ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart33h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK099032.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 3e-45
2dbj|AK058676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 3e-45
3emb|AJ245968.2|ZMA245968 Zea mays mRNA for Toc34-1 protein (toc3... 149 1e-32
4emb|AJ271049.1|ZMA271049 Zea mays mRNA for Toc34-2 protein (toc3... 149 1e-32
5gb|AY107292.1| Zea mays PCO067487 mRNA sequence 149 1e-32
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 115 1e-22
7gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare str... 115 1e-22
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
9gb|AC091602.6| Homo sapiens BAC clone RP11-655M19 from 4, comple... 44 0.45
10emb|BX855617.8| Zebrafish DNA sequence from clone DKEYP-123H10 i... 42 1.8
11dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.8
12gb|AC016019.4| Drosophila melanogaster clone BACR08P05, complete... 40 7.0
13gb|AY596295.1| Haloarcula marismortui ATCC 43049 plasmid pNG600,... 40 7.0
14gb|AC164296.2| Mus musculus BAC clone RP24-342N6 from chromosome... 40 7.0
15gb|AC098709.3| Mus musculus BAC clone RP23-1K14 from 1, complete... 40 7.0
16emb|BX004827.18| Human DNA sequence from clone RP13-391G2 on chr... 40 7.0
17emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on ch... 40 7.0
18emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4,... 40 7.0
19ref|NM_166403.1| Drosophila melanogaster CG9945-RB, transcript v... 40 7.0
20ref|NM_137650.2| Drosophila melanogaster CG9945-RA, transcript v... 40 7.0
21gb|AY075228.1| Drosophila melanogaster AT18160 full length cDNA 40 7.0
22gb|AC099765.1| Caenorhabditis briggsae cosmid CB031I14, complete... 40 7.0
23dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 40 7.0
24dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
25gb|AC009218.7|AC009218 Drosophila melanogaster, chromosome 2R, r... 40 7.0
26gb|AC007837.4|AC007837 Drosophila melanogaster, chromosome 2R, r... 40 7.0
27gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold 40 7.0
28gb|AC137591.1| Homo sapiens chromosome X clone XX-B6cos map Xp22... 40 7.0
29gb|AE003791.5| Drosophila melanogaster chromosome 2R, section 59... 40 7.0
30gb|AC141644.6| Mus musculus BAC clone RP23-115F21 from chromosom... 40 7.0
31gb|AC099712.21| Mus musculus chromosome 1, clone RP23-400C10, co... 40 7.0
32emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4,... 40 7.0
33emb|AL833781.5| Mouse DNA sequence from clone RP23-447J12 on chr... 40 7.0

>dbj|AK099032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128A13, full
            insert sequence
          Length = 1321

 Score =  190 bits (96), Expect = 3e-45
 Identities = 219/260 (84%)
 Strand = Plus / Minus

                                                                        
Query: 258  gctcaggccttagggttgcgggatgacgaaactttttggtctaccgggttaccgcttcca 317
            ||||| |||||  |||||| |||||| ||| |||| |||||||||||||    |||||||
Sbjct: 1115 gctcaagccttgcggttgccggatgatgaacctttctggtctaccgggtccttgcttcca 1056

                                                                        
Query: 318  accagatctctataacgctgctcccagtcatccagcttcccgttcgaaatgtcagaatga 377
            ||||  ||||| |||||||| ||||||||||| ||||||||||| || ||||||| ||||
Sbjct: 1055 accaagtctctgtaacgctgttcccagtcatctagcttcccgtttgatatgtcagcatga 996

                                                                        
Query: 378  atcgccctcctgattccttttaccacaaaaaagtactgcacagcaaggatgagaggtatg 437
            || ||||| | ||| |||||||| || |||||||||| |||   ||||||||| ||||||
Sbjct: 995  atggcccttcggatgccttttacaaccaaaaagtactccaccataaggatgagcggtatg 936

                                                                        
Query: 438  tacttcttccagcgattgttcggatttggaccgtcgattaacttctgatcaacatgaatg 497
             || |||||||||||||||| ||||||||||| || |||| ||| |||||||||||||||
Sbjct: 935  aacatcttccagcgattgttgggatttggaccatctattagcttttgatcaacatgaatg 876

                                
Query: 498  gacctgcttccatttgagac 517
            ||  |||| || ||||||||
Sbjct: 875  gatttgctcccgtttgagac 856



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>dbj|AK058676.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H08, full
            insert sequence
          Length = 1406

 Score =  190 bits (96), Expect = 3e-45
 Identities = 219/260 (84%)
 Strand = Plus / Minus

