ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart33h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC162163.2| Mus musculus chromosome 1, clone RP23-258N15, com... 48 0.026
2gb|AC100740.8| Mus musculus chromosome 1, clone RP24-421N21, com... 48 0.026
3gb|AC166124.4| Mus musculus chromosome 1, clone RP23-105N9, comp... 48 0.026
4gb|AC102324.9| Mus musculus chromosome 1, clone RP24-476A18, com... 44 0.41
5gb|AC107230.8| Mus musculus chromosome 18, clone RP23-238L23, co... 44 0.41
6gb|AC109179.7| Mus musculus chromosome 18, clone RP23-382N7, com... 44 0.41
7gb|AC157542.11| Mus musculus chromosome 1, clone RP23-115I1, com... 44 0.41
8ref|XM_635331.1| Dictyostelium discoideum hypothetical protein (... 42 1.6
9gb|AC120875.12| Mus musculus chromosome 1, clone RP23-317M5, com... 42 1.6
10gb|AC124550.4| Mus musculus BAC clone RP23-211F21 from chromosom... 42 1.6
11gb|AC117198.3| Mus musculus BAC clone RP23-127K18 from 9, comple... 42 1.6
12emb|AL353739.4| Human DNA sequence from clone RP11-19D15 on chro... 42 1.6
13gb|AC091076.7| Homo sapiens chromosome 8, clone RP11-53M11, comp... 42 1.6
14emb|AL928695.23| Zebrafish DNA sequence from clone CH211-217M19 ... 42 1.6
15gb|AC159038.1| Pan troglodytes BAC clone CH251-156A12 from chrom... 42 1.6
16gb|AC005235.2| Homo sapiens BAC clone RP11-439M9 from 2, complet... 42 1.6
17gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complet... 42 1.6
18gb|AC174451.3| Mus musculus BAC clone RP23-182A1 from chromosome... 42 1.6
19emb|Z73580.1|SCYPL224C S.cerevisiae chromosome XVI reading frame... 42 1.6
20emb|Z73579.1|SCYPL223C S.cerevisiae chromosome XVI reading frame... 42 1.6
21gb|AC140434.3| Mus musculus BAC clone RP24-105G15 from 3, comple... 42 1.6
22emb|CT025660.9| Mouse DNA sequence from clone RP24-79I19 on chro... 42 1.6
23dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 1.6
24gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, comp... 40 6.4
25ref|XM_001006479.1| PREDICTED: Mus musculus similar to protein k... 40 6.4
26gb|AC091524.4| Homo sapiens BAC clone RP11-132L11 from 7, comple... 40 6.4
27gb|AC005096.4| Homo sapiens BAC clone CTA-339C12 from 7, complet... 40 6.4
28gb|AC122325.4| Mus musculus BAC clone RP23-334H17 from chromosom... 40 6.4
29ref|XM_740852.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 6.4
30gb|AC110554.10| Mus musculus chromosome 8, clone RP23-249H16, co... 40 6.4
31gb|AC146152.2| Pan troglodytes BAC clone RP43-23M20 from 7, comp... 40 6.4
32emb|CR555290.8| Zebrafish DNA sequence from clone DKEYP-10A10 in... 40 6.4
33gb|AC149197.13| Medicago truncatula clone mth2-33p18, complete s... 40 6.4
34emb|AL354835.8| Human DNA sequence from clone RP11-164B1 on chro... 40 6.4
35gb|AC091536.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 6.4
36emb|CR380956.1| Candida glabrata strain CBS138 chromosome J comp... 40 6.4
