ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart33h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4,... 153 6e-34
2tpg|BK001566.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 153 6e-34
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
4dbj|AK103788.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 6e-34
5dbj|AK101129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 6e-34
6ref|XM_472718.1| Oryza sativa (japonica cultivar-group), predic... 151 2e-33
7gb|AY596573.1| Saccharum officinarum clone SCCCLR1C01D11, comple... 123 5e-25
8gb|AY107167.1| Zea mays PCO149856 mRNA sequence 100 7e-18
9gb|AY111811.1| Zea mays CL5517_1 mRNA sequence 56 1e-04
10gb|AY596560.1| Saccharum officinarum clone SCUTLR1037C12, comple... 54 4e-04
11ref|XM_466380.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
13dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
14dbj|AK059246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
15ref|XM_479197.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.024
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.024
17dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.024
18dbj|AK063642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.024
19ref|NM_127793.3| Arabidopsis thaliana unknown protein AT2G22270 ... 42 1.5
20gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genom... 42 1.5
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
22emb|AL355980.6| Human DNA sequence from clone RP11-295L12 on chr... 42 1.5
23gb|AC007168.5| Arabidopsis thaliana chromosome 2 clone T26C19 ma... 42 1.5
24dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25gb|AC156807.2| Pan troglodytes BAC clone CH251-353P10 from chrom... 42 1.5
26gb|AY089019.1| Arabidopsis thaliana clone 17172 mRNA, complete s... 42 1.5
27dbj|AK101680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
28dbj|AK068724.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
29dbj|AK060532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
30emb|AL109767.7|CNS018OX Human chromosome 14 DNA sequence BAC R-8... 42 1.5
31emb|AL132819.6|CNS01DTO Human chromosome 14 DNA sequence BAC C-2... 42 1.5 
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15,
              complete sequence
          Length = 143109

 Score =  153 bits (77), Expect = 6e-34
 Identities = 128/145 (88%)
 Strand = Plus / Plus

                                                                          
Query: 292    attagatgagtgcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagt 351
              ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 107376 attagatcagtgcaatgctgctctcgccaccagggggcttgcggacaccgccgagatagt 107435

                                                                          
Query: 352    ctcgcgaagacgcctttccatcggagaatatgtcattgccgctcatctccttaagctttg 411
              |||| | ||  |||  |||||| |  || |||||| |||||||||||||||| |||||||
Sbjct: 107436 ctcggggagctgccgctccatcagcaaagatgtcactgccgctcatctccttcagctttg 107495

                                       
Query: 412    ctgagctcagagacttgtcagctga 436
              ||||||||||||| || ||||||||
Sbjct: 107496 ctgagctcagagatttctcagctga 107520



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                           
Query: 139    gagtcagatcctgctgactctacactatattagggctaagatatc 183
              ||||||||| |||||||||||| |  |||| ||||| ||||||||
Sbjct: 107227 gagtcagattctgctgactctagatgatatcagggccaagatatc 107271



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 73     gagattaatacataagtacca 93
              |||||||||||||||||||||
Sbjct: 107165 gagattaatacataagtacca 107185
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>tpg|BK001566.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) HN1-like protein
            isoform 1 mRNA, complete cds
          Length = 1262

 Score =  153 bits (77), Expect = 6e-34
 Identities = 128/145 (88%)
 Strand = Plus / Minus

                                                                        
Query: 292  attagatgagtgcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagt 351
            ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 1016 attagatcagtgcaatgctgctctcgccaccagggggcttgcggacaccgccgagatagt 957

                                                                        
Query: 352  ctcgcgaagacgcctttccatcggagaatatgtcattgccgctcatctccttaagctttg 411
            |||| | ||  |||  |||||| |  || |||||| |||||||||||||||| |||||||
Sbjct: 956  ctcggggagctgccgctccatcagcaaagatgtcactgccgctcatctccttcagctttg 897

                                     
Query: 412  ctgagctcagagacttgtcagctga 436
            ||||||||||||| || ||||||||
Sbjct: 896  ctgagctcagagatttctcagctga 872



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 73   gagattaatacataagtacca 93
            |||||||||||||||||||||
Sbjct: 1227 gagattaatacataagtacca 1207



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 139  gagtcagatcctgctgactctacactatattagggctaagatatc 183
            ||||||||| |||||||||||| |  |||| ||||| ||||||||
Sbjct: 1165 gagtcagattctgctgactctagatgatatcagggccaagatatc 1121
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  153 bits (77), Expect = 6e-34
 Identities = 128/145 (88%)
 Strand = Plus / Plus

