ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart34b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103991.1| Zea mays PCO115355 mRNA sequence 293 3e-76
2dbj|AK073934.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
4dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
5emb|AJ313098.1|BVU313098 Beta vulgaris mRNA for salt tolerance p... 113 6e-22
6emb|BX829484.1|CNS0A08A Arabidopsis thaliana Full-length cDNA Co... 96 1e-16
7ref|NM_124719.2| Arabidopsis thaliana unknown protein AT5G53400 ... 94 5e-16
8gb|AY087741.1| Arabidopsis thaliana clone 38105 mRNA, complete s... 94 5e-16
9gb|BT003074.1| Arabidopsis thaliana At5g53400 gene, complete cds 94 5e-16
10ref|NM_118927.2| Arabidopsis thaliana unknown protein AT4G27890 ... 90 8e-15
11gb|AY142524.1| Arabidopsis thaliana unknown protein (At4g27890) ... 90 8e-15
12gb|DQ228329.1| Solanum tuberosum clone 137D05 salt tolerance pro... 86 1e-13
13emb|CR731685.2|CNS0GRII Tetraodon nigroviridis full-length cDNA 70 7e-09
14emb|CR731414.2|CNS0GRAZ Tetraodon nigroviridis full-length cDNA 70 7e-09
15emb|CR694454.2|CNS0FYSI Tetraodon nigroviridis full-length cDNA 70 7e-09
16emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, ... 68 3e-08
17emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, ... 68 3e-08
18emb|AL078579.1|ATT27E11 Arabidopsis thaliana DNA chromosome 4, B... 68 3e-08
19emb|BX024110.1|CNS08QRM Single read from an extremity of a full-... 66 1e-07
20emb|BX019083.1|CNS08MVZ Single read from an extremity of a full-... 66 1e-07
21emb|BX018957.1|CNS08MSH Single read from an extremity of a full-... 66 1e-07
22emb|BX014275.1|CNS08J6F Single read from an extremity of a full-... 66 1e-07
23emb|BX012329.1|CNS08HOD Single read from an extremity of a full-... 66 1e-07
24emb|BX009108.1|CNS08F6W Single read from an extremity of a full-... 66 1e-07
25emb|BX008286.1|CNS08EK2 Single read from an extremity of a full-... 66 1e-07
26ref|XM_316177.2| Anopheles gambiae str. PEST ENSANGP00000019739 ... 66 1e-07
27gb|DQ440499.1| Aedes aegypti clone AET-8714 nuclear distribution... 64 5e-07
28ref|NM_001017914.1| Danio rerio zgc:92147 (zgc:92147), mRNA 62 2e-06
29gb|BC068353.1| Danio rerio nuclear distribution gene C homolog, ... 62 2e-06
30gb|BC088384.1| Danio rerio zgc:92147, mRNA (cDNA clone MGC:92147... 62 2e-06
31ref|XM_657693.1| Aspergillus nidulans FGSC A4 nuclear movement p... 56 1e-04
32gb|AC134822.19| Medicago truncatula clone mth2-15j20, complete s... 56 1e-04
33gb|AY328470.1| Drosophila melanogaster nuclear migration protein... 56 1e-04
34ref|NM_140666.2| Drosophila melanogaster nudC CG9710-RA (nudC), ... 56 1e-04
35gb|AC010751.5| Drosophila melanogaster 3L BAC RP98-9A23 (Roswell... 56 1e-04
36gb|AY071485.1| Drosophila melanogaster RE55422 full length cDNA 56 1e-04
37dbj|AK108973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
38gb|AC006933.3|AC006933 Drosophila melanogaster, chromosome 3L, r... 56 1e-04
39emb|X52565.1|ANNMP A. nidulans gene for nuclear movement protein 56 1e-04
40gb|AE003526.4| Drosophila melanogaster chromosome 3L, section 59... 56 1e-04
41emb|BX012330.1|CNS08HOE Single read from an extremity of a full-... 54 4e-04
42gb|BC045909.1| Danio rerio nuclear distribution gene C homolog, ... 54 4e-04
43ref|NM_200919.1| Danio rerio nuclear distribution gene C homolog... 54 4e-04
44emb|X82445.1|RNRNUDC R.norvegicus C15 mRNA 52 0.002
45gb|BC065581.1| Rattus norvegicus nuclear distribution gene C hom... 52 0.002
46ref|NM_017271.1| Rattus norvegicus nuclear distribution gene C h... 52 0.002
47ref|XM_802217.1| Trypanosoma cruzi strain CL Brener hypothetical... 48 0.027
48ref|XM_810176.1| Trypanosoma cruzi strain CL Brener hypothetical... 48 0.027
49ref|XM_662825.1| Cryptosporidium hominis TU502 nuclear distribut... 48 0.027
50ref|XM_628588.1| Cryptosporidium parvum Iowa II NudC ortholog (c... 48 0.027
51ref|XM_467748.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
52ref|XM_506966.1| PREDICTED Oryza sativa (japonica cultivar-group... 46 0.11
53ref|XM_590940.2| PREDICTED: Bos taurus similar to nuclear distri... 46 0.11
54ref|XM_878820.1| PREDICTED: Bos taurus similar to nuclear distri... 46 0.11
55ref|XM_878789.1| PREDICTED: Bos taurus similar to nuclear distri... 46 0.11
56ref|XM_878762.1| PREDICTED: Bos taurus similar to nuclear distri... 46 0.11
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
58dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
59dbj|AK070302.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
60dbj|AK064134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
61gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence 44 0.43
62gb|AC159450.1| Trypanosoma brucei chromosome 7 clone RPCI93-5F10... 44 0.43
63ref|NM_006996.1| Homo sapiens solute carrier family 19 (thiamine... 44 0.43
64ref|NM_010948.1| Mus musculus nuclear distribution gene C homolo... 44 0.43
65ref|XM_753686.1| Ustilago maydis 521 hypothetical protein (UM026... 44 0.43
66ref|XM_819772.1| Trypanosoma brucei TREU927 clone RPCI93-5F10 hy... 44 0.43
67emb|AJ238413.1|HSA238413 Homo sapiens TRMA gene for thiamine tra... 44 0.43
68gb|BC018514.1| Homo sapiens solute carrier family 19 (thiamine t... 44 0.43
69emb|AL021068.2|HS206D15 Human DNA sequence from clone RP1-206D15... 44 0.43
70ref|XM_963045.1| PREDICTED: Tribolium castaneum similar to Nucle... 44 0.43
71emb|Y15522.1|MMNUDC Mus musculus mRNA for MNUDC protein 44 0.43
72emb|X81443.1|MMSIG92 M.musculus SIG-92 mRNA 44 0.43
73gb|AC163090.5| Mus musculus chromosome 8, clone RP23-457I3, comp... 44 0.43
74dbj|AK146323.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-... 44 0.43
75dbj|AK032673.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 44 0.43
76ref|NR_001572.1| Mus musculus nuclear distribution gene C homolo... 44 0.43
77dbj|AK012777.1| Mus musculus 10, 11 days embryo whole body cDNA,... 44 0.43
78dbj|AK012321.1| Mus musculus 11 days embryo whole body cDNA, RIK... 44 0.43
79gb|AC069471.4|AC069471 Arabidopsis thaliana chromosome 1 BAC F13... 44 0.43
80dbj|AB020754.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.43
81emb|AJ237724.1|HSA237724 Homo sapiens mRNA for thiamine transpor... 44 0.43
82gb|AF160812.1|AF160812 Homo sapiens thiamine transporter 1 (THT1... 44 0.43
83gb|AF135488.1|AF135488 Homo sapiens high affinity thiamine trans... 44 0.43
84gb|AF153330.1|AF153330 Homo sapiens thiamine carrier 1 (TC1) mRN... 44 0.43
85gb|AC124121.18| Mus musculus chromosome 8, clone RP23-169B14, co... 44 0.43
86gb|BC011253.1| Mus musculus nuclear distribution gene C homolog ... 44 0.43
87dbj|AB209540.1| Homo sapiens mRNA for solute carrier family 19, ... 44 0.43
88gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, com... 42 1.7
89gb|AC119735.3| Homo sapiens 3 BAC RP11-78E9 (Roswell Park Cancer... 42 1.7
90gb|DQ311385.1| Bombyx mori nuclear migration protein nudC mRNA, ... 42 1.7
91emb|BX649203.1| Mouse DNA sequence from clone RP23-24C12 on chro... 42 1.7
92emb|BX248403.6| Zebrafish DNA sequence from clone DKEY-30H14 in ... 42 1.7
93gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, co... 42 1.7
94ref|XM_516208.1| PREDICTED: Pan troglodytes neural precursor cel... 40 6.6
95ref|XM_324295.1| Neurospora crassa OR74A predicted protein (NCU0... 40 6.6
96ref|XM_954294.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
97gb|AC126433.3| Mus musculus BAC clone RP24-468I23 from chromosom... 40 6.6
98gb|AC117241.4| Mus musculus BAC clone RP24-147H15 from chromosom... 40 6.6
99ref|NM_004404.3| Homo sapiens septin 2 (SEPT2), transcript varia... 40 6.6
100ref|NM_006155.1| Homo sapiens septin 2 (SEPT2), transcript varia... 40 6.6
101ref|NM_001008491.1| Homo sapiens septin 2 (SEPT2), transcript va... 40 6.6
102ref|NM_001008492.1| Homo sapiens septin 2 (SEPT2), transcript va... 40 6.6
103gb|AC068909.31| Mus musculus BAC Clone 407f20 RPCI-23, complete ... 40 6.6
104gb|BC033559.1| Homo sapiens septin 2, mRNA (cDNA clone MGC:42401... 40 6.6
105emb|AL645532.16| Mouse DNA sequence from clone RP23-295E4 on chr... 40 6.6
106emb|CR859207.1| Pongo pygmaeus mRNA; cDNA DKFZp459B1331 (from cl... 40 6.6
107gb|AC103819.3| Homo sapiens chromosome 8, clone CTD-3056O22, com... 40 6.6
108emb|CR860673.1| Pongo pygmaeus mRNA; cDNA DKFZp459F2415 (from cl... 40 6.6
109emb|CR860136.1| Pongo pygmaeus mRNA; cDNA DKFZp469J1819 (from cl... 40 6.6
110emb|CR859154.1| Pongo pygmaeus mRNA; cDNA DKFZp459I0429 (from cl... 40 6.6
111emb|CR857766.1| Pongo pygmaeus mRNA; cDNA DKFZp469E2428 (from cl... 40 6.6
112emb|CR847517.1| Human DNA sequence from clone XX-NCIH2171_9D08, ... 40 6.6
113gb|AC108925.8| Homo sapiens chromosome 8, clone RP11-1136L8, com... 40 6.6
114emb|CR625560.1| full-length cDNA clone CS0DI002YF22 of Placenta ... 40 6.6
115emb|CR589975.1| full-length cDNA clone CS0DF034YE13 of Fetal bra... 40 6.6
116gb|AC013602.4|AC013602 Homo sapiens, clone RP11-10C6, complete s... 40 6.6
117gb|AC103736.5| Homo sapiens chromosome 11, clone RP11-703E9, com... 40 6.6
118dbj|D28540.1|HUMDIFF6 Homo sapiens mRNA for Diff6, H5, CDC10 hom... 40 6.6
119gb|AC104841.6| Homo sapiens BAC clone RP11-475G3 from 2, complet... 40 6.6
120gb|AC103681.4| Homo sapiens chromosome 11, clone CTD-2560E9, com... 40 6.6
121emb|BX648000.1|HSM808146 Homo sapiens mRNA; cDNA DKFZp686E1159 (... 40 6.6
122dbj|D63878.1| Homo sapiens mRNA for KIAA0158 gene, partial cds 40 6.6
123gb|AY610051.1| Sus scrofa clone Clu_60320.scr.msk.p1.Contig1, mR... 40 6.6
124gb|AF038404.1|AF038404 Homo sapiens homolog of Nedd5 (hNedd5) mR... 40 6.6
125gb|AC068908.21| Mus musculus BAC Clone 389o18 RPCI-23, complete ... 40 6.6
126gb|BC014455.1| Homo sapiens septin 2, transcript variant 1, mRNA... 40 6.6
127gb|AF315312.2| Homo sapiens chromosome 8 clone RP1-80K22 map 8q2... 40 6.6 
>gb|AY103991.1| Zea mays PCO115355 mRNA sequence
          Length = 1407