37emb|CR380953.1| Candida glabrata strain CBS138 chromosome G comp... 40 6.4
38emb|AL645571.18| Mouse DNA sequence from clone RP23-39H1 on chro... 40 6.4
39gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell... 40 6.4
40gb|AC148834.3| Pan troglodytes BAC clone CH251-4D23 from chromos... 40 6.4
41gb|AC148395.12| Medicago truncatula clone mth2-28d22, complete s... 40 6.4
42gb|AC010037.7| Drosophila melanogaster 3L BAC RP98-6E4 (Roswell ... 40 6.4
43gb|AC091671.28| Papio anubis clone rp41-192i11, complete sequence 40 6.4
44gb|AC093560.2| Homo sapiens chromosome 1 clone RP11-398H19, comp... 40 6.4
45ref|NM_139920.1| Drosophila melanogaster CG7504-RA (CG7504), mRNA 40 6.4
46gb|M35878.1|HUMIBP3 Homo sapiens growth factor-binding protein-3... 40 6.4
47gb|AC019315.9| Homo sapiens chromosome , clone RP11-153A6, compl... 40 6.4
48gb|U55856.1| Caenorhabditis elegans cosmid F31E8, complete sequence 40 6.4
49emb|BX005027.13| Zebrafish DNA sequence from clone DKEY-4C2 in l... 40 6.4
50emb|AL954308.12| Zebrafish DNA sequence from clone DKEY-13J15 in... 40 6.4
51gb|AC105250.3| Homo sapiens BAC clone RP11-39C10 from 4, complet... 40 6.4
52gb|AC008555.5|AC008555 Homo sapiens chromosome 19 clone CTC-523E... 40 6.4
53gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 40 6.4
54gb|AC104115.3| Homo sapiens chromosome 5 clone RP11-252I14, comp... 40 6.4
55gb|AC126677.3| Mus musculus BAC clone RP24-156D14 from chromosom... 40 6.4
56gb|AC068057.5| Homo sapiens BAC clone CTD-2015C24 from 2, comple... 40 6.4
57dbj|BS000230.1| Pan troglodytes chromosome 22 clone:PTB-105H12, ... 40 6.4
58dbj|BS000229.1| Pan troglodytes chromosome 22 clone:RP43-015P20,... 40 6.4
59emb|BX640961.1|HSM807112 Homo sapiens mRNA; cDNA DKFZp686J08132 ... 40 6.4
60emb|CR759797.14| Zebrafish DNA sequence from clone DKEY-87K14 in... 40 6.4
61emb|CR388138.29| Zebrafish DNA sequence from clone DKEY-255D8 in... 40 6.4
62gb|AC007519.2|F16N3 Sequence of BAC F16N3 from Arabidopsis thali... 40 6.4
63gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29... 40 6.4
64dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.4
65emb|AL844840.8| Mouse DNA sequence from clone RP23-337P9 on chro... 40 6.4
66gb|AC159261.4| Mus musculus BAC clone RP24-80C13 from chromosome... 40 6.4
67gb|DQ301819.1| Homo sapiens insulin-like growth factor binding p... 40 6.4
68dbj|AP006083.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 6.4
69gb|AY951706.1| Hypoxylon carneum voucher YMJ 30 beta-tubulin gen... 40 6.4
70dbj|AP001627.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 6.4
71dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 6.4
72dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiestera... 40 6.4 
>gb|AC162163.2| Mus musculus chromosome 1, clone RP23-258N15, complete sequence
          Length = 176915

