ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart33h12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
4emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb... 86 1e-13
5emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 i... 44 0.39
6gb|AC155264.2| Mus musculus BAC clone RP23-281B4 from chromosome... 42 1.6
7ref|XM_651503.1| Entamoeba histolytica HM-1:IMSS protein kinase ... 42 1.6
8gb|AC007488.15| Homo sapiens 3q27 BAC RP11-246B7 (Roswell Park C... 42 1.6
9gb|AC016711.9| Homo sapiens BAC clone RP11-249O24 from 2, comple... 42 1.6
10gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 42 1.6
11gb|AC007690.12| Homo sapiens 3 BAC RP11-42D20 (Roswell Park Canc... 42 1.6
12gb|AC009306.5| Homo sapiens BAC clone RP11-290K24 from 2, comple... 42 1.6
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.1
14emb|BX664743.23| Zebrafish DNA sequence from clone DKEY-11D20 in... 40 6.1
15gb|AC138342.11| Mus musculus chromosome 12, clone RP23-37C23, co... 40 6.1
16gb|AC099998.15| Mus musculus chromosome 17, clone RP23-27C1, com... 40 6.1
17emb|AL139343.9| Human DNA sequence from clone RP5-1078M7 on chro... 40 6.1
18emb|AL050403.16|HSDJ697P8 Human DNA sequence from clone RP4-697P... 40 6.1
19emb|BX470086.9| Zebrafish DNA sequence from clone CH211-117C19 i... 40 6.1
20gb|AC007120.6| Arabidopsis thaliana chromosome 2 clone T15D9 map... 40 6.1
21gb|AC093656.4| Homo sapiens BAC clone RP11-440N4 from 4, complet... 40 6.1
22gb|AC097519.2| Homo sapiens BAC clone RP11-549K7 from 4, complet... 40 6.1
23gb|AC092812.2| Homo sapiens chromosome 1 clone RP11-536F12, comp... 40 6.1
24dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
25gb|AC024937.21| Homo sapiens 3 BAC RP11-480A16 (Roswell Park Can... 40 6.1
26gb|AC113430.2| Homo sapiens chromosome 5 clone RP11-811I15, comp... 40 6.1
27gb|AC018735.12| Homo sapiens BAC clone RP11-372A6 from 2, comple... 40 6.1
28gb|AC092619.3| Homo sapiens BAC clone RP11-225M4 from 2, complet... 40 6.1
29gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
30gb|AC097642.3| Homo sapiens cosmid clone XXcos-2052C22 from 2, c... 40 6.1
31gb|AC104056.5| Homo sapiens cosmid clone XXcos-2052C14 from 2, c... 40 6.1
32gb|AC103913.3| Homo sapiens cosmid clone XXcos-2052C4 from 2, co... 40 6.1
33emb|BX005065.10| Zebrafish DNA sequence from clone CH211-163B2 i... 40 6.1
34emb|BX088583.12| Zebrafish DNA sequence from clone CH211-211K8 i... 40 6.1
35emb|CR936401.6| Zebrafish DNA sequence from clone CH73-348K23 in... 40 6.1
36emb|BX901876.11| Zebrafish DNA sequence from clone CH211-140G2 i... 40 6.1
37emb|BX927136.11| Zebrafish DNA sequence from clone DKEY-98O11 in... 40 6.1
38dbj|AP006312.2| Homo sapiens genomic DNA, chromosome Un clone:CM... 40 6.1
39dbj|AP006257.1| Homo sapiens genomic DNA, chromosome Un, clone:C... 40 6.1
40emb|CR396594.10| Zebrafish DNA sequence from clone CH211-158B12 ... 40 6.1 
>dbj|AK071593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103G12, full
            insert sequence
          Length = 1564

 Score =  111 bits (56), Expect = 2e-21
 Identities = 107/124 (86%)
 Strand = Plus / Minus

                                                                        
Query: 323  actagatagcggacattccagcgagttcgcgcagcttctcgcacgcgacgaaagtgattg 382
            |||| ||||| | |||||| |||||||| || |||||||| ||| | ||||| |||||||
Sbjct: 1234 actaaatagcagtcattcctgcgagttcacgaagcttctcacacacaacgaaggtgattg 1175

