ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart33g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inh... 533 e-148
2dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhi... 305 6e-80
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
4dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
5gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 56 9e-05
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
7dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
8dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
9gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 56 9e-05
10dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for ch... 56 9e-05
11dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homolo... 56 9e-05
12dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homolo... 56 9e-05
13dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homolo... 56 9e-05
14dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homolo... 56 9e-05
15dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homolo... 56 9e-05
16dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for ... 56 9e-05
17dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
18dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
19dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
20dbj|AK106319.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
21dbj|D55710.1| Oryza sativa (japonica cultivar-group) mRNA for ch... 50 0.006
22ref|NM_193094.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.022
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
24dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.022
25dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
26ref|XM_792322.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.35
27gb|S82314.1| PRm 3=chitinase {clone CHEM 5} [Zea mays=maize, cv.... 44 0.35
28gb|AY107125.1| Zea mays PCO125117 mRNA sequence 44 0.35
29gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.4
30dbj|AK102731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
31dbj|AK064356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
32dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
33gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
34ref|XM_323898.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.5
35ref|XM_950893.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.5
36emb|AL845544.11| Zebrafish DNA sequence from clone BUSM1-133F4 i... 40 5.5
37dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
39dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DN... 40 5.5
40dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.5
41dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
42dbj|AK073843.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
43dbj|AK070219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
44gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 5.5 
>emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inhibitor protein I (xipI gene)
          Length = 915

 Score =  533 bits (269), Expect = e-148
 Identities = 305/317 (96%)
 Strand = Plus / Minus

                                                                       
Query: 92  tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtccca 151
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 915 tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtatcggtccca 856

                                                                       
Query: 152 gagcatgatgccgccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagac 211
           ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 855 gagcatgatgccgccgtagttgtccttcttctgcgccaccggcgcgacgccgtagtagac 796

                                                                       
Query: 212 gttcttggggtgtacccactggtaggacttgtcgtccgccgtgagcccgacgtagaaccg 271
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 795 gttcttggggtgtacccactggtgggacttgtcgtccgccgtgagcccgacgtagaaccg 736

                                                                       
Query: 272 ggtggcagggtacgccgccgtccactcgttccacgagccctcccacccaaagttctggtt 331
           |||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 735 ggtggccgggtacgccgccgtccacttgtcccacgagccctcccacccaaggttctggtt 676

                                                                       
Query: 332 gcacccattgtcgctctcgtatgtcctcacgtggacgcgctcgaagatccccgtcgccag 391
           |||||  |||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 675 gcaccacttgtcgctctcgtaggtcctcacgtgggcgcgctcgaagatccccgtcgccag 616

                            
Query: 392 cgcccgccccacgtgcg 408
           |||||||||||||||||
Sbjct: 615 cgcccgccccacgtgcg 599
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>dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhibitor XIP-III,
           complete cds
          Length = 934

 Score =  305 bits (154), Expect = 6e-80
 Identities = 279/320 (87%), Gaps = 3/320 (0%)
 Strand = Plus / Minus

                                                                       
Query: 92  tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtccca 151
           ||||||||||||||||||  |||| ||||||| | |||||||||||||||| ||||||||
Sbjct: 932 tcaggcgtagtacttgatgtagctactgtagtcgctctgcttgtcgaagtatcggtccca 873

                                                                       
Query: 152 gagcatgatgccgccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagac 211
           ||||||||  ||||||||||||||||||||||||  |||||||| || || |||||||||
Sbjct: 872 gagcatgaccccgccgtagttgtccttcttctgcaccaccggcgtgatgccgtagtagac 813

                                                                       
Query: 212 gttcttggggtgtacccactggtaggacttgtcgtccgccgtgagcccgacgtagaaccg 271
           |||||||||||||| ||||||||| ||||| ||||| || |||||||||| | |||||||
Sbjct: 812 gttcttggggtgtatccactggtacgacttctcgtcggcggtgagcccgatgaagaaccg 753