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 261   cattaaaagaaaaaagaagacgaaaaca 288
             ||||||||||||||| ||||||||||||
Sbjct: 17680 cattaaaagaaaaaataagacgaaaaca 17707
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>gb|AC100740.8| Mus musculus chromosome 1, clone RP24-421N21, complete sequence
          Length = 146835

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 261   cattaaaagaaaaaagaagacgaaaaca 288
             ||||||||||||||| ||||||||||||
Sbjct: 80929 cattaaaagaaaaaataagacgaaaaca 80956
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>gb|AC166124.4| Mus musculus chromosome 1, clone RP23-105N9, complete sequence
          Length = 226615

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 261    cattaaaagaaaaaagaagacgaaaaca 288
              ||||||||||||||| ||||||||||||
Sbjct: 183186 cattaaaagaaaaaataagacgaaaaca 183213
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>gb|AC102324.9| Mus musculus chromosome 1, clone RP24-476A18, complete sequence
          Length = 129634

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 265   aaaagaaaaaagaagacgaaaa 286
             ||||||||||||||||||||||
Sbjct: 70536 aaaagaaaaaagaagacgaaaa 70557
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>gb|AC107230.8| Mus musculus chromosome 18, clone RP23-238L23, complete sequence
          Length = 192286

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 180    aaaactattcttctttagttacaaaa 205
              |||| |||||||||||||||||||||
Sbjct: 181381 aaaattattcttctttagttacaaaa 181406
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>gb|AC109179.7| Mus musculus chromosome 18, clone RP23-382N7, complete sequence
          Length = 241644

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 180   aaaactattcttctttagttacaaaa 205
             |||| |||||||||||||||||||||
Sbjct: 87196 aaaattattcttctttagttacaaaa 87221
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>gb|AC157542.11| Mus musculus chromosome 1, clone RP23-115I1, complete sequence
          Length = 211677

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 265    aaaagaaaaaagaagacgaaaa 286
              ||||||||||||||||||||||
Sbjct: 122964 aaaagaaaaaagaagacgaaaa 122985
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>ref|XM_635331.1| Dictyostelium discoideum hypothetical protein (DDB0218353), partial
           mRNA
          Length = 1155

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 269 gaaaaaagaagacgaaaacaa 289
           |||||||||||||||||||||
Sbjct: 823 gaaaaaagaagacgaaaacaa 843
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>gb|AC120875.12| Mus musculus chromosome 1, clone RP23-317M5, complete sequence
          Length = 195159

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   ccattaaaagaaaaaagaaga 280
             |||||||||||||||||||||
Sbjct: 87858 ccattaaaagaaaaaagaaga 87878
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>gb|AC124550.4| Mus musculus BAC clone RP23-211F21 from chromosome 1, complete sequence
          Length = 204588

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 260    ccattaaaagaaaaaagaaga 280
              |||||||||||||||||||||
Sbjct: 200033 ccattaaaagaaaaaagaaga 200053
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>gb|AC117198.3| Mus musculus BAC clone RP23-127K18 from 9, complete sequence
          Length = 193044

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 265    aaaagaaaaaagaagacgaaa 285
              |||||||||||||||||||||
Sbjct: 170782 aaaagaaaaaagaagacgaaa 170762
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>emb|AL353739.4| Human DNA sequence from clone RP11-19D15 on chromosome 20 Contains STSs
             and GSSs, complete sequence
          Length = 101388

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 262   attaaaagaaaaaagaagacgaaaa 286
             ||||||||||||||||||| |||||
Sbjct: 76168 attaaaagaaaaaagaagaagaaaa 76192
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>gb|AC091076.7| Homo sapiens chromosome 8, clone RP11-53M11, complete sequence
          Length = 162374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 10     attacatgcacaaatgtattt 30
              |||||||||||||||||||||
Sbjct: 152228 attacatgcacaaatgtattt 152248
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>emb|AL928695.23| Zebrafish DNA sequence from clone CH211-217M19 in linkage group 16,
             complete sequence
          Length = 215878

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    acatgcacaaatgtatttcag 33
             |||||||||||||||||||||
Sbjct: 50680 acatgcacaaatgtatttcag 50660
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>gb|AC159038.1| Pan troglodytes BAC clone CH251-156A12 from chromosome unknown, complete
              sequence
          Length = 183175

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 261    cattaaaagaaaaaagaagacgaaaacaa 289
              ||||||||||||||| |||| ||||||||
Sbjct: 146642 cattaaaagaaaaaataagatgaaaacaa 146670
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>gb|AC005235.2| Homo sapiens BAC clone RP11-439M9 from 2, complete sequence
          Length = 197911

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 261    cattaaaagaaaaaagaagacgaaaacaa 289
              ||||||||||||||| |||| ||||||||
Sbjct: 103133 cattaaaagaaaaaataagatgaaaacaa 103105
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>gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complete sequence
          Length = 182632

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 258   caccattaaaagaaaaaagaa 278
             |||||||||||||||||||||
Sbjct: 89483 caccattaaaagaaaaaagaa 89503
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>gb|AC174451.3| Mus musculus BAC clone RP23-182A1 from chromosome 3, complete sequence
          Length = 205136

