Clone Name | rbart34d05 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK072098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118F23, full insert sequence Length = 3990 Score = 490 bits (247), Expect = e-135 Identities = 440/503 (87%), Gaps = 1/503 (0%) Strand = Plus / Minus Query: 5 tcaaaaaaggagctctttaaccagtaaattcatgtgtcgtcattatctctacagtcagcc 64 ||||||||| |||| |||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 1757 tcaaaaaagtagctacttaaccagtaaaatcatgtatcgtcattatctctacagtcagcc 1698 Query: 65 atgccaataa-taatggccggtttgcaaaacaattccagaatttaatcgagagacagatt 123 ||| |||||| | ||||||| ||||| ||||| ||| |||| |||| || || ||||| Sbjct: 1697 atgtcaataaatgatggccgatttgccaaacagctccgtaattcaatcaagggagagatt 1638 Query: 124 tttcttcatcgcctcataaactaggtaggtaatgcttgcagcaggcaccactttaaggag 183 ||||||||| || ||||| |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 1637 tttcttcattgcttcatacactaggtaggtaatacttgctgcaggcaccactttaagaag 1578 Query: 184 gtttggtaggattcctttgtagaatccagaaacgccttcgtgccgtagggttctccagaa 243 |||||||||||||||||||||||||||||||| || || ||| |||| ||||||||||| Sbjct: 1577 atttggtaggattcctttgtagaatccagaaacaccctcatgctgtagcgttctccagaa 1518 Query: 244 cacatcagacattcctttatatgcagcctctgaattggcttgttgagcttgcagtcttgt 303 ||||||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 1517 tacatcagacatacctctatatgcagattctgaattggctcgttgagcttgcagtcttgt 1458 Query: 304 tctaataacctgtaaagggtaaacacatgttgctcccaaagctccagaaacagtaccaca 363 || ||||||||||||||||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 1457 cctgataacctgtaaagggtaaacacatgttgcccccaaggctcctgatacagtcccaca 1398 Query: 364 acccaattgtactagaggaccaggttcggtatcctttattatatatgtcctcgaggcatc 423 |||| |||||||||||||||||| || ||||||| | ||||||||| | || | || Sbjct: 1397 gcccagttgtactagaggaccaggatcactatccttcaggatatatgtcttggatacgtc 1338 Query: 424 ttttaaagtctcgtatacggcaagatcaattccagcataagggacaataccaagcaatga 483 ||| || ||||| ||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 1337 tttcaatgtctcatatacagcaagatcaattccggcataagggacaataccaagcaaaga 1278 Query: 484 tggaacgagacctctatagaatg 506 |||||| |||||||||||||||| Sbjct: 1277 tggaaccagacctctatagaatg 1255
>dbj|AK070190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042A05, full insert sequence Length = 2118 Score = 490 bits (247), Expect = e-135 Identities = 440/503 (87%), Gaps = 1/503 (0%) Strand = Plus / Minus Query: 5 tcaaaaaaggagctctttaaccagtaaattcatgtgtcgtcattatctctacagtcagcc 64 ||||||||| |||| |||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 1757 tcaaaaaagtagctacttaaccagtaaaatcatgtatcgtcattatctctacagtcagcc 1698 Query: 65 atgccaataa-taatggccggtttgcaaaacaattccagaatttaatcgagagacagatt 123 ||| |||||| | ||||||| ||||| ||||| ||| |||| |||| || || ||||| Sbjct: 1697 atgtcaataaatgatggccgatttgccaaacagctccgtaattcaatcaagggagagatt 1638 Query: 124 tttcttcatcgcctcataaactaggtaggtaatgcttgcagcaggcaccactttaaggag 183 ||||||||| || ||||| |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 1637 tttcttcattgcttcatacactaggtaggtaatacttgctgcaggcaccactttaagaag 1578 Query: 184 gtttggtaggattcctttgtagaatccagaaacgccttcgtgccgtagggttctccagaa 243 |||||||||||||||||||||||||||||||| || || ||| |||| ||||||||||| Sbjct: 1577 atttggtaggattcctttgtagaatccagaaacaccctcatgctgtagcgttctccagaa 1518 Query: 244 cacatcagacattcctttatatgcagcctctgaattggcttgttgagcttgcagtcttgt 303 ||||||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 1517 tacatcagacatacctctatatgcagattctgaattggctcgttgagcttgcagtcttgt 1458 Query: 304 tctaataacctgtaaagggtaaacacatgttgctcccaaagctccagaaacagtaccaca 363 || ||||||||||||||||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 1457 cctgataacctgtaaagggtaaacacatgttgcccccaaggctcctgatacagtcccaca 1398 Query: 364 acccaattgtactagaggaccaggttcggtatcctttattatatatgtcctcgaggcatc 423 |||| |||||||||||||||||| || ||||||| | ||||||||| | || | || Sbjct: 1397 gcccagttgtactagaggaccaggatcactatccttcaggatatatgtcttggatacgtc 1338 Query: 424 ttttaaagtctcgtatacggcaagatcaattccagcataagggacaataccaagcaatga 483 ||| || ||||| ||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 1337 tttcaatgtctcatatacagcaagatcaattccggcataagggacaataccaagcaaaga 1278 Query: 484 tggaacgagacctctatagaatg 506 |||||| |||||||||||||||| Sbjct: 1277 tggaaccagacctctatagaatg 1255