                                                                        
Query: 258  gctcaggccttagggttgcgggatgacgaaactttttggtctaccgggttaccgcttcca 317
            ||||| |||||  |||||| |||||| ||| |||| |||||||||||||    |||||||
Sbjct: 1192 gctcaagccttgcggttgccggatgatgaacctttctggtctaccgggtccttgcttcca 1133

                                                                        
Query: 318  accagatctctataacgctgctcccagtcatccagcttcccgttcgaaatgtcagaatga 377
            ||||  ||||| |||||||| ||||||||||| ||||||||||| || ||||||| ||||
Sbjct: 1132 accaagtctctgtaacgctgttcccagtcatctagcttcccgtttgatatgtcagcatga 1073

                                                                        
Query: 378  atcgccctcctgattccttttaccacaaaaaagtactgcacagcaaggatgagaggtatg 437
            || ||||| | ||| |||||||| || |||||||||| |||   ||||||||| ||||||
Sbjct: 1072 atggcccttcggatgccttttacaaccaaaaagtactccaccataaggatgagcggtatg 1013

                                                                        
Query: 438  tacttcttccagcgattgttcggatttggaccgtcgattaacttctgatcaacatgaatg 497
             || |||||||||||||||| ||||||||||| || |||| ||| |||||||||||||||
Sbjct: 1012 aacatcttccagcgattgttgggatttggaccatctattagcttttgatcaacatgaatg 953

                                
Query: 498  gacctgcttccatttgagac 517
            ||  |||| || ||||||||
Sbjct: 952  gatttgctcccgtttgagac 933



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>emb|AJ245968.2|ZMA245968 Zea mays mRNA for Toc34-1 protein (toc34A gene)
          Length = 1233

 Score =  149 bits (75), Expect = 1e-32
 Identities = 159/187 (85%)
 Strand = Plus / Minus

                                                                       
Query: 330 taacgctgctcccagtcatccagcttcccgttcgaaatgtcagaatgaatcgccctcctg 389
           |||||||||||||||||||||| |||||| || |  || || | ||| |||||||||| |
Sbjct: 997 taacgctgctcccagtcatccaccttcccatttgcgatatctgcatggatcgccctccgg 938

                                                                       
Query: 390 attccttttaccacaaaaaagtactgcacagcaaggatgagaggtatgtacttcttccag 449
           ||||||||||| || || ||||||| ||||||||| || |  |||||| || ||||||||
Sbjct: 937 attccttttactaccaagaagtactccacagcaagtataattggtatgaacatcttccag 878

                                                                       
Query: 450 cgattgttcggatttggaccgtcgattaacttctgatcaacatgaatggacctgcttcca 509
           |||||||| || |||||||| || ||||||||||||||||||||||||| | |||| || 
Sbjct: 877 cgattgttagggtttggaccatcaattaacttctgatcaacatgaatgggcttgctcccg 818

                  
Query: 510 tttgaga 516
           |||||||
Sbjct: 817 tttgaga 811



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>emb|AJ271049.1|ZMA271049 Zea mays mRNA for Toc34-2 protein (toc34B gene)
          Length = 1313

 Score =  149 bits (75), Expect = 1e-32
 Identities = 159/187 (85%)
 Strand = Plus / Minus

                                                                        
Query: 330  taacgctgctcccagtcatccagcttcccgttcgaaatgtcagaatgaatcgccctcctg 389
            |||||||||||||||||||| | ||||||||| |  || || | ||| |||||||||| |
Sbjct: 1043 taacgctgctcccagtcatctaccttcccgtttgcgatatctgcatggatcgccctccgg 984

                                                                        
Query: 390  attccttttaccacaaaaaagtactgcacagcaaggatgagaggtatgtacttcttccag 449
            |||||||||||||| || ||||||| |||||||||||| || |||||| ||  ||| | |
Sbjct: 983  attccttttaccaccaagaagtactccacagcaaggataagtggtatgaacaactttcgg 924

                                                                        
Query: 450  cgattgttcggatttggaccgtcgattaacttctgatcaacatgaatggacctgcttcca 509
            |||||||| || |||||||| || |||||||||||||||||||||||||  ||||| || 
Sbjct: 923  cgattgttagggtttggaccatcaattaacttctgatcaacatgaatgggactgctcccg 864

                   
Query: 510  tttgaga 516
            |||||||
Sbjct: 863  tttgaga 857



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>gb|AY107292.1| Zea mays PCO067487 mRNA sequence
          Length = 1391

