>PDIA6_MEDSA (P38661) Probable protein disulfide-isomerase A6 precursor (EC|
           5.3.4.1) (P5)
          Length = 364

 Score = 79.0 bits (193), Expect = 6e-15
 Identities = 37/56 (66%), Positives = 46/56 (82%)
 Frame = -1

Query: 477 AVKHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKSISPSKADEFAIKKNILSAF 310
           A ++GKIY+ V+KK L+KGSDY K E +RL RLLEKSISP+KADE  +KKNILS +
Sbjct: 308 ASRYGKIYLKVSKKYLEKGSDYAKNEIQRLERLLEKSISPAKADELTLKKNILSTY 363

>PDIA6_ARATH (O22263) Probable protein disulfide-isomerase A6 precursor (EC|
           5.3.4.1) (P5)
          Length = 361

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 32/54 (59%), Positives = 43/54 (79%)
 Frame = -1

Query: 471 KHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKSISPSKADEFAIKKNILSAF 310
           ++GK+Y+ +AK  ++KGSDY  KETERL R+L KSISP KADE  +K+NIL+ F
Sbjct: 304 RYGKLYLKLAKSYIEKGSDYASKETERLGRVLGKSISPVKADELTLKRNILTTF 357

>ERP29_MOUSE (P57759) Endoplasmic reticulum protein ERp29 precursor|
          Length = 262

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 19/49 (38%), Positives = 29/49 (59%)
 Frame = -1

Query: 456 YVNVAKKILQKGSDYTKKETERLHRLLEKSISPSKADEFAIKKNILSAF 310
           Y+ +  KIL +G D+   E  R+ +L+E  +S SK +E     NIL+AF
Sbjct: 204 YLKIMGKILDQGEDFPASEMARIGKLIENKMSDSKKEELQKSLNILTAF 252

>ERP29_RAT (P52555) Endoplasmic reticulum protein ERp29 precursor (ERp31)|
          Length = 260

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = -1

Query: 456 YVNVAKKILQKGSDYTKKETERLHRLLEKSISPSKADEFAIKKNILSAF 310
           Y+ +  KIL +G D+   E  R+ +L+E  +S  K +E     NIL+AF
Sbjct: 202 YLKIMGKILDQGEDFPASELARISKLIENKMSEGKKEELQRSLNILTAF 250

>ERP29_HUMAN (P30040) Endoplasmic reticulum protein ERp29 precursor (ERp31)|
           (ERp28)
          Length = 261

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = -1

Query: 471 KHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKS-ISPSKADEFAIKKNILSAF 310
           K  + Y+ +  KIL +G D+   E  R+ RL+EK+ +S  K +E     NIL+AF
Sbjct: 197 KWAEQYLKIMGKILDQGEDFPASEMTRIARLIEKNKMSDGKKEELQKSLNILTAF 251

>ERP38_NEUCR (Q92249) Protein disulfide-isomerase erp38 precursor (EC 5.3.4.1)|
           (ERp38)
          Length = 369

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -1

Query: 474 VKHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKS-ISPSKADEFAIKKNILSAF 310
           +K+   Y+ V  K L K   Y  KE  RL  +L+K  ++P+K DE  +K N+L  F
Sbjct: 303 LKYADYYLRVLDK-LSKSEGYATKEFARLEGILKKGGLAPAKVDELTVKVNVLRKF 357

>TIGA_ASPNG (Q00216) Protein disulfide-isomerase tigA precursor (EC 5.3.4.1)|
          Length = 359

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 471 KHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKSIS-PSKADEFAIKKNILSAF 310
           K+ + YV VA K L + ++Y  KE  RL ++L K  S P K D+   + NIL  F
Sbjct: 295 KYAQYYVKVADK-LSQNAEYAAKELARLEKILAKGGSAPEKVDDLISRSNILRKF 348

>PDI2_SCHPO (O13811) Protein disulfide-isomerase C17H9.14c precursor (EC|
           5.3.4.1)
          Length = 359

 Score = 36.6 bits (83), Expect = 0.034
 Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = -1

Query: 462 KIYVNVAKKILQKGSDYTKKETERLHRLL-EKSISPSKADEFAIKKNILSAF 310
           K Y  V +KIL    ++  KE +RL +LL +KSI+ + AD+F  + NIL++F
Sbjct: 304 KYYKKVFEKILND-ENWVHKEAKRLSKLLRQKSIALASADDFKTRLNILNSF 354

>ZN544_HUMAN (Q6NX49) Zinc finger protein 544|
          Length = 715

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
 Frame = -3

Query: 451 ERCKEDIAEGL*LYKEGN*EAPSLV-GEVDQSFQSR*IRHQEEHSFSFLLL 302
           +R +E+++  + +Y+ G  E PSLV G+V    QS  +R  +E+S  F++L
Sbjct: 97  DRAREELSHHVEVYRSGPEEPPSLVLGKVQD--QSNQLREHQENSLRFMVL 145

>PRIA_CHLTR (O84783) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase|
           priA) (Replication factor Y)
          Length = 753

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -1

Query: 432 LQKGSDYTKKETERLHRLLEKSI 364
           L K SDYT KET+R+H L+++++
Sbjct: 666 LGKCSDYTLKETQRVHTLIKQNL 688

>ERP29_CHICK (P81628) Endoplasmic reticulum protein ERp29 (Fragment)|
          Length = 228

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -1

Query: 471 KHGKIYVNVAKKILQKGSDYTKKETERLHRLLEKS 367
           K  + Y+ +  KIL++G ++   E  R+ +L+EK+
Sbjct: 188 KSAEQYLKIMSKILEQGEEFAANEVVRITKLIEKT 222

>GDA5_WHEAT (P04725) Alpha/beta-gliadin A-V precursor (Prolamin)|
          Length = 319

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 18/70 (25%), Positives = 32/70 (45%)
 Frame = -2

Query: 413 IQRRKLRGSIACWRSRSVLPKPMNSPSRRTFFQLSPLNGDDPRAPALPLGCSQ*CNSHLP 234
           +Q+++  G    +  +   P+P   PS++ + QL P     P  P LP    Q   S  P
Sbjct: 45  VQQQQFPGQQQQFPPQQPYPQPQPFPSQQPYLQLQPFPQPQPFPPQLPYPQPQ---SFPP 101

Query: 233 QERSEERQKE 204
           Q+   ++Q +
Sbjct: 102 QQPYPQQQPQ 111

>DGK2_DROME (Q09103) Eye-specific diacylglycerol kinase (EC 2.7.1.107) (Retinal|
           degeneration A protein) (Diglyceride kinase 2) (DGK 2)
           (DAG kinase 2)
          Length = 1457

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 365 SVLPKPMNSPSRRTFFQLSPLNGDDPRAPALPL 267
           ++LP    +P   TF  LSP NGD P  P LPL
Sbjct: 331 TLLPPQPTTPCGITF-TLSPTNGDYPSPPHLPL 362

>STU1_YEAST (P38198) Mitotic spindle protein STU1|
          Length = 1513

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -1

Query: 438  KILQKGSDYTKKETERLHRLLEKSI 364
            ++LQ   DYT++ETERL   L K++
Sbjct: 1478 RVLQTTPDYTEQETERLFDCLPKNV 1502


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,501,990
Number of Sequences: 219361
Number of extensions: 1217981
Number of successful extensions: 3998
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3998
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)