 Score =  293 bits (148), Expect = 3e-76
 Identities = 217/240 (90%)
 Strand = Plus / Minus

                                                                       
Query: 252 gagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatt 311
           |||||||||||||| ||||||| |||||||||||||||||| || |||||||| ||||||
Sbjct: 938 gagaagtccatctccgggtgctcagacatgaacttcttgagaatttcttgcttttgcatt 879

                                                                       
Query: 312 tcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctccaca 371
           |||||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 878 tcatcacttgtcggaaggcccatctgcttctggcgctggtcaaacatcatcttctccaca 819

                                                                       
Query: 372 gtttgcctagtctcaggatccagttcagaaagcttgctattctctggttccaccttttgg 431
           ||||| ||||||||||||||||  ||||| || ||||| ||||| |||||||||||||||
Sbjct: 818 gtttgtctagtctcaggatccaaatcagagagtttgctgttctcaggttccaccttttgg 759

                                                                       
Query: 432 gtgtcaacttcagggtcacctttgatcacagatttccaccactccatttgattgtgcttt 491
           || |||||||||||| |||| || || ||||| ||||||||||||||||| |||||||||
Sbjct: 758 gtatcaacttcagggccaccctttataacagacttccaccactccatttggttgtgcttt 699
to top
>dbj|AK073934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076L21, full
            insert sequence
          Length = 1282

 Score =  272 bits (137), Expect = 1e-69
 Identities = 218/245 (88%)
 Strand = Plus / Minus

                                                                        
Query: 247  catttgagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
            |||| |||||||||||||| |||||||||| |||||| ||||||||||||||||||||||
Sbjct: 1016 cattggagaagtccatctccgggtgctgagccatgaatttcttgagcatgtcttgcttct 957

                                                                        
Query: 307  gcatttcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttct 366
            |||||||||||||||| || ||||||||||||||||| || |||||||||||||||||||
Sbjct: 956  gcatttcatcacttgttggaagacccatctgcttctggcgttgatcaaacatcatcttct 897

                                                                        
Query: 367  ccacagtttgcctagtctcaggatccagttcagaaagcttgctattctctggttccacct 426
            |||||||||| | |||||| |||||||  ||||  || ||||| ||||| ||||||||||
Sbjct: 896  ccacagtttgtcgagtctctggatccaaatcagcgagtttgctgttctccggttccacct 837

                                                                        
Query: 427  tttgggtgtcaacttcagggtcacctttgatcacagatttccaccactccatttgattgt 486
            | || || ||||||||||||||||| || |  || ||||||||||||||||||||||| |
Sbjct: 836  tctgtgtatcaacttcagggtcacccttcactacggatttccaccactccatttgatttt 777

                 
Query: 487  gcttt 491
            |||||
Sbjct: 776  gcttt 772
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  121 bits (61), Expect = 2e-24
 Identities = 79/85 (92%)
 Strand = Plus / Minus

                                                                           
Query: 272     ctgagacatgaacttcttgagcatgtcttgcttctgcatttcatcacttgtcggcagacc 331
               ||||| |||||| |||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 6807002 ctgagccatgaatttcttgagcatgtcttgcttctgcatttcatcacttgttggaagacc 6806943

                                        
Query: 332     catctgcttctgacgctgatcaaac 356
               |||||||||||| || |||||||||
Sbjct: 6806942 catctgcttctggcgttgatcaaac 6806918



 Score =  119 bits (60), Expect = 9e-24
 Identities = 117/136 (86%)
 Strand = Plus / Minus

                                                                           
Query: 356     catcatcttctccacagtttgcctagtctcaggatccagttcagaaagcttgctattctc 415
               ||||||||||||||||||||| | |||||| |||||||  ||||  || ||||| |||||
Sbjct: 6806820 catcatcttctccacagtttgtcgagtctctggatccaaatcagcgagtttgctgttctc 6806761

                                                                           
Query: 416     tggttccaccttttgggtgtcaacttcagggtcacctttgatcacagatttccaccactc 475
                ||||||||||| || || ||||||||||||||||| || |  || ||||||||||||||
Sbjct: 6806760 cggttccaccttctgtgtatcaacttcagggtcacccttcactacggatttccaccactc 6806701

                               
Query: 476     catttgattgtgcttt 491
               ||||||||| ||||||
Sbjct: 6806700 catttgattttgcttt 6806685



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 247     catttgagaagtccatctctgggtgctg 274
               |||| |||||||||||||| ||||||||
Sbjct: 6807121 cattggagaagtccatctccgggtgctg 6807094
to top
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0525F01
          Length = 151668

 Score =  121 bits (61), Expect = 2e-24
 Identities = 79/85 (92%)
 Strand = Plus / Minus

                                                                          
Query: 272    ctgagacatgaacttcttgagcatgtcttgcttctgcatttcatcacttgtcggcagacc 331
              ||||| |||||| |||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 136681 ctgagccatgaatttcttgagcatgtcttgcttctgcatttcatcacttgttggaagacc 136622

