ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart34c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK073896.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 7e-34
2gb|AY104704.1| Zea mays PCO133361 mRNA sequence 96 1e-16
3gb|BT017489.1| Zea mays clone EL01N0413B02.c mRNA sequence 94 5e-16
4gb|AY596558.1| Saccharum officinarum clone SCVPRT2074F10, comple... 88 3e-14
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 80 8e-12
6dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 80 8e-12
7gb|AY105502.1| Zea mays PCO135520 mRNA sequence 76 1e-10
8gb|AC147712.17| Medicago truncatula clone mth2-34f1, complete se... 44 0.45
9emb|CT009511.9| M.truncatula DNA sequence from clone MTH2-69I7 o... 44 0.45
10ref|XM_359981.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.8
11gb|BT014353.1| Lycopersicon esculentum clone 133630F, mRNA sequence 42 1.8
12emb|BX510306.17| Zebrafish DNA sequence from clone CH211-195F19 ... 42 1.8
13gb|AC132949.4| Mus musculus BAC clone RP24-547H18 from chromosom... 42 1.8
14ref|NM_174370.2| Bos taurus inositol 1,4,5-triphosphate receptor... 40 7.0
15ref|XM_391186.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 7.0
16ref|XM_858469.1| PREDICTED: Canis familiaris similar to Inositol... 40 7.0
17ref|XM_538867.2| PREDICTED: Canis familiaris similar to Inositol... 40 7.0
18emb|CR705766.2|CNS0G7IQ Tetraodon nigroviridis full-length cDNA 40 7.0
19gb|AY358456.1| Homo sapiens clone DNA40571 EDTP308 (UNQ308) mRNA... 40 7.0
20ref|NM_002224.1| Homo sapiens inositol 1,4,5-triphosphate recept... 40 7.0
21dbj|AK093524.1| Homo sapiens cDNA FLJ36205 fis, clone TESTI20286... 40 7.0
22gb|AF402601.1| Bos taurus inositol 1,4,5-trisphosphate receptor ... 40 7.0
23ref|XM_686252.1| PREDICTED: Danio rerio similar to solute carrie... 40 7.0
24ref|NM_001039503.1| Homo sapiens polyserase 3 (LOC339105), mRNA 40 7.0
25gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 7.0
26gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 7.0
27gb|AC108028.4| Homo sapiens BAC clone RP11-72E18 from 4, complet... 40 7.0
28gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, com... 40 7.0
29gb|AC079395.6| Homo sapiens BAC clone RP11-219H23 from 2, comple... 40 7.0
30gb|AC087591.2| Homo sapiens chromosome 3 clone RP11-95M5 map 3p,... 40 7.0
31gb|AC090957.1| Homo sapiens chromosome 3 clone RP11-708D1 map 3p... 40 7.0
32dbj|AK131087.1| Homo sapiens mRNA for FLJ00289 protein 40 7.0
33dbj|D26351.1|HUMHT3I Homo sapiens mRNA for type 3 inositol 1,4,5... 40 7.0
34emb|AJ627035.1| Homo sapiens mRNA for polyserase-3 40 7.0
35gb|U01062.1|HUMIP3R3 Human type 3 inositol 1,4,5-trisphosphate r... 40 7.0
36dbj|AB209739.1| Homo sapiens mRNA for Inositol 1,4,5-trisphospha... 40 7.0
37emb|AL832807.1|HSM804118 Homo sapiens mRNA; cDNA DKFZp667O0323 (... 40 7.0

>dbj|AK073896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072G12, full
            insert sequence
          Length = 1456

 Score =  153 bits (77), Expect = 7e-34
 Identities = 182/217 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  tagaagacgtccgggttgtagcgcccgggcatggagctgctctgctgggcctgcttcaga 305
            ||||||||||| || ||| || ||||||| |||||| || ||||||| ||||||||||||
Sbjct: 1028 tagaagacgtcaggattgaagtgcccggggatggagttgttctgctgagcctgcttcaga 969