                                                                        
Query: 383  ctgtttgagggcctaaccttgcgaaggtggcaaacccacctttataaagtgattttacac 442
            |||| ||||| ||||| ||||| |||||||||||||||||||||||||| ||  ||||||
Sbjct: 1174 ctgtctgaggacctaatcttgcaaaggtggcaaacccacctttataaagcgacgttacac 1115

                
Query: 443  cctc 446
            ||||
Sbjct: 1114 cctc 1111
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Plus

                                                                            
Query: 323      actagatagcggacattccagcgagttcgcgcagcttctcgcacgcgacgaaagtgattg 382
                |||| ||||| | |||||| |||||||| || |||||||| ||| | ||||| |||||||
Sbjct: 21262020 actaaatagcagtcattcctgcgagttcacgaagcttctcacacacaacgaaggtgattg 21262079

                                                       
Query: 383      ctgtttgagggcctaaccttgcgaaggtggcaaacccac 421
                |||| ||||| ||||| ||||| ||||||||||||||||
Sbjct: 21262080 ctgtctgaggacctaatcttgcaaaggtggcaaacccac 21262118
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Plus

                                                                            
Query: 323      actagatagcggacattccagcgagttcgcgcagcttctcgcacgcgacgaaagtgattg 382
                |||| ||||| | |||||| |||||||| || |||||||| ||| | ||||| |||||||
Sbjct: 21188229 actaaatagcagtcattcctgcgagttcacgaagcttctcacacacaacgaaggtgattg 21188288

                                                       
Query: 383      ctgtttgagggcctaaccttgcgaaggtggcaaacccac 421
                |||| ||||| ||||| ||||| ||||||||||||||||
Sbjct: 21188289 ctgtctgaggacctaatcttgcaaaggtggcaaacccac 21188327
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>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137571

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                         
Query: 323   actagatagcggacattccagcgagttcgcgcagcttctcgcacgcgacgaaagtgattg 382
             |||| ||||| | |||||| |||||||| || |||||||| ||| | ||||| |||||||
Sbjct: 28180 actaaatagcagtcattcctgcgagttcacgaagcttctcacacacaacgaaggtgattg 28121

                                                    
Query: 383   ctgtttgagggcctaaccttgcgaaggtggcaaacccac 421
             |||| ||||| ||||| ||||| ||||||||||||||||
Sbjct: 28120 ctgtctgaggacctaatcttgcaaaggtggcaaacccac 28082
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>emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 in linkage group 9,
             complete sequence
          Length = 201771

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 48    aaacaatgcgaagctcaggctgaaaa 73
             ||||||||| ||||||||||||||||
Sbjct: 50295 aaacaatgctaagctcaggctgaaaa 50270
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>gb|AC155264.2| Mus musculus BAC clone RP23-281B4 from chromosome 16, complete sequence
          Length = 199531

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 180   aatttctttatcctttcaaaagtca 204
             ||||||||||| |||||||||||||
Sbjct: 96802 aatttctttatgctttcaaaagtca 96778
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>ref|XM_651503.1| Entamoeba histolytica HM-1:IMSS protein kinase (10.t00040)  partial
            mRNA
          Length = 5754

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 37   ctgaagaaaataaacaatgcg 57
            |||||||||||||||||||||
Sbjct: 2435 ctgaagaaaataaacaatgcg 2455
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>gb|AC007488.15| Homo sapiens 3q27 BAC RP11-246B7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 146443

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     tgaaaatcaaaaatggagagt 88
              |||||||||||||||||||||
Sbjct: 141704 tgaaaatcaaaaatggagagt 141684
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>gb|AC016711.9| Homo sapiens BAC clone RP11-249O24 from 2, complete sequence
          Length = 122880

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 176    gcccaatttctttatcctttc 196
              |||||||||||||||||||||
Sbjct: 105028 gcccaatttctttatcctttc 105048
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 344     cgagttcgcgcagcttctcgc 364
               |||||||||||||||||||||
Sbjct: 2739858 cgagttcgcgcagcttctcgc 2739838
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>gb|AC007690.12| Homo sapiens 3 BAC RP11-42D20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181531

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     tgaaaatcaaaaatggagagt 88
              |||||||||||||||||||||
Sbjct: 141629 tgaaaatcaaaaatggagagt 141649
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>gb|AC009306.5| Homo sapiens BAC clone RP11-290K24 from 2, complete sequence
          Length = 176602

