>NAC48_ORYSA (Q7F2L3) NAC domain-containing protein 48 (ONAC048)|
          Length = 303

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 22/39 (56%), Positives = 24/39 (61%), Gaps = 14/39 (35%)
 Frame = -3

Query: 479 VNPAAGL--PAG------------DPLLQDILMYWGKPF 405
           +NPAA +  PAG            DPLLQDILMYWGKPF
Sbjct: 265 INPAASILDPAGSGGLGGLGGGGSDPLLQDILMYWGKPF 303

>CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox protein Cux-2)|
           (Cut-like 2)
          Length = 1424

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 355 SAAPKPHVQPPSRTDSQKGLPQYMRMSWRSGSPAGSPAAGLTP 483
           S  P P  +P   T SQ G P  ++    SG PA +P   L+P
Sbjct: 660 SVPPSPPERPSLATASQNGAPALVKQEEGSGGPAQAPLPVLSP 702

>PER3_HUMAN (P56645) Period circadian protein 3 (hPER3)|
          Length = 1201

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 30/92 (32%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
 Frame = +1

Query: 205  PSSNTPGLPRLIAAVRDSLYTIDTFHPTATSICCR*IPAARPSHPG*FPLSAAPKPHVQP 384
            P    P  P   A    S    +  HPTA+++     P   PSHP    LS        P
Sbjct: 977  PPRENPSHPTASALSTGSPPMKNPSHPTASALSTGSPPMKNPSHPTASTLSMG-----LP 1031

Query: 385  PSRTDSQKGLPQYMRMSWRSGSPA--GSPAAG 474
            PSRT S          S  S SP+  GS A+G
Sbjct: 1032 PSRTPSHPTATVLSTGSPPSESPSRTGSAASG 1063

>M3K14_MOUSE (Q9WUL6) Mitogen-activated protein kinase kinase kinase 14 (EC|
           2.7.11.25) (NF-kappa beta-inducing kinase)
           (Serine/threonine-protein kinase NIK)
          Length = 942

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 21/68 (30%), Positives = 29/68 (42%)
 Frame = +1

Query: 169 HIHHDQVQYSLRPSSNTPGLPRLIAAVRDSLYTIDTFHPTATSICCR*IPAARPSHPG*F 348
           H+   +    LRP    P L +LI+ ++   +     HP AT       P   P+HP  F
Sbjct: 207 HLCFKKQDEGLRPVLPRPELHKLISPLQCLNHVWKLHHPQATG------PRPHPTHP--F 258

Query: 349 PLSAAPKP 372
           P S  P P
Sbjct: 259 PYSGMPHP 266

>VGLX_PRVRI (P07562) Secreted glycoprotein GX|
          Length = 498

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -1

Query: 472 RRRGCRPATRSSKTSSCTGAS--LSENPSDSAAVRVVWARLREEINRGDSGEPPE 314
           R RGC P+T      + T A   LS++ +D   V +  +   +E+  GD+ E PE
Sbjct: 211 RWRGCFPSTDEGAWENVTAAEKGLSDDYADYYDVHIFRSESDDEVVHGDAPEAPE 265

>PRD16_HUMAN (Q9HAZ2) PR domain zinc finger protein 16 (PR domain-containing|
           protein 16) (Transcription factor MEL1)
          Length = 1276

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = +1

Query: 316 PAARPSHPG*FPLSAAPKPHVQPPSRTDSQKGLPQYMRMSWRSGSPAGSPAAGL 477
           PA  P  PG FP S  P+P + PP+        P       +  SP G+PA  L
Sbjct: 508 PALTPGFPGIFPPSLYPRPPLLPPTPLLKS---PLNHTQDAKLPSPLGNPALPL 558

>S39A6_MOUSE (Q8C145) Zinc transporter SLC39A6 precursor (Solute carrier family|
           39 member 6) (Endoplamic reticulum membrane-linked
           protein) (Ermelin)
          Length = 765

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = +2

Query: 206 PPRTHRGSRVSSPPSVTPCTLLIPFIQRLRVSAVDRFRRLARVTPVDFLSQPRPNHTYSR 385
           P R  +    S+PPS+T              S V R  RLAR    + +S+PR +  YSR
Sbjct: 217 PGRRTKDVNPSTPPSIT------------EKSRVGRLSRLARKKSNESVSEPRKSFMYSR 264

Query: 386 RVGRILRKACPST 424
                +++   +T
Sbjct: 265 NTNDNIQECFNTT 277

>CABIN_RAT (O88480) Calcineurin-binding protein Cabin 1 (Calcineurin|
           inhibitor) (CAIN)
          Length = 2182