>dbj|AK059035.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-C09, full insert sequence Length = 1058 Score = 490 bits (247), Expect = e-135 Identities = 440/503 (87%), Gaps = 1/503 (0%) Strand = Plus / Minus Query: 5 tcaaaaaaggagctctttaaccagtaaattcatgtgtcgtcattatctctacagtcagcc 64 ||||||||| |||| |||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 731 tcaaaaaagtagctacttaaccagtaaaatcatgtatcgtcattatctctacagtcagcc 672 Query: 65 atgccaataa-taatggccggtttgcaaaacaattccagaatttaatcgagagacagatt 123 ||| |||||| | ||||||| ||||| ||||| ||| |||| |||| || || ||||| Sbjct: 671 atgtcaataaatgatggccgatttgccaaacagctccgtaattcaatcaagggagagatt 612 Query: 124 tttcttcatcgcctcataaactaggtaggtaatgcttgcagcaggcaccactttaaggag 183 ||||||||| || ||||| |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 611 tttcttcattgcttcatacactaggtaggtaatacttgctgcaggcaccactttaagaag 552 Query: 184 gtttggtaggattcctttgtagaatccagaaacgccttcgtgccgtagggttctccagaa 243 |||||||||||||||||||||||||||||||| || || ||| |||| ||||||||||| Sbjct: 551 atttggtaggattcctttgtagaatccagaaacaccctcatgctgtagcgttctccagaa 492 Query: 244 cacatcagacattcctttatatgcagcctctgaattggcttgttgagcttgcagtcttgt 303 ||||||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 491 tacatcagacatacctctatatgcagattctgaattggctcgttgagcttgcagtcttgt 432 Query: 304 tctaataacctgtaaagggtaaacacatgttgctcccaaagctccagaaacagtaccaca 363 || ||||||||||||||||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 431 cctgataacctgtaaagggtaaacacatgttgcccccaaggctcctgatacagtcccaca 372 Query: 364 acccaattgtactagaggaccaggttcggtatcctttattatatatgtcctcgaggcatc 423 |||| |||||||||||||||||| || ||||||| | ||||||||| | || | || Sbjct: 371 gcccagttgtactagaggaccaggatcactatccttcaggatatatgtcttggatacgtc 312 Query: 424 ttttaaagtctcgtatacggcaagatcaattccagcataagggacaataccaagcaatga 483 ||| || ||||| ||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 311 tttcaatgtctcatatacagcaagatcaattccggcataagggacaataccaagcaaaga 252 Query: 484 tggaacgagacctctatagaatg 506 |||||| |||||||||||||||| Sbjct: 251 tggaaccagacctctatagaatg 229
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 295 bits (149), Expect = 7e-77 Identities = 261/297 (87%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 5 tcaaaaaaggagctctttaaccagtaaattcatgtgtcgtcattatctctacagtcagcc 64 ||||||||| |||| |||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 23556508 tcaaaaaagtagctacttaaccagtaaaatcatgtatcgtcattatctctacagtcagcc 23556449 Query: 65 atgccaataa-taatggccggtttgcaaaacaattccagaatttaatcgagagacagatt 123 ||| |||||| | ||||||| ||||| ||||| ||| |||| |||| || || ||||| Sbjct: 23556448 atgtcaataaatgatggccgatttgccaaacagctccgtaattcaatcaagggagagatt 23556389 Query: 124 tttcttcatcgcctcataaactaggtaggtaatgcttgcagcaggcaccactttaaggag 183 ||||||||| || ||||| |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 23556388 tttcttcattgcttcatacactaggtaggtaatacttgctgcaggcaccactttaagaag 23556329 Query: 184 gtttggtaggattcctttgtagaatccagaaacgccttcgtgccgtagggttctccagaa 243 |||||||||||||||||||||||||||||||| || || ||| |||| ||||||||||| Sbjct: 23556328 atttggtaggattcctttgtagaatccagaaacaccctcatgctgtagcgttctccagaa 23556269 Query: 244 cacatcagacattcctttatatgcagcctctgaattggcttgttgagcttgcagtct 300 ||||||||||| ||| ||||||||| |||||||||||| |||||||||||||||| Sbjct: 23556268 tacatcagacatacctctatatgcagattctgaattggctcgttgagcttgcagtct 23556212 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 422 tcttttaaagtctcgtatacggcaagatcaattccagcataagggacaataccaagcaat 481 ||||| || ||||| ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 23555921 tctttcaatgtctcatatacagcaagatcaattccggcataagggacaataccaagcaaa 23555862 Query: 482 gatggaacgagacctctatagaatg 506 |||||||| |||||||||||||||| Sbjct: 23555861 gatggaaccagacctctatagaatg 23555837 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Minus Query: 299 cttgttctaataacctgtaaagggtaaacacatgttgctcccaaagctccagaaacagta 358 ||||| || ||||||||||||||||||||||||||||| ||||| ||||| || ||||| Sbjct: 23556135 cttgtcctgataacctgtaaagggtaaacacatgttgcccccaaggctcctgatacagtc 23556076 Query: 359 ccacaacccaattgtactagaggaccagg 387 ||||| |||| |||||||||||||||||| Sbjct: 23556075 ccacagcccagttgtactagaggaccagg 23556047