                                                                       
Query: 272 ggtggcagggtacgccgccgtccactcgttccacgagccctcccacccaaagttctggtt 331
           |||||| ||||||||||||||||||  || |||||   |||||||| |   || ||||||
Sbjct: 752 ggtggccgggtacgccgccgtccacctgtcccacgcctcctcccacgccccgtactggtt 693

                                                                       
Query: 332 gcacccattgtcgct---ctcgtatgtcctcacgtggacgcgctcgaagatccccgtcgc 388
           |||| | ||||||||   ||||||  |||||||||| |||||||| ||||||||||||||
Sbjct: 692 gcacgccttgtcgctctcctcgtagatcctcacgtgcacgcgctccaagatccccgtcgc 633

                               
Query: 389 cagcgcccgccccacgtgcg 408
           ||||||||||||||||||||
Sbjct: 632 cagcgcccgccccacgtgcg 613
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  101 bits (51), Expect = 2e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                            
Query: 104      cttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtcccagagcatgatgcc 163
                ||||| || |||| |||||||| || |||||||| |||| |||||||||| ||||| |||
Sbjct: 14484656 cttgaccatgctggtgtagttgctcagcttgtcgtagtatcggtcccagatcatgaagcc 14484715

                                                                            
Query: 164      gccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagacgttcttggggtg 223
                |||||||||||||  ||||||||    ||| ||||||  |||||||||||||||||||||
Sbjct: 14484716 gccgtagttgtccgccttctgcgtggacggggcgacgtcgtagtagacgttcttggggtg 14484775

                       
Query: 224      tacccac 230
                 ||||||
Sbjct: 14484776 cacccac 14484782



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 362      gtggacgcgctcgaagatccccgtcgcca 390
                ||||| |||||||||||||||||||||||
Sbjct: 14490211 gtggatgcgctcgaagatccccgtcgcca 14490239



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 261      acgtagaaccgggtggcagggtacgccgccgtc 293
                ||||||||||| || || |||||||||||||||
Sbjct: 14484813 acgtagaaccgtgtcgccgggtacgccgccgtc 14484845
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>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021M10
          Length = 163416

 Score =  101 bits (51), Expect = 2e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                         
Query: 104   cttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtcccagagcatgatgcc 163
             ||||| || |||| |||||||| || |||||||| |||| |||||||||| ||||| |||
Sbjct: 77830 cttgaccatgctggtgtagttgctcagcttgtcgtagtatcggtcccagatcatgaagcc 77889

                                                                         
Query: 164   gccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagacgttcttggggtg 223
             |||||||||||||  ||||||||    ||| ||||||  |||||||||||||||||||||
Sbjct: 77890 gccgtagttgtccgccttctgcgtggacggggcgacgtcgtagtagacgttcttggggtg 77949

                    
Query: 224   tacccac 230
              ||||||
Sbjct: 77950 cacccac 77956



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 362   gtggacgcgctcgaagatccccgtcgcca 390
             ||||| |||||||||||||||||||||||
Sbjct: 83385 gtggatgcgctcgaagatccccgtcgcca 83413



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 261   acgtagaaccgggtggcagggtacgccgccgtc 293
             ||||||||||| || || |||||||||||||||
Sbjct: 77987 acgtagaaccgtgtcgccgggtacgccgccgtc 78019
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>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0022E16 map C481S, complete sequence
          Length = 179668

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 125   ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
             ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 82293 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 82246



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 131   cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
             ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 88121 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 88163



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 355   tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 395
             |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 64128 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 64088



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 133   tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
             |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 83663 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 83703



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 355   tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 395
             ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 58277 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 58237
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 125      ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
                ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 28123738 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 28123691



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 131      cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
                ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 28129566 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 28129608



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 355      tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 395
                |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 28105573 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 28105533



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 133      tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
                |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 28125108 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 28125148



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 355      tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 395
                ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 28099010 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 28098970
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>dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111J19, full
           insert sequence
          Length = 1176