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 417   ctatcaactgtttggatgtgt 437
             |||||||||||||||||||||
Sbjct: 94513 ctatcaactgtttggatgtgt 94493
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>emb|Z73580.1|SCYPL224C S.cerevisiae chromosome XVI reading frame ORF YPL224c
          Length = 2184

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 265  aaaagaaaaaagaagacgaaa 285
            |||||||||||||||||||||
Sbjct: 2085 aaaagaaaaaagaagacgaaa 2105
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>emb|Z73579.1|SCYPL223C S.cerevisiae chromosome XVI reading frame ORF YPL223c
          Length = 2073

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 265 aaaagaaaaaagaagacgaaa 285
           |||||||||||||||||||||
Sbjct: 444 aaaagaaaaaagaagacgaaa 464
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>gb|AC140434.3| Mus musculus BAC clone RP24-105G15 from 3, complete sequence
          Length = 160839

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 417    ctatcaactgtttggatgtgt 437
              |||||||||||||||||||||
Sbjct: 124469 ctatcaactgtttggatgtgt 124449
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>emb|CT025660.9| Mouse DNA sequence from clone RP24-79I19 on chromosome 9, complete
             sequence
          Length = 219226

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 265   aaaagaaaaaagaagacgaaa 285
             |||||||||||||||||||||
Sbjct: 94882 aaaagaaaaaagaagacgaaa 94902
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>dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13O11, TM0069,
             complete sequence
          Length = 103659

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 262   attaaaagaaaaaagaagacgaaaa 286
             ||||||||||||||||||| |||||
Sbjct: 75667 attaaaagaaaaaagaagaagaaaa 75691
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>gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, complete sequence
          Length = 213387

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 87     ccagtatcatcacttcgctccagg 110
              |||||||||||||||| |||||||
Sbjct: 109610 ccagtatcatcacttccctccagg 109633
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>ref|XM_001006479.1| PREDICTED: Mus musculus similar to protein kinase C binding protein
           1 isoform 2 (LOC673862), mRNA
          Length = 207

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 251 ctgcaagcaccattaaaagaaaaa 274
           |||||||| |||||||||||||||
Sbjct: 167 ctgcaagccccattaaaagaaaaa 190
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>gb|AC091524.4| Homo sapiens BAC clone RP11-132L11 from 7, complete sequence
          Length = 69887

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   attaaaagaaaaaagaagac 281
             ||||||||||||||||||||
Sbjct: 33139 attaaaagaaaaaagaagac 33158
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>gb|AC005096.4| Homo sapiens BAC clone CTA-339C12 from 7, complete sequence
          Length = 185376

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    attaaaagaaaaaagaagac 281
              ||||||||||||||||||||
Sbjct: 114498 attaaaagaaaaaagaagac 114517
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>gb|AC122325.4| Mus musculus BAC clone RP23-334H17 from chromosome 5, complete sequence
          Length = 184869

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 308    aagctggtgtattcgcacaacact 331
              |||||||||||||| |||||||||
Sbjct: 131226 aagctggtgtattcacacaacact 131249
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>ref|XM_740852.1| Plasmodium chabaudi chabaudi hypothetical protein (PC105689.00.0)
           partial mRNA
          Length = 798

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 aaaaaagaagacgaaaacaa 289
           ||||||||||||||||||||
Sbjct: 374 aaaaaagaagacgaaaacaa 393
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>gb|AC110554.10| Mus musculus chromosome 8, clone RP23-249H16, complete sequence
          Length = 170361

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 87     ccagtatcatcacttcgctccagg 110
              |||||||||||||||| |||||||
Sbjct: 165594 ccagtatcatcacttccctccagg 165571
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>gb|AC146152.2| Pan troglodytes BAC clone RP43-23M20 from 7, complete sequence
          Length = 141539

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    attaaaagaaaaaagaagac 281
              ||||||||||||||||||||
Sbjct: 114635 attaaaagaaaaaagaagac 114616
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>emb|CR555290.8| Zebrafish DNA sequence from clone DKEYP-10A10 in linkage group 10,
             complete sequence
          Length = 83568

