ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart34c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482554.1| Oryza sativa (japonica cultivar-group), mRNA 224 2e-55
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
3dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
4dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
5dbj|AK058477.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
6ref|NM_190434.1| Oryza sativa (japonica cultivar-group), predic... 202 8e-49
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 202 8e-49
8dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic D... 202 8e-49
9dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 202 8e-49
10dbj|AK101730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 8e-49
11dbj|AK058753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 8e-49
12gb|BT017035.1| Zea mays clone EL01N0202C10.c mRNA sequence 113 6e-22
13gb|AY111013.1| Zea mays CL10083_2 mRNA sequence 113 6e-22
14gb|BT019013.1| Zea mays clone Contig506.F mRNA sequence 98 4e-17
15ref|NM_192352.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
16gb|AF444195.1| Oryza sativa malate dehydrogenase (MDH) mRNA, com... 50 0.007
17dbj|AK104770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
18dbj|AK071699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
19emb|AJ006974.1|NTA6974 Nicotiana tabacum mRNA for NAD-malate deh... 48 0.029
20gb|AF020273.1|AF020273 Medicago sativa nodule-enhanced malate de... 48 0.029
21gb|AC122184.4| Mus musculus BAC clone RP23-16C12 from chromosome... 42 1.8
22gb|AC127349.3| Mus musculus BAC clone RP23-62M5 from chromosome ... 42 1.8
23gb|AC122809.4| Mus musculus BAC clone RP23-272E5 from chromosome... 42 1.8
24gb|AC123792.4| Mus musculus BAC clone RP24-309B14 from chromosom... 42 1.8
25gb|AC121568.3| Mus musculus BAC clone RP23-226F18 from 15, compl... 42 1.8
26gb|U40799.2| Caenorhabditis elegans cosmid F42C5, complete sequence 42 1.8
27gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 42 1.8
28gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.8
29ref|NM_068762.1| Caenorhabditis elegans F42C5.5 (F42C5.5) mRNA, ... 42 1.8
30gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 40 7.2
31gb|AC132446.3| Mus musculus BAC clone RP23-175K4 from chromosome... 40 7.2
32gb|AF079850.1| Pisum sativum nodule-enhanced malate dehydrogenas... 40 7.2
33gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete... 40 7.2
34emb|Z69907.2|HSN22D1 Human DNA sequence from clone LL22NC03-22D1... 40 7.2
35emb|AL591962.15| Human DNA sequence from clone RP11-346O16 on ch... 40 7.2
36emb|AL591501.7| Human DNA sequence from clone RP11-305F18 on chr... 40 7.2
37emb|AL356255.15| Human DNA sequence from clone RP11-400D22 on ch... 40 7.2
38emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chr... 40 7.2
39emb|AL844143.17| Mouse DNA sequence from clone RP23-370D19 on ch... 40 7.2
40emb|BX470260.10| Zebrafish DNA sequence from clone CH211-125C23 ... 40 7.2
41gb|AC027239.5|AC027239 Homo sapiens chromosome 11, clone RP11-52... 40 7.2
42gb|AF294393.1|AF294393 Rattus norvegicus glycerol-3-phosphate de... 40 7.2
43gb|AC010127.12| Homo sapiens BAC clone RP11-2I8 from 2, complete... 40 7.2
44emb|Z80771.1|HS253J14 Human DNA sequence from clone RP1-253J14 o... 40 7.2
45emb|CT573098.3| RP43-076G03, complete sequence 40 7.2
46dbj|AP006437.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.2
47dbj|AP001998.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.2
48gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.2
49gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 7.2
50emb|CT573270.1| RP43-049F09, complete sequence 40 7.2
51gb|AC146688.1| Gallus gallus BAC clone CH261-24P18 from chromoso... 40 7.2
52emb|CT476802.2| Pan troglodytes chromosome X BAC RP43-021M15, co... 40 7.2
53emb|AL713863.7| Mouse DNA sequence from clone RP23-330I16 on chr... 40 7.2
54dbj|AP002439.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 7.2 
>ref|XM_482554.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1194

 Score =  224 bits (113), Expect = 2e-55
 Identities = 194/221 (87%)
 Strand = Plus / Minus