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +2

Query: 164 KSIYTMTKYSTLCVPPRTHRGSRVSSPPSVTPCTLLIPFIQRLRVSAV 307
           +S+  M  + T C PPR   G R+       P  LL P I    VS V
Sbjct: 275 ESLLAMYNHLTTCEPPRPSLGKRIDLSDYQDPSQLLAPSIVVTPVSVV 322

>PERL_HUMAN (P22079) Lactoperoxidase precursor (EC 1.11.1.7) (LPO) (Salivary|
           peroxidase) (SPO)
          Length = 712

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 348 SSLSRAQTTRTAAESDGFSERLAPVHEDVLEER 446
           +S +RAQTTRT+A SD  S+    V++  L+ R
Sbjct: 21  ASTTRAQTTRTSAISDTVSQAKVQVNKAFLDSR 53

>DSCL1_HUMAN (Q8TD84) Down syndrome cell adhesion molecule-like protein 1|
            precursor (Down syndrome cell adhesion molecule 2)
          Length = 2053

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
 Frame = +1

Query: 133  PNQSHIHSLVQIHIHHDQVQY-SLRPSSNTPGLPRLIAAVRDSLYTIDT---FHPTATSI 300
            P ++ I +L + +  H Q ++ +L P+S + GLP   A    S  T+       P   + 
Sbjct: 1925 PREASIRNLARTY--HTQARHLTLDPASKSLGLPHPGAPAAASTATLPQRTLAMPAPPAG 1982

Query: 301  CCR*IPAARPSHPG*FPLSAAPKPHVQPP 387
                 P   P+ P   P +A P P  +PP
Sbjct: 1983 TAPPAPGPTPAEPPTAPSAAPPAPSTEPP 2011

>PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:|
           Proline-rich peptide SP-A (PRP-SP-A); Proline-rich
           peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)]
          Length = 676

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/53 (32%), Positives = 20/53 (37%)
 Frame = +1

Query: 316 PAARPSHPG*FPLSAAPKPHVQPPSRTDSQKGLPQYMRMSWRSGSPAGSPAAG 474
           P   P  PG  P  A P P   PP+    Q   P   +   +   PAG P  G
Sbjct: 399 PPPGPPPPGPAPPGARPPPPPPPPADEPQQGPAPSGDKPKKKPPPPAGPPPPG 451

>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2|
          Length = 964

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
 Frame = +1

Query: 316 PAARPSHPG*FPLSAAPKPHVQPPSRTDSQKGLPQYMRMSWR--SGSPAGSPAAGLTP 483
           P  +P  P     S +PKP  +P  R     GLP   R   R  +G   G+P  G  P
Sbjct: 164 PKPKPGAP-----SKSPKPGARPGPRPGGSAGLPSAARPGPRPGAGRRTGAPRPGNNP 216

>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 1156

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
 Frame = -1

Query: 481 ASTRRRGCRPATRSSKTSSCTGASLSENPSDSAAVRVVWARLREEINRGDSGEPPESIDS 302
           A TRRR   P++  S + S    +    P+ S   R        E +R D   P E+  S
Sbjct: 39  APTRRRSRSPSSYHSSSRSHRDHTTDPYPNGSGHDRRHDRDRNRERDRRDHDSPIEAAPS 98

Query: 301 RYS*PLDERY--Q*CTRSHGRRR*DAGAP 221
               P   R+  +   R  GRRR D GAP
Sbjct: 99  ----PDGRRFHVEGAPRQGGRRRWDEGAP 123

>RNFC_HAEDU (Q7VNT4) Electron transport complex protein rnfC|
          Length = 702

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +3

Query: 327 PESPRLISSLSRAQTTRTAAESDGFSERLAPVHE 428
           P    + ++L+RA+  +TA ++DG +  +AP +E
Sbjct: 566 PRKAAVAAALARAKAKKTAQQADGLAAEVAPENE 599

>ZCH14_MOUSE (Q8VIG0) Zinc finger CCHC domain-containing protein 14 (BDG-29)|
          Length = 956

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 13/102 (12%)
 Frame = +1

Query: 205 PSSNTPGLPRLIAAVRDSLYTIDT-----------FHPTATSICCR*IPAARPSHPG*FP 351
           P++    +P  I   R +LYT +T             P   S C     A+  SHP    
Sbjct: 665 PNNGQISVPPAIMNPRTALYTANTKVAFSAVSSVPVGPLQGSFCANSNTASPSSHPSTSF 724

Query: 352 LSAAPKPHVQPPSRTDSQKGLPQYMRMSWRSG--SPAGSPAA 471
            S A  P    PS + +   +P+    S  +G  SP   PA+
Sbjct: 725 ASMASLPSCPAPSSSPALSSVPESSFYSGGAGSSSPGNIPAS 766


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,195,510
Number of Sequences: 219361
Number of extensions: 1484391
Number of successful extensions: 5036
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5033
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)