                                       
Query: 332    catctgcttctgacgctgatcaaac 356
              |||||||||||| || |||||||||
Sbjct: 136621 catctgcttctggcgttgatcaaac 136597



 Score =  119 bits (60), Expect = 9e-24
 Identities = 117/136 (86%)
 Strand = Plus / Minus

                                                                          
Query: 356    catcatcttctccacagtttgcctagtctcaggatccagttcagaaagcttgctattctc 415
              ||||||||||||||||||||| | |||||| |||||||  ||||  || ||||| |||||
Sbjct: 136499 catcatcttctccacagtttgtcgagtctctggatccaaatcagcgagtttgctgttctc 136440

                                                                          
Query: 416    tggttccaccttttgggtgtcaacttcagggtcacctttgatcacagatttccaccactc 475
               ||||||||||| || || ||||||||||||||||| || |  || ||||||||||||||
Sbjct: 136439 cggttccaccttctgtgtatcaacttcagggtcacccttcactacggatttccaccactc 136380

                              
Query: 476    catttgattgtgcttt 491
              ||||||||| ||||||
Sbjct: 136379 catttgattttgcttt 136364



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 247    catttgagaagtccatctctgggtgctg 274
              |||| |||||||||||||| ||||||||
Sbjct: 136800 cattggagaagtccatctccgggtgctg 136773
to top
>emb|AJ313098.1|BVU313098 Beta vulgaris mRNA for salt tolerance protein 5 (sato5 gene)
          Length = 888

 Score =  113 bits (57), Expect = 6e-22
 Identities = 186/229 (81%)
 Strand = Plus / Minus

                                                                       
Query: 255 aagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatttca 314
           |||||||| || || ||||  |||||||||||||| |||||||||||||||||||| |||
Sbjct: 866 aagtccatttccggatgctcggacatgaacttcttcagcatgtcttgcttctgcatatca 807

                                                                       
Query: 315 tcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctccacagtt 374
           |||||||| ||||  |||||    || || |  || ||||||||||||||||| ||||||
Sbjct: 806 tcacttgtgggcaagcccatggatttttgcctttggtcaaacatcatcttctcaacagtt 747

                                                                       
Query: 375 tgcctagtctcaggatccagttcagaaagcttgctattctctggttccaccttttgggtg 434
             ||| || ||||| ||||  ||||| ||||| ||  |||| ||||| ||||| || |||
Sbjct: 746 gaccttgtttcagggtccaagtcagacagcttactgctctcaggttcaaccttctgagtg 687

                                                            
Query: 435 tcaacttcagggtcacctttgatcacagatttccaccactccatttgat 483
           || | |||||| |||||||||| || |  | ||||||||||||||||||
Sbjct: 686 tcgatttcaggttcacctttgaccagacttctccaccactccatttgat 638
to top
>emb|BX829484.1|CNS0A08A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB16ZF04 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1147

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 108/128 (84%)
 Strand = Plus / Minus

                                                                        
Query: 247  catttgagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
            ||||||||||||||||||| || |||| |||||||||  |||| || || ||||||||||
Sbjct: 1014 catttgagaagtccatctccggatgctcagacatgaatatcttaaggatctcttgcttct 955

                                                                        
Query: 307  gcatttcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttct 366
            | |  || || |||||||| |||||||||||||| || |  |||||||||||||| ||||
Sbjct: 954  gtagctcctcgcttgtcggaagacccatctgcttttgcctttgatcaaacatcattttct 895

                    
Query: 367  ccacagtt 374
            | ||||||
Sbjct: 894  caacagtt 887
to top
>ref|NM_124719.2| Arabidopsis thaliana unknown protein AT5G53400 mRNA, complete cds
          Length = 1229

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 107/127 (84%)
 Strand = Plus / Minus

                                                                        
Query: 247  catttgagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
            ||||||||||||||||||| || |||| ||||||||| ||||| || || ||||||||||
Sbjct: 1026 catttgagaagtccatctccggatgctcagacatgaatttcttaaggatctcttgcttct 967

                                                                        
Query: 307  gcatttcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttct 366
            | |  || || ||||| || |||||||||||||| || |  |||||||||||||| ||||
Sbjct: 966  gtagctcctcgcttgttggaagacccatctgcttttgcctttgatcaaacatcattttct 907

                   
Query: 367  ccacagt 373
            | |||||
Sbjct: 906  caacagt 900
to top
>gb|AY087741.1| Arabidopsis thaliana clone 38105 mRNA, complete sequence
          Length = 1227

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 107/127 (84%)
 Strand = Plus / Minus

                                                                        
Query: 247  catttgagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
            ||||||||||||||||||| || |||| ||||||||| ||||| || || ||||||||||
Sbjct: 1028 catttgagaagtccatctccggatgctcagacatgaatttcttaaggatctcttgcttct 969

                                                                        
Query: 307  gcatttcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttct 366
            | |  || || ||||| || |||||||||||||| || |  |||||||||||||| ||||
Sbjct: 968  gtagctcctcgcttgttggaagacccatctgcttttgcctttgatcaaacatcattttct 909

                   
Query: 367  ccacagt 373
            | |||||
Sbjct: 908  caacagt 902
to top
>gb|BT003074.1| Arabidopsis thaliana At5g53400 gene, complete cds
          Length = 915

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 107/127 (84%)
 Strand = Plus / Minus

                                                                       
Query: 247 catttgagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
           ||||||||||||||||||| || |||| ||||||||| ||||| || || ||||||||||
Sbjct: 901 catttgagaagtccatctccggatgctcagacatgaatttcttaaggatctcttgcttct 842

                                                                       
Query: 307 gcatttcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttct 366
           | |  || || ||||| || |||||||||||||| || |  |||||||||||||| ||||
Sbjct: 841 gtagctcctcgcttgttggaagacccatctgcttttgcctttgatcaaacatcattttct 782

                  
Query: 367 ccacagt 373
           | |||||
Sbjct: 781 caacagt 775
to top
>ref|NM_118927.2| Arabidopsis thaliana unknown protein AT4G27890 mRNA, complete cds
          Length = 913

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 102/121 (84%)
 Strand = Plus / Minus

                                                                       
Query: 247 catttgagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
           |||| |||||||||||| | || | ||||| |||||||||||||||||| |||| |||||
Sbjct: 868 cattagagaagtccatcccaggattctgagccatgaacttcttgagcatatctttcttct 809

                                                                       
Query: 307 gcatttcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttct 366
             || ||||||||  | || || |||||||||||||| |  |||||||||||||||||||
Sbjct: 808 ctatctcatcactccttggtagtcccatctgcttctgcctttgatcaaacatcatcttct 749

            
Query: 367 c 367
           |
Sbjct: 748 c 748
to top
>gb|AY142524.1| Arabidopsis thaliana unknown protein (At4g27890) mRNA, complete cds
          Length = 913

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 102/121 (84%)
 Strand = Plus / Minus

                                                                       
Query: 247 catttgagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
           |||| |||||||||||| | || | ||||| |||||||||||||||||| |||| |||||
Sbjct: 868 cattagagaagtccatcccaggattctgagccatgaacttcttgagcatatctttcttct 809

                                                                       
Query: 307 gcatttcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttct 366
             || ||||||||  | || || |||||||||||||| |  |||||||||||||||||||
Sbjct: 808 ctatctcatcactccttggtagtcccatctgcttctgcctttgatcaaacatcatcttct 749

            
Query: 367 c 367
           |
Sbjct: 748 c 748
to top
>gb|DQ228329.1| Solanum tuberosum clone 137D05 salt tolerance protein 5-like
           protein mRNA, complete cds
          Length = 1289

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 240 atcttcacatttgagaagtccatctctgggtgctgagacatgaacttcttgagcatgtct 299
           |||||| | |||||||||||||| || || ||||  | ||| || |||||||| || |||
Sbjct: 999 atcttcgcctttgagaagtccatttcaggatgctctgccataaatttcttgagaatttct 940

                                                                       
Query: 300 tgcttctgcatttcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatc 359
           || ||||||   ||||||||||| || ||||||||    ||||| |||||||||||||||
Sbjct: 939 tgtttctgcgactcatcacttgttggaagacccatggatttctgtcgctgatcaaacatc 880

                          
Query: 360 atcttctccacagtt 374
           |||||||||||||||
Sbjct: 879 atcttctccacagtt 865
to top
>emb|CR731685.2|CNS0GRII Tetraodon nigroviridis full-length cDNA
          Length = 1239

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 252  gagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
            ||||| ||||||||||||||||| | |||||||||||| || |||||||||||||
Sbjct: 1095 gagaaatccatctctgggtgctgcgccatgaacttcttcaggatgtcttgcttct 1041



