Clone Name | rbart34d12 |
---|---|
Clone Library Name | barley_pub |
>APX2_ORYSA (Q9FE01) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb)| Length = 251 Score = 40.0 bits (92), Expect = 0.001 Identities = 20/36 (55%), Positives = 21/36 (58%) Frame = -1 Query: 399 DPAFRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGE 292 DPAFRPLV+K AHLKLSELGF E Sbjct: 215 DPAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250
>APX1_ORYSA (P93404) L-ascorbate peroxidase 1, cytosolic (EC 1.11.1.11) (APXa)| Length = 249 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/37 (54%), Positives = 22/37 (59%) Frame = -1 Query: 399 DPAFRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGEA 289 DPAFRPLV+K AHLKLSELGF +A Sbjct: 213 DPAFRPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 249
>APX1_ARATH (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)| Length = 249 Score = 38.1 bits (87), Expect = 0.005 Identities = 18/37 (48%), Positives = 21/37 (56%) Frame = -1 Query: 399 DPAFRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGEA 289 DP FRPLV+K AH+KLSELGF +A Sbjct: 213 DPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFADA 249
>APX1_PEA (P48534) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)| Length = 249 Score = 36.6 bits (83), Expect = 0.015 Identities = 19/37 (51%), Positives = 20/37 (54%) Frame = -1 Query: 399 DPAFRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGEA 289 D FRPLV+K AHLKLSELGF EA Sbjct: 213 DSVFRPLVEKYAADEDVFFADYAEAHLKLSELGFAEA 249
>APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1.11)| Length = 291 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -1 Query: 399 DPAFRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGEASEG 280 DP+FR VD +H KLSELGF S G Sbjct: 211 DPSFRRYVDLYARDEDTFFKDYAESHKKLSELGFTPRSSG 250
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 23.9 bits (50), Expect(2) = 6.4 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +2 Query: 251 PQAPILNQQQPSDASPNPS 307 PQAP +P+DA P P+ Sbjct: 94 PQAPAEQTARPTDARPGPA 112 Score = 22.3 bits (46), Expect(2) = 6.4 Identities = 11/31 (35%), Positives = 14/31 (45%) Frame = +3 Query: 303 QVQRA*GVPRRNQQRTHPHPQHICPQVGGRP 395 Q Q+ G P + R P P P+VG P Sbjct: 152 QQQQRPGAPAQGGPRPGPKPGPKTPRVGNNP 182
>LEU2_RHOPA (Q6ND69) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 469 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +1 Query: 97 NTPSTDRSNPNPD 135 N P+TDRS PNPD Sbjct: 67 NVPTTDRSKPNPD 79
>LEU2_NITWN (Q3SNV3) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 468 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +1 Query: 97 NTPSTDRSNPNPD 135 N P+TDRS PNPD Sbjct: 66 NVPTTDRSKPNPD 78 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,128,857 Number of Sequences: 219361 Number of extensions: 631704 Number of successful extensions: 1673 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1635 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1671 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)