataccggggttctggctgttgaaggagactaccatggatgcctcggtcttacc 496 Query: 413 gacgttgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcac 472 |||||||||||| |||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 495 gacgttgaactgcaagtgcatgaggccccgtgggatgaggaacgtctctccagcgcgcac 436 Query: 473 caccctggagta 484 |||||| ||||| Sbjct: 435 caccctcgagta 424
>emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase 4 (oxO4 gene) Length = 828 Score = 283 bits (143), Expect = 3e-73 Identities = 224/251 (89%) Strand = Plus / Minus Query: 234 taaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagc 293 |||||||| ||||| ||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 671 taaaaccctgcggcaaacttggacttgagaagttccacgaccccagcatccacacggagc 612 Query: 294 gccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcaca 353 |||||||||||||||||||||||||| || ||||| || ||||||| ||||| |||||| Sbjct: 611 gccttggtgagcaccggcgtcgggatcggtgggttggaaccgaagactgtgagtggcaca 552 Query: 354 aagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccg 413 ||||||||||| ||||| |||||||||||||| || |||||||| ||||||||||| || Sbjct: 551 aagacgatgcctgggttctggctgttgaaggacacaaccatggatgcctccgtcttgcca 492 Query: 414 acgttgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcacc 473 ||||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| |||| | Sbjct: 491 acgttgaactgaaagtgcatgagcccacgcgggatgaggaatgtctcaccagcacgcaac 432 Query: 474 accctggagta 484 ||| ||||||| Sbjct: 431 accttggagta 421
>emb|Y09918.1|TAPSBGER4 T.aestivum mRNA for germin-like protein 4, partial Length = 572 Score = 281 bits (142), Expect = 1e-72 Identities = 235/266 (88%) Strand = Plus / Minus Query: 222 gctcccaggaattaaaacccagcggcgaacttggacttgagaagttccacgacccctgcc 281 ||||||||| ||||| ||||| | ||||||||||||||||||||||| |||||||| ||| Sbjct: 332 gctcccagggattaagacccaccagcgaacttggacttgagaagttcgacgaccccggcc 273 Query: 282 tccacccggagcgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagc 341 ||||||| || |||||||||||||||||||| ||||| |||||||| || ||||||||| Sbjct: 272 tccacccttagtgccttggtgagcaccggcgtggggattggcgggttggaaccgaagagc 213 Query: 342 gtgagcggcacaaagacgatgccagggttttggctgttgaaggagacgaccatggaggcc 401 |||||||||| || |||||||| ||||| || ||||||||||| || |||||| ||||| Sbjct: 212 atgagcggcacgaaaacgatgccggggttctgtctgttgaaggaaacaaccatgtaggcc 153 Query: 402 tccgtcttaccgacgttgaactggaagtgcatgaggccacgggggatgaggaaggtctct 461 || |||||||| ||||||||||||||||||||||| || || ||||||||||| |||||| Sbjct: 152 tctgtcttaccaacgttgaactggaagtgcatgagcccgcgtgggatgaggaacgtctct 93 Query: 462 ccagcgcgcaccaccctggagtagag 487 ||||| | ||||||||| |||||||| Sbjct: 92 ccagcacacaccaccctagagtagag 67 Score = 113 bits (57), Expect = 5e-22 Identities = 94/105 (89%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 59 ttcctcgtattggttctgaagattaaaccatgaggctaacttattcaat-ttattacaac 117 ||||||||||||| ||||||| |||||| |||||||||||||||||| |||||||||| Sbjct: 498 ttcctcgtattggctctgaaggctaaaccgcgaggctaacttattcaatcttattacaac 439 Query: 118 tgcatgcgagattaaccggaagcttgaatacatgtcttctgctga 162 |||||||||| ||| | ||||||||||||| ||||||||||||| Sbjct: 438 tgcatgcgagcttagctagaagcttgaatacgtgtcttctgctga 394
>emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase 2 (oxO2 gene) Length = 867 Score = 268 bits (135), Expect = 2e-68 Identities = 222/251 (88%) Strand = Plus / Minus Query: 234 taaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagc 293 |||||||| ||||| ||||||||||||||||||||||||||||| || ||| | |||||| Sbjct: 671 taaaaccctgcggcaaacttggacttgagaagttccacgaccccagcatccgcacggagc 612 Query: 294 gccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcaca 353 |||||||||||||||||||||||||| || ||||| || ||||||| ||||| |||||| Sbjct: 611 gccttggtgagcaccggcgtcgggatcggtgggttggaaccgaagactgtgagtggcaca 552 Query: 354 aagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccg 413 ||||||||||| ||||| |||||||||||||| || |||||||| ||||||||||| || Sbjct: 551 aagacgatgcctgggttctggctgttgaaggacacaaccatggatgcctccgtcttgcca 492 Query: 414 acgttgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcacc 473 ||||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| ||| | Sbjct: 491 acgttgaactgaaagtgcatgagcccacgcgggatgaggaatgtctcaccagcacgcgac 432 Query: 474 accctggagta 484 ||| ||||||| Sbjct: 431 accttggagta 421
>emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate oxidase (oxO1 gene) Length = 934 Score = 244 bits (123), Expect = 2e-61 Identities = 222/255 (87%) Strand = Plus / Minus Query: 233 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggag 292 |||||||||| |||| ||||| |||||||||||||| |||||||| || ||||| ||||| Sbjct: 777 ttaaaacccaccggcaaacttagacttgagaagttctacgaccccggcatccacacggag 718 Query: 293 cgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcac 352 |||||||||||| || | ||| ||||| || ||||| ||||| |||| ||||| ||||| Sbjct: 717 cgccttggtgagtacggccgtggggattggtgggttggagccaaagacggtgagtggcac 658 Query: 353 aaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttacc 412 |||||||||||||||||| ||||| |||||||| ||||||||||| ||||| ||||| || Sbjct: 657 aaagacgatgccagggttctggctattgaaggatacgaccatggaagcctctgtcttgcc 598 Query: 413 gacgttgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcac 472 |||||||| |||||||||||||| ||||| ||||||||||| ||||||||||| |||| Sbjct: 597 aacgttgaattggaagtgcatgagcccacgcgggatgaggaacgtctctccagcacgcag 538 Query: 473 caccctggagtagag 487 |||| |||| ||||| Sbjct: 537 caccttggaatagag 523
>emb|AJ504848.1|LPE504848 Lolium perenne mRNA for oxalate oxidase (oxo3 gene) Length = 868 Score = 234 bits (118), Expect = 2e-58 Identities = 222/257 (86%) Strand = Plus / Minus Query: 231 aattaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccgg 290 ||||| ||||| || || ||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 674 aattagaaccctgcagcaaacttggacttgagaagttccacgaccccagcgtccacacgg 615 Query: 291 agcgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggc 350 || |||||||||||||| ||||| ||||| ||||| || || ||||||| |||||| ||| Sbjct: 614 agtgccttggtgagcacgggcgtagggatcggcggattggaaccgaagaccgtgagaggc 555 Query: 351 acaaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtctta 410 || ||||||||||| ||||| ||||| |||||||| || |||||||| ||||||||||| Sbjct: 554 acgaagacgatgcctgggttctggctattgaaggacacaaccatggatgcctccgtcttg 495 Query: 411 ccgacgttgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgc 470 || ||||||||||||||||||||||| || || ||||||||||| ||||| ||||| ||| Sbjct: 494 ccaacgttgaactggaagtgcatgagcccgcgcgggatgaggaacgtctcaccagcacgc 435 Query: 471 accaccctggagtagag 487 | ||| | |||||||| Sbjct: 434 anaacctttgagtagag 418
>ref|XM_469349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 230 bits (116), Expect = 3e-57 Identities = 215/248 (86%) Strand = Plus / Minus Query: 238 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 297 ||||| ||| |||||||||||| || || || ||||| || || |||||||||||||||| Sbjct: 679 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 620 Query: 298 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 357 || |||||||||||||||||| || ||||| |||||||| | |||||||| || |||| Sbjct: 619 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 560 Query: 358 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 417 ||||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||| Sbjct: 559 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 500 Query: 418 tgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcaccaccc 477 ||||||||||||||||||| || || ||||||| ||| ||||| || |||| ||||||| Sbjct: 499 tgaactggaagtgcatgagcccccgcgggatgacgaacgtctcgccgccgcggaccaccc 440 Query: 478 tggagtag 485 |||||||| Sbjct: 439 tggagtag 432
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 230 bits (116), Expect = 3e-57 Identities = 215/248 (86%) Strand = Plus / Plus Query: 238 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 297 ||||| ||| |||||||||||| || || || ||||| || || |||||||||||||||| Sbjct: 27487933 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 27487992 Query: 298 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 357 || |||||||||||||||||| || ||||| |||||||| | |||||||| || |||| Sbjct: 27487993 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 27488052 Query: 358 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 417 ||||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||| Sbjct: 27488053 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 27488112 Query: 418 tgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcaccaccc 477 ||||||||||||||||||| || || ||||||| ||| ||||| || |||| ||||||| Sbjct: 27488113 tgaactggaagtgcatgagcccccgcgggatgacgaacgtctcgccgccgcggaccaccc 27488172 Query: 478 tggagtag 485 |||||||| Sbjct: 27488173 tggagtag 27488180 Score = 170 bits (86), Expect = 3e-39 Identities = 197/234 (84%) Strand = Plus / Plus Query: 252 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 311 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 27499871 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 27499930 Query: 312 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 371 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 27499931 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 27499990 Query: 372 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagtgc 431 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||||| Sbjct: 27499991 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagtgc 27500050 Query: 432 atgaggccacgggggatgaggaaggtctctccagcgcgcaccaccctggagtag 485 ||||| || | ||||||| ||| ||||| || || || |||||| |||||||| Sbjct: 27500051 atgagccccctcgggatgacgaacgtctcgccggcacggaccaccttggagtag 27500104 Score = 170 bits (86), Expect = 3e-39 Identities = 197/234 (84%) Strand = Plus / Plus Query: 252 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 311 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 27496890 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 27496949 Query: 312 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 371 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 27496950 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 27497009 Query: 372 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagtgc 431 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||||| Sbjct: 27497010 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagtgc 27497069 Query: 432 atgaggccacgggggatgaggaaggtctctccagcgcgcaccaccctggagtag 485 ||||| || | ||||||| ||| ||||| || || || |||||| |||||||| Sbjct: 27497070 atgagccccctcgggatgacgaacgtctcgccggcacggaccaccttggagtag 27497123 Score = 149 bits (75), Expect = 1e-32 Identities = 120/135 (88%) Strand = Plus / Plus Query: 302 gagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgat 361 |||||||||||||||||| |||||||| ||||| || | |||||||| || |||||||| Sbjct: 27492601 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 27492660 Query: 362 gccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaa 421 ||||||||| || ||||||||||| || ||||||| |||||||||||| ||||| ||||| Sbjct: 27492661 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 27492720 Query: 422 ctggaagtgcatgag 436 ||||||||||||||| Sbjct: 27492721 ctggaagtgcatgag 27492735
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 230 bits (116), Expect = 3e-57 Identities = 215/248 (86%) Strand = Plus / Plus Query: 238 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 297 ||||| ||| |||||||||||| || || || ||||| || || |||||||||||||||| Sbjct: 27579256 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 27579315 Query: 298 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 357 || |||||||||||||||||| || ||||| |||||||| | |||||||| || |||| Sbjct: 27579316 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 27579375 Query: 358 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 417 ||||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||| Sbjct: 27579376 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 27579435 Query: 418 tgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcaccaccc 477 ||||||||||||||||||| || || ||||||| ||| ||||| || |||| ||||||| Sbjct: 27579436 tgaactggaagtgcatgagcccccgcgggatgacgaacgtctcgccgccgcggaccaccc 27579495 Query: 478 tggagtag 485 |||||||| Sbjct: 27579496 tggagtag 27579503 Score = 170 bits (86), Expect = 3e-39 Identities = 197/234 (84%) Strand = Plus / Plus Query: 252 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 311 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 27591194 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 27591253 Query: 312 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 371 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 27591254 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 27591313 Query: 