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 71   gagaagtccatctctgggtgctgc 94
            ||||| ||||||||||||||||||
Sbjct: 1095 gagaaatccatctctgggtgctgc 1072
to top
>emb|CR731414.2|CNS0GRAZ Tetraodon nigroviridis full-length cDNA
          Length = 1256

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 252  gagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
            ||||| ||||||||||||||||| | |||||||||||| || |||||||||||||
Sbjct: 1096 gagaaatccatctctgggtgctgcgccatgaacttcttcaggatgtcttgcttct 1042



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 71   gagaagtccatctctgggtgctgc 94
            ||||| ||||||||||||||||||
Sbjct: 1096 gagaaatccatctctgggtgctgc 1073
to top
>emb|CR694454.2|CNS0FYSI Tetraodon nigroviridis full-length cDNA
          Length = 1198

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 252  gagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
            ||||| ||||||||||||||||| | |||||||||||| || |||||||||||||
Sbjct: 1077 gagaaatccatctctgggtgctgcgccatgaacttcttcaggatgtcttgcttct 1023



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 71   gagaagtccatctctgggtgctgc 94
            ||||| ||||||||||||||||||
Sbjct: 1077 gagaaatccatctctgggtgctgc 1054
to top
>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68
          Length = 199749

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                        
Query: 247  catttgagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
            |||| |||||||||||| | || | ||||| |||||||||||||||||| |||| |||||
Sbjct: 2689 cattagagaagtccatcccaggattctgagccatgaacttcttgagcatatctttcttct 2630

                                                              
Query: 307  gcatttcatcacttgtcggcagacccatctgcttctgacgctgatcaaac 356
              || ||||||||  | || || |||||||||||||| |  |||||||||
Sbjct: 2629 ctatctcatcactccttggtagtcccatctgcttctgcctttgatcaaac 2580
to top
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67
          Length = 200001

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                          
Query: 247    catttgagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
              |||| |||||||||||| | || | ||||| |||||||||||||||||| |||| |||||
Sbjct: 197690 cattagagaagtccatcccaggattctgagccatgaacttcttgagcatatctttcttct 197631

                                                                
Query: 307    gcatttcatcacttgtcggcagacccatctgcttctgacgctgatcaaac 356
                || ||||||||  | || || |||||||||||||| |  |||||||||
Sbjct: 197630 ctatctcatcactccttggtagtcccatctgcttctgcctttgatcaaac 197581
to top
>emb|AL078579.1|ATT27E11 Arabidopsis thaliana DNA chromosome 4, BAC clone T27E11, partial
             sequence (ESSA project)
          Length = 43955

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                         
Query: 247   catttgagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttct 306
             |||| |||||||||||| | || | ||||| |||||||||||||||||| |||| |||||
Sbjct: 41403 cattagagaagtccatcccaggattctgagccatgaacttcttgagcatatctttcttct 41344

                                                               
Query: 307   gcatttcatcacttgtcggcagacccatctgcttctgacgctgatcaaac 356
               || ||||||||  | || || |||||||||||||| |  |||||||||
Sbjct: 41343 ctatctcatcactccttggtagtcccatctgcttctgcctttgatcaaac 41294
to top
>emb|BX024110.1|CNS08QRM Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA36DB09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 830

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                       
Query: 255 aagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatttca 314
           ||||||||||| || |||||   ||||||||| || |||||||| ||||||| |   || 
Sbjct: 785 aagtccatctcgggatgctgttccatgaactttttcagcatgtcctgcttcttctgctcg 726

                                                                
Query: 315 tcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctc 367
           ||||| |||||||||||||||| ||| || ||||| ||  |||||||||||||
Sbjct: 725 tcactcgtcggcagacccatctccttttgccgctggtcgtacatcatcttctc 673
to top
>emb|BX019083.1|CNS08MVZ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA29AA01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 652

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                       
Query: 255 aagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatttca 314
           ||||||||||| || |||||   ||||||||| || |||||||| ||||||| |   || 
Sbjct: 346 aagtccatctcgggatgctgttccatgaactttttcagcatgtcctgcttcttctgctcg 405

                                                                
Query: 315 tcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctc 367
           ||||| |||||||||||||||| ||| || ||||| ||  |||||||||||||
Sbjct: 406 tcactcgtcggcagacccatctccttttgccgctggtcgtacatcatcttctc 458
to top
>emb|BX018957.1|CNS08MSH Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA28DB08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 894

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                       
Query: 255 aagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatttca 314
           ||||||||||| || |||||   ||||||||| || |||||||| ||||||| |   || 
Sbjct: 312 aagtccatctcgggatgctgttccatgaactttttcagcatgtcctgcttcttctgctcg 371

                                                                
Query: 315 tcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctc 367
           ||||| |||||||||||||||| ||| || ||||| ||  |||||||||||||
Sbjct: 372 tcactcgtcggcagacccatctccttttgccgctggtcgtacatcatcttctc 424
to top
>emb|BX014275.1|CNS08J6F Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA21BG07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 611

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                       
Query: 255 aagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatttca 314
           ||||||||||| || |||||   ||||||||| || |||||||| ||||||| |   || 
Sbjct: 357 aagtccatctcgggatgctgttccatgaactttttcagcatgtcctgcttcttctgctcg 416

                                                                
Query: 315 tcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctc 367
           ||||| |||||||||||||||| ||| || ||||| ||  |||||||||||||
Sbjct: 417 tcactcgtcggcagacccatctccttttgccgctggtcgtacatcatcttctc 469
to top
>emb|BX012329.1|CNS08HOD Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA19CD07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 876

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                       
Query: 255 aagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatttca 314
           ||||||||||| || |||||   ||||||||| || |||||||| ||||||| |   || 
Sbjct: 786 aagtccatctcgggatgctgttccatgaactttttcagcatgtcctgcttcttctgctcg 727

                                                                
Query: 315 tcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctc 367
           ||||| |||||||||||||||| ||| || ||||| ||  |||||||||||||
Sbjct: 726 tcactcgtcggcagacccatctccttttgccgctggtcgtacatcatcttctc 674
to top
>emb|BX009108.1|CNS08F6W Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA14DD04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 993

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                       
Query: 255 aagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatttca 314
           ||||||||||| || |||||   ||||||||| || |||||||| ||||||| |   || 
Sbjct: 356 aagtccatctcgggatgctgttccatgaactttttcagcatgtcctgcttcttctgctcg 415

                                                                
Query: 315 tcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctc 367
           ||||| |||||||||||||||| ||| || ||||| ||  |||||||||||||
Sbjct: 416 tcactcgtcggcagacccatctccttttgccgctggtcgtacatcatcttctc 468
to top
>emb|BX008286.1|CNS08EK2 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA13CF12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 934

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                       
Query: 255 aagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatttca 314
           ||||||||||| || |||||   ||||||||| || |||||||| ||||||| |   || 
Sbjct: 357 aagtccatctcgggatgctgttccatgaactttttcagcatgtcctgcttcttctgctcg 416

                                                                
Query: 315 tcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctc 367
           ||||| |||||||||||||||| ||| || ||||| ||  |||||||||||||
Sbjct: 417 tcactcgtcggcagacccatctccttttgccgctggtcgtacatcatcttctc 469
to top
>ref|XM_316177.2| Anopheles gambiae str. PEST ENSANGP00000019739 (ENSANGG00000017250),
            mRNA
          Length = 1441

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                        
Query: 255  aagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatttca 314
            ||||||||||| || |||||   ||||||||| || |||||||| ||||||| |   || 
Sbjct: 1080 aagtccatctcgggatgctgttccatgaactttttcagcatgtcctgcttcttctgctcg 1021

                                                                 
Query: 315  tcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctc 367
            ||||| |||||||||||||||| ||| || ||||| ||  |||||||||||||
Sbjct: 1020 tcactcgtcggcagacccatctccttttgccgctggtcgtacatcatcttctc 968
to top
>gb|DQ440499.1| Aedes aegypti clone AET-8714 nuclear distribution protein NUDC
           mRNA, complete cds
          Length = 978

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 252 gagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatt 311
           |||||||||||||| || || ||   ||| |||||||| ||||  |||||||| | |   
Sbjct: 959 gagaagtccatctccggatgttgttgcataaacttcttcagcacatcttgctttttctgc 900

                                                                   
Query: 312 tcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctc 367
           ||||| ||||||||||| ||||||| |||||| ||||| || ||||||||||||||
Sbjct: 899 tcatcgcttgtcggcagtcccatctccttctgtcgctggtcgaacatcatcttctc 844
to top
>ref|NM_001017914.1| Danio rerio zgc:92147 (zgc:92147), mRNA
          Length = 5982

