Clone Name | rbart34c02 |
---|---|
Clone Library Name | barley_pub |
>RAC6_ORYSA (Q6ZHA3) Rac-like GTP-binding protein 6 (OsRac6) (GTPase protein| RacB) Length = 197 Score = 35.4 bits (80), Expect = 0.089 Identities = 20/31 (64%), Positives = 20/31 (64%) Frame = -1 Query: 508 KGVFDAAIKVVLXXXXXXXXXXXQRGACSIL 416 KGVFDAAIKVVL QRGACSIL Sbjct: 167 KGVFDAAIKVVLQPPKAKKKKKAQRGACSIL 197
>KDSB_CHLCV (Q822T3) 3-deoxy-manno-octulosonate cytidylyltransferase (EC| 2.7.7.38) (CMP-KDO synthetase) (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS) Length = 254 Score = 30.0 bits (66), Expect = 3.7 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 16/96 (16%) Frame = +1 Query: 139 EIPSTKQVT*IATTCQSHEIITRQEE----EKSNKW-------IARCLDKETLLQLPVXX 285 E P + VT +A T SHEI+T Q+ +K+ K I L KET + L + Sbjct: 125 EFPEIQIVTPVAKTTDSHEILTNQKVKCVFDKNGKALYFSRSPIPHILKKETPIYLHIGV 184 Query: 286 XXXXXXXXRDDDHESAAPLKQ-----DVTII*HGGN 378 + S PL Q + I+ HGG+ Sbjct: 185 YAFRRNALFNYIESSPTPLSQAEDLEQLRILEHGGS 220
>RAC1_ARATH (Q38902) Rac-like GTP-binding protein ARAC1 (GTPase protein ROP3)| Length = 197 Score = 29.6 bits (65), Expect = 4.9 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = -1 Query: 508 KGVFDAAIKVVLXXXXXXXXXXXQRGACSIL 416 KGVFDAAI+VVL + ACSIL Sbjct: 167 KGVFDAAIRVVLQPPKQKKKKSKAQKACSIL 197
>RAC6_ARATH (Q9SBJ6) Rac-like GTP-binding protein ARAC6 (GTPase protein ROP5)| Length = 197 Score = 29.3 bits (64), Expect = 6.4 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = -1 Query: 508 KGVFDAAIKVVLXXXXXXXXXXXQRGACSIL 416 KGVFDAAI+VVL + ACSIL Sbjct: 167 KGVFDAAIRVVLQPPKQKKKKNKAQKACSIL 197
>RAC1_BETVU (Q39435) Rac-like GTP-binding protein RHO1 (RHO1Bv)| Length = 197 Score = 28.9 bits (63), Expect = 8.3 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = -1 Query: 508 KGVFDAAIKVVLXXXXXXXXXXXQRGACSIL 416 K VFDAAIKVVL + ACSIL Sbjct: 167 KAVFDAAIKVVLQPPKTKKKKSKAQKACSIL 197 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,662,292 Number of Sequences: 219361 Number of extensions: 899233 Number of successful extensions: 1784 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1775 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1784 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)