 Score =  149 bits (75), Expect = 1e-32
 Identities = 159/187 (85%)
 Strand = Plus / Minus

                                                                        
Query: 330  taacgctgctcccagtcatccagcttcccgttcgaaatgtcagaatgaatcgccctcctg 389
            |||||||||||||||||||||| |||||| || |  || || | ||| |||||||||| |
Sbjct: 1086 taacgctgctcccagtcatccaccttcccatttgcgatatctgcatggatcgccctccgg 1027

                                                                        
Query: 390  attccttttaccacaaaaaagtactgcacagcaaggatgagaggtatgtacttcttccag 449
            ||||||||||| || || ||||||| ||||||||| || |  |||||| || ||||||||
Sbjct: 1026 attccttttactaccaagaagtactccacagcaagtataattggtatgaacatcttccag 967

                                                                        
Query: 450  cgattgttcggatttggaccgtcgattaacttctgatcaacatgaatggacctgcttcca 509
            |||||||| || |||||||| || ||||||||||||||||||||||||| | |||| || 
Sbjct: 966  cgattgttagggtttggaccatcaattaacttctgatcaacatgaatgggcttgctcccg 907

                   
Query: 510  tttgaga 516
            |||||||
Sbjct: 906  tttgaga 900



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  115 bits (58), Expect = 1e-22
 Identities = 133/158 (84%)
 Strand = Plus / Plus

                                                                           
Query: 258     gctcaggccttagggttgcgggatgacgaaactttttggtctaccgggttaccgcttcca 317
               ||||| |||||  |||||| |||||| ||| |||| |||||||||||||    |||||||
Sbjct: 7403871 gctcaagccttgcggttgccggatgatgaacctttctggtctaccgggtccttgcttcca 7403930

                                                                           
Query: 318     accagatctctataacgctgctcccagtcatccagcttcccgttcgaaatgtcagaatga 377
               ||||  ||||| |||||||| ||||||||||| ||||||||||| || ||||||| ||||
Sbjct: 7403931 accaagtctctgtaacgctgttcccagtcatctagcttcccgtttgatatgtcagcatga 7403990

                                                     
Query: 378     atcgccctcctgattccttttaccacaaaaaagtactg 415
               || ||||| | ||| |||||||| || |||||||||||
Sbjct: 7403991 atggcccttcggatgccttttacaaccaaaaagtactg 7404028



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                           
Query: 422     aaggatgagaggtatgtacttcttccagcgattgttcggatttggaccgtcgattaactt 481
               ||||||||| |||||| || |||||||||||||||| ||||||||||| || |||| |||
Sbjct: 7404136 aaggatgagcggtatgaacatcttccagcgattgttgggatttggaccatctattagctt 7404195

                                                   
Query: 482     ctgatcaacatgaatggacctgcttccatttgagac 517
                |||||||||||||||||  |||| || ||||||||
Sbjct: 7404196 ttgatcaacatgaatggatttgctcccgtttgagac 7404231



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>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0071C04, from chromosome 3, complete sequence
          Length = 126078

 Score =  115 bits (58), Expect = 1e-22
 Identities = 133/158 (84%)
 Strand = Plus / Plus

                                                                         
Query: 258   gctcaggccttagggttgcgggatgacgaaactttttggtctaccgggttaccgcttcca 317
             ||||| |||||  |||||| |||||| ||| |||| |||||||||||||    |||||||
Sbjct: 42426 gctcaagccttgcggttgccggatgatgaacctttctggtctaccgggtccttgcttcca 42485

                                                                         
Query: 318   accagatctctataacgctgctcccagtcatccagcttcccgttcgaaatgtcagaatga 377
             ||||  ||||| |||||||| ||||||||||| ||||||||||| || ||||||| ||||
Sbjct: 42486 accaagtctctgtaacgctgttcccagtcatctagcttcccgtttgatatgtcagcatga 42545

                                                   
Query: 378   atcgccctcctgattccttttaccacaaaaaagtactg 415
             || ||||| | ||| |||||||| || |||||||||||
Sbjct: 42546 atggcccttcggatgccttttacaaccaaaaagtactg 42583



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                         
Query: 422   aaggatgagaggtatgtacttcttccagcgattgttcggatttggaccgtcgattaactt 481
             ||||||||| |||||| || |||||||||||||||| ||||||||||| || |||| |||
Sbjct: 42691 aaggatgagcggtatgaacatcttccagcgattgttgggatttggaccatctattagctt 42750