                                                                        
Query: 310  ctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttcaa 369
            |||||| ||||| || |||||||||||||||||||| ||||||||||  |||| ||||||
Sbjct: 1173 ctgctgtttgtggacgaactcgatgcccttctcgatactggccttcaactcagacttcaa 1114

                                                                        
Query: 370  tgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgga 429
            |||||| |||||||||||||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 1113 tgcctcaagtgccttggcctcgtactcggtcactccctcaaggtcagcagaaatgatgga 1054

                                                                        
Query: 430  ctcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagctc 489
            ||||||||| ||||| |||| |||||||||||| |||||||| |||||||| |||| |||
Sbjct: 1053 ctcgacaccgttctttccaagcttaactctggatgcaaagaacggcagctcggttaactc 994

                                                     
Query: 490  agactggacatacgtgcactcgtaaacatctgggtcaccag 530
            |||||| ||  | |||||||| |||||||| ||||| ||||
Sbjct: 993  agactgaacgaatgtgcactcataaacatcagggtcgccag 953
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  224 bits (113), Expect = 2e-55
 Identities = 194/221 (87%)
 Strand = Plus / Plus

                                                                            
Query: 310      ctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttcaa 369
                |||||| ||||| || |||||||||||||||||||| ||||||||||  |||| ||||||
Sbjct: 21047717 ctgctgtttgtggacgaactcgatgcccttctcgatactggccttcaactcagacttcaa 21047776

                                                                            
Query: 370      tgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgga 429
                |||||| |||||||||||||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 21047777 tgcctcaagtgccttggcctcgtactcggtcactccctcaaggtcagcagaaatgatgga 21047836

                                                                            
Query: 430      ctcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagctc 489
                ||||||||| ||||| |||| |||||||||||| |||||||| |||||||| |||| |||
Sbjct: 21047837 ctcgacaccgttctttccaagcttaactctggatgcaaagaacggcagctcggttaactc 21047896

                                                         
Query: 490      agactggacatacgtgcactcgtaaacatctgggtcaccag 530
                |||||| ||  | |||||||| |||||||| ||||| ||||
Sbjct: 21047897 agactgaacgaatgtgcactcataaacatcagggtcgccag 21047937
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>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0431A03
          Length = 149500

 Score =  224 bits (113), Expect = 2e-55
 Identities = 194/221 (87%)
 Strand = Plus / Plus

                                                                          
Query: 310    ctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttcaa 369
              |||||| ||||| || |||||||||||||||||||| ||||||||||  |||| ||||||
Sbjct: 113892 ctgctgtttgtggacgaactcgatgcccttctcgatactggccttcaactcagacttcaa 113951

                                                                          
Query: 370    tgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgga 429
              |||||| |||||||||||||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 113952 tgcctcaagtgccttggcctcgtactcggtcactccctcaaggtcagcagaaatgatgga 114011

                                                                          
Query: 430    ctcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagctc 489
              ||||||||| ||||| |||| |||||||||||| |||||||| |||||||| |||| |||
Sbjct: 114012 ctcgacaccgttctttccaagcttaactctggatgcaaagaacggcagctcggttaactc 114071

                                                       
Query: 490    agactggacatacgtgcactcgtaaacatctgggtcaccag 530
              |||||| ||  | |||||||| |||||||| ||||| ||||
Sbjct: 114072 agactgaacgaatgtgcactcataaacatcagggtcgccag 114112
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>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0413H11
          Length = 147655

 Score =  224 bits (113), Expect = 2e-55
 Identities = 194/221 (87%)
 Strand = Plus / Plus

                                                                         
Query: 310   ctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttcaa 369
             |||||| ||||| || |||||||||||||||||||| ||||||||||  |||| ||||||
Sbjct: 18927 ctgctgtttgtggacgaactcgatgcccttctcgatactggccttcaactcagacttcaa 18986

                                                                         
Query: 370   tgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgga 429
             |||||| |||||||||||||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 18987 tgcctcaagtgccttggcctcgtactcggtcactccctcaaggtcagcagaaatgatgga 19046