                                                                        
Query: 306  tgcatctgcagcgcgtagttgttgatctcaagagtcctcagctgctcctggtactgcagg 365
            ||||||  |||||| |||||||| ||||| || |||||||| ||||||||||||||||  
Sbjct: 968  tgcatcgtcagcgcatagttgtttatctctagggtcctcagttgctcctggtactgcaca 909

                                                                        
Query: 366  acgagctgcttcaggccctgcacctcgtggctgcgctcgtcgaactccttctgtcgctca 425
            || || |||||||  | ||| ||||| ||||| | ||||||||||||||| || ||||||
Sbjct: 908  acaagttgcttcaaactctgaacctcctggctcctctcgtcgaactccttttggcgctca 849

                                                 
Query: 426  tgctggattgccaccgcgcgcttcaggaccgcgttct 462
            || || || || ||||| ||||| ||||| |||||||
Sbjct: 848  tgttgaatggcgaccgctcgcttgaggacagcgttct 812



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>gb|AY104704.1| Zea mays PCO133361 mRNA sequence
          Length = 1333

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 204/256 (79%)
 Strand = Plus / Minus

                                                                        
Query: 258  gggttgtagcgcccgggcatggagctgctctgctgggcctgcttcagatgcatctgcagc 317
            |||||| | ||||| || ||||||||| |||| || |||||||| ||||||||    || 
Sbjct: 1106 gggttgaaacgcccaggtatggagctgttctgttgagcctgcttgagatgcattgtgagg 1047

                                                                        
Query: 318  gcgtagttgttgatctcaagagtcctcagctgctcctggtactgcaggacgagctgcttc 377
            ||||||||||| ||||| |||||||| |  ||||||||||||||||| || || ||||||
Sbjct: 1046 gcgtagttgttcatctctagagtcctaacttgctcctggtactgcagaacaagttgcttc 987

                                                                        
Query: 378  aggccctgcacctcgtggctgcgctcgtcgaactccttctgtcgctcatgctggattgcc 437
            | |  ||| ||||||||    | ||||||||||||||| || ||||| ||||| || || 
Sbjct: 986  aagttctggacctcgtgagacctctcgtcgaactccttttggcgctcgtgctgaatggcg 927

                                                                        
Query: 438  accgcgcgcttcaggaccgcgttctgcgacaggacggccgtcatctgctccttgagcatc 497
            || || |||||||| || | |||||    ||| ||  | |||| ||||||||||||||||
Sbjct: 926  actgcccgcttcagcacggagttctctcgcagaacaacagtcaactgctccttgagcatc 867

                            
Query: 498  atgttctcctgatgca 513
            ||||| |||| |||||
Sbjct: 866  atgttttccttatgca 851



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>gb|BT017489.1| Zea mays clone EL01N0413B02.c mRNA sequence
          Length = 1134

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 197/247 (79%)
 Strand = Plus / Minus

                                                                       
Query: 267 cgcccgggcatggagctgctctgctgggcctgcttcagatgcatctgcagcgcgtagttg 326
           ||||| || ||||||||| |||| || |||||||| ||||||||    || |||||||||
Sbjct: 895 cgcccaggtatggagctgttctgttgagcctgcttgagatgcattgtgagggcgtagttg 836

                                                                       
Query: 327 ttgatctcaagagtcctcagctgctcctggtactgcaggacgagctgcttcaggccctgc 386
           || ||||| |||||||| |  ||||||||||||||||| || || ||||||| |  ||| 
Sbjct: 835 ttcatctctagagtcctaacttgctcctggtactgcagaacaagttgcttcaagttctgg 776

                                                                       
Query: 387 acctcgtggctgcgctcgtcgaactccttctgtcgctcatgctggattgccaccgcgcgc 446
           ||||||||    | ||||||||||||||| || ||||| ||||| || || || || |||
Sbjct: 775 acctcgtgagacctctcgtcgaactccttttggcgctcgtgctgaatggcgactgcccgc 716