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 295 bits (149), Expect = 7e-77 Identities = 261/297 (87%), Gaps = 1/297 (0%) Strand = Plus / Minus Query: 5 tcaaaaaaggagctctttaaccagtaaattcatgtgtcgtcattatctctacagtcagcc 64 ||||||||| |||| |||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 37472 tcaaaaaagtagctacttaaccagtaaaatcatgtatcgtcattatctctacagtcagcc 37413 Query: 65 atgccaataa-taatggccggtttgcaaaacaattccagaatttaatcgagagacagatt 123 ||| |||||| | ||||||| ||||| ||||| ||| |||| |||| || || ||||| Sbjct: 37412 atgtcaataaatgatggccgatttgccaaacagctccgtaattcaatcaagggagagatt 37353 Query: 124 tttcttcatcgcctcataaactaggtaggtaatgcttgcagcaggcaccactttaaggag 183 ||||||||| || ||||| |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 37352 tttcttcattgcttcatacactaggtaggtaatacttgctgcaggcaccactttaagaag 37293 Query: 184 gtttggtaggattcctttgtagaatccagaaacgccttcgtgccgtagggttctccagaa 243 |||||||||||||||||||||||||||||||| || || ||| |||| ||||||||||| Sbjct: 37292 atttggtaggattcctttgtagaatccagaaacaccctcatgctgtagcgttctccagaa 37233 Query: 244 cacatcagacattcctttatatgcagcctctgaattggcttgttgagcttgcagtct 300 ||||||||||| ||| ||||||||| |||||||||||| |||||||||||||||| Sbjct: 37232 tacatcagacatacctctatatgcagattctgaattggctcgttgagcttgcagtct 37176 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 422 tcttttaaagtctcgtatacggcaagatcaattccagcataagggacaataccaagcaat 481 ||||| || ||||| ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 36885 tctttcaatgtctcatatacagcaagatcaattccggcataagggacaataccaagcaaa 36826 Query: 482 gatggaacgagacctctatagaatg 506 |||||||| |||||||||||||||| Sbjct: 36825 gatggaaccagacctctatagaatg 36801 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Minus Query: 299 cttgttctaataacctgtaaagggtaaacacatgttgctcccaaagctccagaaacagta 358 ||||| || ||||||||||||||||||||||||||||| ||||| ||||| || ||||| Sbjct: 37099 cttgtcctgataacctgtaaagggtaaacacatgttgcccccaaggctcctgatacagtc 37040 Query: 359 ccacaacccaattgtactagaggaccagg 387 ||||| |||| |||||||||||||||||| Sbjct: 37039 ccacagcccagttgtactagaggaccagg 37011
>ref|XM_464520.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1431 Score = 202 bits (102), Expect = 8e-49 Identities = 246/294 (83%) Strand = Plus / Minus Query: 106 ttaatcgagagacagatttttcttcatcgcctcataaactaggtaggtaatgcttgcagc 165 ||||||||| || ||| |||||||||| | ||||||||| || || || || |||||||| Sbjct: 1431 ttaatcgagtgatagacttttcttcattgtctcataaacaagatatgttatacttgcagc 1372 Query: 166 aggcaccactttaaggaggtttggtaggattcctttgtagaatccagaaacgccttcgtg 225 || |||||||| || || ||||||| | |||||||||||||| |||| || || || Sbjct: 1371 tggaaccactttgagaagatttggtacaagccctttgtagaatccggaaattccctcatg 1312 Query: 226 ccgtagggttctccagaacacatcagacattcctttatatgcagcctctgaattggcttg 285 | | || ||| ||||||| ||||||||||| ||| ||||||||||||||||||||||| | Sbjct: 1311 ctgcagtgttttccagaaaacatcagacatccctctatatgcagcctctgaattggctcg 1252 Query: 286 ttgagcttgcagtcttgttctaataacctgtaaagggtaaacacatgttgctcccaaagc 345 ||||||||||||||||||||| || || || ||||||||||||||||||||||| | ||| Sbjct: 1251 ttgagcttgcagtcttgttctgatgacttgcaaagggtaaacacatgttgctcctagagc 1192 Query: 346 tccagaaacagtaccacaacccaattgtactagaggaccaggttcggtatcctt 399 ||| || || || |||||||| | ||| |||| ||||||||| ||| ||||||| Sbjct: 1191 tcctgagactgtcccacaacctagttggactaaaggaccaggatcgctatcctt 1138 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 445 aagatcaattccagcataagggacaataccaagcaatgatggaacgagacctct 498 |||||||||||||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 1092 aagatcaattccagcatacggaaccataccaagcaatgatggaacgaggcctct 1039
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 163 bits (82), Expect = 7e-37 Identities = 212/254 (83%), Gaps = 1/254 (0%) Strand = Plus / Plus Query: 48 tatctctacagtcagccatgccaataataatggccggtttgcaaaaca-attccagaatt 106 |||||||||||||||||||||||||||| ||||| ||| || |||| | | |||||| Sbjct: 5664951 tatctctacagtcagccatgccaataatgatggctggtatggaaaatagacagaagaatt 5665010 Query: 107 taatcgagagacagatttttcttcatcgcctcataaactaggtaggtaatgcttgcagca 166 |||||||| || ||| |||||||||| | ||||||||| || || || || |||||||| Sbjct: 5665011 taatcgagtgatagacttttcttcattgtctcataaacaagatatgttatacttgcagct 5665070 Query: 167 ggcaccactttaaggaggtttggtaggattcctttgtagaatccagaaacgccttcgtgc 226 || |||||||| || || ||||||| | |||||||||||||| |||| || || ||| Sbjct: 5665071 ggaaccactttgagaagatttggtacaagccctttgtagaatccggaaattccctcatgc 5665130 Query: 227 cgtagggttctccagaacacatcagacattcctttatatgcagcctctgaattggcttgt 286 | || ||| ||||||| ||||||||||| ||| ||||||||||||||||||||||| || Sbjct: 5665131 tgcagtgttttccagaaaacatcagacatccctctatatgcagcctctgaattggctcgt 5665190 Query: 287 tgagcttgcagtct 300 |||||||||||||| Sbjct: 5665191 tgagcttgcagtct 5665204 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 445 aagatcaattccagcataagggacaataccaagcaatgatggaacgagacctct 498 |||||||||||||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 5665515 aagatcaattccagcatacggaaccataccaagcaatgatggaacgaggcctct 5665568 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 299 cttgttctaataacctgtaaagggtaaacacatgttgctcccaaagctccagaaacagta 358 |||||||| || || || ||||||||||||||||||||||| | |||||| || || || Sbjct: 5665285 cttgttctgatgacttgcaaagggtaaacacatgttgctcctagagctcctgagactgtc 5665344 Query: 359 ccacaacccaattgtactagaggaccagg 387 |||||||| | ||| |||| ||||||||| Sbjct: 5665345 ccacaacctagttggactaaaggaccagg 5665373