                                                                         
Query: 430   ctcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagctc 489
             ||||||||| ||||| |||| |||||||||||| |||||||| |||||||| |||| |||
Sbjct: 19047 ctcgacaccgttctttccaagcttaactctggatgcaaagaacggcagctcggttaactc 19106

                                                      
Query: 490   agactggacatacgtgcactcgtaaacatctgggtcaccag 530
             |||||| ||  | |||||||| |||||||| ||||| ||||
Sbjct: 19107 agactgaacgaatgtgcactcataaacatcagggtcgccag 19147
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>dbj|AK058477.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C06, full
            insert sequence
          Length = 1349

 Score =  224 bits (113), Expect = 2e-55
 Identities = 194/221 (87%)
 Strand = Plus / Minus

                                                                        
Query: 310  ctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttcaa 369
            |||||| ||||| || |||||||||||||||||||| ||||||||||  |||| ||||||
Sbjct: 1051 ctgctgtttgtggacgaactcgatgcccttctcgatactggccttcaactcagacttcaa 992

                                                                        
Query: 370  tgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgga 429
            |||||| |||||||||||||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 991  tgcctcaagtgccttggcctcgtactcggtcactccctcaaggtcagcagaaatgatgga 932

                                                                        
Query: 430  ctcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagctc 489
            ||||||||| ||||| |||| |||||||||||| |||||||| |||||||| |||| |||
Sbjct: 931  ctcgacaccgttctttccaagcttaactctggatgcaaagaacggcagctcggttaactc 872

                                                     
Query: 490  agactggacatacgtgcactcgtaaacatctgggtcaccag 530
            |||||| ||  | |||||||| |||||||| ||||| ||||
Sbjct: 871  agactgaacgaatgtgcactcataaacatcagggtcgccag 831
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>ref|NM_190434.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1215

 Score =  202 bits (102), Expect = 8e-49
 Identities = 192/222 (86%)
 Strand = Plus / Minus

                                                                        
Query: 309  cctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttca 368
            ||||||| ||||| || ||||||||||||||||| |||||||||||||  ||||||||||
Sbjct: 1198 cctgctgtttgtggacgaactcgatgcccttctcaatgctggccttcaactcaggcttca 1139

                                                                        
Query: 369  atgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgg 428
            ||| ||| || ||||||||||| || || ||||||||||| | ||||||||| |||||||
Sbjct: 1138 atgactcaagggccttggcctcatattcagtcactccctcaaggtcggaagaaatgatgg 1079

                                                                        
Query: 429  actcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagct 488
            |||| ||||||||||| |||| |||||| || || ||||||||  ||||||||||||  |
Sbjct: 1078 actcaacaccattcttaccaagcttaaccctagatgcaaagaacagcagctcagttaatt 1019

                                                      
Query: 489  cagactggacatacgtgcactcgtaaacatctgggtcaccag 530
            |||| || ||| | |||||||||||||||||||| |||||||
Sbjct: 1018 cagattgaacaaatgtgcactcgtaaacatctggatcaccag 977
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  202 bits (102), Expect = 8e-49
 Identities = 192/222 (86%)
 Strand = Plus / Minus

                                                                            
Query: 309      cctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttca 368
                ||||||| ||||| || ||||||||||||||||| |||||||||||||  ||||||||||
Sbjct: 35494748 cctgctgtttgtggacgaactcgatgcccttctcaatgctggccttcaactcaggcttca 35494689

                                                                            
Query: 369      atgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgg 428
                ||| ||| || ||||||||||| || || ||||||||||| | ||||||||| |||||||
Sbjct: 35494688 atgactcaagggccttggcctcatattcagtcactccctcaaggtcggaagaaatgatgg 35494629

                                                                            
Query: 429      actcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagct 488
                |||| ||||||||||| |||| |||||| || || ||||||||  ||||||||||||  |
Sbjct: 35494628 actcaacaccattcttaccaagcttaaccctagatgcaaagaacagcagctcagttaatt 35494569

                                                          
Query: 489      cagactggacatacgtgcactcgtaaacatctgggtcaccag 530
                |||| || ||| | |||||||||||||||||||| |||||||
Sbjct: 35494568 cagattgaacaaatgtgcactcgtaaacatctggatcaccag 35494527
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>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446G04
          Length = 143515