                                                 
Query: 482   ctgatcaacatgaatggacctgcttccatttgagac 517
              |||||||||||||||||  |||| || ||||||||
Sbjct: 42751 ttgatcaacatgaatggatttgctcccgtttgagac 42786



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  115 bits (58), Expect = 1e-22
 Identities = 133/158 (84%)
 Strand = Plus / Plus

                                                                           
Query: 258     gctcaggccttagggttgcgggatgacgaaactttttggtctaccgggttaccgcttcca 317
               ||||| |||||  |||||| |||||| ||| |||| |||||||||||||    |||||||
Sbjct: 7401706 gctcaagccttgcggttgccggatgatgaacctttctggtctaccgggtccttgcttcca 7401765

                                                                           
Query: 318     accagatctctataacgctgctcccagtcatccagcttcccgttcgaaatgtcagaatga 377
               ||||  ||||| |||||||| ||||||||||| ||||||||||| || ||||||| ||||
Sbjct: 7401766 accaagtctctgtaacgctgttcccagtcatctagcttcccgtttgatatgtcagcatga 7401825

                                                     
Query: 378     atcgccctcctgattccttttaccacaaaaaagtactg 415
               || ||||| | ||| |||||||| || |||||||||||
Sbjct: 7401826 atggcccttcggatgccttttacaaccaaaaagtactg 7401863



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                           
Query: 422     aaggatgagaggtatgtacttcttccagcgattgttcggatttggaccgtcgattaactt 481
               ||||||||| |||||| || |||||||||||||||| ||||||||||| || |||| |||
Sbjct: 7401971 aaggatgagcggtatgaacatcttccagcgattgttgggatttggaccatctattagctt 7402030

                                                   
Query: 482     ctgatcaacatgaatggacctgcttccatttgagac 517
                |||||||||||||||||  |||| || ||||||||
Sbjct: 7402031 ttgatcaacatgaatggatttgctcccgtttgagac 7402066



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>gb|AC091602.6| Homo sapiens BAC clone RP11-655M19 from 4, complete sequence
          Length = 189458

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 53    acaataacatttgcaaaattgc 74
             ||||||||||||||||||||||
Sbjct: 71550 acaataacatttgcaaaattgc 71571



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>emb|BX855617.8| Zebrafish DNA sequence from clone DKEYP-123H10 in linkage group 1,
              complete sequence
          Length = 160094

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 366    atgtcagaatgaatcgccctcctga 390
              |||||||||||||| ||||||||||
Sbjct: 120806 atgtcagaatgaatagccctcctga 120782



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>dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clone:RP13-259F12, complete
             sequence
          Length = 167444

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 190   aacaaaagaacagcacaggaa 210
             |||||||||||||||||||||
Sbjct: 37484 aacaaaagaacagcacaggaa 37464



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>gb|AC016019.4| Drosophila melanogaster clone BACR08P05, complete sequence
          Length = 192157

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 444    ttccagcgattgttcggatt 463
              ||||||||||||||||||||
Sbjct: 158630 ttccagcgattgttcggatt 158649



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>gb|AY596295.1| Haloarcula marismortui ATCC 43049 plasmid pNG600, complete sequence
          Length = 155300

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   atcgccctcctgattccttt 397
             ||||||||||||||||||||
Sbjct: 47892 atcgccctcctgattccttt 47873



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>gb|AC164296.2| Mus musculus BAC clone RP24-342N6 from chromosome 16, complete sequence
          Length = 206816

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    tcacaacaataacatttgcaaaat 71
             ||||| ||||||||||||||||||
Sbjct: 42244 tcacaccaataacatttgcaaaat 42267



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>gb|AC098709.3| Mus musculus BAC clone RP23-1K14 from 1, complete sequence
          Length = 189774

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   aggtatgtacttcttccagc 450
             ||||||||||||||||||||
Sbjct: 45323 aggtatgtacttcttccagc 45342



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>emb|BX004827.18| Human DNA sequence from clone RP13-391G2 on chromosome X Contains the
             SHOX gene for short stature homeobox and seven CpG
             islands, complete sequence
          Length = 119555

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aataacatttgcaaaattgc 74
             ||||||||||||||||||||
Sbjct: 47868 aataacatttgcaaaattgc 47849



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>emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on chromosome X Contains the 5'
              end of the gene for protein phosphatase 2A 48 kDa
              regulatory subunit (PR48), a fatty acid binding protein 5
              (psoriasis-associated) (FABP5) pseudogene, a pseudogene
              similar to part of keratin 18 (KRT18) and nine CpG islands,
              complete sequence
          Length = 218723