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09 Length = 168064 Score = 163 bits (82), Expect = 7e-37 Identities = 212/254 (83%), Gaps = 1/254 (0%) Strand = Plus / Plus Query: 48 tatctctacagtcagccatgccaataataatggccggtttgcaaaaca-attccagaatt 106 |||||||||||||||||||||||||||| ||||| ||| || |||| | | |||||| Sbjct: 92687 tatctctacagtcagccatgccaataatgatggctggtatggaaaatagacagaagaatt 92746 Query: 107 taatcgagagacagatttttcttcatcgcctcataaactaggtaggtaatgcttgcagca 166 |||||||| || ||| |||||||||| | ||||||||| || || || || |||||||| Sbjct: 92747 taatcgagtgatagacttttcttcattgtctcataaacaagatatgttatacttgcagct 92806 Query: 167 ggcaccactttaaggaggtttggtaggattcctttgtagaatccagaaacgccttcgtgc 226 || |||||||| || || ||||||| | |||||||||||||| |||| || || ||| Sbjct: 92807 ggaaccactttgagaagatttggtacaagccctttgtagaatccggaaattccctcatgc 92866 Query: 227 cgtagggttctccagaacacatcagacattcctttatatgcagcctctgaattggcttgt 286 | || ||| ||||||| ||||||||||| ||| ||||||||||||||||||||||| || Sbjct: 92867 tgcagtgttttccagaaaacatcagacatccctctatatgcagcctctgaattggctcgt 92926 Query: 287 tgagcttgcagtct 300 |||||||||||||| Sbjct: 92927 tgagcttgcagtct 92940 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 445 aagatcaattccagcataagggacaataccaagcaatgatggaacgagacctct 498 |||||||||||||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 93251 aagatcaattccagcatacggaaccataccaagcaatgatggaacgaggcctct 93304 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 299 cttgttctaataacctgtaaagggtaaacacatgttgctcccaaagctccagaaacagta 358 |||||||| || || || ||||||||||||||||||||||| | |||||| || || || Sbjct: 93021 cttgttctgatgacttgcaaagggtaaacacatgttgctcctagagctcctgagactgtc 93080 Query: 359 ccacaacccaattgtactagaggaccagg 387 |||||||| | ||| |||| ||||||||| Sbjct: 93081 ccacaacctagttggactaaaggaccagg 93109
>gb|AY109073.1| Zea mays PCO141217 mRNA sequence Length = 1059 Score = 117 bits (59), Expect = 4e-23 Identities = 190/234 (81%) Strand = Plus / Minus Query: 106 ttaatcgagagacagatttttcttcatcgcctcataaactaggtaggtaatgcttgcagc 165 |||||| || || ||| |||||||||| | ||||||||| || ||||||||||||||||| Sbjct: 947 ttaatctagggagagacttttcttcattgtctcataaacaagataggtaatgcttgcagc 888 Query: 166 aggcaccactttaaggaggtttggtaggattcctttgtagaatccagaaacgccttcgtg 225 |||||||||||||| || ||||||| | |||||||| ||||||||||| ||||| | Sbjct: 887 tggcaccactttaagaagatttggtacaaggcctttgtaaaatccagaaactccttcacg 828 Query: 226 ccgtagggttctccagaacacatcagacattcctttatatgcagcctctgaattggcttg 285 || || ||| ||| || ||| | ||| || |||||| | |||||||||||||| | Sbjct: 827 acgcagagttatccgganacaatcggtcatccccctatatggatcctctgaattggctgg 768 Query: 286 ttgagcttgcagtcttgttctaataacctgtaaagggtaaacacatgttgctcc 339 |||||||||| ||||||||| || || |||||||| ||||| ||||| ||||| Sbjct: 767 ctgagcttgcattcttgttctgatgacttgtaaaggataaacgcatgtcgctcc 714 Score = 83.8 bits (42), Expect = 5e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 445 aagatcaattccagcataagggacaataccaagcaatgatggaacgagacctctatagaa 504 |||||||||||||||||||||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 608 aagatcaattccagcataagggaccatgccaagcaatgatggaacaaggcctctgtagaa 549 Query: 505 tg 506 || Sbjct: 548 tg 547
>ref|NM_001037044.1| Arabidopsis thaliana binding / calcium ion binding AT5G61810 transcript variant AT5G61810.2 mRNA, complete cds Length = 2305 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 289 agcttgcagtcttgttctaataacctgtaaagggtaaacacatgttgctcccaaagctcc 348 |||||||| ||||||||| || |||||||| ||||||||||| | |||||| | |||||| Sbjct: 1409 agcttgcattcttgttcttatgacctgtaatgggtaaacacacgatgctccaagagctcc 1350 Query: 349 agaa 352 |||| Sbjct: 1349 agaa 1346