 Score =  202 bits (102), Expect = 8e-49
 Identities = 192/222 (86%)
 Strand = Plus / Minus

                                                                         
Query: 309   cctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttca 368
             ||||||| ||||| || ||||||||||||||||| |||||||||||||  ||||||||||
Sbjct: 24935 cctgctgtttgtggacgaactcgatgcccttctcaatgctggccttcaactcaggcttca 24876

                                                                         
Query: 369   atgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgg 428
             ||| ||| || ||||||||||| || || ||||||||||| | ||||||||| |||||||
Sbjct: 24875 atgactcaagggccttggcctcatattcagtcactccctcaaggtcggaagaaatgatgg 24816

                                                                         
Query: 429   actcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagct 488
             |||| ||||||||||| |||| |||||| || || ||||||||  ||||||||||||  |
Sbjct: 24815 actcaacaccattcttaccaagcttaaccctagatgcaaagaacagcagctcagttaatt 24756

                                                       
Query: 489   cagactggacatacgtgcactcgtaaacatctgggtcaccag 530
             |||| || ||| | |||||||||||||||||||| |||||||
Sbjct: 24755 cagattgaacaaatgtgcactcgtaaacatctggatcaccag 24714
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>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1088C09
          Length = 154084

 Score =  202 bits (102), Expect = 8e-49
 Identities = 192/222 (86%)
 Strand = Plus / Minus

                                                                          
Query: 309    cctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttca 368
              ||||||| ||||| || ||||||||||||||||| |||||||||||||  ||||||||||
Sbjct: 118697 cctgctgtttgtggacgaactcgatgcccttctcaatgctggccttcaactcaggcttca 118638

                                                                          
Query: 369    atgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgg 428
              ||| ||| || ||||||||||| || || ||||||||||| | ||||||||| |||||||
Sbjct: 118637 atgactcaagggccttggcctcatattcagtcactccctcaaggtcggaagaaatgatgg 118578

                                                                          
Query: 429    actcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagct 488
              |||| ||||||||||| |||| |||||| || || ||||||||  ||||||||||||  |
Sbjct: 118577 actcaacaccattcttaccaagcttaaccctagatgcaaagaacagcagctcagttaatt 118518

                                                        
Query: 489    cagactggacatacgtgcactcgtaaacatctgggtcaccag 530
              |||| || ||| | |||||||||||||||||||| |||||||
Sbjct: 118517 cagattgaacaaatgtgcactcgtaaacatctggatcaccag 118476
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>dbj|AK101730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061G08, full
            insert sequence
          Length = 1742

 Score =  202 bits (102), Expect = 8e-49
 Identities = 192/222 (86%)
 Strand = Plus / Minus

                                                                        
Query: 309  cctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttca 368
            ||||||| ||||| || ||||||||||||||||| |||||||||||||  ||||||||||
Sbjct: 1487 cctgctgtttgtggacgaactcgatgcccttctcaatgctggccttcaactcaggcttca 1428

                                                                        
Query: 369  atgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgg 428
            ||| ||| || ||||||||||| || || ||||||||||| | ||||||||| |||||||
Sbjct: 1427 atgactcaagggccttggcctcatattcagtcactccctcaaggtcggaagaaatgatgg 1368

                                                                        
Query: 429  actcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagct 488
            |||| ||||||||||| |||| |||||| || || ||||||||  ||||||||||||  |
Sbjct: 1367 actcaacaccattcttaccaagcttaaccctagatgcaaagaacagcagctcagttaatt 1308

                                                      
Query: 489  cagactggacatacgtgcactcgtaaacatctgggtcaccag 530
            |||| || ||| | |||||||||||||||||||| |||||||
Sbjct: 1307 cagattgaacaaatgtgcactcgtaaacatctggatcaccag 1266
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>dbj|AK058753.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H12, full
            insert sequence
          Length = 1623

 Score =  202 bits (102), Expect = 8e-49
 Identities = 192/222 (86%)
 Strand = Plus / Minus

                                                                        
Query: 309  cctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttca 368
            ||||||| ||||| || ||||||||||||||||| |||||||||||||  ||||||||||
Sbjct: 1367 cctgctgtttgtggacgaactcgatgcccttctcaatgctggccttcaactcaggcttca 1308