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 250   taaatgaatggagtaaaatat 270
             |||||||||||||||||||||
Sbjct: 62198 taaatgaatggagtaaaatat 62218
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 179     caatttctttatcctttcaa 198
               ||||||||||||||||||||
Sbjct: 1296093 caatttctttatcctttcaa 1296074
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>emb|BX664743.23| Zebrafish DNA sequence from clone DKEY-11D20 in linkage group 22,
             complete sequence
          Length = 180012

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 174   cagcccaatttctttatcctttca 197
             ||||||| ||||||||||||||||
Sbjct: 62032 cagcccattttctttatcctttca 62009
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>gb|AC138342.11| Mus musculus chromosome 12, clone RP23-37C23, complete sequence
          Length = 208939

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aaaatcaccatctggatgga 24
             ||||||||||||||||||||
Sbjct: 79606 aaaatcaccatctggatgga 79625
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>gb|AC099998.15| Mus musculus chromosome 17, clone RP23-27C1, complete sequence
          Length = 134805

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 10    caccatctggatggaaaattgcaa 33
             |||||||||||||||||| |||||
Sbjct: 51908 caccatctggatggaaaaatgcaa 51885
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>emb|AL139343.9| Human DNA sequence from clone RP5-1078M7 on chromosome 1p32.1-32.3
            Contains the 5' end of a novel gene, complete sequence
          Length = 144818

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 237  ggaaaactgctgataaatga 256
            ||||||||||||||||||||
Sbjct: 6117 ggaaaactgctgataaatga 6098
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>emb|AL050403.16|HSDJ697P8 Human DNA sequence from clone RP4-697P8 on chromosome 20 Contains two
             novel genes and the FAT1P1 gene for FAT tumour suppressor
             homolog 1 (Drosophila) pseudogene 1, complete sequence
          Length = 144924

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 58    aagctcaggctgaaaatcaaaaat 81
             ||||||||||||||||| ||||||
Sbjct: 24811 aagctcaggctgaaaatgaaaaat 24788
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>emb|BX470086.9| Zebrafish DNA sequence from clone CH211-117C19 in linkage group 5,
             complete sequence
          Length = 190665

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 26    aattgcaatgtctgaagaaaataaacaa 53
             |||| |||| ||||||||||||||||||
Sbjct: 14197 aattacaatttctgaagaaaataaacaa 14224
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>gb|AC007120.6| Arabidopsis thaliana chromosome 2 clone T15D9 map mi421, complete
             sequence
          Length = 102331

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aagctcaggctgaaaatcaa 77
             ||||||||||||||||||||
Sbjct: 30320 aagctcaggctgaaaatcaa 30339
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>gb|AC093656.4| Homo sapiens BAC clone RP11-440N4 from 4, complete sequence
          Length = 152326

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     caggctgaaaatcaaaaatg 82
              ||||||||||||||||||||
Sbjct: 115860 caggctgaaaatcaaaaatg 115879
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>gb|AC097519.2| Homo sapiens BAC clone RP11-549K7 from 4, complete sequence
          Length = 185556

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     caggctgaaaatcaaaaatg 82
              ||||||||||||||||||||
Sbjct: 182131 caggctgaaaatcaaaaatg 182150
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>gb|AC092812.2| Homo sapiens chromosome 1 clone RP11-536F12, complete sequence
          Length = 160903

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    tttctttatcctttcaaaag 201
              ||||||||||||||||||||
Sbjct: 123981 tttctttatcctttcaaaag 124000
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 179     caatttctttatcctttcaa 198
               ||||||||||||||||||||
Sbjct: 1296091 caatttctttatcctttcaa 1296072
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>gb|AC024937.21| Homo sapiens 3 BAC RP11-480A16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 157198

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    caatgtctgaagaaaataaa 50
             ||||||||||||||||||||
Sbjct: 69501 caatgtctgaagaaaataaa 69520
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>gb|AC113430.2| Homo sapiens chromosome 5 clone RP11-811I15, complete sequence
          Length = 82406

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    caatgtctgaagaaaataaa 50
             ||||||||||||||||||||
Sbjct: 15661 caatgtctgaagaaaataaa 15680
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>gb|AC018735.12| Homo sapiens BAC clone RP11-372A6 from 2, complete sequence
          Length = 208924