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 263   ttaaaagaaaaaagaagacgaaaa 286
             ||||||||||||| ||||||||||
Sbjct: 38463 ttaaaagaaaaaaaaagacgaaaa 38486
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>gb|AC149197.13| Medicago truncatula clone mth2-33p18, complete sequence
          Length = 115362

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    cattaaaagaaaaaagaaga 280
              ||||||||||||||||||||
Sbjct: 112674 cattaaaagaaaaaagaaga 112693
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>emb|AL354835.8| Human DNA sequence from clone RP11-164B1 on chromosome 13q31.1-32.3,
             complete sequence
          Length = 159620

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   ggctggagaggacatgaagc 157
             ||||||||||||||||||||
Sbjct: 44113 ggctggagaggacatgaagc 44132
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>gb|AC091536.2| Rattus norvegicus strain Brown Norway clone RP31-547A5, complete
             sequence
          Length = 175512

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   aaaagaaaaaagaagacgaa 284
             ||||||||||||||||||||
Sbjct: 72393 aaaagaaaaaagaagacgaa 72374
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>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    agcaccattaaaagaaaaaa 275
              ||||||||||||||||||||
Sbjct: 391797 agcaccattaaaagaaaaaa 391778
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>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence
          Length = 992211

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    cattaaaagaaaaaagaaga 280
              ||||||||||||||||||||
Sbjct: 949601 cattaaaagaaaaaagaaga 949620
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>emb|AL645571.18| Mouse DNA sequence from clone RP23-39H1 on chromosome 11 Contains a
            general transcription factor II A, 1 (Gtf2a1) pseudogene,
            the 3' end of the Pkd1l1 gene for polycystic kidney
            disease 1 like 1 and a heterogeneous nuclear
            ribonucleoprotein A3 (Hnrpa3) pseudogene, complete
            sequence
          Length = 235198

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 267  aagaaaaaagaagacgaaaacaaa 290
            |||||||||||||| |||||||||
Sbjct: 7582 aagaaaaaagaagaagaaaacaaa 7559
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>gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 185790

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   aagaaaaaagaagacgaaaa 286
             ||||||||||||||||||||
Sbjct: 84204 aagaaaaaagaagacgaaaa 84223
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>gb|AC148834.3| Pan troglodytes BAC clone CH251-4D23 from chromosome 7, complete sequence
          Length = 192312

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    attaaaagaaaaaagaagac 281
              ||||||||||||||||||||
Sbjct: 164731 attaaaagaaaaaagaagac 164750
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>gb|AC148395.12| Medicago truncatula clone mth2-28d22, complete sequence
          Length = 116174

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  cattaaaagaaaaaagaaga 280
            ||||||||||||||||||||
Sbjct: 3500 cattaaaagaaaaaagaaga 3481
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>gb|AC010037.7| Drosophila melanogaster 3L BAC RP98-6E4 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 187555

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    aagaaaaaagaagacgaaaa 286
              ||||||||||||||||||||
Sbjct: 138809 aagaaaaaagaagacgaaaa 138828
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>gb|AC091671.28| Papio anubis clone rp41-192i11, complete sequence
          Length = 173021

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   aaaagaaaaaagaagacgaa 284
             ||||||||||||||||||||
Sbjct: 53260 aaaagaaaaaagaagacgaa 53279
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>gb|AC093560.2| Homo sapiens chromosome 1 clone RP11-398H19, complete sequence
          Length = 199594

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 262   attaaaagaaaaaagaagacgaaa 285
             ||||||||||||||||||| ||||
Sbjct: 96329 attaaaagaaaaaagaagaagaaa 96352
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>ref|NM_139920.1| Drosophila melanogaster CG7504-RA (CG7504), mRNA
          Length = 4254

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 267  aagaaaaaagaagacgaaaa 286
            ||||||||||||||||||||
Sbjct: 1513 aagaaaaaagaagacgaaaa 1532
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>gb|M35878.1|HUMIBP3 Homo sapiens growth factor-binding protein-3 precursor (IGFBP3) gene,
            complete cds
          Length = 10884