                                                                        
Query: 369  atgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgg 428
            ||| ||| || ||||||||||| || || ||||||||||| | ||||||||| |||||||
Sbjct: 1307 atgactcaagggccttggcctcatattcagtcactccctcaaggtcggaagaaatgatgg 1248

                                                                        
Query: 429  actcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagct 488
            |||| ||||||||||| |||| |||||| || || ||||||||  ||||||||||||  |
Sbjct: 1247 actcaacaccattcttaccaagcttaaccctagatgcaaagaacagcagctcagttaatt 1188

                                                      
Query: 489  cagactggacatacgtgcactcgtaaacatctgggtcaccag 530
            |||| || ||| | |||||||||||||||||||| |||||||
Sbjct: 1187 cagattgaacaaatgtgcactcgtaaacatctggatcaccag 1146
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>gb|BT017035.1| Zea mays clone EL01N0202C10.c mRNA sequence
          Length = 663

 Score =  113 bits (57), Expect = 6e-22
 Identities = 153/185 (82%)
 Strand = Plus / Minus

                                                                       
Query: 335 cccttctcgatgctggccttcagttcaggcttcaatgcctcgagtgccttggcctcgtac 394
           |||||||| ||||| |||||||  || | |||||  ||||| |||||||||||||| |||
Sbjct: 324 cccttctcaatgcttgccttcaactcggccttcagcgcctcaagtgccttggcctcatac 265

                                                                       
Query: 395 tcggtcactccctccaagtcggaagagatgatggactcgacaccattcttcccaatctta 454
           || |||| |||||  | ||||| ||| |||| |||||| ||||||||||| || | ||| 
Sbjct: 264 tcagtcattccctggaggtcggcagaaatgacggactcaacaccattcttgcccaacttg 205

                                                                       
Query: 455 actctggacgcaaagaatggcagctcagttagctcagactggacatacgtgcactcgtaa 514
           ||||| || || ||||||||||| ||||||| ||||||||| ||| | |||||||| |||
Sbjct: 204 actcttgatgcgaagaatggcaggtcagttatctcagactgaacaaatgtgcactcataa 145

                
Query: 515 acatc 519
           |||||
Sbjct: 144 acatc 140



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 209 actctaggctgcaaaacttaa 229
           |||||||||||||||||||||
Sbjct: 435 actctaggctgcaaaacttaa 415
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>gb|AY111013.1| Zea mays CL10083_2 mRNA sequence
          Length = 619

 Score =  113 bits (57), Expect = 6e-22
 Identities = 153/185 (82%)
 Strand = Plus / Plus

                                                                       
Query: 335 cccttctcgatgctggccttcagttcaggcttcaatgcctcgagtgccttggcctcgtac 394
           |||||||| ||||| |||||||  || | |||||  ||||| |||||||||||||| |||
Sbjct: 314 cccttctcaatgcttgccttcaactcggccttcagcgcctcaagtgccttggcctcatac 373

                                                                       
Query: 395 tcggtcactccctccaagtcggaagagatgatggactcgacaccattcttcccaatctta 454
           || |||| |||||  | ||||| ||| |||| |||||| ||||||||||| || | ||| 
Sbjct: 374 tcagtcattccctggaggtcggcagaaatgacggactcaacaccattcttgcccaacttg 433

                                                                       
Query: 455 actctggacgcaaagaatggcagctcagttagctcagactggacatacgtgcactcgtaa 514
           ||||| || || ||||||||||| ||||||| ||||||||| ||| | |||||||| |||
Sbjct: 434 actcttgatgcgaagaatggcaggtcagttatctcagactgaacaaatgtgcactcataa 493

                
Query: 515 acatc 519
           |||||
Sbjct: 494 acatc 498



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 ctctaggctgcaaaacttaa 229
           ||||||||||||||||||||
Sbjct: 204 ctctaggctgcaaaacttaa 223
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>gb|BT019013.1| Zea mays clone Contig506.F mRNA sequence
          Length = 1147

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 124/149 (83%)
 Strand = Plus / Minus

