ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart33g10 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 214 bits (545), Expect = 4e-56 Identities = 96/104 (92%), Positives = 100/104 (96%) Frame = -3 Query: 406 HVGRALATGIFERVHVRTYESDNGCNQNFGWEGSWNEWTAAYPATRFYVGLTADDKSYQW 227 HVGRALATGIFERVHVRTYESD CNQN GWEGSW++WTAAYPATRFYVGLTADDKS+QW Sbjct: 201 HVGRALATGIFERVHVRTYESDKWCNQNLGWEGSWDKWTAAYPATRFYVGLTADDKSHQW 260 Query: 226 VHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 95 VHPKNVYY VAPV+QKKDNYGGIMLWDRYFDKQTNYSSLIKYYA Sbjct: 261 VHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 304
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 97.4 bits (241), Expect = 7e-21 Identities = 50/107 (46%), Positives = 65/107 (60%), Gaps = 6/107 (5%) Frame = -3 Query: 397 RALATGIFERVHVRTYESDNGCNQNF----GWEGSWNEWTAAYPATRFYVGLTADDK--S 236 +AL T +FER+HVR Y+ D C+ N G WN+WTA YP + Y+GL A + Sbjct: 199 KALDTKLFERIHVRFYD-DATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGK 257 Query: 235 YQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 95 V K +YY + P QK NYGGIMLWDR++DKQT Y +KY+A Sbjct: 258 NDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 85.1 bits (209), Expect = 4e-17 Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 1/95 (1%) Frame = -3 Query: 397 RALATGIFERVHVRTYESDNGCNQNFGWEGSWNEWTAAYPATRFYVGLTAD-DKSYQWVH 221 +ALATG+F R+HVR + D C + + SW +W AA+P ++ Y+GL A ++ W+ Sbjct: 196 KALATGVFARIHVRMF-GDEQCTMSPRY--SWEKWAAAFPGSKVYIGLVASPEQDSAWMF 252 Query: 220 PKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYS 116 K++YY + + NYGG+ ++DRYFDK+ NY+ Sbjct: 253 QKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 67.0 bits (162), Expect = 1e-11 Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 6/105 (5%) Frame = -3 Query: 400 GRALATGIFERVHVRTYESDNGCNQNFGWEG----SWNEWTAAYPATRFYVGLTADDKSY 233 G AL TG+F+ V V+ Y + C + G SWN WT++ +T ++GL A + Sbjct: 195 GTALNTGLFDYVWVQFYNNPP-CQYSSGNTNNLLNSWNRWTSSINSTGSFMGLPASSAAA 253 Query: 232 -QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 104 + P NV S + PV ++ YGG+MLW +Y+D Q+ YSS IK Sbjct: 254 GRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIK 298
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 61.6 bits (148), Expect = 4e-10 Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 6/106 (5%) Frame = -3 Query: 406 HVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEWTAAYPATRFYVGLTADDK 239 ++G AL TG+F+ V V+ Y + C + G SWN WT + A + ++GL A + Sbjct: 191 YLGTALNTGLFDYVWVQFYNNPP-CQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPE 249 Query: 238 SYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 107 + +V P + + P +K YGG+MLW +++D + YSS I Sbjct: 250 AAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSSSI 295
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 61.6 bits (148), Expect = 4e-10 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 9/106 (8%) Frame = -3 Query: 394 ALATGIFERVHVRTYESDN----GCNQNFGWEGSWNEWTAAYPATRFYVGL----TADDK 239 AL TG+F+ V V+ Y + ++NF + WN+WT+ PA + Y+GL TA Sbjct: 192 ALQTGLFDYVWVQFYNNPECEFMSNSENF--KRRWNQWTSI-PAKKLYIGLPAAKTAAGN 248 Query: 238 SYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 104 Y PK V S V P + YGG+MLW+R FD Q YSS I+ Sbjct: 249 GYI---PKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSSAIR 291
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 60.1 bits (144), Expect = 1e-09 Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 7/106 (6%) Frame = -3 Query: 403 VGRALATGIFERVHVRTYES-----DNGCNQNFGWEGSWNEWTAAYPATRFYVGLTADDK 239 +G AL T F+ V ++ Y + +G QN SWN+WT + A +F++GL A + Sbjct: 195 MGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLF--DSWNKWTTSIAAQKFFLGLPAAPE 252 Query: 238 SYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 107 + ++ P + + P +K YGG+MLW +++D + YSS I Sbjct: 253 AAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSI 298
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 59.3 bits (142), Expect = 2e-09 Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 8/109 (7%) Frame = -3 Query: 406 HVGRALATGIFERVHVRTYES-----DNGCNQNFGWEGSWNEWTAAYPATRFYVGLTADD 242 H+ A+ TG+F+ V V+ Y + NG N +WN+WT++ A + ++G+ A D Sbjct: 185 HLDSAIQTGLFDYVWVQFYNNPQCQYSNGNINNL--VNAWNQWTSSQ-AKQVFLGVPASD 241 Query: 241 KSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 104 + + P +V S V P + YGG+M+WDR+ D Q+ YS+ IK Sbjct: 242 AAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSNAIK 290
