ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart34c02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ344223.2|HVU344223 Hordeum vulgare mRNA for RACB protein (RacB gene) Length = 630 Score = 260 bits (131), Expect = 4e-66 Identities = 131/131 (100%) Strand = Plus / Minus Query: 378 cttcgcccttgttctttgtctaccgattgattagatcacaagatggagcaagcccccctc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 cttcgcccttgttctttgtctaccgattgattagatcacaagatggagcaagcccccctc 571 Query: 438 tgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatca 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 tgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatca 511 Query: 498 aatacaccctt 508 ||||||||||| Sbjct: 510 aatacaccctt 500
>ref|XM_506691.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0088N06.17 mRNA Length = 1387 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Minus Query: 127 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 186 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 1280 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 1225 Query: 187 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 246 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 1224 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 1166 Query: 247 ctcgacaaagagaccttgctgcagctgcc 275 |||||||||||| |||||||||||||||| Sbjct: 1165 ctcgacaaagaggccttgctgcagctgcc 1137 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 405 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 464 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1032 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 973 Query: 465 ggtggctgcagtaccacctttattgccgcatc 496 ||||||||||| |||||||||||||||||||| Sbjct: 972 ggtggctgcagcaccacctttattgccgcatc 941 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/98 (86%), Gaps = 6/98 (6%) Strand = Plus / Minus Query: 6 ggaaacgtaattttccattgaagtgaaaataacaagcaaaaataaaataaactgagtgcg 65 |||||| ||||||||||||||||||||| ||| ||| |||| ||||||||||||||| Sbjct: 1382 ggaaacataattttccattgaagtgaaa-taagaaggaaaag---aataaactgagtgcg 1327 Query: 66 attacatcatgtctctacttatggaaccgagataacaa 103 ||||||||||| |||||||||| ||| | |||||||| Sbjct: 1326 attacatcatg--tctacttatgaaacagggataacaa 1291 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 338 cgctgaagcaagacgtaacaataatatagcatggc 372 ||||||||||||||| |||||||||| ||| |||| Sbjct: 1101 cgctgaagcaagacgcaacaataataaagcctggc 1067
>ref|XM_463909.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1105 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Minus Query: 127 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 186 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 951 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 896 Query: 187 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 246 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 895 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 837 Query: 247 ctcgacaaagagaccttgctgcagctgcc 275 |||||||||||| |||||||||||||||| Sbjct: 836 ctcgacaaagaggccttgctgcagctgcc 808 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 405 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 464 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 703 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 644 Query: 465 ggtggctgcagtaccacctttattgccgcatc 496 ||||||||||| |||||||||||||||||||| Sbjct: 643 ggtggctgcagcaccacctttattgccgcatc 612 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/98 (86%), Gaps = 6/98 (6%) Strand = Plus / Minus Query: 6 ggaaacgtaattttccattgaagtgaaaataacaagcaaaaataaaataaactgagtgcg 65 |||||| ||||||||||||||||||||| ||| ||| |||| ||||||||||||||| Sbjct: 1053 ggaaacataattttccattgaagtgaaa-taagaaggaaaag---aataaactgagtgcg 998 Query: 66 attacatcatgtctctacttatggaaccgagataacaa 103 ||||||||||| |||||||||| ||| | |||||||| Sbjct: 997 attacatcatg--tctacttatgaaacagggataacaa 962 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 338 cgctgaagcaagacgtaacaataatatagcatggc 372 ||||||||||||||| |||||||||| ||| |||| Sbjct: 772 cgctgaagcaagacgcaacaataataaagcctggc 738
>gb|AF250327.2| Oryza sativa small GTP-binding protein RACBP (RACB) mRNA, complete cds Length = 1124 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Minus Query: 127 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 186 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 1007 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 952 Query: 187 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 246 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 951 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 893 Query: 247 ctcgacaaagagaccttgctgcagctgcc 275 |||||||||||| |||||||||||||||| Sbjct: 892 ctcgacaaagaggccttgctgcagctgcc 864 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 405 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 464 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 759 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 700 Query: 465 ggtggctgcagtaccacctttattgccgcatc 496 ||||||||||| |||||||||||||||||||| Sbjct: 699 ggtggctgcagcaccacctttattgccgcatc 668 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/98 (86%), Gaps = 6/98 (6%) Strand = Plus / Minus Query: 6 ggaaacgtaattttccattgaagtgaaaataacaagcaaaaataaaataaactgagtgcg 65 |||||| ||||||||||||||||||||| ||| ||| |||| ||||||||||||||| Sbjct: 1109 ggaaacataattttccattgaagtgaaa-taagaaggaaaag---aataaactgagtgcg 1054 Query: 66 attacatcatgtctctacttatggaaccgagataacaa 103 ||||||||||| |||||||||| ||| | |||||||| Sbjct: 1053 attacatcatg--tctacttatgaaacagggataacaa 1018 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 338 cgctgaagcaagacgtaacaataatatagcatggc 372 ||||||||||||||| |||||||||| ||| |||| Sbjct: 828 cgctgaagcaagacgcaacaataataaagcctggc 794
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Plus Query: 127 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 186 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 1080667 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 1080722 Query: 187 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 246 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 1080723 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 1080781 Query: 247 ctcgacaaagagaccttgctgcagctgcc 275 |||||||||||| |||||||||||||||| Sbjct: 1080782 ctcgacaaagaggccttgctgcagctgcc 1080810 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 405 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 464 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1080915 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 1080974 Query: 465 ggtggctgcagtaccacctttattgccgcatc 496 ||||||||||| |||||||||||||||||||| Sbjct: 1080975 ggtggctgcagcaccacctttattgccgcatc 1081006 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/98 (86%), Gaps = 6/98 (6%) Strand = Plus / Plus Query: 6 ggaaacgtaattttccattgaagtgaaaataacaagcaaaaataaaataaactgagtgcg 65 |||||| ||||||||||||||||||||| ||| ||| |||| ||||||||||||||| Sbjct: 1080565 ggaaacataattttccattgaagtgaaa-taagaaggaaaag---aataaactgagtgcg 1080620 Query: 66 attacatcatgtctctacttatggaaccgagataacaa 103 ||||||||||| |||||||||| ||| | |||||||| Sbjct: 1080621 attacatcatg--tctacttatgaaacagggataacaa 1080656 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 338 cgctgaagcaagacgtaacaataatatagcatggc 372 ||||||||||||||| |||||||||| ||| |||| Sbjct: 1080846 cgctgaagcaagacgcaacaataataaagcctggc 1080880 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 tctgcgcctttttcttcttctt 457 |||||||||||||||||||||| Sbjct: 35903725 tctgcgcctttttcttcttctt 35903704
