>gb|AY677179.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS3) mRNA, complete
            cds
          Length = 1576

 Score =  416 bits (210), Expect = e-113
 Identities = 216/218 (99%)
 Strand = Plus / Minus

                                                                        
Query: 15   atattcccccgggttcattcattcattcccggtatccctgctgttactgtcactcacacg 74
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1479 atattcccccggtttcattcattcattcccggtatccctgctgttactgtcactcacacg 1420

                                                                        
Query: 75   ttccttctcctcccccctcaacaaatcctacataacaaagacgagacacgaacggaatgg 134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 ttccttctcctcccccctcaacaaatcctacataacaaagacgagacacgaacggaatgg 1360

                                                                        
Query: 135  agatggaggacgacgggacgactactcggcgccgtcgggttgctgctgcttctggtcgcc 194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 agatggaggacgacgggacgactactcggcgccgtcgggttgctgctgcttctggtcgcc 1300

                                                  
Query: 195  gaagatgcgggtgcggaagtcctggaccatgaacggga 232
            |||||||||||||||||||||||||||||||| |||||
Sbjct: 1299 gaagatgcgggtgcggaagtcctggaccatgagcggga 1262

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                   
Query: 182      gcttctggtcgccgaagatgcgggtgcggaagtcctggaccatgaacggga 232
                |||| ||||||||||||||||||  |||||||||||||||||||| |||||
Sbjct: 28443989 gcttgtggtcgccgaagatgcggtcgcggaagtcctggaccatgagcggga 28443939

>dbj|AB183706.1| Oryza sativa (japonica cultivar-group) UXS-6 mRNA for UDP-glucuronic
            acid decarboxylase, complete cds
          Length = 1498

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 182  gcttctggtcgccgaagatgcgggtgcggaagtcctggaccatgaacggga 232
            |||| ||||||||||||||||||  |||||||||||||||||||| |||||
Sbjct: 1374 gcttgtggtcgccgaagatgcggtcgcggaagtcctggaccatgagcggga 1324

>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0037D09
          Length = 140470

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 182  gcttctggtcgccgaagatgcgggtgcggaagtcctggaccatgaacggga 232
            |||| ||||||||||||||||||  |||||||||||||||||||| |||||
Sbjct: 9741 gcttgtggtcgccgaagatgcggtcgcggaagtcctggaccatgagcggga 9691

>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0618H09
          Length = 142306

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 182  gcttctggtcgccgaagatgcgggtgcggaagtcctggaccatgaacggga 232
            |||| ||||||||||||||||||  |||||||||||||||||||| |||||
Sbjct: 1530 gcttgtggtcgccgaagatgcggtcgcggaagtcctggaccatgagcggga 1480

>dbj|AK103728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138E11, full
            insert sequence
          Length = 2031

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 182  gcttctggtcgccgaagatgcgggtgcggaagtcctggaccatgaacggga 232
            |||| ||||||||||||||||||  |||||||||||||||||||| |||||
Sbjct: 1682 gcttgtggtcgccgaagatgcggtcgcggaagtcctggaccatgagcggga 1632

>dbj|AK099614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050E02, full
            insert sequence
          Length = 1965

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 182  gcttctggtcgccgaagatgcgggtgcggaagtcctggaccatgaacggga 232
            |||| ||||||||||||||||||  |||||||||||||||||||| |||||
Sbjct: 1513 gcttgtggtcgccgaagatgcggtcgcggaagtcctggaccatgagcggga 1463

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 86       cccccctcaacaaatcctacat 107
                ||||||||||||||||||||||
Sbjct: 12333732 cccccctcaacaaatcctacat 12333753

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 86       cccccctcaacaaatcctacat 107
                ||||||||||||||||||||||
Sbjct: 12330495 cccccctcaacaaatcctacat 12330516

>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0029K10, from chromosome 3, complete sequence
          Length = 135940

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 86     cccccctcaacaaatcctacat 107
              ||||||||||||||||||||||
Sbjct: 103265 cccccctcaacaaatcctacat 103286

>gb|AC139750.3| Mus musculus BAC clone RP24-444K8 from chromosome 17, complete sequence
          Length = 160413

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 170   cgggttgctgctgcttctggt 190
             |||||||||||||||||||||
Sbjct: 34037 cgggttgctgctgcttctggt 34017

>gb|AY106346.1| Zea mays PCO069392 mRNA sequence
          Length = 1708

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 187  tggtcgccgaagatgcgggtgcggaagtc 215
            |||||||||||||||||  ||||||||||
Sbjct: 1359 tggtcgccgaagatgcgcttgcggaagtc 1331

>gb|AY394560.1| Campylobacter coli plasmid pCC31, complete sequence
          Length = 44707

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    acaaatcctacataacaaag 114
             ||||||||||||||||||||
Sbjct: 31397 acaaatcctacataacaaag 31378