                                                                            
Query: 292      attagatgagtgcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagt 351
                ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 22770180 attagatcagtgcaatgctgctctcgccaccagggggcttgcggacaccgccgagatagt 22770239

                                                                            
Query: 352      ctcgcgaagacgcctttccatcggagaatatgtcattgccgctcatctccttaagctttg 411
                |||| | ||  |||  |||||| |  || |||||| |||||||||||||||| |||||||
Sbjct: 22770240 ctcggggagctgccgctccatcagcaaagatgtcactgccgctcatctccttcagctttg 22770299

                                         
Query: 412      ctgagctcagagacttgtcagctga 436
                ||||||||||||| || ||||||||
Sbjct: 22770300 ctgagctcagagatttctcagctga 22770324



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 139      gagtcagatcctgctgactctacactatattagggctaagatatc 183
                ||||||||| |||||||||||| |  |||| ||||| ||||||||
Sbjct: 22770031 gagtcagattctgctgactctagatgatatcagggccaagatatc 22770075



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 73       gagattaatacataagtacca 93
                |||||||||||||||||||||
Sbjct: 22769969 gagattaatacataagtacca 22769989
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>dbj|AK103788.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145I18, full
            insert sequence
          Length = 1373

 Score =  153 bits (77), Expect = 6e-34
 Identities = 128/145 (88%)
 Strand = Plus / Minus

                                                                        
Query: 292  attagatgagtgcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagt 351
            ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 1016 attagatcagtgcaatgctgctctcgccaccagggggcttgcggacaccgccgagatagt 957

                                                                        
Query: 352  ctcgcgaagacgcctttccatcggagaatatgtcattgccgctcatctccttaagctttg 411
            |||| | ||  |||  |||||| |  || |||||| |||||||||||||||| |||||||
Sbjct: 956  ctcggggagctgccgctccatcagcaaagatgtcactgccgctcatctccttcagctttg 897

                                     
Query: 412  ctgagctcagagacttgtcagctga 436
            ||||||||||||| || ||||||||
Sbjct: 896  ctgagctcagagatttctcagctga 872



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 73   gagattaatacataagtacca 93
            |||||||||||||||||||||
Sbjct: 1227 gagattaatacataagtacca 1207



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 139  gagtcagatcctgctgactctacactatattagggctaagatatc 183
            ||||||||| |||||||||||| |  |||| ||||| ||||||||
Sbjct: 1165 gagtcagattctgctgactctagatgatatcagggccaagatatc 1121
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>dbj|AK101129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025P19, full
            insert sequence
          Length = 1262

 Score =  153 bits (77), Expect = 6e-34
 Identities = 128/145 (88%)
 Strand = Plus / Minus

                                                                        
Query: 292  attagatgagtgcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagt 351
            ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 1016 attagatcagtgcaatgctgctctcgccaccagggggcttgcggacaccgccgagatagt 957

                                                                        
Query: 352  ctcgcgaagacgcctttccatcggagaatatgtcattgccgctcatctccttaagctttg 411
            |||| | ||  |||  |||||| |  || |||||| |||||||||||||||| |||||||
Sbjct: 956  ctcggggagctgccgctccatcagcaaagatgtcactgccgctcatctccttcagctttg 897

                                     
Query: 412  ctgagctcagagacttgtcagctga 436
            ||||||||||||| || ||||||||
Sbjct: 896  ctgagctcagagatttctcagctga 872



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 73   gagattaatacataagtacca 93
            |||||||||||||||||||||
Sbjct: 1227 gagattaatacataagtacca 1207



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 139  gagtcagatcctgctgactctacactatattagggctaagatatc 183
            ||||||||| |||||||||||| |  |||| ||||| ||||||||
Sbjct: 1165 gagtcagattctgctgactctagatgatatcagggccaagatatc 1121
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>ref|XM_472718.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 918

 Score =  151 bits (76), Expect = 2e-33
 Identities = 127/144 (88%)
 Strand = Plus / Minus

                                                                       
Query: 293 ttagatgagtgcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagtc 352
           |||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 918 ttagatcagtgcaatgctgctctcgccaccagggggcttgcggacaccgccgagatagtc 859