                                                                       
Query: 447 ttcaggaccgcgttctgcgacaggacggccgtcatctgctccttgagcatcatgttctcc 506
           ||||| || | |||||    ||| ||  | |||| ||||||||||||||||||||| |||
Sbjct: 715 ttcagcacggagttctctcgcagaacaacagtcaactgctccttgagcatcatgttttcc 656

                  
Query: 507 tgatgca 513
           | |||||
Sbjct: 655 ttatgca 649



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>gb|AY596558.1| Saccharum officinarum clone SCVPRT2074F10, complete sequence
          Length = 1366

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 212/268 (79%)
 Strand = Plus / Plus

                                                                       
Query: 246 tagaagacgtccgggttgtagcgcccgggcatggagctgctctgctgggcctgcttcaga 305
           |||||||| ||||||||| | ||||| || ||||||||| ||||||| |||||||| || 
Sbjct: 236 tagaagacatccgggttgaaacgcccaggtatggagctgttctgctgagcctgcttgagg 295

                                                                       
Query: 306 tgcatctgcagcgcgtagttgttgatctcaagagtcctcagctgctcctggtactgcagg 365
           |||||    || || |||||||| ||||| || ||||| || ||||||||||||||||  
Sbjct: 296 tgcattgtgagggcatagttgtttatctctagggtcctaagttgctcctggtactgcaaa 355

                                                                       
Query: 366 acgagctgcttcaggccctgcacctcgtggctgcgctcgtcgaactccttctgtcgctca 425
           || || ||||||| || ||| ||||||||    | |||||| |||||||| || ||||||
Sbjct: 356 acaagttgcttcaagctctggacctcgtgagacctctcgtcaaactccttttggcgctca 415

                                                                       
Query: 426 tgctggattgccaccgcgcgcttcaggaccgcgttctgcgacaggacggccgtcatctgc 485
           || || || || || || |||||||| || || ||||    ||| ||  | ||||  |||
Sbjct: 416 tgttgaatggcaactgcccgcttcagcacagcattctctcgcagaacaacagtcagttgc 475

                                       
Query: 486 tccttgagcatcatgttctcctgatgca 513
           ||||||||||||||||| |||| |||||
Sbjct: 476 tccttgagcatcatgttttccttatgca 503



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 103/124 (83%)
 Strand = Plus / Plus

                                                                            
Query: 339      gtcctcagctgctcctggtactgcaggacgagctgcttcaggccctgcacctcgtggctg 398
                |||||||| ||||||||||||||||  || || |||||||  | ||| ||||| ||||| 
Sbjct: 25800508 gtcctcagttgctcctggtactgcacaacaagttgcttcaaactctgaacctcctggctc 25800567

                                                                            
Query: 399      cgctcgtcgaactccttctgtcgctcatgctggattgccaccgcgcgcttcaggaccgcg 458
                | ||||||||||||||| || |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 25800568 ctctcgtcgaactccttttggcgctcatgttgaatggcgaccgctcgcttgaggacagcg 25800627

                    
Query: 459      ttct 462
                ||||
Sbjct: 25800628 ttct 25800631



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                            
Query: 246      tagaagacgtccgggttgtagcgcccgggcatggagctgctctgctgggcctgcttcaga 305
                ||||||||||| || ||| || ||||||| |||||| || ||||||| ||||||||||||
Sbjct: 25800318 tagaagacgtcaggattgaagtgcccggggatggagttgttctgctgagcctgcttcaga 25800377

                                            
Query: 306      tgcatctgcagcgcgtagttgttgatct 333
                ||||||  |||||| |||||||| ||||
Sbjct: 25800378 tgcatcgtcagcgcatagttgtttatct 25800405



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>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0416A11
          Length = 171519

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 103/124 (83%)
 Strand = Plus / Plus

                                                                         
Query: 339   gtcctcagctgctcctggtactgcaggacgagctgcttcaggccctgcacctcgtggctg 398
             |||||||| ||||||||||||||||  || || |||||||  | ||| ||||| ||||| 
Sbjct: 82712 gtcctcagttgctcctggtactgcacaacaagttgcttcaaactctgaacctcctggctc 82771