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 252  gagaagtccatctctgggtgctgagacatgaacttcttgagcatgtc 298
            ||||||||||||||||| ||||||| |||||||||||| || |||||
Sbjct: 5738 gagaagtccatctctggatgctgagccatgaacttcttcaggatgtc 5692
to top
>gb|BC068353.1| Danio rerio nuclear distribution gene C homolog, mRNA (cDNA clone
            MGC:85670 IMAGE:6960601), complete cds
          Length = 1356

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 252  gagaagtccatctctgggtgctgagacatgaacttcttgagcatgtc 298
            ||||||||||||||||| ||||||| |||||||||||| || |||||
Sbjct: 1082 gagaagtccatctctggatgctgagccatgaacttcttcaggatgtc 1036
to top
>gb|BC088384.1| Danio rerio zgc:92147, mRNA (cDNA clone MGC:92147 IMAGE:7049619),
            complete cds
          Length = 5982

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 252  gagaagtccatctctgggtgctgagacatgaacttcttgagcatgtc 298
            ||||||||||||||||| ||||||| |||||||||||| || |||||
Sbjct: 5738 gagaagtccatctctggatgctgagccatgaacttcttcaggatgtc 5692
to top
>ref|XM_657693.1| Aspergillus nidulans FGSC A4 nuclear movement protein NudC
           (AN5181.2), mRNA
          Length = 597

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 312 tcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctc 367
           |||||||| ||||||   ||||||| |||||| ||||||||| |||||||||||||
Sbjct: 518 tcatcactggtcggcgctcccatctccttctgccgctgatcatacatcatcttctc 463
to top
>gb|AC134822.19| Medicago truncatula clone mth2-15j20, complete sequence
          Length = 106152

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 103/128 (80%)
 Strand = Plus / Plus

                                                                         
Query: 356   catcatcttctccacagtttgcctagtctcaggatccagttcagaaagcttgctattctc 415
             ||||||||| || ||||| || | |||||||||||| || |||  ||| |||||  ||||
Sbjct: 39695 catcatcttttcaacagtctgtcgagtctcaggatcaaggtcaccaagtttgctgctctc 39754

                                                                         
Query: 416   tggttccaccttttgggtgtcaacttcagggtcacctttgatcacagatttccaccactc 475
              ||||| || |||||||||| || |||||| ||||| || |  | | |||||||||| ||
Sbjct: 39755 aggttcaactttttgggtgttaatttcaggatcacccttaacgagacatttccaccagtc 39814

                     
Query: 476   catttgat 483
             ||||||||
Sbjct: 39815 catttgat 39822
to top
>gb|AY328470.1| Drosophila melanogaster nuclear migration protein NudC mRNA, complete
            cds
          Length = 1218

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 327  agacccatctgcttctgacgctgatcaaacatcatcttctccac 370
            ||||||| || |||||| ||||||||| ||||||||||||||||
Sbjct: 1011 agacccaactccttctgtcgctgatcatacatcatcttctccac 968
to top
>ref|NM_140666.2| Drosophila melanogaster nudC CG9710-RA (nudC), mRNA
          Length = 1245

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 327  agacccatctgcttctgacgctgatcaaacatcatcttctccac 370
            ||||||| || |||||| ||||||||| ||||||||||||||||
Sbjct: 1028 agacccaactccttctgtcgctgatcatacatcatcttctccac 985
to top
>gb|AC010751.5| Drosophila melanogaster 3L BAC RP98-9A23 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 181437

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 327   agacccatctgcttctgacgctgatcaaacatcatcttctccac 370
             ||||||| || |||||| ||||||||| ||||||||||||||||
Sbjct: 98383 agacccaactccttctgtcgctgatcatacatcatcttctccac 98426
to top
>gb|AY071485.1| Drosophila melanogaster RE55422 full length cDNA
          Length = 1249

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 327  agacccatctgcttctgacgctgatcaaacatcatcttctccac 370
            ||||||| || |||||| ||||||||| ||||||||||||||||
Sbjct: 1028 agacccaactccttctgtcgctgatcatacatcatcttctccac 985
to top
>dbj|AK108973.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-E03, full
           insert sequence
          Length = 2057

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 73/88 (82%)
 Strand = Plus / Minus

                                                                       
Query: 338 cttctgacgctgatcaaacatcatcttctccacagtttgcctagtctcaggatccagttc 397
           |||||| ||||| |||||||||||||||||||| || || |  ||||| || ||||| ||
Sbjct: 931 cttctggcgctggtcaaacatcatcttctccaccgtctggcgtgtctctgggtccaggtc 872

                                       
Query: 398 agaaagcttgctattctctggttccacc 425
           ||  |||||||| ||||| || ||||||
Sbjct: 871 agtgagcttgctgttctccggctccacc 844
to top
>gb|AC006933.3|AC006933 Drosophila melanogaster, chromosome 3L, region 73B7-73D6, BAC clone
             BACR48E21, complete sequence
          Length = 186002

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 327   agacccatctgcttctgacgctgatcaaacatcatcttctccac 370
             ||||||| || |||||| ||||||||| ||||||||||||||||
Sbjct: 80875 agacccaactccttctgtcgctgatcatacatcatcttctccac 80918
to top
>emb|X52565.1|ANNMP A. nidulans gene for nuclear movement protein
          Length = 972

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 312 tcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatcttctc 367
           |||||||| ||||||   ||||||| |||||| ||||||||| |||||||||||||
Sbjct: 655 tcatcactggtcggcgctcccatctccttctgccgctgatcatacatcatcttctc 600
to top
>gb|AE003526.4| Drosophila melanogaster chromosome 3L, section 59 of 83 of the complete
              sequence
          Length = 281100

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 327    agacccatctgcttctgacgctgatcaaacatcatcttctccac 370
              ||||||| || |||||| ||||||||| ||||||||||||||||
Sbjct: 235219 agacccaactccttctgtcgctgatcatacatcatcttctccac 235176
to top
>emb|BX012330.1|CNS08HOE Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA19CD07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 215

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 255 aagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatttca 314
           ||||||||||| || |||||   ||||||||| || |||||||| ||||||| |   || 
Sbjct: 119 aagtccatctcgggatgctgtcccatgaactttttcagcatgtcctgcttcttctgctcg 178

                                              
Query: 315 tcacttgtcggcagacccatctgcttctgacgctg 349
           ||||| |||||||||||||||| ||| || |||||
Sbjct: 179 tcactcgtcggcagacccatctccttttgccgctg 213
to top
>gb|BC045909.1| Danio rerio nuclear distribution gene C homolog, mRNA (cDNA clone
            MGC:56099 IMAGE:5410957), complete cds
          Length = 1328

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 252  gagaagtccatctctgggtgctgagacatgaacttcttgagcatgtc 298
            ||||||||||||||||| || |||| |||||||||||| || |||||
Sbjct: 1086 gagaagtccatctctggatgttgagccatgaacttcttcaggatgtc 1040
to top
>ref|NM_200919.1| Danio rerio nuclear distribution gene C homolog (nudc), mRNA
          Length = 1328

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 252  gagaagtccatctctgggtgctgagacatgaacttcttgagcatgtc 298
            ||||||||||||||||| || |||| |||||||||||| || |||||
Sbjct: 1086 gagaagtccatctctggatgttgagccatgaacttcttcaggatgtc 1040
to top
>emb|X82445.1|RNRNUDC R.norvegicus C15 mRNA
          Length = 1294

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 252  gagaagtccatctctgggtgctgagacatgaacttctt 289
            ||||| ||||||||||||||||||  ||||||||||||
Sbjct: 1067 gagaaatccatctctgggtgctgatccatgaacttctt 1030
to top
>gb|BC065581.1| Rattus norvegicus nuclear distribution gene C homolog (Aspergillus),
            mRNA (cDNA clone MGC:72493 IMAGE:5623848), complete cds
          Length = 1370

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 252  gagaagtccatctctgggtgctgagacatgaacttctt 289
            ||||| ||||||||||||||||||  ||||||||||||
Sbjct: 1053 gagaaatccatctctgggtgctgatccatgaacttctt 1016
to top
>ref|NM_017271.1| Rattus norvegicus nuclear distribution gene C homolog (Aspergillus)
            (Nudc), mRNA
          Length = 1294

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 252  gagaagtccatctctgggtgctgagacatgaacttctt 289
            ||||| ||||||||||||||||||  ||||||||||||
Sbjct: 1067 gagaaatccatctctgggtgctgatccatgaacttctt 1030
to top
>ref|XM_802217.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508089.30) partial mRNA
          Length = 915