                                                                       
Query: 353 tcgcgaagacgcctttccatcggagaatatgtcattgccgctcatctccttaagctttgc 412
           ||| | ||  |||  |||||| |  || |||||| |||||||||||||||| ||||||||
Sbjct: 858 tcggggagctgccgctccatcagcaaagatgtcactgccgctcatctccttcagctttgc 799

                                   
Query: 413 tgagctcagagacttgtcagctga 436
           |||||||||||| || ||||||||
Sbjct: 798 tgagctcagagatttctcagctga 775
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>gb|AY596573.1| Saccharum officinarum clone SCCCLR1C01D11, complete sequence
          Length = 1372

 Score =  123 bits (62), Expect = 5e-25
 Identities = 152/182 (83%)
 Strand = Plus / Minus

                                                                        
Query: 261  tagccagtcccgactagagcagtctaccataattagatgagtgcaatgctgctctcgcca 320
            ||||||||||  |||| ||||||| |  | ||| |||| || || |||||||||||||||
Sbjct: 1085 tagccagtccgaactaaagcagtccagaacaatcagatcagagcgatgctgctctcgcca 1026

                                                                        
Query: 321  ccagggggcttccggacaccgccgaggtagtctcgcgaagacgcctttccatcggagaat 380
            ||||||||||||||||  ||||||||||| ||||| | ||  |   |||||||||  || 
Sbjct: 1025 ccagggggcttccggatgccgccgaggtattctcggggagctggagttccatcggcaaag 966

                                                                        
Query: 381  atgtcattgccgctcatctccttaagctttgctgagctcagagacttgtcagctgagcca 440
            |||||| |||||||||||||||| ||||| || |||||||||||||| ||||||||| ||
Sbjct: 965  atgtcactgccgctcatctccttcagcttcgcagagctcagagacttctcagctgaggca 906

              
Query: 441  gg 442
            ||
Sbjct: 905  gg 904



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 136  accgagtcagatcctgctgactctacactatattag 171
            |||||||||||| |||||||||||||| ||||||||
Sbjct: 1220 accgagtcagattctgctgactctacattatattag 1185
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>gb|AY107167.1| Zea mays PCO149856 mRNA sequence
          Length = 1497

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                        
Query: 306  atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 365
            ||||||||||| || ||||||||||||||||  ||||| ||||| ||||| | ||  | |
Sbjct: 1023 atgctgctctcaccgccagggggcttccggatgccgccaaggtattctcggggagctggc 964

                                                                        
Query: 366  tttccatcggagaatatgtcattgccgctcatctccttaagctttgctgagctcagagac 425
             ||||||||| ||| |||||| |||||||||||||||| ||||| || ||||||||||||
Sbjct: 963  gttccatcggcgaagatgtcactgccgctcatctccttcagcttcgcagagctcagagac 904

              
Query: 426  tt 427
            ||
Sbjct: 903  tt 902
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>gb|AY111811.1| Zea mays CL5517_1 mRNA sequence
          Length = 1222

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 306 atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 365
           ||||||||||| || ||||| ||||| ||||  |||||||||||||| ||||| |   ||
Sbjct: 893 atgctgctctccccgccaggcggcttgcggatcccgccgaggtagtcccgcgaggggccc 834

                                                                   
Query: 366 tttccatcggagaatatgtcattgccgctcatctccttaagctttgctgagctcag 421
           || || || | ||| |||||  ||||| |||||||||| ||||| |||| ||||||
Sbjct: 833 ttcccgtccgcgaagatgtcgctgccggtcatctccttcagcttcgctgtgctcag 778
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>gb|AY596560.1| Saccharum officinarum clone SCUTLR1037C12, complete sequence
          Length = 1314

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 87/107 (81%)
 Strand = Plus / Minus

                                                                        
Query: 303  gcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagac 362
            |||||||||||||| |||||||| ||||| ||||  ||||| |||||||| || || |  
Sbjct: 1058 gcaatgctgctctccccaccaggcggcttgcggatcccgcccaggtagtcccgggagggg 999

                                                           
Query: 363  gcctttccatcggagaatatgtcattgccgctcatctccttaagctt 409
            ||||| || || | ||| |||||  ||||| |||||||||| |||||
Sbjct: 998  gccttcccgtccgcgaagatgtcgctgccggtcatctccttcagctt 952
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>ref|XM_466380.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1150

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 306 atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 365
           ||||||||| |||| ||||| ||||||| ||| || |||| |||||| || || | | ||
Sbjct: 976 atgctgctcccgccgccaggaggcttcctgacgcctccgaagtagtcccgggaggccacc 917