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  attaaaagaaaaaagaagac 281
            ||||||||||||||||||||
Sbjct: 8948 attaaaagaaaaaagaagac 8929
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>gb|AC019315.9| Homo sapiens chromosome , clone RP11-153A6, complete sequence
          Length = 152057

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 265   aaaagaaaaaagaagacgaaaaca 288
             |||||||||||||||| |||||||
Sbjct: 59470 aaaagaaaaaagaagaagaaaaca 59447
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>gb|U55856.1| Caenorhabditis elegans cosmid F31E8, complete sequence
          Length = 35743

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   aaaagaaaaaagaagacgaa 284
             ||||||||||||||||||||
Sbjct: 11496 aaaagaaaaaagaagacgaa 11477
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>emb|BX005027.13| Zebrafish DNA sequence from clone DKEY-4C2 in linkage group 10, complete
              sequence
          Length = 241472

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     atatgatttgtatacaatca 72
              ||||||||||||||||||||
Sbjct: 216191 atatgatttgtatacaatca 216172
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>emb|AL954308.12| Zebrafish DNA sequence from clone DKEY-13J15 in linkage group 4,
             complete sequence
          Length = 223608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   agcaccattaaaagaaaaaa 275
             ||||||||||||||||||||
Sbjct: 14402 agcaccattaaaagaaaaaa 14383
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>gb|AC105250.3| Homo sapiens BAC clone RP11-39C10 from 4, complete sequence
          Length = 70449

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   gcaccattaaaagaaaaaag 276
             ||||||||||||||||||||
Sbjct: 42437 gcaccattaaaagaaaaaag 42456
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>gb|AC008555.5|AC008555 Homo sapiens chromosome 19 clone CTC-523E23, complete sequence
          Length = 199157

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   ctgagagtggctggagagga 149
             ||||||||||||||||||||
Sbjct: 56306 ctgagagtggctggagagga 56287
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 265    aaaagaaaaaagaagacgaa 284
              ||||||||||||||||||||
Sbjct: 479982 aaaagaaaaaagaagacgaa 479963
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>gb|AC104115.3| Homo sapiens chromosome 5 clone RP11-252I14, complete sequence
          Length = 115793

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   gactgagagtggctggagag 147
             ||||||||||||||||||||
Sbjct: 28204 gactgagagtggctggagag 28185
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>gb|AC126677.3| Mus musculus BAC clone RP24-156D14 from chromosome 9, complete sequence
          Length = 152468

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 119   ggactgactgactgagagtggctg 142
             ||||||||||||||||||| ||||
Sbjct: 82229 ggactgactgactgagagttgctg 82252
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>gb|AC068057.5| Homo sapiens BAC clone CTD-2015C24 from 2, complete sequence
          Length = 106538

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   tgatggtgtacttcttccag 365
             ||||||||||||||||||||
Sbjct: 54413 tgatggtgtacttcttccag 54394
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>dbj|BS000230.1| Pan troglodytes chromosome 22 clone:PTB-105H12, map 22, complete
             sequences
          Length = 242704

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 251   ctgcaagcaccattaaaagaaaaaagaa 278
             ||||||| | ||||||||||||||||||
Sbjct: 27799 ctgcaagaaacattaaaagaaaaaagaa 27772
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>dbj|BS000229.1| Pan troglodytes chromosome 22 clone:RP43-015P20, map 22, complete
              sequences
          Length = 179285

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 251    ctgcaagcaccattaaaagaaaaaagaa 278
              ||||||| | ||||||||||||||||||
Sbjct: 120577 ctgcaagaaacattaaaagaaaaaagaa 120550
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>emb|BX640961.1|HSM807112 Homo sapiens mRNA; cDNA DKFZp686J08132 (from clone DKFZp686J08132)
          Length = 3708

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  attaaaagaaaaaagaagac 281
            ||||||||||||||||||||
Sbjct: 1861 attaaaagaaaaaagaagac 1842
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>emb|CR759797.14| Zebrafish DNA sequence from clone DKEY-87K14 in linkage group 17,
              complete sequence
          Length = 181261