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Plus Query: 127 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 186 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 33191 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 33246 Query: 187 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 246 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 33247 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 33305 Query: 247 ctcgacaaagagaccttgctgcagctgcc 275 |||||||||||| |||||||||||||||| Sbjct: 33306 ctcgacaaagaggccttgctgcagctgcc 33334 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 405 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 464 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 33439 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 33498 Query: 465 ggtggctgcagtaccacctttattgccgcatc 496 ||||||||||| |||||||||||||||||||| Sbjct: 33499 ggtggctgcagcaccacctttattgccgcatc 33530 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/98 (86%), Gaps = 6/98 (6%) Strand = Plus / Plus Query: 6 ggaaacgtaattttccattgaagtgaaaataacaagcaaaaataaaataaactgagtgcg 65 |||||| ||||||||||||||||||||| ||| ||| |||| ||||||||||||||| Sbjct: 33089 ggaaacataattttccattgaagtgaaa-taagaaggaaaag---aataaactgagtgcg 33144 Query: 66 attacatcatgtctctacttatggaaccgagataacaa 103 ||||||||||| |||||||||| ||| | |||||||| Sbjct: 33145 attacatcatg--tctacttatgaaacagggataacaa 33180 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 338 cgctgaagcaagacgtaacaataatatagcatggc 372 ||||||||||||||| |||||||||| ||| |||| Sbjct: 33370 cgctgaagcaagacgcaacaataataaagcctggc 33404
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Plus Query: 127 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 186 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 69375 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 69430 Query: 187 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 246 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 69431 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 69489 Query: 247 ctcgacaaagagaccttgctgcagctgcc 275 |||||||||||| |||||||||||||||| Sbjct: 69490 ctcgacaaagaggccttgctgcagctgcc 69518 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 405 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 464 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 69623 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 69682 Query: 465 ggtggctgcagtaccacctttattgccgcatc 496 ||||||||||| |||||||||||||||||||| Sbjct: 69683 ggtggctgcagcaccacctttattgccgcatc 69714 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/98 (86%), Gaps = 6/98 (6%) Strand = Plus / Plus Query: 6 ggaaacgtaattttccattgaagtgaaaataacaagcaaaaataaaataaactgagtgcg 65 |||||| ||||||||||||||||||||| ||| ||| |||| ||||||||||||||| Sbjct: 69273 ggaaacataattttccattgaagtgaaa-taagaaggaaaag---aataaactgagtgcg 69328 Query: 66 attacatcatgtctctacttatggaaccgagataacaa 103 ||||||||||| |||||||||| ||| | |||||||| Sbjct: 69329 attacatcatg--tctacttatgaaacagggataacaa 69364 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 338 cgctgaagcaagacgtaacaataatatagcatggc 372 ||||||||||||||| |||||||||| ||| |||| Sbjct: 69554 cgctgaagcaagacgcaacaataataaagcctggc 69588
>dbj|AK100585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106B08, full insert sequence Length = 2977 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Minus Query: 127 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 186 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 932 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 877 Query: 187 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 246 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 876 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 818 Query: 247 ctcgacaaagagaccttgctgcagctgcc 275 |||||||||||| |||||||||||||||| Sbjct: 817 ctcgacaaagaggccttgctgcagctgcc 789 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 405 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 464 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 684 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 625 Query: 465 ggtggctgcagtaccacctttattgccgcatc 496 ||||||||||| |||||||||||||||||||| Sbjct: 624 ggtggctgcagcaccacctttattgccgcatc 593 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/98 (86%), Gaps = 6/98 (6%) Strand = Plus / Minus Query: 6 ggaaacgtaattttccattgaagtgaaaataacaagcaaaaataaaataaactgagtgcg 65 |||||| ||||||||||||||||||||| ||| ||| |||| ||||||||||||||| Sbjct: 1033 ggaaacataattttccattgaagtgaaa-taagaaggaaaag---aataaactgagtgcg 978 Query: 66 attacatcatgtctctacttatggaaccgagataacaa 103 ||||||||||| |||||||||| ||| | |||||||| Sbjct: 977 attacatcatg--tctacttatgaaacagggataacaa 942 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 338 cgctgaagcaagacgtaacaataatatagcatggc 372 ||||||||||||||| |||||||||| ||| |||| Sbjct: 753 cgctgaagcaagacgcaacaataataaagcctggc 719
>dbj|AK069443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024G13, full insert sequence Length = 1104 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Minus Query: 127 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 186 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 950 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 895 Query: 187 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 246 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 894 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 836 Query: 247 ctcgacaaagagaccttgctgcagctgcc 275 |||||||||||| |||||||||||||||| Sbjct: 835 ctcgacaaagaggccttgctgcagctgcc 807 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 405 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 464 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 702 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 643 Query: 465 ggtggctgcagtaccacctttattgccgcatc 496 ||||||||||| |||||||||||||||||||| Sbjct: 642 ggtggctgcagcaccacctttattgccgcatc 611 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/98 (86%), Gaps = 6/98 (6%) Strand = Plus / Minus Query: 6 ggaaacgtaattttccattgaagtgaaaataacaagcaaaaataaaataaactgagtgcg 65 |||||| ||||||||||||||||||||| ||| ||| |||| ||||||||||||||| Sbjct: 1052 ggaaacataattttccattgaagtgaaa-taagaaggaaaag---aataaactgagtgcg 997 Query: 66 attacatcatgtctctacttatggaaccgagataacaa 103 ||||||||||| |||||||||| ||| | |||||||| Sbjct: 996 attacatcatg--tctacttatgaaacagggataacaa 961 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 338 cgctgaagcaagacgtaacaataatatagcatggc 372 ||||||||||||||| |||||||||| ||| |||| Sbjct: 771 cgctgaagcaagacgcaacaataataaagcctggc 737
