Clone Name | rbart34b04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | EURL_MOUSE (Q9D7G4) Protein EURL homolog | 30 | 2.3 | 2 | GPA6_CAEEL (Q93743) Guanine nucleotide-binding protein alpha-6 s... | 29 | 3.9 | 3 | SYV_THETH (P96142) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... | 28 | 8.8 | 4 | SYV_THET8 (Q5SJ45) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... | 28 | 8.8 | 5 | SYV_THET2 (Q72JG7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... | 28 | 8.8 |
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>EURL_MOUSE (Q9D7G4) Protein EURL homolog| Length = 290 Score = 29.6 bits (65), Expect = 2.3 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +1 Query: 7 KANWSFIYSMEKLLQLPTQCNKPSRHAL 90 K NW Y+ K L L ++C+K S+H L Sbjct: 93 KINWIVQYAQNKNLDLESECSKTSQHPL 120
>GPA6_CAEEL (Q93743) Guanine nucleotide-binding protein alpha-6 subunit| Length = 364 Score = 28.9 bits (63), Expect = 3.9 Identities = 18/38 (47%), Positives = 22/38 (57%) Frame = +1 Query: 22 FIYSMEKLLQLPTQCNKPSRHALKQQESIFKTWMHLDL 135 FI SM QL + NK +R +KQ IFKT +H DL Sbjct: 234 FIVSMSDYDQLDPEDNKYNR--MKQSYEIFKTIVHSDL 269
>SYV_THETH (P96142) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 27.7 bits (60), Expect = 8.8 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +1 Query: 37 EKLLQLPTQCNKPSRHALKQQESIFKTW 120 E+ L+ PT C LK+ E +F TW Sbjct: 429 ERYLEDPTSCEACGSPRLKRDEDVFDTW 456
>SYV_THET8 (Q5SJ45) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 27.7 bits (60), Expect = 8.8 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +1 Query: 37 EKLLQLPTQCNKPSRHALKQQESIFKTW 120 E+ L+ PT C LK+ E +F TW Sbjct: 429 ERYLEDPTSCEACGSPRLKRDEDVFDTW 456
>SYV_THET2 (Q72JG7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 27.7 bits (60), Expect = 8.8 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +1 Query: 37 EKLLQLPTQCNKPSRHALKQQESIFKTW 120 E+ L+ PT C LK+ E +F TW Sbjct: 429 ERYLEDPTSCEACGSPRLKRDEDVFDTW 456 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,299,479 Number of Sequences: 219361 Number of extensions: 349656 Number of successful extensions: 866 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 855 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 866 length of database: 80,573,946 effective HSP length: 35 effective length of database: 72,896,311 effective search space used: 1749511464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)