                                                                       
Query: 380 gccttggcctcgtactcggtcactccctccaagtcggaagagatgatggactcgacacca 439
           |||||||||||| |||||||||||||||| | ||||| ||| | |||||| |||||||||
Sbjct: 708 gccttggcctcgcactcggtcactccctcgaggtcggcagaaacgatggattcgacacca 649

                                                                       
Query: 440 ttcttcccaatcttaactctggacgcaaagaatggcagctcagttagctcagactggaca 499
            |||| || | ||| ||||| |  || ||||||||||| || |||  ||| ||||||| |
Sbjct: 648 ctcttgccgagcttgactcttgttgcgaagaatggcagatcggttgcctcggactggata 589

                                        
Query: 500 tacgtgcactcgtaaacatctgggtcacc 528
            | ||||||||||||||||| ||||||||
Sbjct: 588 aatgtgcactcgtaaacatcggggtcacc 560



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 209 actctaggctgcaaaacttaa 229
           |||||||||||||||||||||
Sbjct: 881 actctaggctgcaaaacttaa 861
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>ref|NM_192352.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1023

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 437 ccattcttcccaatcttaactctggacgcaaagaatggcagctcagtta 485
           ||||||||||||| ||| ||  |||| ||||||||||||||||| ||||
Sbjct: 905 ccattcttcccaagcttcaccttggaggcaaagaatggcagctctgtta 857
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>gb|AF444195.1| Oryza sativa malate dehydrogenase (MDH) mRNA, complete cds; nuclear
           gene for mitochondrial product
          Length = 1257

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 437 ccattcttcccaatcttaactctggacgcaaagaatggcagctcagtta 485
           ||||||||||||| ||| ||  |||| ||||||||||||||||| ||||
Sbjct: 921 ccattcttcccaagcttcaccttggaggcaaagaatggcagctctgtta 873
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>dbj|AK104770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A07, full
           insert sequence
          Length = 1279

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 437 ccattcttcccaatcttaactctggacgcaaagaatggcagctcagtta 485
           ||||||||||||| ||| ||  |||| ||||||||||||||||| ||||
Sbjct: 963 ccattcttcccaagcttcaccttggaggcaaagaatggcagctctgtta 915
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>dbj|AK071699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108E15, full
            insert sequence
          Length = 1369

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 437  ccattcttcccaatcttaactctggacgcaaagaatggcagctcagtta 485
            ||||||||||||| ||| ||  |||| ||||||||||||||||| ||||
Sbjct: 1037 ccattcttcccaagcttcaccttggaggcaaagaatggcagctctgtta 989
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>emb|AJ006974.1|NTA6974 Nicotiana tabacum mRNA for NAD-malate dehydrogenase
          Length = 1476

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 464  gcaaagaatggcagctcagttagctcagactggaca 499
            ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 1085 gcaaagaatggaagctctgttaggtcagactggaca 1050
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>gb|AF020273.1|AF020273 Medicago sativa nodule-enhanced malate dehydrogenase precursor
            (nemdh) mRNA, complete cds
          Length = 1645

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 335  cccttctcgatgctggccttcagttcaggctt 366
            |||||||||||||||||||| ||||| |||||
Sbjct: 1225 cccttctcgatgctggccttaagttctggctt 1194
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>gb|AC122184.4| Mus musculus BAC clone RP23-16C12 from chromosome 7, complete sequence
          Length = 222122

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 211    tctaggctgcaaaacttaaga 231
              |||||||||||||||||||||
Sbjct: 210029 tctaggctgcaaaacttaaga 210049
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>gb|AC127349.3| Mus musculus BAC clone RP23-62M5 from chromosome 13, complete sequence
          Length = 193255

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 217    ctgcaaaacttaagacgagga 237
              |||||||||||||||||||||
Sbjct: 117192 ctgcaaaacttaagacgagga 117212
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>gb|AC122809.4| Mus musculus BAC clone RP23-272E5 from chromosome 7, complete sequence
          Length = 205725

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 211    tctaggctgcaaaacttaaga 231
              |||||||||||||||||||||
Sbjct: 154735 tctaggctgcaaaacttaaga 154715
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>gb|AC123792.4| Mus musculus BAC clone RP24-309B14 from chromosome 7, complete sequence
          Length = 162493