372 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagtgc 431 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||||| Sbjct: 27591314 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagtgc 27591373 Query: 432 atgaggccacgggggatgaggaaggtctctccagcgcgcaccaccctggagtag 485 ||||| || | ||||||| ||| ||||| || || || |||||| |||||||| Sbjct: 27591374 atgagccccctcgggatgacgaacgtctcgccggcacggaccaccttggagtag 27591427 Score = 170 bits (86), Expect = 3e-39 Identities = 197/234 (84%) Strand = Plus / Plus Query: 252 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 311 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 27588213 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 27588272 Query: 312 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 371 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 27588273 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 27588332 Query: 372 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagtgc 431 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||||| Sbjct: 27588333 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagtgc 27588392 Query: 432 atgaggccacgggggatgaggaaggtctctccagcgcgcaccaccctggagtag 485 ||||| || | ||||||| ||| ||||| || || || |||||| |||||||| Sbjct: 27588393 atgagccccctcgggatgacgaacgtctcgccggcacggaccaccttggagtag 27588446 Score = 149 bits (75), Expect = 1e-32 Identities = 120/135 (88%) Strand = Plus / Plus Query: 302 gagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgat 361 |||||||||||||||||| |||||||| ||||| || | |||||||| || |||||||| Sbjct: 27583924 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 27583983 Query: 362 gccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaa 421 ||||||||| || ||||||||||| || ||||||| |||||||||||| ||||| ||||| Sbjct: 27583984 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 27584043 Query: 422 ctggaagtgcatgag 436 ||||||||||||||| Sbjct: 27584044 ctggaagtgcatgag 27584058
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 230 bits (116), Expect = 3e-57 Identities = 215/248 (86%) Strand = Plus / Minus Query: 238 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 297 ||||| ||| |||||||||||| || || || ||||| || || |||||||||||||||| Sbjct: 62581 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 62522 Query: 298 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 357 || |||||||||||||||||| || ||||| |||||||| | |||||||| || |||| Sbjct: 62521 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 62462 Query: 358 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 417 ||||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||| Sbjct: 62461 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 62402 Query: 418 tgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcaccaccc 477 ||||||||||||||||||| || || ||||||| ||| ||||| || |||| ||||||| Sbjct: 62401 tgaactggaagtgcatgagcccccgcgggatgacgaacgtctcgccgccgcggaccaccc 62342 Query: 478 tggagtag 485 |||||||| Sbjct: 62341 tggagtag 62334 Score = 170 bits (86), Expect = 3e-39 Identities = 197/234 (84%) Strand = Plus / Minus Query: 252 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 311 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 53624 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 53565 Query: 312 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 371 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 53564 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 53505 Query: 372 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagtgc 431 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||||| Sbjct: 53504 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagtgc 53445 Query: 432 atgaggccacgggggatgaggaaggtctctccagcgcgcaccaccctggagtag 485 ||||| || | ||||||| ||| ||||| || || || |||||| |||||||| Sbjct: 53444 atgagccccctcgggatgacgaacgtctcgccggcacggaccaccttggagtag 53391 Score = 170 bits (86), Expect = 3e-39 Identities = 197/234 (84%) Strand = Plus / Minus Query: 252 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 311 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 50643 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 50584 Query: 312 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 