>dbj|AK100842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123F22, full insert sequence Length = 1386 Score = 139 bits (70), Expect = 1e-29 Identities = 108/118 (91%), Gaps = 2/118 (1%) Strand = Plus / Minus Query: 158 aagttacctaaattgccacgacttgtcagtcacacgagataatcacaaggcaggaagaag 217 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 1251 aagttacctaa-ttgccacgacttgtcagtcacacgagataatcacaaggcagaaaggag 1193 Query: 218 agaaatcaaacaaatggatcgcccgatgcctcgacaaagagaccttgctgcagctgcc 275 | |||| ||||||| ||||||| | ||||||||||||||| |||||||||||||||| Sbjct: 1192 a-aaatgaaacaaacggatcgctcattgcctcgacaaagaggccttgctgcagctgcc 1136 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 405 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 464 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1031 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 972 Query: 465 ggtggctgcagtaccacctttattgccgcatc 496 ||||||||||| |||||||||||||||||||| Sbjct: 971 ggtggctgcagcaccacctttattgccgcatc 940 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/98 (86%), Gaps = 6/98 (6%) Strand = Plus / Minus Query: 6 ggaaacgtaattttccattgaagtgaaaataacaagcaaaaataaaataaactgagtgcg 65 |||||| ||||||||||||||||||||| ||| ||| |||| ||||||||||||||| Sbjct: 1381 ggaaacataattttccattgaagtgaaa-taagaaggaaaag---aataaactgagtgcg 1326 Query: 66 attacatcatgtctctacttatggaaccgagataacaa 103 ||||||||||| |||||||||| ||| | |||||||| Sbjct: 1325 attacatcatg--tctacttatgaaacagggataacaa 1290 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 338 cgctgaagcaagacgtaacaataatatagcatggc 372 ||||||||||||||| |||||||||| ||| |||| Sbjct: 1100 cgctgaagcaagacgcaacaataataaagcctggc 1066
>gb|AY106325.1| Zea mays PCO091374 mRNA sequence Length = 1451 Score = 129 bits (65), Expect = 1e-26 Identities = 121/137 (88%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 373 ggcaacttcgcccttgtt-ctttgtctaccgattgattagatcacaagatggagcaagcc 431 |||| ||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||| Sbjct: 1084 ggcaccttcgcccttgtttcttcatctaccgat-gattagatcacaaaatggagcacgcc 1026 Query: 432 cccctctgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttattgcc 491 ||||||||| |||||||||||||||| ||||| || |||||||| || |||||||| ||| Sbjct: 1025 cccctctgcacctttttcttcttcttcgccttaggcggctgcagcacaacctttatcgcc 966 Query: 492 gcatcaaatacaccctt 508 ||||| || |||||||| Sbjct: 965 gcatcgaagacaccctt 949 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 188 cacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgcc 247 ||||| ||||||||||||||||||||| || |||| ||||||| ||||| | ||||| Sbjct: 1253 cacaccagataatcacaaggcaggaaggaggaaaatgaaacaaacatatcgctcaatgcc 1194 Query: 248 tcgacaaagaga 259 |||||||||||| Sbjct: 1193 tcgacaaagaga 1182 Score = 60.0 bits (30), Expect = 7e-06 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 49 aaaataaactgagtgcgattacatcatgtctctacttatggaaccgagataaca 102 |||||||||| ||| |||||||||||||||| ||||||||||| ||||||||| Sbjct: 1391 aaaataaacttagtacgattacatcatgtct-aacttatggaacagagataaca 1339 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 ctcaaacacgggaaataccgtcta 151 ||||||||||||||||||| |||| Sbjct: 1322 ctcaaacacgggaaataccttcta 1299
>gb|AY163378.1| Zea mays putative ROP family GTPase ROP9 gene, complete cds Length = 3625 Score = 123 bits (62), Expect = 6e-25 Identities = 122/140 (87%), Gaps = 4/140 (2%) Strand = Plus / Minus Query: 373 ggcaacttcgcccttgtt--ctttgtctaccgat--tgattagatcacaagatggagcaa 428 |||| ||||||||||||| ||||||||| ||| | |||||||||||| |||||||| Sbjct: 3261 ggcaccttcgcccttgtttcttttgtctactgatcattattagatcacaaaatggagcac 3202 Query: 429 gcccccctctgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttatt 488 ||||||||||||||||||||||||||||| ||||| || |||||||| || |||||||| Sbjct: 3201 gcccccctctgcgcctttttcttcttcttcgccttaggcggctgcagcacaacctttatc 3142 Query: 489 gccgcatcaaatacaccctt 508 |||||||| || |||||||| Sbjct: 3141 gccgcatcgaagacaccctt 3122 Score = 63.9 bits (32), Expect = 5e-07 Identities = 73/85 (85%), Gaps = 5/85 (5%) Strand = Plus / Minus Query: 152 ctaagcaagttacctaaattgccacgactt-gtcagtcacacg----agataatcacaag 206 |||||| ||||||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 3463 ctaagcgagttacctaaattgccacgacctcgtcagtcacacacaccagataatcacaag 3404 Query: 207 gcaggaagaagagaaatcaaacaaa 231 || ||||| || ||||| ||||||| Sbjct: 3403 gcgggaaggagggaaatgaaacaaa 3379 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/36 (91%), Gaps = 2/36 (5%) Strand = Plus / Minus Query: 64 cgattacatcatgtctctacttatggaaccgagata 99 |||||||||||||||| ||||||||||| |||||| Sbjct: 3556 cgattacatcatgtct--acttatggaacagagata 3523
>gb|AY163377.1| Zea mays putative ROP family GTPase ROP9 mRNA, complete cds Length = 1136 Score = 123 bits (62), Expect = 6e-25 Identities = 122/140 (87%), Gaps = 4/140 (2%) Strand = Plus / Minus Query: 373 ggcaacttcgcccttgtt--ctttgtctaccgat--tgattagatcacaagatggagcaa 428 |||| ||||||||||||| ||||||||| ||| | |||||||||||| |||||||| Sbjct: 772 ggcaccttcgcccttgtttcttttgtctactgatcattattagatcacaaaatggagcac 713 Query: 429 gcccccctctgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttatt 488 ||||||||||||||||||||||||||||| ||||| || |||||||| || |||||||| Sbjct: 712 gcccccctctgcgcctttttcttcttcttcgccttaggcggctgcagcacaacctttatc 653 Query: 489 gccgcatcaaatacaccctt 508 |||||||| || |||||||| Sbjct: 652 gccgcatcgaagacaccctt 633 Score = 63.9 bits (32), Expect = 5e-07 Identities = 73/85 (85%), Gaps = 5/85 (5%) Strand = Plus / Minus Query: 152 ctaagcaagttacctaaattgccacgactt-gtcagtcacacg----agataatcacaag 206 |||||| ||||||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 974 ctaagcgagttacctaaattgccacgacctcgtcagtcacacacaccagataatcacaag 915 Query: 207 gcaggaagaagagaaatcaaacaaa 231 || ||||| || ||||| ||||||| Sbjct: 914 gcgggaaggagggaaatgaaacaaa 890 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/36 (91%), Gaps = 2/36 (5%) Strand = Plus / Minus Query: 64 cgattacatcatgtctctacttatggaaccgagata 99 |||||||||||||||| ||||||||||| |||||| Sbjct: 1067 cgattacatcatgtct--acttatggaacagagata 1034
>gb|BT016448.1| Zea mays clone Contig281 mRNA sequence Length = 873 Score = 121 bits (61), Expect = 2e-24 Identities = 111/125 (88%), Gaps = 2/125 (1%) Strand = Plus / Plus Query: 373 ggcaacttcgcccttgtt-ctttgtctaccgattgattagatcacaagatggagcaagcc 431 |||| ||||||||||||| ||| |||||||||| ||||||||||||| |||||||| ||| Sbjct: 372 ggcaccttcgcccttgtttcttcgtctaccgat-gattagatcacaaaatggagcacgcc 430 Query: 432 cccctctgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttattgcc 491 ||||||||| |||||||||||||||| ||||| || |||||||| || |||||||| || Sbjct: 431 cccctctgcacctttttcttcttcttcgccttaggcggctgcagcacaacctttatcgct 490 Query: 492 gcatc 496 ||||| Sbjct: 491 gcatc 495 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 188 cacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgcc 247 ||||| ||||||||||||||||||||| || |||| ||||||| ||||| ||||| Sbjct: 203 cacaccagataatcacaaggcaggaaggaggaaaatgaaacaaacatatcgcttaatgcc 262 Query: 248 tcgacaaagaga 259 |||||||||||| Sbjct: 263 tcgacaaagaga 274 Score = 52.0 bits (26), Expect = 0.002 Identities = 48/54 (88%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 49 aaaataaactgagtgcgattacatcatgtctctacttatggaaccgagataaca 102 |||||||||| ||| |||| ||||||||||| ||||||||||| ||||||||| Sbjct: 61 aaaataaacttagtacgataacatcatgtct-aacttatggaacagagataaca 113 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 ctcaaacacgggaaataccgtcta 151 ||||||||||||||||||| |||| Sbjct: 130 ctcaaacacgggaaataccttcta 153