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 353    ttcagttcaggcttcaatgcc 373
              |||||||||||||||||||||
Sbjct: 135986 ttcagttcaggcttcaatgcc 135966
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>gb|AC121568.3| Mus musculus BAC clone RP23-226F18 from 15, complete sequence
          Length = 207297

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 237    acaatcattttgcctttattctctt 261
              |||||||||||||||||||| ||||
Sbjct: 181527 acaatcattttgcctttattttctt 181551
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>gb|U40799.2| Caenorhabditis elegans cosmid F42C5, complete sequence
          Length = 41551

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 498  catacgtgcactcgtaaacat 518
            |||||||||||||||||||||
Sbjct: 7613 catacgtgcactcgtaaacat 7593
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 175     ctccagggcatactccttcct 195
               |||||||||||||||||||||
Sbjct: 1926637 ctccagggcatactccttcct 1926657
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 336    ccttctcgatgctggccttca 356
              |||||||||||||||||||||
Sbjct: 243207 ccttctcgatgctggccttca 243187
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>ref|NM_068762.1| Caenorhabditis elegans F42C5.5 (F42C5.5) mRNA, complete cds
          Length = 972

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 498 catacgtgcactcgtaaacat 518
           |||||||||||||||||||||
Sbjct: 808 catacgtgcactcgtaaacat 828
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>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 9      tgcttttattattattccacggtt 32
              ||||||| ||||||||||||||||
Sbjct: 755451 tgcttttcttattattccacggtt 755474
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>gb|AC132446.3| Mus musculus BAC clone RP23-175K4 from chromosome 12, complete sequence
          Length = 190088

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     caaatgcttttattattatt 24
             ||||||||||||||||||||
Sbjct: 91028 caaatgcttttattattatt 91047
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>gb|AF079850.1| Pisum sativum nodule-enhanced malate dehydrogenase (nemdh) mRNA,
            complete cds
          Length = 1510

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 335  cccttctcgatgctggccttcagttcaggctt 366
            ||||||||||| |||||||| ||||| |||||
Sbjct: 1263 cccttctcgatactggccttaagttctggctt 1232
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>gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete sequence
          Length = 209021

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    tttgcctttattctcttcat 264
              ||||||||||||||||||||
Sbjct: 200356 tttgcctttattctcttcat 200375
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>emb|Z69907.2|HSN22D1 Human DNA sequence from clone LL22NC03-22D1 on chromosome 22 Contains
             STSs and GSSs, complete sequence
          Length = 37813

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     caaatgcttttattattatt 24
             ||||||||||||||||||||
Sbjct: 11981 caaatgcttttattattatt 11962
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>emb|AL591962.15| Human DNA sequence from clone RP11-346O16 on chromosome 6, complete
             sequence
          Length = 86881

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   accattcttcccaatcttaa 455
             ||||||||||||||||||||
Sbjct: 19238 accattcttcccaatcttaa 19257
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>emb|AL591501.7| Human DNA sequence from clone RP11-305F18 on chromosome X Contains the 3'
              end of a novel gene, complete sequence
          Length = 174803

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    aactgagaaatatatctgct 176
              ||||||||||||||||||||
Sbjct: 107816 aactgagaaatatatctgct 107835
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>emb|AL356255.15| Human DNA sequence from clone RP11-400D22 on chromosome 10 Contains
             part of the gene for  VPS10 domain receptor protein SORCS
             1 and a CpG island, complete sequence
          Length = 116139

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 299   gcggtggctccctgctgcttgtgc 322
             ||||||||||||||| ||||||||
Sbjct: 97119 gcggtggctccctgcagcttgtgc 97096
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>emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chromosome 4 Contains part of
              the Ptprd gene for receptor type protein tyrosine
              phosphatase D and a CpG island, complete sequence
          Length = 199012

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    tttgcctttattctcttcat 264
              ||||||||||||||||||||
Sbjct: 157713 tttgcctttattctcttcat 157732
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>emb|AL844143.17| Mouse DNA sequence from clone RP23-370D19 on chromosome 4, complete
              sequence
          Length = 159305