371 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 50583 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 50524 Query: 372 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagtgc 431 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||||| Sbjct: 50523 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagtgc 50464 Query: 432 atgaggccacgggggatgaggaaggtctctccagcgcgcaccaccctggagtag 485 ||||| || | ||||||| ||| ||||| || || || |||||| |||||||| Sbjct: 50463 atgagccccctcgggatgacgaacgtctcgccggcacggaccaccttggagtag 50410 Score = 149 bits (75), Expect = 1e-32 Identities = 120/135 (88%) Strand = Plus / Minus Query: 302 gagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgat 361 |||||||||||||||||| |||||||| ||||| || | |||||||| || |||||||| Sbjct: 57913 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 57854 Query: 362 gccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaa 421 ||||||||| || ||||||||||| || ||||||| |||||||||||| ||||| ||||| Sbjct: 57853 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 57794 Query: 422 ctggaagtgcatgag 436 ||||||||||||||| Sbjct: 57793 ctggaagtgcatgag 57779
>dbj|AK103716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137P21, full insert sequence Length = 998 Score = 230 bits (116), Expect = 3e-57 Identities = 215/248 (86%) Strand = Plus / Minus Query: 238 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 297 ||||| ||| |||||||||||| || || || ||||| || || |||||||||||||||| Sbjct: 805 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 746 Query: 298 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 357 || |||||||||||||||||| || ||||| |||||||| | |||||||| || |||| Sbjct: 745 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 686 Query: 358 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 417 ||||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||| Sbjct: 685 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 626 Query: 418 tgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcaccaccc 477 ||||||||||||||||||| || || ||||||| ||| ||||| || |||| ||||||| Sbjct: 625 tgaactggaagtgcatgagcccccgcgggatgacgaacgtctcgccgccgcggaccaccc 566 Query: 478 tggagtag 485 |||||||| Sbjct: 565 tggagtag 558
>emb|Y09915.1|TAPSBGER1 T.aestivum mRNA for germin-like protein 1 Length = 856 Score = 224 bits (113), Expect = 2e-55 Identities = 224/257 (87%), Gaps = 3/257 (1%) Strand = Plus / Minus Query: 233 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctg-cctccacccgga 291 |||||||||| | |||||||||||||||| |||||| |||||||||| |||| | || | Sbjct: 762 ttaaaacccaccagcgaacttggacttgaaaagttcgacgacccctggcctctatcctta 703 Query: 292 gcgccttggtgagcaccggcgtcgggataggc-gggtttgagccgaagagcgtgagcggc 350 |||||||||||||||||||||| ||||| ||| ||||| || ||||| | ||||||||| Sbjct: 702 gcgccttggtgagcaccggcgt-gggattggccgggttggaaccgaaaaaagtgagcggc 644 Query: 351 acaaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtctta 410 || || || ||||| ||||| |||||||||||||| || |||||| |||| ||||||||| Sbjct: 643 acgaaaacaatgccggggttctggctgttgaaggaaacaaccatgtaggcttccgtctta 584 Query: 411 ccgacgttgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgc 470 || ||| ||||||||||||||||||| || || ||||||||||| ||||||||||| ||| Sbjct: 583 ccaacgatgaactggaagtgcatgagcccgcgcgggatgaggaacgtctctccagcacgc 524 Query: 471 accaccctggagtagag 487 ||||||||||||||||| Sbjct: 523 accaccctggagtagag 507
>ref|XM_469352.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 170 bits (86), Expect = 3e-39 Identities = 197/234 (84%) Strand = Plus / Minus Query: 252 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 311 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 807 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 748 Query: 312 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 371 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 747 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 688 Query: 372 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagtgc 431 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||||| Sbjct: 687 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagtgc 628 Query: 432 atgaggccacgggggatgaggaaggtctctccagcgcgcaccaccctggagtag 485 ||||| || | ||||||| ||| ||||| || || || |||||| |||||||| Sbjct: 627 atgagccccctcgggatgacgaacgtctcgccggcacggaccaccttggagtag 574