>ref|NM_125575.2| Arabidopsis thaliana binding / calcium ion binding AT5G61810 transcript variant AT5G61810.1 mRNA, complete cds Length = 2332 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 289 agcttgcagtcttgttctaataacctgtaaagggtaaacacatgttgctcccaaagctcc 348 |||||||| ||||||||| || |||||||| ||||||||||| | |||||| | |||||| Sbjct: 1436 agcttgcattcttgttcttatgacctgtaatgggtaaacacacgatgctccaagagctcc 1377 Query: 349 agaa 352 |||| Sbjct: 1376 agaa 1373
>gb|AY091353.1| Arabidopsis thaliana putative peroxisomal Ca-dependent solute carrier (At5g61810) mRNA, complete cds Length = 1468 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 289 agcttgcagtcttgttctaataacctgtaaagggtaaacacatgttgctcccaaagctcc 348 |||||||| ||||||||| || |||||||| ||||||||||| | |||||| | |||||| Sbjct: 1269 agcttgcattcttgttcttatgacctgtaatgggtaaacacacgatgctccaagagctcc 1210 Query: 349 agaa 352 |||| Sbjct: 1209 agaa 1206
>gb|AY056219.1| Arabidopsis thaliana putative peroxisomal Ca-dependent solute carrier protein (At5g61810) mRNA, complete cds Length = 1843 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 289 agcttgcagtcttgttctaataacctgtaaagggtaaacacatgttgctcccaaagctcc 348 |||||||| ||||||||| || |||||||| ||||||||||| | |||||| | |||||| Sbjct: 1436 agcttgcattcttgttcttatgacctgtaatgggtaaacacacgatgctccaagagctcc 1377 Query: 349 agaa 352 |||| Sbjct: 1376 agaa 1373
>emb|BX832140.1|CNS0A10P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH54ZC03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1694 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 289 agcttgcagtcttgttctaataacctgtaaagggtaaacacatgttgctcccaaagctcc 348 |||||||| ||||||||| || |||||||| ||||||||||| | |||||| | |||||| Sbjct: 1369 agcttgcattcttgttcttatgacctgtaatgggtaaacacacgatgctccaagagctcc 1310 Query: 349 agaa 352 |||| Sbjct: 1309 agaa 1306
>emb|BX832042.1|CNS0A10X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH48ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1592 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 289 agcttgcagtcttgttctaataacctgtaaagggtaaacacatgttgctcccaaagctcc 348 |||||||| ||||||||| || |||||||| ||||||||||| | |||||| | |||||| Sbjct: 1312 agcttgcattcttgttcttatgacctgtaatgggtaaacacacgatgctccaagagctcc 1253 Query: 349 agaa 352 |||| Sbjct: 1252 agaa 1249
>dbj|AP004932.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10J03, TM0094a, complete sequence Length = 65557 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 152 gtaatgcttgcagcaggcaccactttaaggaggtttggtaggattcctttgtagaa 207 |||||||| ||||||||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 3231 gtaatgctggcagcaggcacaactttgagtagatttggaaggattcctttgtagaa 3176 Score = 42.1 bits (21), Expect = 1.7 Identities = 54/65 (83%) Strand = Plus / Minus Query: 326 acacatgttgctcccaaagctccagaaacagtaccacaacccaattgtactagaggacca 385 ||||| || ||||| | ||||||||||| ||| ||||| || | ||| || ||||||||| Sbjct: 2653 acacaagtggctccaagagctccagaaatagtcccacatcctagttgcacgagaggacca 2594 Query: 386 ggttc 390 ||||| Sbjct: 2593 ggttc 2589
>ref|NM_120814.1| Arabidopsis thaliana binding / calcium ion binding AT5G07320 mRNA, complete cds Length = 1440 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 290 gcttgcagtcttgttctaataacctgtaaagggtaaacacatgttgctcc 339 ||||||| ||||||||| | |||||||| ||||||||||||| |||||| Sbjct: 1271 gcttgcattcttgttcttactacctgtaacgggtaaacacatgatgctcc 1222 Score = 40.1 bits (20), Expect = 6.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 107 taatcgagagacagatttttcttcatcgcctcataaactaggtaggtaatgcttgc 162 ||||| |||| || |||||||||||| || |||||||| | ||| || |||||||| Sbjct: 1439 taatcaagagccatatttttcttcatagcttcataaacaatgtacgtgatgcttgc 1384
>dbj|AK175228.1| Arabidopsis thaliana mRNA for peroxisomal Ca-dependent solute carrier-like protein, complete cds, clone: RAFL21-65-I24 Length = 1992 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 290 gcttgcagtcttgttctaataacctgtaaagggtaaacacatgttgctcc 339 ||||||| ||||||||| | |||||||| ||||||||||||| |||||| Sbjct: 1608 gcttgcattcttgttcttactacctgtaacgggtaaacacatgatgctcc 1559 Score = 40.1 bits (20), Expect = 6.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 107 taatcgagagacagatttttcttcatcgcctcataaactaggtaggtaatgcttgc 162 ||||| |||| || |||||||||||| || |||||||| | ||| || |||||||| Sbjct: 1776 taatcaagagccatatttttcttcatagcttcataaacaatgtacgtgatgcttgc 1721
>dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC9 Length = 57246 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 299 cttgttctaataacctgtaaagggtaaacacatgttgctcccaaagctccagaa 352 |||||||| || |||||||| ||||||||||| | |||||| | |||||||||| Sbjct: 37537 cttgttcttatgacctgtaatgggtaaacacacgatgctccaagagctccagaa 37590
>gb|AC084592.1|CBRG42D24 Caenorhabditis briggsae cosmid G42D24, complete sequence Length = 24534 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Plus Query: 424 ttttaaagtctcgtatacggcaagatcaattccagcataaggga 467 ||||||||| ||||| |||| ||||| |||||||||||||||| Sbjct: 14618 ttttaaagtttcgtagacggtgagatcgattccagcataaggga 14661
>gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete sequence Length = 117358 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 326 acacatgttgctcccaaagctccagaaacagtaccacaacccaattgtactagaggacca 385 |||||||| ||||| | || |||||||| || ||||| || | |||||||||||||||| Sbjct: 77313 acacatgtagctccaagagttccagaaattgtcccacatcctagttgtactagaggacca 77254 Query: 386 gg 387 || Sbjct: 77253 gg 77252
>ref|XM_475762.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2130 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 gttgctcccaaagctccagaa 352 ||||||||||||||||||||| Sbjct: 1931 gttgctcccaaagctccagaa 1911
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 gttgctcccaaagctccagaa 352 ||||||||||||||||||||| Sbjct: 191858 gttgctcccaaagctccagaa 191878
>gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1014_C08, complete sequence Length = 95638 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 gttgctcccaaagctccagaa 352 ||||||||||||||||||||| Sbjct: 38163 gttgctcccaaagctccagaa 38183
>emb|CR356224.5| Zebrafish DNA sequence from clone DKEY-17P16 in linkage group 12, complete sequence Length = 112893 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 ctttatatgcagcctctgaat 278 ||||||||||||||||||||| Sbjct: 4004 ctttatatgcagcctctgaat 4024
>emb|AL844587.19| Zebrafish DNA sequence from clone DKEY-7E14 in linkage group 12, complete sequence Length = 254964 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 ctttatatgcagcctctgaat 278 ||||||||||||||||||||| Sbjct: 151439 ctttatatgcagcctctgaat 151419
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 gttgctcccaaagctccagaa 352 ||||||||||||||||||||| Sbjct: 26340810 gttgctcccaaagctccagaa 26340830
>gb|AC016759.11| Homo sapiens BAC clone RP11-535J8 from 2, complete sequence Length = 219574 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 cacatgttgctcccaaagctc 347 ||||||||||||||||||||| Sbjct: 189741 cacatgttgctcccaaagctc 189721
>dbj|AK068203.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146A03, full insert sequence Length = 3038 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 gttgctcccaaagctccagaa 352 ||||||||||||||||||||| Sbjct: 2133 gttgctcccaaagctccagaa 2113
>dbj|AK066927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091G21, full insert sequence Length = 3011 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 gttgctcccaaagctccagaa 352 ||||||||||||||||||||| Sbjct: 2097 gttgctcccaaagctccagaa 2077
>emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC clone T2I1 (ESSA project) Length = 116763 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 311 acctgtaaagggtaaacacatgttgctcc 339 |||||||| ||||||||||||| |||||| Sbjct: 26969 acctgtaacgggtaaacacatgatgctcc 26941 Score = 40.1 bits (20), Expect = 6.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 107 taatcgagagacagatttttcttcatcgcctcataaactaggtaggtaatgcttgc 162 ||||| |||| || |||||||||||| || |||||||| | ||| || |||||||| Sbjct: 27250 taatcaagagccatatttttcttcatagcttcataaacaatgtacgtgatgcttgc 27195
>gb|BC083791.1| Rattus norvegicus similar to hypothetical protein FLJ11712, mRNA (cDNA clone MGC:94780 IMAGE:7106440), complete cds Length = 1450 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcctcgaggcatcttttaaa 430 |||||||||||||||||||| Sbjct: 95 tcctcgaggcatcttttaaa 76
>gb|AY497017.1| Pongo pygmaeus abnormal spindle-like (ASPM) gene, complete cds Length = 65389 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 47418 cattcctttatatgcagcct 47399
>gb|AY497016.1| Pan troglodytes abnormal spindle-like (ASPM) gene, complete cds Length = 66069 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 48025 cattcctttatatgcagcct 48006
>gb|AY497014.1| Gorilla gorilla abnormal spindle-like (ASPM) gene, complete cds Length = 66089 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 48053 cattcctttatatgcagcct 48034
