Clone Name | rbart34b08 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb) | 37 | 0.023 | 2 | CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin) | 35 | 0.067 |
---|
>MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb)| Length = 2567 Score = 37.0 bits (84), Expect = 0.023 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = -3 Query: 422 EPTGERVQVH*PEAQGPGDGVRAGAAEYIRDGEEP 318 EP G+ Q P+AQGPG+GVR G AE ++G EP Sbjct: 257 EPQGKDRQGTRPQAQGPGEGVRPGKAE--KEGAEP 289
>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)| Length = 637 Score = 35.4 bits (80), Expect = 0.067 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = -3 Query: 431 GRGEPTGERVQVH*PEAQG--PGDGVRAGAAEYIRDGEEPPGERDAAGATTK*RRPRQ 264 G +P E V+V E +G PG+ V AAE EP G DAAG RP++ Sbjct: 264 GSPQPRSEAVEVAAAENEGHSPGESVEDAAAEEAAGTREPEGSEDAAGEDGDQGRPQE 321 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,856,954 Number of Sequences: 219361 Number of extensions: 1426252 Number of successful extensions: 3936 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3792 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3928 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)