Clone Name | rbart34c12 |
---|---|
Clone Library Name | barley_pub |
>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific| protein ZRP3) Length = 129 Score = 62.8 bits (151), Expect = 4e-10 Identities = 28/45 (62%), Positives = 35/45 (77%) Frame = -1 Query: 453 DLDAAIRLCTAIKADVXGIHINLPIHLSLILNFCGKGVPTGFMCP 319 DLDAA+ LCTAIKA+V GIH+N+P+ L+ ILN CG+ P F CP Sbjct: 84 DLDAALCLCTAIKANVLGIHLNVPLSLNFILNNCGRICPEDFTCP 128
>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor| Length = 137 Score = 61.6 bits (148), Expect = 9e-10 Identities = 28/44 (63%), Positives = 36/44 (81%) Frame = -1 Query: 453 DLDAAIRLCTAIKADVXGIHINLPIHLSLILNFCGKGVPTGFMC 322 +L+AA+ LCTAIKA++ G ++NLPI LSL+LN CGK VP GF C Sbjct: 93 NLEAAVCLCTAIKANILGKNLNLPIALSLVLNNCGKQVPNGFEC 136
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 48.9 bits (115), Expect = 6e-06 Identities = 23/46 (50%), Positives = 31/46 (67%) Frame = -1 Query: 453 DLDAAIRLCTAIKADVXGIHINLPIHLSLILNFCGKGVPTGFMCPT 316 DLDAAI LCT I+ + I+I LPI L ++++ CGK P F CP+ Sbjct: 300 DLDAAICLCTTIRLKLLNINIILPIALQVLIDDCGKYPPKDFKCPS 345
>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)| Length = 80 Score = 35.8 bits (81), Expect = 0.052 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = -1 Query: 453 DLDAAIRLCTAIKADVXGIHINLPIHLSLILNFCGKGVPTGFMCP 319 D++A + LC ++A GI +NL +L LILN CG+ P+ CP Sbjct: 37 DIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPSNATCP 78
>FCGR1_HUMAN (P12314) High affinity immunoglobulin gamma Fc receptor I precursor| (Fc-gamma RI) (FcRI) (IgG Fc receptor I) (CD64 antigen) Length = 374 Score = 28.9 bits (63), Expect = 6.3 Identities = 14/38 (36%), Positives = 17/38 (44%) Frame = +1 Query: 76 TITTPTTSGHIPSQSKMQWPLAQATTQTFAKQYKTTKA 189 T+T H+P S QW L TQT Y+ T A Sbjct: 38 TVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSA 75
>YL278_YEAST (Q05854) Putative transcriptional regulatory protein YLR278C| Length = 1341 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/65 (27%), Positives = 30/65 (46%) Frame = +3 Query: 15 INPLNDMHLSKFNN*EKIICHDNNSNNKRTHSIAK*NAMATSTSYDSNVCETIQNN*SKA 194 I+ +N H + NN +DNN+NN ++ + N + +SN T N+ + Sbjct: 910 ISSVNREHNNNHNN-----NNDNNNNNNNNNNNSNNNNNVNNNDNESNSRSTTNNSCNNG 964 Query: 195 NN*TY 209 NN Y Sbjct: 965 NNSQY 969
>C1TC_RAT (P27653) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF| synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] Length = 934 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 5/29 (17%) Frame = -1 Query: 390 NLPI-----HLSLILNFCGKGVPTGFMCP 319 NLPI HLSL N KGVPTGF+ P Sbjct: 858 NLPICMAKTHLSLSHNPEQKGVPTGFVLP 886
>C1TC_MOUSE (Q922D8) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF| synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] Length = 934 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 5/29 (17%) Frame = -1 Query: 390 NLPI-----HLSLILNFCGKGVPTGFMCP 319 NLPI HLSL N KGVPTGF+ P Sbjct: 858 NLPICMAKTHLSLSHNPEQKGVPTGFVLP 886
>C1TC_HUMAN (P11586) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF| synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] Length = 934 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 5/29 (17%) Frame = -1 Query: 390 NLPI-----HLSLILNFCGKGVPTGFMCP 319 NLPI HLSL N KGVPTGF+ P Sbjct: 858 NLPICMAKTHLSLSHNPEQKGVPTGFILP 886
>KYK1_DICDI (P18160) Non-receptor tyrosine kinase spore lysis A (EC 2.7.10.2)| (Tyrosine-protein kinase 1) Length = 1584 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +3 Query: 75 HDNNSNNKRTHSIAK*NAMATSTSYDSNVCETIQNN*SKANN 200 ++NN+NN ++ N +S + ++N+ T NN S +NN Sbjct: 461 NNNNNNNNNNNNNNNNNNSNSSNTNNNNINNTTNNNNSNSNN 502 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,933,340 Number of Sequences: 219361 Number of extensions: 948060 Number of successful extensions: 2420 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2279 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2403 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)