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 339 ttctgacgctgatcaaacatcatcttctccac 370
           ||||||||||||||  ||||||||||||||||
Sbjct: 809 ttctgacgctgatcgtacatcatcttctccac 778
to top
>ref|XM_810176.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508857.50) partial mRNA
          Length = 915

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 339 ttctgacgctgatcaaacatcatcttctccac 370
           ||||||||||||||  ||||||||||||||||
Sbjct: 809 ttctgacgctgatcgtacatcatcttctccac 778
to top
>ref|XM_662825.1| Cryptosporidium hominis TU502 nuclear distribution gene C
           (Chro.70486) partial mRNA
          Length = 924

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 347 ctgatcaaacatcatcttctccac 370
           ||||||||||||||||||||||||
Sbjct: 795 ctgatcaaacatcatcttctccac 772
to top
>ref|XM_628588.1| Cryptosporidium parvum Iowa II NudC ortholog (cgd7_4390), partial
           mRNA
          Length = 939

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 347 ctgatcaaacatcatcttctccac 370
           ||||||||||||||||||||||||
Sbjct: 810 ctgatcaaacatcatcttctccac 787
to top
>ref|XM_467748.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1518

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 434 gtcaacttcagggtcacctttgatcacagatttccacca 472
           ||||| ||||||||||||||| ||||| ||| |||||||
Sbjct: 980 gtcaagttcagggtcaccttttatcactgatgtccacca 942
to top
>ref|XM_506966.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1734_E02.21-2
            mRNA
          Length = 1335

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 434  gtcaacttcagggtcacctttgatcacagatttccacca 472
            ||||| ||||||||||||||| ||||| ||| |||||||
Sbjct: 1132 gtcaagttcagggtcaccttttatcactgatgtccacca 1170
to top
>ref|XM_590940.2| PREDICTED: Bos taurus similar to nuclear distribution gene C homolog
            (A. nidulans), transcript variant 1 (LOC513277), mRNA
          Length = 1315

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 255  aagtccatctctgggtgctgagacatgaacttctt 289
            |||||||||||||| ||||||  ||||||||||||
Sbjct: 1075 aagtccatctctggatgctgatccatgaacttctt 1041
to top
>ref|XM_878820.1| PREDICTED: Bos taurus similar to nuclear distribution gene C homolog
            (A. nidulans), transcript variant 5 (LOC513277), mRNA
          Length = 1329

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 255  aagtccatctctgggtgctgagacatgaacttctt 289
            |||||||||||||| ||||||  ||||||||||||
Sbjct: 1089 aagtccatctctggatgctgatccatgaacttctt 1055
to top
>ref|XM_878789.1| PREDICTED: Bos taurus similar to nuclear distribution gene C homolog
            (A. nidulans), transcript variant 4 (LOC513277), mRNA
          Length = 1311

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 255  aagtccatctctgggtgctgagacatgaacttctt 289
            |||||||||||||| ||||||  ||||||||||||
Sbjct: 1071 aagtccatctctggatgctgatccatgaacttctt 1037
to top
>ref|XM_878762.1| PREDICTED: Bos taurus similar to nuclear distribution gene C
           homolog (A. nidulans), transcript variant 3 (LOC513277),
           mRNA
          Length = 1227

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 255 aagtccatctctgggtgctgagacatgaacttctt 289
           |||||||||||||| ||||||  ||||||||||||
Sbjct: 987 aagtccatctctggatgctgatccatgaacttctt 953
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 434      gtcaacttcagggtcacctttgatcacagatttccacca 472
                ||||| ||||||||||||||| ||||| ||| |||||||
Sbjct: 31213529 gtcaagttcagggtcaccttttatcactgatgtccacca 31213567
to top
>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1734_E02
          Length = 168566

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 434   gtcaacttcagggtcacctttgatcacagatttccacca 472
             ||||| ||||||||||||||| ||||| ||| |||||||
Sbjct: 93372 gtcaagttcagggtcaccttttatcactgatgtccacca 93410
to top
>dbj|AK070302.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F13, full
            insert sequence
          Length = 1335

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 434  gtcaacttcagggtcacctttgatcacagatttccacca 472
            ||||| ||||||||||||||| ||||| ||| |||||||
Sbjct: 1132 gtcaagttcagggtcaccttttatcactgatgtccacca 1170
to top
>dbj|AK064134.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-G03, full
           insert sequence
          Length = 1518

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 434 gtcaacttcagggtcacctttgatcacagatttccacca 472
           ||||| ||||||||||||||| ||||| ||| |||||||
Sbjct: 980 gtcaagttcagggtcaccttttatcactgatgtccacca 942
to top
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 465     ttccaccactccatttgattgtgctt 490
               |||||||||||||||||||| |||||
Sbjct: 1140104 ttccaccactccatttgattttgctt 1140129
to top
>gb|AC159450.1| Trypanosoma brucei chromosome 7 clone RPCI93-5F10, complete sequence
          Length = 154291

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 465   ttccaccactccatttgattgtgctt 490
             |||||||||||||||||||| |||||
Sbjct: 30386 ttccaccactccatttgattttgctt 30361
to top
>ref|NM_006996.1| Homo sapiens solute carrier family 19 (thiamine transporter), member
            2 (SLC19A2), mRNA
          Length = 3668

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 171  aactaggatagatgtgattcct 192
            ||||||||||||||||||||||
Sbjct: 2782 aactaggatagatgtgattcct 2803
to top
>ref|NM_010948.1| Mus musculus nuclear distribution gene C homolog (Aspergillus)
            (Nudc), mRNA
          Length = 1302

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 252  gagaagtccatctctgggtgctgagacatgaacttctt 289
            ||||| |||||||||||||||||   ||||||||||||
Sbjct: 1059 gagaaatccatctctgggtgctggtccatgaacttctt 1022
to top
>ref|XM_753686.1| Ustilago maydis 521 hypothetical protein (UM02632.1) partial mRNA
          Length = 591

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 338 cttctgacgctgatcaaacatcatcttctc 367
           ||||||||| | ||||||||||||||||||
Sbjct: 471 cttctgacggttatcaaacatcatcttctc 442
to top
>ref|XM_819772.1| Trypanosoma brucei TREU927 clone RPCI93-5F10 hypothetical protein
           (Tb927.7.4290) partial mRNA
          Length = 894

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 465 ttccaccactccatttgattgtgctt 490
           |||||||||||||||||||| |||||
Sbjct: 662 ttccaccactccatttgattttgctt 637
to top
>emb|AJ238413.1|HSA238413 Homo sapiens TRMA gene for thiamine transporter (THTR-1 protein)
          Length = 23760

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 171   aactaggatagatgtgattcct 192
             ||||||||||||||||||||||
Sbjct: 22189 aactaggatagatgtgattcct 22210
to top
>gb|BC018514.1| Homo sapiens solute carrier family 19 (thiamine transporter), member
            2, mRNA (cDNA clone MGC:17044 IMAGE:3872233), complete
            cds
          Length = 2990

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 171  aactaggatagatgtgattcct 192
            ||||||||||||||||||||||
Sbjct: 2107 aactaggatagatgtgattcct 2128
to top
>emb|AL021068.2|HS206D15 Human DNA sequence from clone RP1-206D15 on chromosome 1q24 Contains
             the 3' end of the BLZF1 gene for basic leucine zipper
             nuclear factor 1 (JEM-1), the gene for a novel protein
             (FLJ25846), a novel gene, the SLC19A2 gene for solute
             carrier family 19 (thiamine transporter) member 2, an ATP
             synthase 6 (MTATP6) pseudogene, and a CpG island, complete
             sequence
          Length = 101574

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 171   aactaggatagatgtgattcct 192
             ||||||||||||||||||||||
Sbjct: 22189 aactaggatagatgtgattcct 22210
to top
>ref|XM_963045.1| PREDICTED: Tribolium castaneum similar to Nuclear migration protein
           nudC (Nuclear distribution protein C homolog)
           (Silica-induced gene 92 protein) (SIG-92) (LOC656519),
           mRNA
          Length = 951

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 321 gtcggcagacccatctgcttctgacgctgatcaaacatcatcttctccac 370
           |||||||| |||| || |||||| | ||||||  ||||||||||||||||
Sbjct: 863 gtcggcagccccaactccttctgtctctgatcgtacatcatcttctccac 814
to top
>emb|Y15522.1|MMNUDC Mus musculus mRNA for MNUDC protein
          Length = 1005

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 252 gagaagtccatctctgggtgctgagacatgaacttctt 289
           ||||| |||||||||||||||||   ||||||||||||
Sbjct: 983 gagaaatccatctctgggtgctggtccatgaacttctt 946
to top
>emb|X81443.1|MMSIG92 M.musculus SIG-92 mRNA
          Length = 1302