                                                                         
Query: 399   cgctcgtcgaactccttctgtcgctcatgctggattgccaccgcgcgcttcaggaccgcg 458
             | ||||||||||||||| || |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 82772 ctctcgtcgaactccttttggcgctcatgttgaatggcgaccgctcgcttgaggacagcg 82831

                 
Query: 459   ttct 462
             ||||
Sbjct: 82832 ttct 82835



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                         
Query: 246   tagaagacgtccgggttgtagcgcccgggcatggagctgctctgctgggcctgcttcaga 305
             ||||||||||| || ||| || ||||||| |||||| || ||||||| ||||||||||||
Sbjct: 82522 tagaagacgtcaggattgaagtgcccggggatggagttgttctgctgagcctgcttcaga 82581

                                         
Query: 306   tgcatctgcagcgcgtagttgttgatct 333
             ||||||  |||||| |||||||| ||||
Sbjct: 82582 tgcatcgtcagcgcatagttgtttatct 82609



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>gb|AY105502.1| Zea mays PCO135520 mRNA sequence
          Length = 835

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 155/194 (79%)
 Strand = Plus / Minus

                                                                       
Query: 258 gggttgtagcgcccgggcatggagctgctctgctgggcctgcttcagatgcatctgcagc 317
           |||||| | ||||| || ||||||||||||||||| |||||||| || |||||    || 
Sbjct: 533 gggttgaaacgcccaggaatggagctgctctgctgagcctgcttgaggtgcattgtgagg 474

                                                                       
Query: 318 gcgtagttgttgatctcaagagtcctcagctgctcctggtactgcaggacgagctgcttc 377
           || |||||||| ||||| || ||||| |  ||||||||||||||||  || || ||||||
Sbjct: 473 gcatagttgtttatctctagtgtcctaacttgctcctggtactgcaaaacaagttgcttc 414

                                                                       
Query: 378 aggccctgcacctcgtggctgcgctcgtcgaactccttctgtcgctcatgctggattgcc 437
           | || ||| ||||||||    | |||||| |||||||| || |||||||| || || || 
Sbjct: 413 aagctctggacctcgtgagacctctcgtcaaactccttttggcgctcatgttgaatggca 354

                         
Query: 438 accgcgcgcttcag 451
           ||||| ||||||||
Sbjct: 353 accgcccgcttcag 340



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>gb|AC147712.17| Medicago truncatula clone mth2-34f1, complete sequence
          Length = 136410

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 143    caacattttctagtcatcttca 164
              ||||||||||||||||||||||
Sbjct: 130219 caacattttctagtcatcttca 130198



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>emb|CT009511.9| M.truncatula DNA sequence from clone MTH2-69I7 on chromosome 3,
             complete sequence
          Length = 116999

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 143   caacattttctagtcatcttca 164
             ||||||||||||||||||||||
Sbjct: 13601 caacattttctagtcatcttca 13580



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>ref|XM_359981.1| Magnaporthe grisea 70-15 hypothetical protein (MG05356.4) partial
            mRNA
          Length = 3288

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 365  gacgagctgcttcaggccctg 385
            |||||||||||||||||||||
Sbjct: 2346 gacgagctgcttcaggccctg 2326



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>gb|BT014353.1| Lycopersicon esculentum clone 133630F, mRNA sequence
          Length = 1423

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 321  tagttgttgatctcaagagtcctcagctgctcctggtactg 361
            ||||| |||| |||||| || || |||||||||||||||||
Sbjct: 1015 tagttattgacctcaagggttctaagctgctcctggtactg 975



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>emb|BX510306.17| Zebrafish DNA sequence from clone CH211-195F19 in linkage group 13,
             complete sequence
          Length = 194184

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   aacattttctagtcatcttca 164
             |||||||||||||||||||||
Sbjct: 29610 aacattttctagtcatcttca 29590