                                                                       
Query: 366 tttccatcggagaatatgtcattgccgctcatctccttaagctttgctgagctcagagac 425
           || ||||||| ||| ||||   |||| ||||||||||| ||||| || | |||||| |||
Sbjct: 916 ttcccatcggcgaagatgttgctgccactcatctccttgagcttcgccgtgctcagggac 857

             
Query: 426 tt 427
           ||
Sbjct: 856 tt 855
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Plus

                                                                            
Query: 306      atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 365
                ||||||||| |||| ||||| ||||||| ||| || |||| |||||| || || | | ||
Sbjct: 22063466 atgctgctcccgccgccaggaggcttcctgacgcctccgaagtagtcccgggaggccacc 22063525

                                                                            
Query: 366      tttccatcggagaatatgtcattgccgctcatctccttaagctttgctgagctcagagac 425
                || ||||||| ||| ||||   |||| ||||||||||| ||||| || | |||||| |||
Sbjct: 22063526 ttcccatcggcgaagatgttgctgccactcatctccttgagcttcgccgtgctcagggac 22063585

                  
Query: 426      tt 427
                ||
Sbjct: 22063586 tt 22063587
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>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0703B01
          Length = 137445

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Plus

                                                                         
Query: 306   atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 365
             ||||||||| |||| ||||| ||||||| ||| || |||| |||||| || || | | ||
Sbjct: 37365 atgctgctcccgccgccaggaggcttcctgacgcctccgaagtagtcccgggaggccacc 37424

                                                                         
Query: 366   tttccatcggagaatatgtcattgccgctcatctccttaagctttgctgagctcagagac 425
             || ||||||| ||| ||||   |||| ||||||||||| ||||| || | |||||| |||
Sbjct: 37425 ttcccatcggcgaagatgttgctgccactcatctccttgagcttcgccgtgctcagggac 37484

               
Query: 426   tt 427
             ||
Sbjct: 37485 tt 37486
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>dbj|AK059246.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G05, full
           insert sequence
          Length = 1150

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 306 atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 365
           ||||||||| |||| ||||| ||||||| ||| || |||| |||||| || || | | ||
Sbjct: 976 atgctgctcccgccgccaggaggcttcctgacgcctccgaagtagtcccgggaggccacc 917

                                                                       
Query: 366 tttccatcggagaatatgtcattgccgctcatctccttaagctttgctgagctcagagac 425
           || ||||||| ||| ||||   |||| ||||||||||| ||||| || | |||||| |||
Sbjct: 916 ttcccatcggcgaagatgttgctgccactcatctccttgagcttcgccgtgctcagggac 857

             
Query: 426 tt 427
           ||
Sbjct: 856 tt 855
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>ref|XM_479197.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1305

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                        
Query: 306  atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 365
            |||||||||||||| || |||||||| ||||  || || |||||||| ||||| | ||| 
Sbjct: 1033 atgctgctctcgccgccggggggcttgcggatcccaccaaggtagtcccgcgacggcgct 974

                                                        
Query: 366  tttccatcggagaatatgtcattgccgctcatctccttaagctt 409
            || || || | ||| |||||  ||||| |||||||||| |||||
Sbjct: 973  ttgccgtccgcgaagatgtcgctgccggtcatctccttcagctt 930
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                            
Query: 306      atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 365
                |||||||||||||| || |||||||| ||||  || || |||||||| ||||| | ||| 
Sbjct: 25751136 atgctgctctcgccgccggggggcttgcggatcccaccaaggtagtcccgcgacggcgct 25751195

                                                            
Query: 366      tttccatcggagaatatgtcattgccgctcatctccttaagctt 409
                || || || | ||| |||||  ||||| |||||||||| |||||
Sbjct: 25751196 ttgccgtccgcgaagatgtcgctgccggtcatctccttcagctt 25751239
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>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524E08
          Length = 154696

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                         
Query: 306   atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 365
             |||||||||||||| || |||||||| ||||  || || |||||||| ||||| | ||| 
Sbjct: 68298 atgctgctctcgccgccggggggcttgcggatcccaccaaggtagtcccgcgacggcgct 68357

                                                         
Query: 366   tttccatcggagaatatgtcattgccgctcatctccttaagctt 409
             || || || | ||| |||||  ||||| |||||||||| |||||
Sbjct: 68358 ttgccgtccgcgaagatgtcgctgccggtcatctccttcagctt 68401
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>dbj|AK063642.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G12, full
            insert sequence
          Length = 1305