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     aataacatttgcaaaattgc 74
              ||||||||||||||||||||
Sbjct: 213413 aataacatttgcaaaattgc 213394



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>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02,
             complete sequence
          Length = 139080

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    aacacaataaattcaaataa 36
             ||||||||||||||||||||
Sbjct: 92157 aacacaataaattcaaataa 92176



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>ref|NM_166403.1| Drosophila melanogaster CG9945-RB, transcript variant B (CG9945),
           mRNA
          Length = 2075

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 444 ttccagcgattgttcggatt 463
           ||||||||||||||||||||
Sbjct: 454 ttccagcgattgttcggatt 435



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>ref|NM_137650.2| Drosophila melanogaster CG9945-RA, transcript variant A (CG9945),
           mRNA
          Length = 1996

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 444 ttccagcgattgttcggatt 463
           ||||||||||||||||||||
Sbjct: 454 ttccagcgattgttcggatt 435



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>gb|AY075228.1| Drosophila melanogaster AT18160 full length cDNA
          Length = 1949

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 444 ttccagcgattgttcggatt 463
           ||||||||||||||||||||
Sbjct: 454 ttccagcgattgttcggatt 435



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>gb|AC099765.1| Caenorhabditis briggsae cosmid CB031I14, complete sequence
          Length = 94665

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  ggagcaacaaaagaacagca 204
            ||||||||||||||||||||
Sbjct: 5473 ggagcaacaaaagaacagca 5454



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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete
               genome
          Length = 2516575

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      cacaataaattcaaataact 38
               ||||||||||||||||||||
Sbjct: 1808830 cacaataaattcaaataact 1808849



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 17       aacacaataaattcaaataa 36
                ||||||||||||||||||||
Sbjct: 25874747 aacacaataaattcaaataa 25874766



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>gb|AC009218.7|AC009218 Drosophila melanogaster, chromosome 2R, region 57B-57B, BAC clone
             BACR33D17, complete sequence
          Length = 156753

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   ttccagcgattgttcggatt 463
             ||||||||||||||||||||
Sbjct: 62064 ttccagcgattgttcggatt 62045



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>gb|AC007837.4|AC007837 Drosophila melanogaster, chromosome 2R, region 57B2-B3, BAC clone
             BACR04I07, complete sequence
          Length = 123647

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   ttccagcgattgttcggatt 463
             ||||||||||||||||||||
Sbjct: 28958 ttccagcgattgttcggatt 28939



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>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold
          Length = 1787293

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 13      aggcaacacaataaattcaaataactgt 40
               ||||||||||| |||| |||||||||||
Sbjct: 1699079 aggcaacacaacaaatgcaaataactgt 1699106



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>gb|AC137591.1| Homo sapiens chromosome X clone XX-B6cos map Xp22-PAR, complete
            sequence
          Length = 32799

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   aataacatttgcaaaattgc 74
            ||||||||||||||||||||
Sbjct: 1150 aataacatttgcaaaattgc 1131



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>gb|AE003791.5| Drosophila melanogaster chromosome 2R, section 59 of 73 of the complete
              sequence
          Length = 263535

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 444    ttccagcgattgttcggatt 463
              ||||||||||||||||||||
Sbjct: 104906 ttccagcgattgttcggatt 104887



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>gb|AC141644.6| Mus musculus BAC clone RP23-115F21 from chromosome 6, complete sequence
          Length = 187643

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    acaataacatttgcaaaatt 72
             ||||||||||||||||||||
Sbjct: 60437 acaataacatttgcaaaatt 60456



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>gb|AC099712.21| Mus musculus chromosome 1, clone RP23-400C10, complete sequence
          Length = 196059

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 431   aggtatgtacttcttccagc 450
             ||||||||||||||||||||
Sbjct: 46662 aggtatgtacttcttccagc 46643



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>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13,
            complete sequence
          Length = 139226

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   aacacaataaattcaaataa 36
            ||||||||||||||||||||
Sbjct: 1009 aacacaataaattcaaataa 1028



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>emb|AL833781.5| Mouse DNA sequence from clone RP23-447J12 on chromosome 4, complete
             sequence
          Length = 165700

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   ttgtccctgagagctctata 156
             ||||||||||||||||||||
Sbjct: 20041 ttgtccctgagagctctata 20060


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,367,574
Number of Sequences: 3902068
Number of extensions: 4367574
Number of successful extensions: 91190
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91040
Number of HSP's gapped (non-prelim): 142
length of query: 517
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 494
effective length of database: 17,143,297,704
effective search space: 8468789065776
effective search space used: 8468789065776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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