Clone Name | rbart34c08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | LDH_BACSU (P13714) L-lactate dehydrogenase (EC 1.1.1.27) (L-LDH) | 29 | 4.0 | 2 | HHAT_MOUSE (Q8BMT9) Protein-cysteine N-palmitoyltransferase HHAT... | 28 | 8.8 |
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>LDH_BACSU (P13714) L-lactate dehydrogenase (EC 1.1.1.27) (L-LDH)| Length = 320 Score = 28.9 bits (63), Expect = 4.0 Identities = 8/18 (44%), Positives = 14/18 (77%) Frame = -1 Query: 109 AFATYETCREIGVVCVCA 56 ++ TYE C++ +VC+CA Sbjct: 64 SYGTYEDCKDADIVCICA 81
>HHAT_MOUSE (Q8BMT9) Protein-cysteine N-palmitoyltransferase HHAT (EC 2.3.1.-)| (Hedgehog acyltransferase) (Skinny hedgehog protein) Length = 499 Score = 27.7 bits (60), Expect = 8.8 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -2 Query: 177 PPRASPTASPFNLSHRHPWM 118 PP A PT S SH +PW+ Sbjct: 191 PPSAQPTPSAQGASHSYPWL 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,895,047 Number of Sequences: 219361 Number of extensions: 453684 Number of successful extensions: 1145 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1130 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1145 length of database: 80,573,946 effective HSP length: 34 effective length of database: 73,115,672 effective search space used: 1754776128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)