>ref|XM_469351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 170 bits (86), Expect = 3e-39 Identities = 197/234 (84%) Strand = Plus / Minus Query: 252 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 311 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 665 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 606 Query: 312 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 371 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 605 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 546 Query: 372 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagtgc 431 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||||| Sbjct: 545 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagtgc 486 Query: 432 atgaggccacgggggatgaggaaggtctctccagcgcgcaccaccctggagtag 485 ||||| || | ||||||| ||| ||||| || || || |||||| |||||||| Sbjct: 485 atgagccccctcgggatgacgaacgtctcgccggcacggaccaccttggagtag 432
>dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F02, full insert sequence Length = 1028 Score = 170 bits (86), Expect = 3e-39 Identities = 197/234 (84%) Strand = Plus / Minus Query: 252 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 311 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 818 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 759 Query: 312 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 371 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 758 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 699 Query: 372 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagtgc 431 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||||| Sbjct: 698 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagtgc 639 Query: 432 atgaggccacgggggatgaggaaggtctctccagcgcgcaccaccctggagtag 485 ||||| || | ||||||| ||| ||||| || || || |||||| |||||||| Sbjct: 638 atgagccccctcgggatgacgaacgtctcgccggcacggaccaccttggagtag 585
>gb|AY108860.1| Zea mays PCO074541 mRNA sequence Length = 589 Score = 167 bits (84), Expect = 4e-38 Identities = 195/232 (84%) Strand = Plus / Minus Query: 238 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 297 ||||| |||||||||||||||||| || |||||||| | || |||||||||||||||| Sbjct: 242 acccaccggcgaacttggacttgatgagatccacgacactggcgtccacccggagcgcct 183 Query: 298 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 357 ||| |||||||||||| ||||| ||||| |||||||| |||||||| ||||| |||| Sbjct: 182 tggagagcaccggcgtggggatcggcggagaggagccgaacagcgtgaggggcacgaaga 123 Query: 358 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 417 |||||| || || ||||||||||| || || ||||||| ||| ||| ||| ||||||| Sbjct: 122 tgatgcccggtttctggctgttgaacgacaccaccatggtggcgtcctccttgccgacgt 63 Query: 418 tgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcg 469 ||||||||||||||| |||||| || ||||||| ||| ||||| || ||||| Sbjct: 62 tgaactggaagtgcacgaggccgcgcgggatgacgaacgtctccccggcgcg 11
>gb|AF261942.1|AF261942 Zea mays clone AW042316 germin-like protein 2 (GLP2) mRNA, partial cds Length = 591 Score = 155 bits (78), Expect = 2e-34 Identities = 171/202 (84%) Strand = Plus / Minus Query: 238 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 297 ||||| |||||||||||||||||| || |||||||| | || |||||||||||||||| Sbjct: 211 acccaccggcgaacttggacttgatgagatccacgacactggcgtccacccggagcgcct 152 Query: 298 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 357 ||| |||||||||||| ||||| ||||| |||||||| |||||||| ||||| |||| Sbjct: 151 tggagagcaccggcgtggggatcggcggagaggagccgaacagcgtgaggggcacgaaga 92 Query: 358 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 417 |||||| || || ||||||||||| || || ||||||| ||| ||| ||| ||||||| Sbjct: 91 tgatgcccggtttctggctgttgaacgacaccaccatggtggcgtcctccttgccgacgt 32 Query: 418 tgaactggaagtgcatgaggcc 439 ||||||||||||||| |||||| Sbjct: 31 tgaactggaagtgcacgaggcc 10