>gb|AF183143.1| Mycteroperca microlepis microsatellite Gag023 sequence Length = 182 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ctgtaaagggtaaacacatg 332 |||||||||||||||||||| Sbjct: 165 ctgtaaagggtaaacacatg 146
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 agcctctgaattggcttgtt 287 |||||||||||||||||||| Sbjct: 5155361 agcctctgaattggcttgtt 5155342
>gb|AY486114.1| Cercopithecus aethiops ASPM protein mRNA, complete cds Length = 10428 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 7632 cattcctttatatgcagcct 7613
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 agcctctgaattggcttgtt 287 |||||||||||||||||||| Sbjct: 5148425 agcctctgaattggcttgtt 5148406
>ref|NM_018136.2| Homo sapiens asp (abnormal spindle)-like, microcephaly associated (Drosophila) (ASPM), mRNA Length = 10434 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 7632 cattcctttatatgcagcct 7613
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 agcctctgaattggcttgtt 287 |||||||||||||||||||| Sbjct: 5149670 agcctctgaattggcttgtt 5149651
>gb|AY508452.1| Pan troglodytes abnormal spindle-like (ASPM) mRNA, complete cds Length = 10434 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 7632 cattcctttatatgcagcct 7613
>gb|AY508451.1| Gorilla gorilla abnormal spindle-like (ASPM) mRNA, complete cds Length = 10371 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 7569 cattcctttatatgcagcct 7550
>gb|AY489012.1|AY488995S18 Colobus guereza ASPM (ASPM) gene, exon 18 Length = 4755 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 3567 cattcctttatatgcagcct 3548
>gb|AY488984.1|AY488967S18 Hylobates lar ASPM (ASPM) gene, exon 18 Length = 4755 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 3567 cattcctttatatgcagcct 3548
>gb|AY488956.1|AY488939S18 Pongo pygmaeus ASPM (ASPM) gene, exon 18 Length = 4755 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 3567 cattcctttatatgcagcct 3548
>gb|AY488928.1|AY488911S18 Gorilla gorilla ASPM (ASPM) gene, exon 18 Length = 4755 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 3567 cattcctttatatgcagcct 3548
>gb|AY488900.1|AY488883S18 Pan troglodytes ASPM (ASPM) gene, exon 18 Length = 4755 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 3567 cattcctttatatgcagcct 3548
>gb|AY367067.1| Pongo pygmaeus abnormal spindle-like microcephaly-associated protein (ASPM) mRNA, complete cds Length = 10416 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 7614 cattcctttatatgcagcct 7595
>gb|AY367066.1| Pan troglodytes abnormal spindle-like microcephaly-associated protein (ASPM) mRNA, complete cds Length = 10434 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 7632 cattcctttatatgcagcct 7613
>gb|AY367065.1| Homo sapiens abnormal spindle-like microcephaly-associated protein (ASPM) mRNA, complete cds Length = 10434 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 7632 cattcctttatatgcagcct 7613
>gb|AF510725.1| Penicillium nalgiovense orotidine 5'-phosphate decarboxylase (pyrG) gene, complete cds Length = 2172 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tccagaaacagtaccacaac 365 |||||||||||||||||||| Sbjct: 902 tccagaaacagtaccacaac 921
>emb|Z81089.1|CEF53H4 Caenorhabditis elegans Cosmid F53H4, complete sequence Length = 40380 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 aacaattccagaatttaatc 111 |||||||||||||||||||| Sbjct: 24212 aacaattccagaatttaatc 24193
>gb|AC103982.10| Homo sapiens chromosome 15, clone RP11-343B18, complete sequence Length = 197370 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggttctccagaacacatcag 251 |||||||||||||||||||| Sbjct: 68782 ggttctccagaacacatcag 68763
>gb|AF509326.1| Homo sapiens abnormal spindles mRNA, complete cds Length = 10434 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 7632 cattcctttatatgcagcct 7613
>ref|NM_001007007.1| Rattus norvegicus similar to hypothetical protein FLJ11712 (MGC94780), mRNA Length = 1450 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcctcgaggcatcttttaaa 430 |||||||||||||||||||| Sbjct: 95 tcctcgaggcatcttttaaa 76
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 agcctctgaattggcttgtt 287 |||||||||||||||||||| Sbjct: 5219899 agcctctgaattggcttgtt 5219880
>gb|AC159168.3| Callicebus moloch clone LB5-83N20, complete sequence Length = 182435 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 agcaggcaccactttaagga 182 |||||||||||||||||||| Sbjct: 33438 agcaggcaccactttaagga 33457