>gb|AY163379.2| Zea mays putative ROP family GTPase ROP2 gene, complete cds Length = 3761 Score = 121 bits (61), Expect = 2e-24 Identities = 111/125 (88%), Gaps = 2/125 (1%) Strand = Plus / Minus Query: 373 ggcaacttcgcccttgtt-ctttgtctaccgattgattagatcacaagatggagcaagcc 431 |||| ||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||| Sbjct: 3415 ggcaccttcgcccttgtttcttcatctaccgat-gattagatcacaaaatggagcacgcc 3357 Query: 432 cccctctgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttattgcc 491 ||||||||| |||||||||||||||| ||||| || |||||||| || |||||||| ||| Sbjct: 3356 cccctctgcacctttttcttcttcttcgccttaggcggctgcagcacaacctttatcgcc 3297 Query: 492 gcatc 496 ||||| Sbjct: 3296 gcatc 3292 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 188 cacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgcc 247 ||||| ||||||||||||||||||||| || |||| ||||||| ||||| | ||||| Sbjct: 3584 cacaccagataatcacaaggcaggaaggaggaaaatgaaacaaacatatcgctcaatgcc 3525 Query: 248 tcgacaaagaga 259 |||||||||||| Sbjct: 3524 tcgacaaagaga 3513 Score = 60.0 bits (30), Expect = 7e-06 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 49 aaaataaactgagtgcgattacatcatgtctctacttatggaaccgagataaca 102 |||||||||| ||| |||||||||||||||| ||||||||||| ||||||||| Sbjct: 3722 aaaataaacttagtacgattacatcatgtct-aacttatggaacagagataaca 3670 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 ctcaaacacgggaaataccgtcta 151 ||||||||||||||||||| |||| Sbjct: 3653 ctcaaacacgggaaataccttcta 3630
>gb|AF126053.2| Zea mays Rop2 small GTP binding protein mRNA, complete cds Length = 1353 Score = 121 bits (61), Expect = 2e-24 Identities = 111/125 (88%), Gaps = 2/125 (1%) Strand = Plus / Minus Query: 373 ggcaacttcgcccttgtt-ctttgtctaccgattgattagatcacaagatggagcaagcc 431 |||| ||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||| Sbjct: 991 ggcaccttcgcccttgtttcttcatctaccgat-gattagatcacaaaatggagcacgcc 933 Query: 432 cccctctgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttattgcc 491 ||||||||| |||||||||||||||| ||||| || |||||||| || |||||||| ||| Sbjct: 932 cccctctgcacctttttcttcttcttcgccttaggcggctgcagcacaacctttatcgcc 873 Query: 492 gcatc 496 ||||| Sbjct: 872 gcatc 868 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 188 cacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgcc 247 ||||| ||||||||||||||||||||| || |||| ||||||| ||||| | ||||| Sbjct: 1160 cacaccagataatcacaaggcaggaaggaggaaaatgaaacaaacatatcgctcaatgcc 1101 Query: 248 tcgacaaagaga 259 |||||||||||| Sbjct: 1100 tcgacaaagaga 1089 Score = 60.0 bits (30), Expect = 7e-06 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 49 aaaataaactgagtgcgattacatcatgtctctacttatggaaccgagataaca 102 |||||||||| ||| |||||||||||||||| ||||||||||| ||||||||| Sbjct: 1298 aaaataaacttagtacgattacatcatgtct-aacttatggaacagagataaca 1246 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 ctcaaacacgggaaataccgtcta 151 ||||||||||||||||||| |||| Sbjct: 1229 ctcaaacacgggaaataccttcta 1206
>gb|AY579208.1| Oryza sativa small GTP-binding protein RacB (RacB) gene, complete cds Length = 2930 Score = 119 bits (60), Expect = 9e-24 Identities = 78/84 (92%) Strand = Plus / Minus Query: 413 tcacaagatggagcaagcccccctctgcgcctttttcttcttctttgcctttggtggctg 472 |||||| |||||||| |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 2930 tcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttgggtggctg 2871 Query: 473 cagtaccacctttattgccgcatc 496 ||| |||||||||||||||||||| Sbjct: 2870 cagcaccacctttattgccgcatc 2847
>gb|AF233447.1|AF233447 Physcomitrella patens rac 4 protein (rac4) mRNA, partial cds Length = 1081 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 443 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 ||||||||||||||| | |||||| ||||| || ||||||||||| || |||||||| Sbjct: 523 ctttttcttcttcttcggctttgggggctgaagaaccacctttatggcggcatcaaa 467
>ref|NM_101863.2| Arabidopsis thaliana ROP2; GTP binding AT1G20090 (ROP2) mRNA, complete cds Length = 1188 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 443 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 831 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 775
>gb|AF332438.1| Arabidopsis thaliana putative RAC GTP-binding protein ARAC4 (At1g20090) mRNA, complete cds Length = 588 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 443 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 561 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 505
>gb|AY056308.1| Arabidopsis thaliana putative RAC GTP-binding protein ARAC4 (At1g20090) mRNA, complete cds Length = 619 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 443 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 561 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 505
>gb|AF360154.1| Arabidopsis thaliana putative RAC GTP-binding protein ARAC4 (At1g20090) mRNA, complete cds Length = 1226 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 443 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 831 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 775
>emb|BX813673.1|CNS0AC3D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB31ZH02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1057 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 443 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 714 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 658
>gb|AF115471.1|AF115471 Arabidopsis thaliana cultivar Landsberg erecta Arac4 (Arac4) gene, complete cds Length = 1794 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 443 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 1556 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 1500
>gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis thaliana chromosome 1, complete sequence Length = 92710 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 443 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 43360 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 43416
>gb|U49972.1|ATU49972 Arabidopsis thaliana GTP binding protein Rop2At (Rop2At) mRNA, complete cds Length = 935 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 443 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 626 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 570
>gb|U45236.1|ATU45236 Arabidopsis thaliana rac-like protein (ARAC4) mRNA, complete cds Length = 1160 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 443 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 820 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 764
>gb|AY870928.1| Physcomitrella patens small rho-1 GTP-binding protein (Rac-1) gene, complete cds Length = 4922 Score = 48.1 bits (24), Expect = 0.028 Identities = 48/56 (85%) Strand = Plus / Minus Query: 444 tttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 |||||||||||||| ||| |||||||| || |||||||| ||||| |||||||| Sbjct: 3972 tttttcttcttcttctgcttgggtggctgaagaaccaccttgattgctgcatcaaa 3917
>gb|AF115469.1|AF115469 Arabidopsis thaliana cultivar Landsberg erecta Arac2 (Arac2) gene, complete cds Length = 2091 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 448 tcttcttctttgcctttggtggc 470 ||||||||||||||||||||||| Sbjct: 1759 tcttcttctttgcctttggtggc 1737
>gb|AE008680.1| Rickettsia conorii str. Malish 7, section 112 of 114 of the complete genome Length = 10615 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 aaataacaagcaaaaataaaat 53 |||||||||||||||||||||| Sbjct: 9897 aaataacaagcaaaaataaaat 9876