>ref|XM_469350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 149 bits (75), Expect = 1e-32 Identities = 120/135 (88%) Strand = Plus / Minus Query: 302 gagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgat 361 |||||||||||||||||| |||||||| ||||| || | |||||||| || |||||||| Sbjct: 621 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 562 Query: 362 gccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaa 421 ||||||||| || ||||||||||| || ||||||| |||||||||||| ||||| ||||| Sbjct: 561 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 502 Query: 422 ctggaagtgcatgag 436 ||||||||||||||| Sbjct: 501 ctggaagtgcatgag 487
>gb|AC112926.7| Mus musculus chromosome 3, clone RP23-215M7, complete sequence Length = 222106 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 attttttgacaaagatggcaa 39 ||||||||||||||||||||| Sbjct: 151453 attttttgacaaagatggcaa 151473
>dbj|AB210620.1| Ciona intestinalis mRNA for p38 kinase, complete cds, clone: cinc009m21 Length = 3582 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 cttgagaagttccacgacccc 277 ||||||||||||||||||||| Sbjct: 987 cttgagaagttccacgacccc 1007
>dbj|AK173857.1| Ciona intestinalis cDNA, clone:cicl006g22, full insert sequence Length = 1395 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 cttgagaagttccacgacccc 277 ||||||||||||||||||||| Sbjct: 987 cttgagaagttccacgacccc 1007
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E01, complete sequence Length = 180426 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 aggagacgaccatggaggcc 401 |||||||||||||||||||| Sbjct: 129387 aggagacgaccatggaggcc 129368
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tggcaataaaaggtagtaca 53 |||||||||||||||||||| Sbjct: 4454984 tggcaataaaaggtagtaca 4455003
>emb|CR932600.1|CNS0KYBV Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 taacttattcaatttattac 114 |||||||||||||||||||| Sbjct: 2656 taacttattcaatttattac 2637
>gb|AC004456.1| Homo sapiens PAC clone RP5-1100F23 from 7, complete sequence Length = 143436 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 attttttgacaaagatggcaataa 42 ||||||||||||||||| |||||| Sbjct: 56671 attttttgacaaagatgccaataa 56694
>emb|AL445189.7| Human DNA sequence from clone RP11-249L21 on chromosome 6 Contains part of a novel gene, a ribosomal protein S12 (RPS12) pseudogene, the 5' end of a novel gene, an ATP synthase, H+ transporting, mitochondrial F0 complex, subunit f, isoform 2 (ATP5J2) psuedogene and part of a novel gene, complete sequence Length = 134566 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 cttctgctgagaatcattaaattt 176 |||||||||||||| ||||||||| Sbjct: 106068 cttctgctgagaattattaaattt 106091
>emb|AL390208.17| Human DNA sequence from clone RP11-787I22 on chromosome 6 Contains the 3' part of a novel gene, the PA26 gene for p53 regulated PA26 nuclear protein and a CpG island, complete sequence Length = 109878 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 cttctgctgagaatcattaaattt 176 |||||||||||||| ||||||||| Sbjct: 11927 cttctgctgagaattattaaattt 11950
>emb|AL135790.7| Human DNA sequence from clone RP11-87N24 on chromosome 9p22.1-23 Contains a ribosomal protein S12 (RPS12) pseudogene, 2 novel genes, the 5' end of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD). and a CpG island, complete sequence Length = 176273 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 tctgaagattaaaccatgag 92 |||||||||||||||||||| Sbjct: 125588 tctgaagattaaaccatgag 125607
>emb|X87369.1|CPNANH C.perfringens nanH gene & ORF1,2,3 & 4 Length = 6482 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tgacaaagatggcaataaaa 44 |||||||||||||||||||| Sbjct: 2430 tgacaaagatggcaataaaa 2449
>gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, complete sequence Length = 190678 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 aaaatgcaaactatattttt 24 |||||||||||||||||||| Sbjct: 102709 aaaatgcaaactatattttt 102690
>gb|AC027419.11| Homo sapiens chromosome 8, clone RP11-654G14, complete sequence Length = 172880 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 atgccagggttttggctgttgaag 383 |||||||||||||||||| ||||| Sbjct: 128903 atgccagggttttggctgctgaag 128926
>gb|AC110788.3| Homo sapiens BAC clone RP11-473D24 from 4, complete sequence Length = 80766 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ttattcaatttattacaact 118 |||||||||||||||||||| Sbjct: 36778 ttattcaatttattacaact 36759