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 57.8 bits (138), Expect = 6e-09 Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 9/110 (8%) Frame = -3 Query: 406 HVGRALATGIFERVHVRTYES------DNGCNQNFGWEGSWNEWTAAYPATRFYVGLTAD 245 H+ A+ TG+F+ V V+ Y + DN N SWN+WTA +P ++ Y+GL A Sbjct: 186 HLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLL----SSWNQWTA-FPTSKLYMGLPAA 240 Query: 244 DKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 104 ++ P +V S V P + NYGG+MLW + FD YS IK Sbjct: 241 REAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD--NGYSDSIK 288
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 54.7 bits (130), Expect = 5e-08 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%) Frame = -3 Query: 406 HVGRALATGIFERVHVRTYESDNGCNQNFGWEG----SWNEWTAAYPATRFYVGLTADDK 239 H+ A+ TG+F+ V V+ Y + C + G SWN+WT++ A + ++G+ A Sbjct: 191 HLDTAIKTGLFDIVWVQFYNNPP-CQYSSGNTNDLISSWNQWTSSQ-AKQLFLGVPASTA 248 Query: 238 SY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 107 + P +V S V P + YGG+MLWDR+ D Q+ YS I Sbjct: 249 AAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAI 294
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 48.9 bits (115), Expect = 3e-06 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 5/102 (4%) Frame = -3 Query: 394 ALATGIFERVHVRTYESDNGCNQNFGWEG---SWNEWTAAYPATRFYVGLTAD-DKSYQW 227 A+ATG+F+ V V+ Y + C + + SWN+WT A + ++GL A D + Sbjct: 193 AIATGLFDYVWVQFYNNPP-CQYDTSADNLLSSWNQWTTVQ-ANQIFLGLPASTDAAGSG 250 Query: 226 VHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 104 P + S V P + YGG+MLW + +D + YSS IK Sbjct: 251 FIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSSAIK 290
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 48.5 bits (114), Expect = 4e-06 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 6/103 (5%) Frame = -3 Query: 394 ALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEWTAAYPATRFYVGL-TADDKSYQ 230 AL+TG+F+ V V+ Y + C + G + WN+W A A + ++GL A + Sbjct: 190 ALSTGLFDYVWVQFYNNPP-CQYSGGSADNLKNYWNQWNAIQ-AGKIFLGLPAAQGAAGS 247 Query: 229 WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 104 P +V S V P+ YGG+MLW +++D YSS IK Sbjct: 248 GFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSSAIK 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 41.2 bits (95), Expect = 6e-04 Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 11/113 (9%) Frame = -3 Query: 406 HVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEWT-AAYPATR-FYVGLTAD 245 ++ A+ T F+ + VR Y +D C + G +W WT + YP + ++ L A Sbjct: 196 YLDNAIQTRHFDYIFVRFY-NDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPAS 254 Query: 244 DKSYQ---WVHPKNVYYSVAP-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 101 + ++ P + V P + + Y GI LW+R DK+T YS ++I+Y Sbjct: 255 QATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>NIRB_KLEOX (Q06458) Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)| Length = 957 Score = 30.4 bits (67), Expect = 1.0 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -3 Query: 259 GLTADDKSYQWVH-PKNVYYSVAPVSQKKDNYGGIMLWD 146 G T +SYQW H P+ VY + + K+ GG+++ D Sbjct: 336 GRTPGCQSYQWTHGPQQVYKKIVVSADGKNLLGGVLVGD 374
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 28.9 bits (63), Expect = 3.0 Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 8/94 (8%) Frame = -3 Query: 403 VGRALATGIFERVHVRTYE---SDNGCNQNFGWEGSWNEWTAAYPATRFYVGL----TAD 245 +G L + F+ V+V+ Y S G + NF +W + T+ + + TA Sbjct: 203 LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVKIMFTVPGSSTAA 262 Query: 244 DKSYQWVHPKNVYYSVAP-VSQKKDNYGGIMLWD 146 Y P + ++ P ++ K +YGG+ +WD Sbjct: 263 GSGYV---PMSTLQTIVPSLASKYSSYGGVSVWD 293
>G6PI_NEUCR (Q7S986) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 561 Score = 28.9 bits (63), Expect = 3.0 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -3 Query: 322 FGWE----GSWNEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIM 155 FG+E G ++ W+A + YVG K H + ++ AP+ + GGI+ Sbjct: 276 FGFESWVGGRYSVWSAIGLSVALYVGYENFHKFLAGAHAMDNHFRTAPLKENIPVLGGIL 335 Query: 154 -LW-DRYFDKQTN 122 +W +++ QT+ Sbjct: 336 SVWYSNFYNAQTH 348