>gb|BT012810.1| Lycopersicon esculentum clone 113830F, mRNA sequence Length = 1158 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 447 ttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaatacaccc 506 |||||||||||| ||| ||||| || || |||||||| || ||||||||||| ||| || Sbjct: 753 ttcttcttcttttgcttgggtggttgtaggaccaccttaatggccgcatcaaaaacagcc 694 Query: 507 tt 508 || Sbjct: 693 tt 692
>gb|U28929.1| Caenorhabditis elegans cosmid F09C12, complete sequence Length = 25662 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 31 aaaataacaagcaaaaataaaataaa 56 ||||||| |||||||||||||||||| Sbjct: 9324 aaaataaaaagcaaaaataaaataaa 9299
>emb|BX571708.4| Zebrafish DNA sequence from clone DKEYP-74B2, complete sequence Length = 193197 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 taacaagcaaaaataaaataaa 56 |||||||||||||||||||||| Sbjct: 13916 taacaagcaaaaataaaataaa 13937
>gb|AF329814.1|AF329814 Oryza sativa subsp. japonica small GTP binding protein RACDP (RACD) gene, complete cds Length = 4327 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 tctgcgcctttttcttcttctt 457 |||||||||||||||||||||| Sbjct: 4272 tctgcgcctttttcttcttctt 4251
>emb|BX537274.3| Zebrafish DNA sequence from clone DKEY-103L3 in linkage group 13, complete sequence Length = 151298 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 taacaagcaaaaataaaataaa 56 |||||||||||||||||||||| Sbjct: 74322 taacaagcaaaaataaaataaa 74301
>dbj|AP006187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0264G11 Length = 55919 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 tctgcgcctttttcttcttctt 457 |||||||||||||||||||||| Sbjct: 9894 tctgcgcctttttcttcttctt 9873
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_E10 Length = 107284 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 tctgcgcctttttcttcttctt 457 |||||||||||||||||||||| Sbjct: 94271 tctgcgcctttttcttcttctt 94250
>gb|AF218381.1|AF218381 Oryza sativa subsp. japonica small GTP binding protein RACDP (RACD) mRNA, complete cds Length = 850 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 tctgcgcctttttcttcttctt 457 |||||||||||||||||||||| Sbjct: 685 tctgcgcctttttcttcttctt 664
>dbj|AK067796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116I24, full insert sequence Length = 1103 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 tctgcgcctttttcttcttctt 457 |||||||||||||||||||||| Sbjct: 661 tctgcgcctttttcttcttctt 640
>dbj|AK067504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108N17, full insert sequence Length = 957 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 tctgcgcctttttcttcttctt 457 |||||||||||||||||||||| Sbjct: 702 tctgcgcctttttcttcttctt 681
>gb|AY883090.1| Vigna radiata small GTP-binding protein ROP1 mRNA, complete cds Length = 916 Score = 44.1 bits (22), Expect = 0.44 Identities = 43/50 (86%) Strand = Plus / Minus Query: 450 ttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 |||||||||| |||||||||| || | | ||||||||||| |||||||| Sbjct: 678 ttcttctttggctttggtggcctcaatgcgacctttattgcagcatcaaa 629
>dbj|AB036062.1| Oryza sativa (japonica cultivar-group) osRACD mRNA for small GTP binding protein, partial cds Length = 290 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 tctgcgcctttttcttcttctt 457 |||||||||||||||||||||| Sbjct: 115 tctgcgcctttttcttcttctt 94
>gb|AC126539.9| Mus musculus chromosome 8, clone RP24-112G5, complete sequence Length = 158710 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 aacaagcaaaaataaaataaa 56 ||||||||||||||||||||| Sbjct: 61499 aacaagcaaaaataaaataaa 61479
>gb|AE017133.1| Yersinia pestis biovar Medievalis str. 91001 section 7 of 16 of the complete genome Length = 290874 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 aaaataacaagcaaaaataaa 51 ||||||||||||||||||||| Sbjct: 150139 aaaataacaagcaaaaataaa 150119
>gb|AF360108.1| Penaeus (Litopenaeus) vannamei microsatellite TUMXLv9.28 sequence Length = 345 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 tttttcttcttctttgccttt 464 ||||||||||||||||||||| Sbjct: 219 tttttcttcttctttgccttt 239
>gb|AC147040.3| Pan troglodytes BAC clone RP43-121E14 from 7, complete sequence Length = 142854 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aacaagcaaaaataaaataaa 56 ||||||||||||||||||||| Sbjct: 38062 aacaagcaaaaataaaataaa 38082
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 aaaataacaagcaaaaataaa 51 ||||||||||||||||||||| Sbjct: 2581759 aaaataacaagcaaaaataaa 2581779
>gb|AC116106.18| Mus musculus chromosome 16, clone RP23-23D5, complete sequence Length = 252718 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 aaaataacaagcaaaaataaaataa 55 ||||| ||||||||||||||||||| Sbjct: 170595 aaaattacaagcaaaaataaaataa 170619
>ref|XM_755043.1| Ustilago maydis 521 hypothetical protein (UM03989.1) partial mRNA Length = 1863 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 433 ccctctgcgcctttttcttcttctt 457 ||||||||||||| ||||||||||| Sbjct: 763 ccctctgcgccttcttcttcttctt 739
>ref|XM_747906.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g16330) partial mRNA Length = 2367 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cgcctttttcttcttctttgc 460 ||||||||||||||||||||| Sbjct: 618 cgcctttttcttcttctttgc 598
>gb|AF126055.1| Zea mays Rop4 small GTP binding protein mRNA, complete cds Length = 1058 Score = 42.1 bits (21), Expect = 1.7 Identities = 42/49 (85%) Strand = Plus / Minus Query: 451 tcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 |||||||| |||||||||||| || |||||||| ||||| || ||||| Sbjct: 731 tcttcttttgctttggtggctggagaaccaccttaattgctgcgtcaaa 683
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 aataacaagcaaaaataaaat 53 ||||||||||||||||||||| Sbjct: 1462893 aataacaagcaaaaataaaat 1462873
>emb|CR387996.13| Zebrafish DNA sequence from clone DKEY-183N6 in linkage group 3, complete sequence Length = 210145 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 aaataacaagcaaaaataaaataaa 56 |||| |||||||||||||||||||| Sbjct: 171077 aaattacaagcaaaaataaaataaa 171053
>gb|AC137994.19| Medicago truncatula clone mth2-23f15, complete sequence Length = 131563 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 23 ttgaagtgaaaataacaagcaaaaa 47 |||||||||||||||| |||||||| Sbjct: 108369 ttgaagtgaaaataactagcaaaaa 108393
>emb|AL158070.11| Human DNA sequence from clone RP11-235C23 on chromosome 9q31.1-31.3 Contains part of a pseudogene similar to KIAA1272, KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2 proteins, the 3' end of the CSDUFD1 gene for cystatin and DUF19 domain containing 1, a novel gene, the FCMD gene for Fukuyama type congenital muscular dystrophy protein, the TAL2 gene for T-cell acute lymphocytic leukemia 2 protein and two CpG islands, complete sequence Length = 167005 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 aaataacaagcaaaaataaaataaa 56 |||||||||| |||||||||||||| Sbjct: 148431 aaataacaagtaaaaataaaataaa 148407
>emb|AL137851.12| Human DNA sequence from clone RP11-6H18 on chromosome 9p23-24.3 Contains a novel gene and part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 139182 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 ccattgaagtgaaaataacaa 40 ||||||||||||||||||||| Sbjct: 114208 ccattgaagtgaaaataacaa 114188