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>gb|AC132949.4| Mus musculus BAC clone RP24-547H18 from chromosome 7, complete sequence
          Length = 206116

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 209   agggccagggctcatcaacat 229
             |||||||||||||||||||||
Sbjct: 76677 agggccagggctcatcaacat 76657



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>ref|NM_174370.2| Bos taurus inositol 1,4,5-triphosphate receptor, type 3 (ITPR3), mRNA
          Length = 8294

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  ccgtcatctgctccttgagc 494
            ||||||||||||||||||||
Sbjct: 7947 ccgtcatctgctccttgagc 7928



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>ref|XM_391186.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG11010.1)
            partial mRNA
          Length = 3237

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   gtcagcaaaccaacatccac 118
            ||||||||||||||||||||
Sbjct: 1612 gtcagcaaaccaacatccac 1631



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>ref|XM_858469.1| PREDICTED: Canis familiaris similar to Inositol 1,4,5-trisphosphate
           receptor type 3 (Type 3 inositol 1,4,5-trisphosphate
           receptor) (Type 3 InsP3 receptor) (IP3 receptor isoform
           3) (InsP3R3), transcript variant 2 (LOC481746), mRNA
          Length = 1377

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 475 ccgtcatctgctccttgagc 494
           ||||||||||||||||||||
Sbjct: 404 ccgtcatctgctccttgagc 385



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>ref|XM_538867.2| PREDICTED: Canis familiaris similar to Inositol 1,4,5-trisphosphate
            receptor type 3 (Type 3 inositol 1,4,5-trisphosphate
            receptor) (Type 3 InsP3 receptor) (IP3 receptor isoform
            3) (InsP3R3), transcript variant 1 (LOC481746), mRNA
          Length = 8855

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  ccgtcatctgctccttgagc 494
            ||||||||||||||||||||
Sbjct: 7882 ccgtcatctgctccttgagc 7863



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>emb|CR705766.2|CNS0G7IQ Tetraodon nigroviridis full-length cDNA
          Length = 550

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 402 tcgtcgaactccttctgtcgctcatgct 429
           ||||||| ||||||||||||||| ||||
Sbjct: 543 tcgtcgatctccttctgtcgctcctgct 516



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>gb|AY358456.1| Homo sapiens clone DNA40571 EDTP308 (UNQ308) mRNA, complete cds
          Length = 2365

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 360  tgcaggacgagctgcttcaggccc 383
            ||||||| ||||||||||||||||
Sbjct: 1461 tgcaggatgagctgcttcaggccc 1438



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>ref|NM_002224.1| Homo sapiens inositol 1,4,5-triphosphate receptor, type 3 (ITPR3),
            mRNA
          Length = 8833

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  ccgtcatctgctccttgagc 494
            ||||||||||||||||||||
Sbjct: 7990 ccgtcatctgctccttgagc 7971



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>dbj|AK093524.1| Homo sapiens cDNA FLJ36205 fis, clone TESTI2028659, highly similar to
            Human type 3 inositol 1,4,5-trisphosphate receptor
            (ITPR3) mRNA
          Length = 1901

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  ccgtcatctgctccttgagc 494
            ||||||||||||||||||||
Sbjct: 1059 ccgtcatctgctccttgagc 1040



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>gb|AF402601.1| Bos taurus inositol 1,4,5-trisphosphate receptor type 3 mRNA,
            complete cds
          Length = 8294

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  ccgtcatctgctccttgagc 494
            ||||||||||||||||||||
Sbjct: 7947 ccgtcatctgctccttgagc 7928



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>ref|XM_686252.1| PREDICTED: Danio rerio similar to solute carrier family 9 isoform 3
            regulator 2 isoform A (LOC562884), mRNA
          Length = 2649

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  tcatcaacatcagcctgaag 239
            ||||||||||||||||||||
Sbjct: 1058 tcatcaacatcagcctgaag 1077