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      aacaaatgcttttattatta 22
              ||||||||||||||||||||
Sbjct: 107377 aacaaatgcttttattatta 107396
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>emb|BX470260.10| Zebrafish DNA sequence from clone CH211-125C23 in linkage group 14,
            complete sequence
          Length = 66554

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    caaatgcttttattattatt 24
            ||||||||||||||||||||
Sbjct: 5697 caaatgcttttattattatt 5716
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>gb|AC027239.5|AC027239 Homo sapiens chromosome 11, clone RP11-528L6, complete sequence
          Length = 196857

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   aggacaatcattttgccttt 253
             ||||||||||||||||||||
Sbjct: 58055 aggacaatcattttgccttt 58074
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>gb|AF294393.1|AF294393 Rattus norvegicus glycerol-3-phosphate dehydrogenase gene, promoters A
             and B and exons 1a and 1b; nuclear gene for mitochondrial
             product
          Length = 13425

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 67    aatgtgtcaaacaaaataaggccc 90
             |||||||||||||||||| |||||
Sbjct: 13319 aatgtgtcaaacaaaatatggccc 13296
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>gb|AC010127.12| Homo sapiens BAC clone RP11-2I8 from 2, complete sequence
          Length = 190066

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   aactgagaaatatatctgct 176
             ||||||||||||||||||||
Sbjct: 26005 aactgagaaatatatctgct 26024
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>emb|Z80771.1|HS253J14 Human DNA sequence from clone RP1-253J14 on chromosome X, complete
             sequence
          Length = 82225

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 13    tttattattattccacggtttgtc 36
             |||||||||||| |||||||||||
Sbjct: 58451 tttattattatttcacggtttgtc 58474
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>emb|CT573098.3| RP43-076G03, complete sequence
          Length = 175456

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   aactgagaaatatatctgct 176
             ||||||||||||||||||||
Sbjct: 97436 aactgagaaatatatctgct 97455
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>dbj|AP006437.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-674C21, complete
             sequence
          Length = 171400

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   aggacaatcattttgccttt 253
             ||||||||||||||||||||
Sbjct: 32666 aggacaatcattttgccttt 32685
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>dbj|AP001998.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-367C21, complete
              sequence
          Length = 161529

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    aggacaatcattttgccttt 253
              ||||||||||||||||||||
Sbjct: 151109 aggacaatcattttgccttt 151128
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 464     gcaaagaatggcagctcagt 483
               ||||||||||||||||||||
Sbjct: 2869147 gcaaagaatggcagctcagt 2869128
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 242     cattttgcctttattctctt 261
               ||||||||||||||||||||
Sbjct: 5336682 cattttgcctttattctctt 5336701
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>emb|CT573270.1| RP43-049F09, complete sequence
          Length = 165723

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  aactgagaaatatatctgct 176
            ||||||||||||||||||||
Sbjct: 9398 aactgagaaatatatctgct 9417
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>gb|AC146688.1| Gallus gallus BAC clone CH261-24P18 from chromosome unknown, complete
             sequence
          Length = 212571

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    ttattattattccacggttt 33
             ||||||||||||||||||||
Sbjct: 99213 ttattattattccacggttt 99232
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>emb|CT476802.2| Pan troglodytes chromosome X BAC RP43-021M15, complete sequence
          Length = 172650

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    aactgagaaatatatctgct 176
              ||||||||||||||||||||
Sbjct: 159470 aactgagaaatatatctgct 159489
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>emb|AL713863.7| Mouse DNA sequence from clone RP23-330I16 on chromosome X, complete
              sequence
          Length = 203422

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      aaacaaatgcttttattatt 21
              ||||||||||||||||||||
Sbjct: 101223 aaacaaatgcttttattatt 101242
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>dbj|AP002439.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-691H4, complete
              sequence
          Length = 188604

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      aaatgcttttattattattc 25
              ||||||||||||||||||||
Sbjct: 110122 aaatgcttttattattattc 110141


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,139,565
Number of Sequences: 3902068
Number of extensions: 6139565
Number of successful extensions: 93992
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93806
Number of HSP's gapped (non-prelim): 186
length of query: 530
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 507
effective length of database: 17,143,297,704
effective search space: 8691651935928
effective search space used: 8691651935928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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