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 8/94 (8%) Frame = -3 Query: 403 VGRALATGIFERVHVRTYE---SDNGCNQNFGWEGSWNEWTAAYPATRFYVGL----TAD 245 +G L + F+ V+V+ Y S G + NF +W + T+ + + TA Sbjct: 203 LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVKIMFTIPGSPTAA 262 Query: 244 DKSYQWVHPKNVYYSVAP-VSQKKDNYGGIMLWD 146 Y P + ++ P ++ + +YGG+ +WD Sbjct: 263 GSGYV---PMSTLQTIVPSLASEYSSYGGVSVWD 293
>HYAL1_MOUSE (Q91ZJ9) Hyaluronidase-1 precursor (EC 3.2.1.35) (Hyal-1)| (Hyaluronoglucosaminidase-1) Length = 462 Score = 27.3 bits (59), Expect = 8.9 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Frame = -3 Query: 331 NQNFGWEGSWNEWTAAYPATRFYVGLTADDKSYQWV-HPKNVYYSVAPVSQKKDNYGGIM 155 N GW WN+ A YP+ L KS +V H VA VS +D + +M Sbjct: 257 NDQLGW--LWNQSYALYPSIYLPAALMGTGKSQMYVRHRVQEALRVAIVS--RDPHVPVM 312 Query: 154 LWDRYFDKQTNY 119 + + F + T+Y Sbjct: 313 PYVQIFYEMTDY 324
>PIMT_GEOSL (Q74CZ5) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)| (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) Length = 207 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = -2 Query: 251 GGRQVLPVGTPQERLLQRRAGVAEEGQLRRHHALG 147 GGR V+PVGT E++L R E+G + R + G Sbjct: 158 GGRLVIPVGTQFEQVLV-RVVKQEDGSVERENITG 191
>3HAO_RAT (P46953) 3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6)| (3-HAO) (3-hydroxyanthranilic acid dioxygenase) (3-hydroxyanthranilate oxygenase) Length = 286 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -3 Query: 271 RFYVGLTADDKSYQWVHPKNVYYSVAPVSQK 179 R+YVG T D +W H K++ +AP+ Q+ Sbjct: 117 RYYVGDTEDVLFEKWFHCKDLGTQLAPIIQE 147
>3HAO_MOUSE (Q78JT3) 3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6)| (3-HAO) (3-hydroxyanthranilic acid dioxygenase) (3-hydroxyanthranilate oxygenase) Length = 286 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -3 Query: 271 RFYVGLTADDKSYQWVHPKNVYYSVAPVSQK 179 R+YVG T D +W H K++ +AP+ Q+ Sbjct: 117 RYYVGDTEDVLFEKWFHCKDLGTQLAPIIQE 147
>MOK11_SCHPO (Q09854) Cell wall alpha-1,3-glucan synthase mok11 (EC 2.4.1.183)| Length = 2397 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 24/81 (29%) Frame = -3 Query: 358 RTYESDNG-CN-------QNFGWEGS------WNEWTAA----------YPATRFYVGLT 251 +TY+ +N CN +GW+G W+E T + YP R++ + Sbjct: 894 QTYDGNNTYCNLSGWSQSSRYGWKGHHIMVQYWSELTGSSNYMQESDLEYPYKRWFPHVF 953 Query: 250 ADDKSYQWVHPKNVYYSVAPV 188 D QW H ++ + P+ Sbjct: 954 MDSDYTQWTHDSDIRNRMLPL 974
>NUOJ_SHIFL (P0AFE3) NADH-quinone oxidoreductase chain J (EC 1.6.99.5) (NADH| dehydrogenase I, chain J) (NDH-1, chain J) (NUO10) Length = 184 Score = 27.3 bits (59), Expect = 8.9 Identities = 7/13 (53%), Positives = 13/13 (100%) Frame = -2 Query: 350 RERQWVQPELWVG 312 +ERQW++P++W+G Sbjct: 83 QERQWLKPQVWIG 95
>NUOJ_ECOLI (P0AFE0) NADH-quinone oxidoreductase chain J (EC 1.6.99.5) (NADH| dehydrogenase I, chain J) (NDH-1, chain J) (NUO10) Length = 184 Score = 27.3 bits (59), Expect = 8.9 Identities = 7/13 (53%), Positives = 13/13 (100%) Frame = -2 Query: 350 RERQWVQPELWVG 312 +ERQW++P++W+G Sbjct: 83 QERQWLKPQVWIG 95
>NUOJ_ECOL6 (P0AFE1) NADH-quinone oxidoreductase chain J (EC 1.6.99.5) (NADH| dehydrogenase I, chain J) (NDH-1, chain J) (NUO10) Length = 184 Score = 27.3 bits (59), Expect = 8.9 Identities = 7/13 (53%), Positives = 13/13 (100%) Frame = -2 Query: 350 RERQWVQPELWVG 312 +ERQW++P++W+G Sbjct: 83 QERQWLKPQVWIG 95
>NUOJ_ECO57 (P0AFE2) NADH-quinone oxidoreductase chain J (EC 1.6.99.5) (NADH| dehydrogenase I, chain J) (NDH-1, chain J) (NUO10) Length = 184 Score = 27.3 bits (59), Expect = 8.9 Identities = 7/13 (53%), Positives = 13/13 (100%) Frame = -2 Query: 350 RERQWVQPELWVG 312 +ERQW++P++W+G Sbjct: 83 QERQWLKPQVWIG 95 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,999,087 Number of Sequences: 219361 Number of extensions: 817547 Number of successful extensions: 2477 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2405 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2463 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