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>ref|NM_001039503.1| Homo sapiens polyserase 3 (LOC339105), mRNA
          Length = 1662

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 360  tgcaggacgagctgcttcaggccc 383
            ||||||| ||||||||||||||||
Sbjct: 1112 tgcaggatgagctgcttcaggccc 1089



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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 479     catctgctccttgagcatca 498
               ||||||||||||||||||||
Sbjct: 2574515 catctgctccttgagcatca 2574534



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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 329     gatctcaagagtcctcagct 348
               ||||||||||||||||||||
Sbjct: 5451349 gatctcaagagtcctcagct 5451368



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>gb|AC108028.4| Homo sapiens BAC clone RP11-72E18 from 4, complete sequence
          Length = 25320

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   tctgtcgctcatgctggatt 434
             ||||||||||||||||||||
Sbjct: 14690 tctgtcgctcatgctggatt 14671



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>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence
          Length = 182230

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 360    tgcaggacgagctgcttcaggccc 383
              ||||||| ||||||||||||||||
Sbjct: 140825 tgcaggatgagctgcttcaggccc 140848



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>gb|AC079395.6| Homo sapiens BAC clone RP11-219H23 from 2, complete sequence
          Length = 82827

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 379   ggccctgcacctcgtggctg 398
             ||||||||||||||||||||
Sbjct: 52238 ggccctgcacctcgtggctg 52219



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>gb|AC087591.2| Homo sapiens chromosome 3 clone RP11-95M5 map 3p, complete sequence
          Length = 161014

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   gagtcctcagctgctcctgg 356
             ||||||||||||||||||||
Sbjct: 55145 gagtcctcagctgctcctgg 55126



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>gb|AC090957.1| Homo sapiens chromosome 3 clone RP11-708D1 map 3p, complete sequence
          Length = 151677

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    gagtcctcagctgctcctgg 356
              ||||||||||||||||||||
Sbjct: 138992 gagtcctcagctgctcctgg 138973



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>dbj|AK131087.1| Homo sapiens mRNA for FLJ00289 protein
          Length = 5491

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 360  tgcaggacgagctgcttcaggccc 383
            ||||||| ||||||||||||||||
Sbjct: 3982 tgcaggatgagctgcttcaggccc 3959



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>dbj|D26351.1|HUMHT3I Homo sapiens mRNA for type 3 inositol 1,4,5-trisphosphate receptor,
            complete cds
          Length = 8404

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  ccgtcatctgctccttgagc 494
            ||||||||||||||||||||
Sbjct: 8189 ccgtcatctgctccttgagc 8170



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>emb|AJ627035.1| Homo sapiens mRNA for polyserase-3
          Length = 1662

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 360  tgcaggacgagctgcttcaggccc 383
            ||||||| ||||||||||||||||
Sbjct: 1112 tgcaggatgagctgcttcaggccc 1089



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>gb|U01062.1|HUMIP3R3 Human type 3 inositol 1,4,5-trisphosphate receptor (ITPR3) mRNA,
            complete cds
          Length = 8833

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  ccgtcatctgctccttgagc 494
            ||||||||||||||||||||
Sbjct: 7990 ccgtcatctgctccttgagc 7971



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>dbj|AB209739.1| Homo sapiens mRNA for Inositol 1,4,5-trisphosphate receptor type 3
            variant protein
          Length = 7807

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  ccgtcatctgctccttgagc 494
            ||||||||||||||||||||
Sbjct: 6965 ccgtcatctgctccttgagc 6946



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>emb|AL832807.1|HSM804118 Homo sapiens mRNA; cDNA DKFZp667O0323 (from clone DKFZp667O0323)
          Length = 3697

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  ccgtcatctgctccttgagc 494
            ||||||||||||||||||||
Sbjct: 2819 ccgtcatctgctccttgagc 2800


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,294,834
Number of Sequences: 3902068
Number of extensions: 4294834
Number of successful extensions: 97496
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97392
Number of HSP's gapped (non-prelim): 101
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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