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 aaaataacaagcaaaaataaa 51 ||||||||||||||||||||| Sbjct: 2313495 aaaataacaagcaaaaataaa 2313475
>emb|AL031866.1|YP102KB Yersinia pestis 102 kbases unstable region: from 1 to 119443 Length = 119443 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 aaaataacaagcaaaaataaa 51 ||||||||||||||||||||| Sbjct: 14448 aaaataacaagcaaaaataaa 14468
>emb|AJ414150.1| Yersinia pestis strain CO92 complete genome; segment 10/20 Length = 335050 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 aaaataacaagcaaaaataaa 51 ||||||||||||||||||||| Sbjct: 304039 aaaataacaagcaaaaataaa 304019
>gb|AC079264.23| Homo sapiens Xp BAC RP11-315B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194851 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 caggaagaagagaaatcaaac 228 ||||||||||||||||||||| Sbjct: 23301 caggaagaagagaaatcaaac 23281
>gb|AC158916.4| Mus musculus chromosome 8, clone RP23-18G2, complete sequence Length = 206384 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 aacaagcaaaaataaaataaa 56 ||||||||||||||||||||| Sbjct: 3320 aacaagcaaaaataaaataaa 3300
>emb|BX510912.4| Zebrafish DNA sequence from clone CH211-18J22 in linkage group 3, complete sequence Length = 189210 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 aaaataacaagcaaaaataaa 51 ||||||||||||||||||||| Sbjct: 187935 aaaataacaagcaaaaataaa 187955
>gb|BC045984.1| Danio rerio RIO kinase 1 (yeast), mRNA (cDNA clone MGC:56195 IMAGE:5413872), complete cds Length = 1884 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 tgaaaataacaagcaaaaataaaat 53 ||||||||||||||||||| ||||| Sbjct: 190 tgaaaataacaagcaaaaagaaaat 214
>emb|BX005341.6| Zebrafish DNA sequence from clone DKEY-209J17 in linkage group 16, complete sequence Length = 158356 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 aaaataaaataaactgagtgc 64 ||||||||||||||||||||| Sbjct: 112300 aaaataaaataaactgagtgc 112280
>gb|AC022497.18| Homo sapiens 3 BAC RP11-80P20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147816 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aacaagcaaaaataaaataaa 56 ||||||||||||||||||||| Sbjct: 144820 aacaagcaaaaataaaataaa 144840
>gb|AY108669.1| Zea mays PCO105291 mRNA sequence Length = 1119 Score = 42.1 bits (21), Expect = 1.7 Identities = 42/49 (85%) Strand = Plus / Minus Query: 451 tcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 499 |||||||| |||||||||||| || |||||||| ||||| || ||||| Sbjct: 768 tcttcttttgctttggtggctggagaaccaccttaattgctgcgtcaaa 720
>gb|AC161811.6| Mus musculus chromosome 5, clone RP23-456E9, complete sequence Length = 163565 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 aagcaaaaataaaataaactg 59 ||||||||||||||||||||| Sbjct: 101088 aagcaaaaataaaataaactg 101068
>emb|BX004789.7| Mouse DNA sequence from clone RP24-132K7 on chromosome 4, complete sequence Length = 79922 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 ggaagaagagaaatcaaacaaatgg 234 |||||||||||||| |||||||||| Sbjct: 52595 ggaagaagagaaattaaacaaatgg 52571
>gb|CP000218.1| Drosophila melanogaster genomic scaffold 211000022280780 Length = 166742 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 gacgaccatgagagtgcagct 336 ||||||||||||||||||||| Sbjct: 11085 gacgaccatgagagtgcagct 11105
>gb|AC138365.16| Mus musculus chromosome 5, clone RP23-262B5, complete sequence Length = 172631 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 aagcaaaaataaaataaactg 59 ||||||||||||||||||||| Sbjct: 27354 aagcaaaaataaaataaactg 27374
>dbj|AP006144.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT23P21, TM0261, complete sequence Length = 121882 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 cttcttctttgcctttggtgg 469 ||||||||||||||||||||| Sbjct: 67552 cttcttctttgcctttggtgg 67572
>ref|NM_212995.1| Danio rerio RIO kinase 1 (yeast) (riok1), mRNA Length = 1884 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 tgaaaataacaagcaaaaataaaat 53 ||||||||||||||||||| ||||| Sbjct: 190 tgaaaataacaagcaaaaagaaaat 214
>gb|AC166646.4| Mus musculus chromosome 3, clone RP24-400P18, complete sequence Length = 176864 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 ttttcttcttctttgccttt 464 |||||||||||||||||||| Sbjct: 101314 ttttcttcttctttgccttt 101333
>gb|AF452884.3| Beet black scorch virus, complete genome Length = 3644 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ttggtggctgcagtaccacc 482 |||||||||||||||||||| Sbjct: 3278 ttggtggctgcagtaccacc 3259
>gb|AY626780.1| Beet black scorch virus, complete genome Length = 3644 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ttggtggctgcagtaccacc 482 |||||||||||||||||||| Sbjct: 3278 ttggtggctgcagtaccacc 3259
>ref|XM_455350.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F05962g predicted mRNA Length = 804 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 attgccgcatcaaatacacc 505 |||||||||||||||||||| Sbjct: 341 attgccgcatcaaatacacc 322
>gb|AC162872.9| Mus musculus chromosome 3, clone RP24-346J6, complete sequence Length = 147221 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 ttttcttcttctttgccttt 464 |||||||||||||||||||| Sbjct: 96822 ttttcttcttctttgccttt 96803
>gb|AC117630.11| Mus musculus chromosome 9, clone RP23-181A16, complete sequence Length = 245165 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cacaaggcaggaagaagaga 220 |||||||||||||||||||| Sbjct: 125878 cacaaggcaggaagaagaga 125859
>ref|XM_849238.1| PREDICTED: Canis familiaris hypothetical protein LOC611555 (LOC611555), mRNA Length = 810 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ctttttcttcttctttgcct 462 |||||||||||||||||||| Sbjct: 582 ctttttcttcttctttgcct 563
>gb|AC145433.2| Pan troglodytes BAC clone RP43-43I4 from 7, complete sequence Length = 179409 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 acaagcaaaaataaaataaa 56 |||||||||||||||||||| Sbjct: 66480 acaagcaaaaataaaataaa 66461
>emb|BX927253.9| Zebrafish DNA sequence from clone DKEY-29J8 in linkage group 21, complete sequence Length = 204347 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 54162 gaagagaaatcaaacaaatg 54181
>emb|CR388042.8| Zebrafish DNA sequence from clone CH211-254C12 in linkage group 15, complete sequence Length = 158539 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 32251 gaagagaaatcaaacaaatg 32270
>emb|CR925784.13| Zebrafish DNA sequence from clone DKEYP-104A3 in linkage group 11, complete sequence Length = 174101 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 aaaaataaaataaactgagt 62 |||||||||||||||||||| Sbjct: 92875 aaaaataaaataaactgagt 92894
>emb|CR376778.9| Zebrafish DNA sequence from clone DKEYP-94F12 in linkage group 25, complete sequence Length = 185814 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 35790 gaagagaaatcaaacaaatg 35771
>emb|CR954189.2| Medicago truncatula chromosome 5 clone mte1-73d17, COMPLETE SEQUENCE Length = 110556 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gtgaaaataacaagcaaaaa 47 |||||||||||||||||||| Sbjct: 104042 gtgaaaataacaagcaaaaa 104023
>emb|BX927164.19| Zebrafish DNA sequence from clone DKEY-27P2 in linkage group 5, complete sequence Length = 108759 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 70592 gaagagaaatcaaacaaatg 70611