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aaaaatcaccatctggatgg 23
             ||||||||||||||||||||
Sbjct: 20733 aaaaatcaccatctggatgg 20714
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>gb|AC092619.3| Homo sapiens BAC clone RP11-225M4 from 2, complete sequence
          Length = 163475

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ctgaagaaaataaacaatgc 56
             ||||||||||||||||||||
Sbjct: 15970 ctgaagaaaataaacaatgc 15951
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>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12,
              complete sequence
          Length = 146241

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    caatttctttatcctttcaa 198
              ||||||||||||||||||||
Sbjct: 100995 caatttctttatcctttcaa 100976
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>gb|AC097642.3| Homo sapiens cosmid clone XXcos-2052C22 from 2, complete sequence
          Length = 44838

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   caatgtctgaagaaaataaa 50
            ||||||||||||||||||||
Sbjct: 9552 caatgtctgaagaaaataaa 9571
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>gb|AC104056.5| Homo sapiens cosmid clone XXcos-2052C14 from 2, complete sequence
          Length = 36883

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    caatgtctgaagaaaataaa 50
             ||||||||||||||||||||
Sbjct: 16902 caatgtctgaagaaaataaa 16921
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>gb|AC103913.3| Homo sapiens cosmid clone XXcos-2052C4 from 2, complete sequence
          Length = 36816

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    caatgtctgaagaaaataaa 50
             ||||||||||||||||||||
Sbjct: 15029 caatgtctgaagaaaataaa 15048
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>emb|BX005065.10| Zebrafish DNA sequence from clone CH211-163B2 in linkage group 8,
             complete sequence
          Length = 175016

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 172   agcagcccaatttctttatccttt 195
             ||||||||||||| ||||||||||
Sbjct: 85241 agcagcccaatttatttatccttt 85264
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>emb|BX088583.12| Zebrafish DNA sequence from clone CH211-211K8 in linkage group 22,
             complete sequence
          Length = 202012

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 174   cagcccaatttctttatcctttca 197
             ||||||| ||||||||||||||||
Sbjct: 91865 cagcccattttctttatcctttca 91888
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>emb|CR936401.6| Zebrafish DNA sequence from clone CH73-348K23 in linkage group 22,
             complete sequence
          Length = 119387

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 174   cagcccaatttctttatcctttca 197
             ||||||| ||||||||||||||||
Sbjct: 20860 cagcccattttctttatcctttca 20837
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>emb|BX901876.11| Zebrafish DNA sequence from clone CH211-140G2 in linkage group 18,
              complete sequence
          Length = 155813

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     agtattattctgtccttgct 113
              ||||||||||||||||||||
Sbjct: 139400 agtattattctgtccttgct 139419
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>emb|BX927136.11| Zebrafish DNA sequence from clone DKEY-98O11 in linkage group 18,
             complete sequence
          Length = 93818

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    agtattattctgtccttgct 113
             ||||||||||||||||||||
Sbjct: 68411 agtattattctgtccttgct 68430
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>dbj|AP006312.2| Homo sapiens genomic DNA, chromosome Un clone:CMC5-245B5, telomere
            region, complete sequence
          Length = 29602

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   caatgtctgaagaaaataaa 50
            ||||||||||||||||||||
Sbjct: 7388 caatgtctgaagaaaataaa 7369
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>dbj|AP006257.1| Homo sapiens genomic DNA, chromosome Un, clone:CMC-251D12, Telomere
             region, complete sequence
          Length = 39954

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    caatgtctgaagaaaataaa 50
             ||||||||||||||||||||
Sbjct: 17030 caatgtctgaagaaaataaa 17011
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>emb|CR396594.10| Zebrafish DNA sequence from clone CH211-158B12 in linkage group 3,
             complete sequence
          Length = 48245

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    gaaaatcaaaaatggagagt 88
             ||||||||||||||||||||
Sbjct: 30519 gaaaatcaaaaatggagagt 30500


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,991,406
Number of Sequences: 3902068
Number of extensions: 4991406
Number of successful extensions: 95739
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95534
Number of HSP's gapped (non-prelim): 205
length of query: 455
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 433
effective length of database: 17,147,199,772
effective search space: 7424737501276
effective search space used: 7424737501276
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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