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 252  gagaagtccatctctgggtgctgagacatgaacttctt 289
            ||||| |||||||||||||||||   ||||||||||||
Sbjct: 1059 gagaaatccatctctgggtgctggtccatgaacttctt 1022
to top
>gb|AC163090.5| Mus musculus chromosome 8, clone RP23-457I3, complete sequence
          Length = 195979

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 252   gagaagtccatctctgggtgctgagacatgaacttctt 289
             ||||| |||||||||||||||||   ||||||||||||
Sbjct: 19926 gagaaatccatctctgggtgctggtccatgaacttctt 19889
to top
>dbj|AK146323.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched
            library, clone:I730052K04 product:nuclear distribution
            gene C homolog (Aspergillus), full insert sequence
          Length = 1306

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 252  gagaagtccatctctgggtgctgagacatgaacttctt 289
            ||||| |||||||||||||||||   ||||||||||||
Sbjct: 1092 gagaaatccatctctgggtgctggtccatgaacttctt 1055
to top
>dbj|AK032673.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:6530413H12 product:nuclear
            distribution gene C homolog (Aspergillus), full insert
            sequence
          Length = 1303

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 252  gagaagtccatctctgggtgctgagacatgaacttctt 289
            ||||| |||||||||||||||||   ||||||||||||
Sbjct: 1079 gagaaatccatctctgggtgctggtccatgaacttctt 1042
to top
>ref|NR_001572.1| Mus musculus nuclear distribution gene C homolog (Aspergillus),
           pseudogene 1 (Nudc-ps1) on chromosome 8
          Length = 468

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 252 gagaagtccatctctgggtgctgagacatgaacttctt 289
           ||||| |||||||||||||||||   ||||||||||||
Sbjct: 313 gagaaatccatctctgggtgctggtccatgaacttctt 276
to top
>dbj|AK012777.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2810021G05 product:nuclear
            distribution gene C homolog (Aspergillus), full insert
            sequence
          Length = 1292

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 252  gagaagtccatctctgggtgctgagacatgaacttctt 289
            ||||| |||||||||||||||||   ||||||||||||
Sbjct: 1069 gagaaatccatctctgggtgctggtccatgaacttctt 1032
to top
>dbj|AK012321.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2700033I24 product:nuclear
            distribution gene C homolog (Aspergillus), full insert
            sequence
          Length = 1312

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 252  gagaagtccatctctgggtgctgagacatgaacttctt 289
            ||||| |||||||||||||||||   ||||||||||||
Sbjct: 1092 gagaaatccatctctgggtgctggtccatgaacttctt 1055
to top
>gb|AC069471.4|AC069471 Arabidopsis thaliana chromosome 1 BAC F13K9 genomic sequence, complete
             sequence
          Length = 126991

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 247   catttgagaagtccatctctgggtgctgagacatgaacttcttgagcatgtctt 300
             |||| |||||||||||| |  | ||||||| || ||||||||||||||| ||||
Sbjct: 40610 cattagagaagtccatcccatgatgctgagccaagaacttcttgagcatatctt 40557
to top
>dbj|AB020754.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYN8
          Length = 54528

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 275  agacatgaacttcttgagcatgtcttgcttctgcatttcatcacttgtcggcagacccat 334
            ||||||||| ||||| || || ||||||||||| |  || || ||||| || ||||||||
Sbjct: 4000 agacatgaatttcttaaggatctcttgcttctgtagctcctcgcttgttggaagacccat 3941

                  
Query: 335  ctgctt 340
            ||||||
Sbjct: 3940 ctgctt 3935



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 247  catttgagaagtccatctctgggtgctg 274
            ||||||||||||||||||| || |||||
Sbjct: 4130 catttgagaagtccatctccggatgctg 4103
to top
>emb|AJ237724.1|HSA237724 Homo sapiens mRNA for thiamine transporter (THTR-1), partial
          Length = 4126

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 171  aactaggatagatgtgattcct 192
            ||||||||||||||||||||||
Sbjct: 2555 aactaggatagatgtgattcct 2576
to top
>gb|AF160812.1|AF160812 Homo sapiens thiamine transporter 1 (THT1) mRNA, complete cds
          Length = 3530

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 171  aactaggatagatgtgattcct 192
            ||||||||||||||||||||||
Sbjct: 2641 aactaggatagatgtgattcct 2662
to top
>gb|AF135488.1|AF135488 Homo sapiens high affinity thiamine transporter mRNA, complete cds
          Length = 3572

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 171  aactaggatagatgtgattcct 192
            ||||||||||||||||||||||
Sbjct: 2705 aactaggatagatgtgattcct 2726
to top
>gb|AF153330.1|AF153330 Homo sapiens thiamine carrier 1 (TC1) mRNA, complete cds
          Length = 3668

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 171  aactaggatagatgtgattcct 192
            ||||||||||||||||||||||
Sbjct: 2782 aactaggatagatgtgattcct 2803
to top
>gb|AC124121.18| Mus musculus chromosome 8, clone RP23-169B14, complete sequence
          Length = 225779

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 252    gagaagtccatctctgggtgctgagacatgaacttctt 289
              ||||| |||||||||||||||||   ||||||||||||
Sbjct: 108023 gagaaatccatctctgggtgctggtccatgaacttctt 108060
to top
>gb|BC011253.1| Mus musculus nuclear distribution gene C homolog (Aspergillus), mRNA
            (cDNA clone MGC:19328 IMAGE:4207838), complete cds
          Length = 1291

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 252  gagaagtccatctctgggtgctgagacatgaacttctt 289
            ||||| |||||||||||||||||   ||||||||||||
Sbjct: 1057 gagaaatccatctctgggtgctggtccatgaacttctt 1020
to top
>dbj|AB209540.1| Homo sapiens mRNA for solute carrier family 19, member 2 variant
            protein
          Length = 3130

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 171  aactaggatagatgtgattcct 192
            ||||||||||||||||||||||
Sbjct: 2264 aactaggatagatgtgattcct 2285
to top
>gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, complete sequence
          Length = 198253

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 55     aagacattgtgtccttgagaa 75
              |||||||||||||||||||||
Sbjct: 147893 aagacattgtgtccttgagaa 147913
to top
>gb|AC119735.3| Homo sapiens 3 BAC RP11-78E9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 69953

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 194   cataaaaaactttctgcatttcctt 218
             ||||||||||||||||| |||||||
Sbjct: 23450 cataaaaaactttctgcctttcctt 23474
to top
>gb|DQ311385.1| Bombyx mori nuclear migration protein nudC mRNA, complete cds
          Length = 1359

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 90/113 (79%)
 Strand = Plus / Minus

                                                                        
Query: 252  gagaagtccatctctgggtgctgagacatgaacttcttgagcatgtcttgcttctgcatt 311
            ||||||||||||||||| |||||   |||||| |||||||| |  ||||| ||||    |
Sbjct: 1078 gagaagtccatctctggatgctgttccatgaatttcttgagtacttcttgtttcttttgt 1019

                                                                 
Query: 312  tcatcacttgtcggcagacccatctgcttctgacgctgatcaaacatcatctt 364
            ||||||||||| || || ||||| |  ||||| | ||||||  ||||||||||
Sbjct: 1018 tcatcacttgtaggtagtcccatttctttctgtctctgatcgtacatcatctt 966
to top
>emb|BX649203.1| Mouse DNA sequence from clone RP23-24C12 on chromosome 2, complete
             sequence
          Length = 37211

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 447   tcacctttgatcacagatttccacc 471
             |||||||| ||||||||||||||||
Sbjct: 27303 tcacctttaatcacagatttccacc 27279
to top
>emb|BX248403.6| Zebrafish DNA sequence from clone DKEY-30H14 in linkage group 20,
              complete sequence
          Length = 154669

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 275    agacatgaacttcttgagcatgtct 299
              |||||||||||| ||||||||||||
Sbjct: 136980 agacatgaacttattgagcatgtct 137004
to top
>gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, complete sequence
          Length = 192545

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 55     aagacattgtgtccttgagaa 75
              |||||||||||||||||||||
Sbjct: 113421 aagacattgtgtccttgagaa 113441
to top
>ref|XM_516208.1| PREDICTED: Pan troglodytes neural precursor cell expressed,
           developmentally down-regulated 5 (LOC460082), mRNA
          Length = 1170