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 265    aaaagaaaaaagaagacgaaaaca 288
              |||||||||||||| |||||||||
Sbjct: 176219 aaaagaaaaaagaaaacgaaaaca 176196
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>emb|CR388138.29| Zebrafish DNA sequence from clone DKEY-255D8 in linkage group 8,
            complete sequence
          Length = 232320

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 421  caactgtttggatgtgtgcc 440
            ||||||||||||||||||||
Sbjct: 3165 caactgtttggatgtgtgcc 3184
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>gb|AC007519.2|F16N3 Sequence of BAC F16N3 from Arabidopsis thaliana chromosome 1, complete
              sequence
          Length = 171769

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    aaaagaaaaaagaagacgaa 284
              ||||||||||||||||||||
Sbjct: 129710 aaaagaaaaaagaagacgaa 129729
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>gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29 of 83 of the complete
             sequence
          Length = 281917

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   aagaaaaaagaagacgaaaa 286
             ||||||||||||||||||||
Sbjct: 83258 aagaaaaaagaagacgaaaa 83239
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>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 251    ctgcaagcaccattaaaagaaaaaagaa 278
              ||||||| | ||||||||||||||||||
Sbjct: 212100 ctgcaagaaacattaaaagaaaaaagaa 212073
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>emb|AL844840.8| Mouse DNA sequence from clone RP23-337P9 on chromosome 2, complete
             sequence
          Length = 219568

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 263   ttaaaagaaaaaagaagacgaaaacaaa 290
             |||||||||||||||| || ||||||||
Sbjct: 12041 ttaaaagaaaaaagaaaacaaaaacaaa 12014
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>gb|AC159261.4| Mus musculus BAC clone RP24-80C13 from chromosome 13, complete sequence
          Length = 230437

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    aaaaaagaagacgaaaacaa 289
              ||||||||||||||||||||
Sbjct: 202720 aaaaaagaagacgaaaacaa 202701
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>gb|DQ301819.1| Homo sapiens insulin-like growth factor binding protein 3 (IGFBP3)
            gene, complete cds
          Length = 12958

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  attaaaagaaaaaagaagac 281
            ||||||||||||||||||||
Sbjct: 9029 attaaaagaaaaaagaagac 9010
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>dbj|AP006083.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT44D21, TM0127a,
            complete sequence
          Length = 26994

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  aaaaagaagacgaaaacaaa 290
            ||||||||||||||||||||
Sbjct: 4089 aaaaagaagacgaaaacaaa 4070
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>gb|AY951706.1| Hypoxylon carneum voucher YMJ 30 beta-tubulin gene, partial
           sequence
          Length = 1641

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 265 aaaagaaaaaagaagacgaaaaca 288
           |||||||||||||||| |||||||
Sbjct: 91  aaaagaaaaaagaagaagaaaaca 114
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>dbj|AP001627.1| Homo sapiens genomic DNA, chromosome 21, clone:KB161B8, MX1-D21S171
             region, complete sequence
          Length = 125376

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 251   ctgcaagcaccattaaaagaaaaaagaa 278
             ||||||| | ||||||||||||||||||
Sbjct: 45225 ctgcaagaaacattaaaagaaaaaagaa 45198
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>dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1559F8, MX1-D21S171
              region, complete sequence
          Length = 145762

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 251    ctgcaagcaccattaaaagaaaaaagaa 278
              ||||||| | ||||||||||||||||||
Sbjct: 143148 ctgcaagaaacattaaaagaaaaaagaa 143121
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>dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiesterase, complete cds
          Length = 125000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 251   ctgcaagcaccattaaaagaaaaaagaa 278
             ||||||| | ||||||||||||||||||
Sbjct: 66533 ctgcaagaaacattaaaagaaaaaagaa 66506


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,980,622
Number of Sequences: 3902068
Number of extensions: 5980622
Number of successful extensions: 239554
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 239268
Number of HSP's gapped (non-prelim): 286
length of query: 471
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 449
effective length of database: 17,147,199,772
effective search space: 7699092697628
effective search space used: 7699092697628
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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