>gb|AC134535.4| Mus musculus BAC clone RP24-371E20 from chromosome 7, complete sequence Length = 214571 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 tttttcttcttctttgcctt 463 |||||||||||||||||||| Sbjct: 47840 tttttcttcttctttgcctt 47859
>gb|AC132411.3| Mus musculus BAC clone RP23-352O24 from chromosome 1, complete sequence Length = 181902 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 30 gaaaataacaagcaaaaataaaataaac 57 ||||| || ||||||||||||||||||| Sbjct: 99287 gaaaaaaataagcaaaaataaaataaac 99260
>gb|AC004158.1|HUAC004158 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-10F4, complete sequence Length = 180551 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaaataacaagcaaaaataa 50 |||||||||||||||||||| Sbjct: 64300 aaaataacaagcaaaaataa 64319
>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence Length = 232817 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ctttttcttcttctttgcct 462 |||||||||||||||||||| Sbjct: 78772 ctttttcttcttctttgcct 78791
>gb|AC073486.5| Homo sapiens BAC clone RP11-807H17 from 7, complete sequence Length = 162911 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 acaagcaaaaataaaataaa 56 |||||||||||||||||||| Sbjct: 122982 acaagcaaaaataaaataaa 123001
>gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188300 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 aaaataacaagcaaaaataaaata 54 ||||||||||||||| |||||||| Sbjct: 129498 aaaataacaagcaaacataaaata 129521
>gb|AC142317.1| Pan troglodytes BAC clone RP43-52L16 from 7, complete sequence Length = 147345 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 acaagcaaaaataaaataaa 56 |||||||||||||||||||| Sbjct: 119327 acaagcaaaaataaaataaa 119346
>gb|AC134049.24| Medicago truncatula clone mth2-21j3, complete sequence Length = 124857 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gtgaaaataacaagcaaaaa 47 |||||||||||||||||||| Sbjct: 103543 gtgaaaataacaagcaaaaa 103562
>gb|AC148227.14| Medicago truncatula clone mth2-8f11, complete sequence Length = 116139 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 aataacaagcaaaaataaaa 52 |||||||||||||||||||| Sbjct: 39295 aataacaagcaaaaataaaa 39314
>emb|BX957234.7| Zebrafish DNA sequence from clone CH211-286L10 in linkage group 23, complete sequence Length = 180834 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 149503 gaagagaaatcaaacaaatg 149522
>emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chromosome 1 Contains the 3' end of the KCNN3 gene for potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, a novel gene and the 5' end of the ADAR gene for adenosine deaminase, RNA-specific, complete sequence Length = 173014 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 ttcttcttctttgcctttgg 466 |||||||||||||||||||| Sbjct: 169386 ttcttcttctttgcctttgg 169367
>ref|XM_775531.1| PREDICTED: Strongylocentrotus purpuratus similar to CTF18, chromosome transmission fidelity factor 18 homolog (LOC575115), mRNA Length = 3012 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 tcttcttctttgcctttggt 467 |||||||||||||||||||| Sbjct: 1864 tcttcttctttgcctttggt 1845
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 attgccgcatcaaatacacc 505 |||||||||||||||||||| Sbjct: 572236 attgccgcatcaaatacacc 572217
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaataaaataaactgagtgc 64 |||||||||||||||||||| Sbjct: 1181476 aaataaaataaactgagtgc 1181457
>emb|BX936382.9| Zebrafish DNA sequence from clone CH211-223A21 in linkage group 3, complete sequence Length = 162342 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 90023 gaagagaaatcaaacaaatg 90004
>gb|AC115088.6| Homo sapiens chromosome 11, clone RP11-792G9, complete sequence Length = 200274 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 taacaagcaaaaataaaata 54 |||||||||||||||||||| Sbjct: 130892 taacaagcaaaaataaaata 130873
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence Length = 796348 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcaaaaataaaataaactga 60 |||||||||||||||||||| Sbjct: 609601 gcaaaaataaaataaactga 609620
>emb|BX927404.7| Zebrafish DNA sequence from clone DKEY-18F7 in linkage group 19, complete sequence Length = 94279 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 85223 gaagagaaatcaaacaaatg 85242
>emb|BX663613.13| Zebrafish DNA sequence from clone DKEY-74H3 in linkage group 14, complete sequence Length = 148362 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 22736 gaagagaaatcaaacaaatg 22717
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaataaaataaactgagtgc 64 |||||||||||||||||||| Sbjct: 1229357 aaataaaataaactgagtgc 1229338
>gb|AC018452.11| Homo sapiens chromosome 3 BAC RP11-23D24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171523 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 aaaataacaagcaaaaataaaata 54 |||||| ||||||||||||||||| Sbjct: 139401 aaaatagcaagcaaaaataaaata 139378
>gb|AC027137.8| Staphylococcus aureus clone sabac-123, complete sequence Length = 49643 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 aaataaaataaactgagtgc 64 |||||||||||||||||||| Sbjct: 35416 aaataaaataaactgagtgc 35435
>gb|AC025775.6| Homo sapiens chromosome 5 clone CTD-2299B9, complete sequence Length = 95782 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aacaagcaaaaataaaataa 55 |||||||||||||||||||| Sbjct: 17985 aacaagcaaaaataaaataa 17966
>gb|AC011927.11| Homo sapiens chromosome 15, clone RP11-15O14, complete sequence Length = 162662 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 ccttgctgcagctgccggtgggta 283 |||| ||||||||||||||||||| Sbjct: 145089 ccttcctgcagctgccggtgggta 145066
>gb|AC032011.15| Homo sapiens chromosome 15, clone RP11-435J9, complete sequence Length = 201200 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 ccttgctgcagctgccggtgggta 283 |||| ||||||||||||||||||| Sbjct: 18919 ccttcctgcagctgccggtgggta 18896
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaataaaataaactgagtgc 64 |||||||||||||||||||| Sbjct: 1192615 aaataaaataaactgagtgc 1192596
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaataaaataaactgagtgc 64 |||||||||||||||||||| Sbjct: 1088841 aaataaaataaactgagtgc 1088822
>emb|BX649307.12| Zebrafish DNA sequence from clone CH211-209P16 in linkage group 4, complete sequence Length = 164976 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 34097 gaagagaaatcaaacaaatg 34116
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaataaaataaactgagtgc 64 |||||||||||||||||||| Sbjct: 1168796 aaataaaataaactgagtgc 1168777
>emb|AL844603.5| Mouse DNA sequence from clone RP24-334I20 on chromosome 2, complete sequence Length = 144391 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 aaaataacaagcaaaaataaaata 54 ||||||||||| |||||||||||| Sbjct: 1514 aaaataacaagaaaaaataaaata 1491
>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel (KCNN3) gene, complete cds Length = 163217 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 ttcttcttctttgcctttgg 466 |||||||||||||||||||| Sbjct: 114728 ttcttcttctttgcctttgg 114747
>gb|AC010651.7|AC010651 Homo sapiens chromosome 16 clone RP11-413O10, complete sequence Length = 165868 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaaataacaagcaaaaataa 50 |||||||||||||||||||| Sbjct: 90499 aaaataacaagcaaaaataa 90518