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cagaaacgccttcgtgccgt 229 |||||||||||||||||||| Sbjct: 1391069 cagaaacgccttcgtgccgt 1391088
>emb|AL353809.20| Human DNA sequence from clone RP11-32D17 on chromosome 1p31.2-32.1 Contains the 3' end of ASPM gene for asp (abnormal spindle)-like, microcephaly associated (Drosophila) protein, FLJ10517, FLJ10549, the F13B gene for coagulation factor XIII, B polypeptide and the 3' end of FHR5 gene for factor H-related protein 5, complete sequence Length = 155892 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 110947 cattcctttatatgcagcct 110966
>emb|AL122006.11|HSJ730H16 Human DNA sequence from clone RP4-730H16 on chromosome 1p13.1-13.3, complete sequence Length = 151391 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 agagacagatttttcttcat 132 |||||||||||||||||||| Sbjct: 92829 agagacagatttttcttcat 92810
>gb|AC080013.17| Homo sapiens 3 BAC RP11-379F4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163074 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 tcttgttctaataacctgta 317 |||||||||||||||||||| Sbjct: 15605 tcttgttctaataacctgta 15586
>gb|AY971957.1| Homo sapiens abnormal spindle-like microcephaly associated splice variant 2 (ASPM) mRNA, complete cds, alternatively spliced Length = 4259 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 1590 cattcctttatatgcagcct 1571
>dbj|AK095892.1| Homo sapiens cDNA FLJ38573 fis, clone HCHON2006841 Length = 2811 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 2677 cattcctttatatgcagcct 2658
>dbj|AK001379.1| Homo sapiens cDNA FLJ10517 fis, clone NT2RP2000812 Length = 3887 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 1023 cattcctttatatgcagcct 1004
>gb|AC148188.3| Saimiri boliviensis boliviensis clone CH254-64N20, complete sequence Length = 194092 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 agcaggcaccactttaagga 182 |||||||||||||||||||| Sbjct: 153465 agcaggcaccactttaagga 153484
>gb|AC158356.2| Mus musculus BAC clone RP23-475P8 from chromosome 13, complete sequence Length = 210995 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 aacacatcagacattccttt 261 |||||||||||||||||||| Sbjct: 109853 aacacatcagacattccttt 109834
>ref|NM_001008994.1| Pan troglodytes asp (abnormal spindle)-like, microcephaly associated (ASPM), mRNA Length = 10434 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 7632 cattcctttatatgcagcct 7613
>emb|BX648804.1|HSM808955 Homo sapiens mRNA; cDNA DKFZp686N06184 (from clone DKFZp686N06184) Length = 5760 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cattcctttatatgcagcct 272 |||||||||||||||||||| Sbjct: 2743 cattcctttatatgcagcct 2724
>dbj|AB100244.1| Penicillium camemberti pyrG gene for orotidine-5'-phosphate decarboxylase, complete cds Length = 2580 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tccagaaacagtaccacaac 365 |||||||||||||||||||| Sbjct: 1457 tccagaaacagtaccacaac 1476
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 agcctctgaattggcttgtt 287 |||||||||||||||||||| Sbjct: 5148299 agcctctgaattggcttgtt 5148280
>emb|CT025556.12| Mouse DNA sequence from clone RP24-91G8 on chromosome 13, complete sequence Length = 225239 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 aacacatcagacattccttt 261 |||||||||||||||||||| Sbjct: 208489 aacacatcagacattccttt 208470
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 agcaggcaccactttaagga 182 |||||||||||||||||||| Sbjct: 33438 agcaggcaccactttaagga 33457
>gb|AC151372.3| Aotus nancymaae clone CH258-368D16, complete sequence Length = 139897 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 agcaggcaccactttaagga 182 |||||||||||||||||||| Sbjct: 76468 agcaggcaccactttaagga 76487 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,713,576 Number of Sequences: 3902068 Number of extensions: 4713576 Number of successful extensions: 77790 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77569 Number of HSP's gapped (non-prelim): 216 length of query: 506 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 484 effective length of database: 17,147,199,772 effective search space: 8299244689648 effective search space used: 8299244689648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)