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                        
Query: 306  atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 365
            |||||||||||||| || |||||||| ||||  || || |||||||| ||||| | ||| 
Sbjct: 1033 atgctgctctcgccgccggggggcttgcggatcccaccaaggtagtcccgcgacggcgct 974

                                                        
Query: 366  tttccatcggagaatatgtcattgccgctcatctccttaagctt 409
            || || || | ||| |||||  ||||| |||||||||| |||||
Sbjct: 973  ttgccgtccgcgaagatgtcgctgccggtcatctccttcagctt 930
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>ref|NM_127793.3| Arabidopsis thaliana unknown protein AT2G22270 mRNA, complete cds
          Length = 1243

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 305  aatgctgctctcgccaccagg 325
            |||||||||||||||||||||
Sbjct: 1046 aatgctgctctcgccaccagg 1026
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>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete
             sequence
          Length = 137709

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 303   gcaatgctgctctcgccaccagggggctt 331
             ||||||||||||||||| ||||| |||||
Sbjct: 36439 gcaatgctgctctcgccgccaggaggctt 36467
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 303      gcaatgctgctctcgccaccagggggctt 331
                ||||||||||||||||| ||||| |||||
Sbjct: 15300909 gcaatgctgctctcgccgccaggaggctt 15300881
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>emb|AL355980.6| Human DNA sequence from clone RP11-295L12 on chromosome 13, complete
             sequence
          Length = 191856

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 168   ttagggctaagatatccaaca 188
             |||||||||||||||||||||
Sbjct: 15425 ttagggctaagatatccaaca 15405
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>gb|AC007168.5| Arabidopsis thaliana chromosome 2 clone T26C19 map mi238, complete
             sequence
          Length = 81236

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 305   aatgctgctctcgccaccagg 325
             |||||||||||||||||||||
Sbjct: 27772 aatgctgctctcgccaccagg 27792
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 303      gcaatgctgctctcgccaccagggggctt 331
                ||||||||||||||||| ||||| |||||
Sbjct: 15295443 gcaatgctgctctcgccgccaggaggctt 15295415
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>gb|AC156807.2| Pan troglodytes BAC clone CH251-353P10 from chromosome unknown, complete
              sequence
          Length = 172466

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 309    ctgctctcgccaccagggggc 329
              |||||||||||||||||||||
Sbjct: 164660 ctgctctcgccaccagggggc 164680
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>gb|AY089019.1| Arabidopsis thaliana clone 17172 mRNA, complete sequence
          Length = 1226

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 305  aatgctgctctcgccaccagg 325
            |||||||||||||||||||||
Sbjct: 1033 aatgctgctctcgccaccagg 1013
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>dbj|AK101680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058I20, full
           insert sequence
          Length = 1135

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 303 gcaatgctgctctcgccaccagggggctt 331
           ||||||||||||||||| ||||| |||||
Sbjct: 902 gcaatgctgctctcgccgccaggaggctt 874
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>dbj|AK068724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161E13, full
           insert sequence
          Length = 1181

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 303 gcaatgctgctctcgccaccagggggctt 331
           ||||||||||||||||| ||||| |||||
Sbjct: 904 gcaatgctgctctcgccgccaggaggctt 876
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>dbj|AK060532.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A03, full
           insert sequence
          Length = 1307

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 303 gcaatgctgctctcgccaccagggggctt 331
           ||||||||||||||||| ||||| |||||
Sbjct: 923 gcaatgctgctctcgccgccaggaggctt 895
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>emb|AL109767.7|CNS018OX Human chromosome 14 DNA sequence BAC R-889B13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184039

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 309   ctgctctcgccaccagggggc 329
             |||||||||||||||||||||
Sbjct: 98956 ctgctctcgccaccagggggc 98936
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>emb|AL132819.6|CNS01DTO Human chromosome 14 DNA sequence BAC C-2200A16 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 140073

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 309    ctgctctcgccaccagggggc 329
              |||||||||||||||||||||
Sbjct: 123885 ctgctctcgccaccagggggc 123865


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,286,123
Number of Sequences: 3902068
Number of extensions: 3286123
Number of successful extensions: 51057
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50910
Number of HSP's gapped (non-prelim): 140
length of query: 442
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 420
effective length of database: 17,147,199,772
effective search space: 7201823904240
effective search space used: 7201823904240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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