>gb|AC084114.8| Homo sapiens chromosome 8, clone RP11-1059L18, complete sequence Length = 189127 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 atgccagggttttggctgttgaag 383 |||||||||||||||||| ||||| Sbjct: 179538 atgccagggttttggctgctgaag 179515
>emb|BX322623.7| Zebrafish DNA sequence from clone CH211-256I14 in linkage group 15, complete sequence Length = 104062 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aattatgcattgattattta 215 |||||||||||||||||||| Sbjct: 18665 aattatgcattgattattta 18684
>gb|AY116170.1| Gossypium hirsutum D-subgenome putative germin E protein precursor, gene, partial cds Length = 661 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 417 ttgaactggaagtgcatgaggcca 440 |||||||||||||| ||||||||| Sbjct: 512 ttgaactggaagtgaatgaggcca 489
>gb|AY116169.1| Gossypium hirsutum A-subgenome putative germin E protein precursor, gene, partial cds Length = 667 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 417 ttgaactggaagtgcatgaggcca 440 |||||||||||||| ||||||||| Sbjct: 518 ttgaactggaagtgaatgaggcca 495
>gb|AY116168.1| Gossypium raimondii putative germin E protein precursor, gene, partial cds Length = 661 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 417 ttgaactggaagtgcatgaggcca 440 |||||||||||||| ||||||||| Sbjct: 512 ttgaactggaagtgaatgaggcca 489
>gb|AY116167.1| Gossypium herbaceum putative germin E protein precursor, gene, partial cds Length = 669 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 417 ttgaactggaagtgcatgaggcca 440 |||||||||||||| ||||||||| Sbjct: 520 ttgaactggaagtgaatgaggcca 497
>emb|BX649257.8| Zebrafish DNA sequence from clone CH211-197L9 in linkage group 23, complete sequence Length = 182686 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aaatgcaaactatatttttt 25 |||||||||||||||||||| Sbjct: 152647 aaatgcaaactatatttttt 152666
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 aggagacgaccatggaggcc 401 |||||||||||||||||||| Sbjct: 15737283 aggagacgaccatggaggcc 15737264
>gb|AC117832.6| Homo sapiens chromosome 15, clone RP11-963M5, complete sequence Length = 171462 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aaaatgcaaactatattttt 24 |||||||||||||||||||| Sbjct: 11383 aaaatgcaaactatattttt 11402
>gb|AC110073.3| Homo sapiens BAC clone RP11-62A4 from 4, complete sequence Length = 130088 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tttttgacaaagatggcaataaaa 44 ||||||||||||||| |||||||| Sbjct: 107179 tttttgacaaagatgccaataaaa 107156
>emb|BX294386.5| Zebrafish DNA sequence from clone CH211-207B9 in linkage group 8, complete sequence Length = 117352 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 aattatgcattgattattta 215 |||||||||||||||||||| Sbjct: 59483 aattatgcattgattattta 59464
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tgacaaagatggcaataaaa 44 |||||||||||||||||||| Sbjct: 902163 tgacaaagatggcaataaaa 902182
>emb|BX469936.11| Zebrafish DNA sequence from clone DKEY-32I12 in linkage group 19, complete sequence Length = 141772 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 aaaatgcaaactatattttt 24 |||||||||||||||||||| Sbjct: 127119 aaaatgcaaactatattttt 127100
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 acttgagaagttccacgacc 275 |||||||||||||||||||| Sbjct: 2624441 acttgagaagttccacgacc 2624460
>gb|AY098510.1| Ananas comosus germin-like protein mRNA, complete cds Length = 783 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 ccgacgttgaactggaagtg 430 |||||||||||||||||||| Sbjct: 514 ccgacgttgaactggaagtg 495
>emb|AL928947.10| Mouse DNA sequence from clone RP23-69N1 on chromosome 2, complete sequence Length = 76640 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 aggaaggtctctccagcgcg 469 |||||||||||||||||||| Sbjct: 42040 aggaaggtctctccagcgcg 42059 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,470,670 Number of Sequences: 3902068 Number of extensions: 4470670 Number of successful extensions: 100073 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99794 Number of HSP's gapped (non-prelim): 264 length of query: 487 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 465 effective length of database: 17,147,199,772 effective search space: 7973447893980 effective search space used: 7973447893980 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)