>gb|AC091394.2|AC091394 Homo sapiens chromosome 5 clone CTD-2231K23, complete sequence Length = 134928 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 ccttgctgcagctgccggtgggta 283 |||| ||||||||||||||||||| Sbjct: 76697 ccttcctgcagctgccggtgggta 76720
>emb|AL606905.8| Mouse DNA sequence from clone RP23-394K13 on chromosome 2, complete sequence Length = 59640 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 aaaataacaagcaaaaataaaata 54 ||||||||||| |||||||||||| Sbjct: 59154 aaaataacaagaaaaaataaaata 59131
>gb|AC009507.3| Homo sapiens BAC clone RP11-543L11 from 2, complete sequence Length = 122213 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 aaaataacaagcaaaaataaaata 54 ||||| |||||||||||||||||| Sbjct: 54432 aaaatcacaagcaaaaataaaata 54409
>gb|AC010002.6|AC010002 Homo sapiens chromosome 7 clone RP11-194N22, complete sequence Length = 169921 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 acaagcaaaaataaaataaa 56 |||||||||||||||||||| Sbjct: 136547 acaagcaaaaataaaataaa 136566
>gb|AC007252.2| Homo sapiens BAC clone RP11-407F2 from 2, complete sequence Length = 159952 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 cctttttcttcttctttgcctttg 465 ||||||||||||| |||||||||| Sbjct: 5264 cctttttcttcttttttgcctttg 5287
>gb|AC007968.3| Homo sapiens BAC clone RP11-430P16 from 2, complete sequence Length = 144319 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 acaagcaaaaataaaataaa 56 |||||||||||||||||||| Sbjct: 46323 acaagcaaaaataaaataaa 46342
>gb|AC009315.5| Homo sapiens BAC clone RP11-466K9 from 2, complete sequence Length = 143794 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 agagaaatcaaacaaatgga 235 |||||||||||||||||||| Sbjct: 128106 agagaaatcaaacaaatgga 128087
>emb|BX649341.3| Zebrafish DNA sequence from clone DKEY-199K11 in linkage group 22, complete sequence Length = 148057 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 70729 gaagagaaatcaaacaaatg 70710
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaataaaataaactgagtgc 64 |||||||||||||||||||| Sbjct: 1152803 aaataaaataaactgagtgc 1152784
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaataaaataaactgagtgc 64 |||||||||||||||||||| Sbjct: 1153029 aaataaaataaactgagtgc 1153010
>emb|BX681418.6| Mouse DNA sequence from clone RP23-191O20 on chromosome X, complete sequence Length = 206167 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 aaataacaagcaaaaataaaataa 55 ||||||| |||||||||||||||| Sbjct: 197651 aaataaccagcaaaaataaaataa 197674
>emb|BX649518.6| Zebrafish DNA sequence from clone CH211-162I8 in linkage group 4, complete sequence Length = 182631 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 49457 gaagagaaatcaaacaaatg 49476
>emb|BX248131.6| Zebrafish DNA sequence from clone CH211-236P5, complete sequence Length = 162685 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 tgaaaataacaagcaaaaataaaataaa 56 |||||| ||||| ||||||||||||||| Sbjct: 22968 tgaaaaaaacaaacaaaaataaaataaa 22995
>gb|AC153577.2| Mus musculus 6 BAC RP23-373I18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 153953 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 acaagcaaaaataaaataaa 56 |||||||||||||||||||| Sbjct: 48122 acaagcaaaaataaaataaa 48103
>emb|BX072532.7| Zebrafish DNA sequence from clone CH211-10B9 in linkage group 12, complete sequence Length = 160268 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 102897 gaagagaaatcaaacaaatg 102916
>emb|CR759833.23| Zebrafish DNA sequence from clone DKEYP-4F2 in linkage group 14, complete sequence Length = 157355 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gaagagaaatcaaacaaatg 233 |||||||||||||||||||| Sbjct: 25314 gaagagaaatcaaacaaatg 25333
>emb|AL929056.21| Zebrafish DNA sequence from clone CH211-227I14 in linkage group 8, complete sequence Length = 157468 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gataatcacaaggcaggaag 214 |||||||||||||||||||| Sbjct: 150916 gataatcacaaggcaggaag 150897
>gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.419_J_16, complete sequence Length = 203591 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 aaaaataaaataaactgagt 62 |||||||||||||||||||| Sbjct: 178605 aaaaataaaataaactgagt 178624
>gb|AC120410.11| Mus musculus chromosome 18, clone RP24-441C8, complete sequence Length = 178807 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 agcaaaaataaaataaactg 59 |||||||||||||||||||| Sbjct: 105860 agcaaaaataaaataaactg 105841
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaataaaataaactgagtgc 64 |||||||||||||||||||| Sbjct: 1194562 aaataaaataaactgagtgc 1194543
>dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-752I5, complete sequence Length = 200108 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 aaaaataaaataaactgagt 62 |||||||||||||||||||| Sbjct: 92810 aaaaataaaataaactgagt 92791
>dbj|AP003158.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-662M24, complete sequences Length = 194260 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 tttttcttcttctttgcctt 463 |||||||||||||||||||| Sbjct: 49644 tttttcttcttctttgcctt 49625
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaataaaataaactgagtgc 64 |||||||||||||||||||| Sbjct: 1120028 aaataaaataaactgagtgc 1120009
>gb|AC130654.2| Mus musculus strain C57BL/6J chromosome 18 clone rp23-410i12, complete sequence Length = 186254 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 gcctttttcttcttctttgccttt 464 |||||||||||||||||| ||||| Sbjct: 65349 gcctttttcttcttcttttccttt 65326
>gb|AC171211.1| Mus musculus BAC clone RP23-34I14 from chromosome 16, complete sequence Length = 230462 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 tttttcttcttctttgcctt 463 |||||||||||||||||||| Sbjct: 34458 tttttcttcttctttgcctt 34439
>gb|AC167980.2| Mus musculus BAC clone RP23-28M3 from chromosome 9, complete sequence Length = 221376 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cacaaggcaggaagaagaga 220 |||||||||||||||||||| Sbjct: 206065 cacaaggcaggaagaagaga 206084
>emb|AL731707.12| Mouse DNA sequence from clone RP23-100C5 on chromosome 2, complete sequence Length = 205581 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 acaagcaaaaataaaataaa 56 |||||||||||||||||||| Sbjct: 12331 acaagcaaaaataaaataaa 12312
>gb|AC026709.7| Homo sapiens chromosome 5 clone CTD-2084I18, complete sequence Length = 139402 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aacaagcaaaaataaaataa 55 |||||||||||||||||||| Sbjct: 8578 aacaagcaaaaataaaataa 8597
>emb|AL713979.6| Mouse DNA sequence from clone RP23-434O7 on chromosome X, complete sequence Length = 148507 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 cctttttcttcttctttgcctttg 465 |||||||||| ||||||||||||| Sbjct: 27874 cctttttctttttctttgcctttg 27851 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,774,448 Number of Sequences: 3902068 Number of extensions: 6774448 Number of successful extensions: 272811 Number of sequences better than 10.0: 147 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 271835 Number of HSP's gapped (non-prelim): 947 length of query: 508 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 486 effective length of database: 17,147,199,772 effective search space: 8333539089192 effective search space used: 8333539089192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