>gb|AC160126.2| Mus musculus BAC clone RP23-295C1 from chromosome 13, complete sequence
          Length = 212570

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ttcattcattcattcccggt 47
             ||||||||||||||||||||
Sbjct: 14473 ttcattcattcattcccggt 14454

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    cgggtgcggaagtcctggac 221
              ||||||||||||||||||||
Sbjct: 569671 cgggtgcggaagtcctggac 569690

>emb|X68366.1|MTPFV1A M.thermoformicicum complete plasmid pFV1 DNA
          Length = 13514

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 50   ccctgctgttactgtcactcacac 73
            |||||||||||||||||| |||||
Sbjct: 5759 ccctgctgttactgtcacccacac 5736

>emb|AL713960.17| Mouse DNA sequence from clone RP23-448I9 on chromosome 11 Contains the
             5' end of the Car10 gene for carbonic anhydrase 10 and one
             CpG island, complete sequence
          Length = 203449

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    gggttcattcattcattccc 44
             ||||||||||||||||||||
Sbjct: 27074 gggttcattcattcattccc 27093

>emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chromosome 11 Contains the 5'
              end of the gene for a novel protein (9330163N21Rik), a
              ribosomal protein S2 (Rps2) pseudogene, the gene for a
              novel protein (E130018012Rik), the gene for a novel protein
              (6820428D13Rik), the Mrpl27 gene for mitochondrial
              ribosomal protein L27, the Xylt2 gene for
              xylosyltransferase II, a novel gene (5330426M11Rik), the
              gene for a novel protein (C230057C09Rik), the gene for a
              novel protein similar to Cdc34 and two pseudogenes similar
              to hypothetical protein Tr:Q8C517, complete sequence
          Length = 203262

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     ttccttctcctcccccctca 94
              ||||||||||||||||||||
Sbjct: 194112 ttccttctcctcccccctca 194131

>gb|AC092440.5| Homo sapiens BAC clone RP11-453O5 from 4, complete sequence
          Length = 164781

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     cccccctcaacaaatcctac 105
              ||||||||||||||||||||
Sbjct: 113014 cccccctcaacaaatcctac 112995

>gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, complete sequence
          Length = 238472

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  gggttgctgctgcttctggt 190
            ||||||||||||||||||||
Sbjct: 7232 gggttgctgctgcttctggt 7213

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 189      gtcgccgaagatgcgggtgcggaa 212
                |||||||||||||||| |||||||
Sbjct: 20328934 gtcgccgaagatgcggctgcggaa 20328957

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 131     atggagatggaggacgacgg 150
               ||||||||||||||||||||
Sbjct: 2809045 atggagatggaggacgacgg 2809064

>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0030H07
          Length = 168253

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   atggagatggaggacgacgg 150
             ||||||||||||||||||||
Sbjct: 16043 atggagatggaggacgacgg 16062

>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0009G03
          Length = 163526

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    atggagatggaggacgacgg 150
              ||||||||||||||||||||
Sbjct: 114722 atggagatggaggacgacgg 114741

>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0016D02
          Length = 157822

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 189   gtcgccgaagatgcgggtgcggaa 212
             |||||||||||||||| |||||||
Sbjct: 52329 gtcgccgaagatgcggctgcggaa 52352

>dbj|AK073833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068K09, full
           insert sequence
          Length = 1280

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 189 gtcgccgaagatgcgggtgcggaa 212
           |||||||||||||||| |||||||
Sbjct: 732 gtcgccgaagatgcggctgcggaa 709

>tpe|BN000617.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx88 gene for
           class III peroxidase 88 precursor, exons 1-3
          Length = 1139

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 189 gtcgccgaagatgcgggtgcggaa 212
           |||||||||||||||| |||||||
Sbjct: 812 gtcgccgaagatgcggctgcggaa 789

>dbj|AP003327.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-507F16, complete
              sequence
          Length = 188040

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    gggttgctgctgcttctggt 190
              ||||||||||||||||||||
Sbjct: 115913 gggttgctgctgcttctggt 115894

>emb|AJ871288.1| Gadus morhua immunoglobulin heavy chain locus, germline DNA
          Length = 11836

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 74   gttccttctcctcccccctc 93
            ||||||||||||||||||||
Sbjct: 2641 gttccttctcctcccccctc 2622

>emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chromosome 13, complete
             sequence
          Length = 231247

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ttcattcattcattcccggt 47
             ||||||||||||||||||||
Sbjct: 69023 ttcattcattcattcccggt 69004


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,339,955
Number of Sequences: 3902068
Number of extensions: 2339955
Number of successful extensions: 229905
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 229682
Number of HSP's gapped (non-prelim): 223
length of query: 232
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 210
effective length of database: 17,147,199,772
effective search space: 3600911952120
effective search space used: 3600911952120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)