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 735 caactgattggatccaaccacaga 712
to top
>ref|XM_324295.1| Neurospora crassa OR74A predicted protein (NCU04939.1) partial mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 423 accttttgggtgtcaacttc 442
           ||||||||||||||||||||
Sbjct: 35  accttttgggtgtcaacttc 54
to top
>ref|XM_954294.1| Neurospora crassa OR74A hypothetical protein (NCU04939.1) partial
           mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 423 accttttgggtgtcaacttc 442
           ||||||||||||||||||||
Sbjct: 35  accttttgggtgtcaacttc 54
to top
>gb|AC126433.3| Mus musculus BAC clone RP24-468I23 from chromosome 17, complete
             sequence
          Length = 165036

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    cattgtgtccttgagaagtc 78
             ||||||||||||||||||||
Sbjct: 14902 cattgtgtccttgagaagtc 14883
to top
>gb|AC117241.4| Mus musculus BAC clone RP24-147H15 from chromosome 17, complete sequence
          Length = 191713

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     cattgtgtccttgagaagtc 78
              ||||||||||||||||||||
Sbjct: 179338 cattgtgtccttgagaagtc 179319
to top
>ref|NM_004404.3| Homo sapiens septin 2 (SEPT2), transcript variant 4, mRNA
          Length = 3311

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 869 caactgattggatccaaccacaga 846
to top
>ref|NM_006155.1| Homo sapiens septin 2 (SEPT2), transcript variant 2, mRNA
          Length = 3497

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 10   caactgattggttccaaccacaga 33
            ||||||||||| ||||||||||||
Sbjct: 1055 caactgattggatccaaccacaga 1032
to top
>ref|NM_001008491.1| Homo sapiens septin 2 (SEPT2), transcript variant 1, mRNA
          Length = 3598

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 10   caactgattggttccaaccacaga 33
            ||||||||||| ||||||||||||
Sbjct: 1156 caactgattggatccaaccacaga 1133
to top
>ref|NM_001008492.1| Homo sapiens septin 2 (SEPT2), transcript variant 3, mRNA
          Length = 3396

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 954 caactgattggatccaaccacaga 931
to top
>gb|AC068909.31| Mus musculus BAC Clone 407f20 RPCI-23, complete sequence
          Length = 196383

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    ctagtctcaggatccagttc 397
              ||||||||||||||||||||
Sbjct: 109159 ctagtctcaggatccagttc 109140
to top
>gb|BC033559.1| Homo sapiens septin 2, mRNA (cDNA clone MGC:42401 IMAGE:4821654),
            complete cds
          Length = 1774

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 10   caactgattggttccaaccacaga 33
            ||||||||||| ||||||||||||
Sbjct: 1210 caactgattggatccaaccacaga 1187
to top
>emb|AL645532.16| Mouse DNA sequence from clone RP23-295E4 on chromosome 11 Contains two
             novel genes, the 3' end of the Egfr gene for epidermal
             growth factor receptor and the gene for a novel F-box
             domain containing protein, complete sequence
          Length = 161348

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   aaccagacactaaaccacaa 152
             ||||||||||||||||||||
Sbjct: 64822 aaccagacactaaaccacaa 64803
to top
>emb|CR859207.1| Pongo pygmaeus mRNA; cDNA DKFZp459B1331 (from clone DKFZp459B1331)
          Length = 4697

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 10   caactgattggttccaaccacaga 33
            ||||||||||| ||||||||||||
Sbjct: 2245 caactgattggatccaaccacaga 2222
to top
>gb|AC103819.3| Homo sapiens chromosome 8, clone CTD-3056O22, complete sequence
          Length = 148021

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   ctattctctggttccacctt 427
             ||||||||||||||||||||
Sbjct: 37707 ctattctctggttccacctt 37688
to top
>emb|CR860673.1| Pongo pygmaeus mRNA; cDNA DKFZp459F2415 (from clone DKFZp459F2415)
          Length = 3291

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 835 caactgattggatccaaccacaga 812
to top
>emb|CR860136.1| Pongo pygmaeus mRNA; cDNA DKFZp469J1819 (from clone DKFZp469J1819)
          Length = 2955

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 806 caactgattggatccaaccacaga 783
to top
>emb|CR859154.1| Pongo pygmaeus mRNA; cDNA DKFZp459I0429 (from clone DKFZp459I0429)
          Length = 3268

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 814 caactgattggatccaaccacaga 791
to top
>emb|CR857766.1| Pongo pygmaeus mRNA; cDNA DKFZp469E2428 (from clone DKFZp469E2428)
          Length = 3426

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 975 caactgattggatccaaccacaga 952
to top
>emb|CR847517.1| Human DNA sequence from clone XX-NCIH2171_9D08, complete sequence
          Length = 112973

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   ctattctctggttccacctt 427
             ||||||||||||||||||||
Sbjct: 29033 ctattctctggttccacctt 29052
to top
>gb|AC108925.8| Homo sapiens chromosome 8, clone RP11-1136L8, complete sequence
          Length = 159104

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    ctattctctggttccacctt 427
              ||||||||||||||||||||
Sbjct: 142525 ctattctctggttccacctt 142506
to top
>emb|CR625560.1| full-length cDNA clone CS0DI002YF22 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1730

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 792 caactgattggatccaaccacaga 769
to top
>emb|CR589975.1| full-length cDNA clone CS0DF034YE13 of Fetal brain of Homo sapiens
           (human)
          Length = 1769

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 840 caactgattggatccaaccacaga 817
to top
>gb|AC013602.4|AC013602 Homo sapiens, clone RP11-10C6, complete sequence
          Length = 152770

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   tgtcttgcttctgcatttca 314
             ||||||||||||||||||||
Sbjct: 34888 tgtcttgcttctgcatttca 34869
to top
>gb|AC103736.5| Homo sapiens chromosome 11, clone RP11-703E9, complete sequence
          Length = 147226

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   tgtcttgcttctgcatttca 314
             ||||||||||||||||||||
Sbjct: 39711 tgtcttgcttctgcatttca 39730
to top
>dbj|D28540.1|HUMDIFF6 Homo sapiens mRNA for Diff6, H5, CDC10 homologue, complete cds
          Length = 3241

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 797 caactgattggatccaaccacaga 774
to top
>gb|AC104841.6| Homo sapiens BAC clone RP11-475G3 from 2, complete sequence
          Length = 133221

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 10   caactgattggttccaaccacaga 33
            ||||||||||| ||||||||||||
Sbjct: 5839 caactgattggatccaaccacaga 5862
to top
>gb|AC103681.4| Homo sapiens chromosome 11, clone CTD-2560E9, complete sequence
          Length = 215485

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   tgtcttgcttctgcatttca 314
             ||||||||||||||||||||
Sbjct: 22341 tgtcttgcttctgcatttca 22322
to top
>emb|BX648000.1|HSM808146 Homo sapiens mRNA; cDNA DKFZp686E1159 (from clone DKFZp686E1159)
          Length = 3350

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 893 caactgattggatccaaccacaga 870
to top
>dbj|D63878.1| Homo sapiens mRNA for KIAA0158 gene, partial cds
          Length = 3433

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 993 caactgattggatccaaccacaga 970
to top
>gb|AY610051.1| Sus scrofa clone Clu_60320.scr.msk.p1.Contig1, mRNA sequence
          Length = 1345

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 258  tccatctctgggtgctgagacatgaacttctt 289
            ||||||||||| ||||||  ||||||||||||
Sbjct: 1080 tccatctctggatgctgatccatgaacttctt 1049
to top
>gb|AF038404.1|AF038404 Homo sapiens homolog of Nedd5 (hNedd5) mRNA, complete cds
          Length = 3258

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  caactgattggttccaaccacaga 33
           ||||||||||| ||||||||||||
Sbjct: 813 caactgattggatccaaccacaga 790
to top
>gb|AC068908.21| Mus musculus BAC Clone 389o18 RPCI-23, complete sequence
          Length = 198576

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   ctagtctcaggatccagttc 397
             ||||||||||||||||||||
Sbjct: 41784 ctagtctcaggatccagttc 41765
to top
>gb|BC014455.1| Homo sapiens septin 2, transcript variant 1, mRNA (cDNA clone
            MGC:23048 IMAGE:4906575), complete cds
          Length = 2147

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 10   caactgattggttccaaccacaga 33
            ||||||||||| ||||||||||||
Sbjct: 1156 caactgattggatccaaccacaga 1133
to top
>gb|AF315312.2| Homo sapiens chromosome 8 clone RP1-80K22 map 8q24.3, complete sequence
          Length = 149172

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    ctattctctggttccacctt 427
              ||||||||||||||||||||
Sbjct: 117242 ctattctctggttccacctt 117261


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,247,567
Number of Sequences: 3902068
Number of extensions: 5247567
Number of successful extensions: 98651
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98337
Number of HSP's gapped (non-prelim): 304
length of query: 491
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 469
effective length of database: 17,147,199,772
effective search space: 8042036693068
effective search space used: 8042036693068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top