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 988 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 941
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>dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E01, full
           insert sequence
          Length = 1234

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 989 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 942
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 125      ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
                ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 28108616 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 28108569



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 131      cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
                ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 28114444 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 28114486



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 355      tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 395
                |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 28090451 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 28090411



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 133      tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
                |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 28109986 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 28110026



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 355      tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 395
                ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 28083888 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 28083848
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>dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete
           cds
          Length = 1220

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 963 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 916
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>dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C60571
          Length = 1220

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 975 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 928
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>dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C11701
          Length = 1171

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 933 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 886
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>dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C12269
          Length = 1214

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 973 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 926
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>dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C3540
          Length = 1229

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 972 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 925
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>dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds,clone:C10295
          Length = 1199

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 954 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 907
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>dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for class III chitinase
           homologue (OsChib3H-a)H-, complete cds, clone:C60129
          Length = 1187

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 957 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 910
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>dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101A20, full
           insert sequence
          Length = 1162

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 131 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 927 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 885
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>dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E14, full
           insert sequence
          Length = 1193

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 131 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 931 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 889
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>dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M21, full
           insert sequence
          Length = 1153

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 131 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 918 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 876
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>dbj|AK106319.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E05, full
           insert sequence
          Length = 1076

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 355 tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 395
           |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 695 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 655
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>dbj|D55710.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete
           cds
          Length = 1145

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 355 tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 395
           |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 673 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 633
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>ref|NM_193094.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 951

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 127 tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 186
           |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 916 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 857

                   
Query: 187 acaccggc 194
           || |||||
Sbjct: 856 actccggc 849



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 359 cacgtggacgcgctcgaagatccccgtcgccagcgcccgc 398
           |||||||||||||||||||   ||||| || |||||||||
Sbjct: 654 cacgtggacgcgctcgaaggcgcccgtggcgagcgcccgc 615
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                            
Query: 127      tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 186
                |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 26162477 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 26162418

                        
Query: 187      acaccggc 194
                || |||||
Sbjct: 26162417 actccggc 26162410



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 359      cacgtggacgcgctcgaagatccccgtcgccagcgcccgc 398
                |||||||||||||||||||   ||||| || |||||||||
Sbjct: 26162215 cacgtggacgcgctcgaaggcgcccgtggcgagcgcccgc 26162176
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>dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A01, full
           insert sequence
          Length = 1165

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 127 tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 186
           |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 964 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 905

                   
Query: 187 acaccggc 194
           || |||||
Sbjct: 904 actccggc 897



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 359 cacgtggacgcgctcgaagatccccgtcgccagcgcccgc 398
           |||||||||||||||||||   ||||| || |||||||||
Sbjct: 702 cacgtggacgcgctcgaaggcgcccgtggcgagcgcccgc 663
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>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0519E12
          Length = 152448

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 127   tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 186
             |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 54335 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 54276

                     
Query: 187   acaccggc 194
             || |||||
Sbjct: 54275 actccggc 54268



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 359   cacgtggacgcgctcgaagatccccgtcgccagcgcccgc 398
             |||||||||||||||||||   ||||| || |||||||||
Sbjct: 54073 cacgtggacgcgctcgaaggcgcccgtggcgagcgcccgc 54034
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>ref|XM_792322.1| PREDICTED: Strongylocentrotus purpuratus similar to putative
           endoplasmic reticulum protein, with at least 5
           transmembrane domains, of eukaryotic origin (56.3 kD)
           (4P439) (LOC592817), mRNA
          Length = 1917

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 114 ctgctgtagttggtctgcttgt 135
           ||||||||||||||||||||||
Sbjct: 86  ctgctgtagttggtctgcttgt 107
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>gb|S82314.1| PRm 3=chitinase {clone CHEM 5} [Zea mays=maize, cv. INRA 258,
           mercuric chloride-treated, leaves, mRNA Partial, 945 nt]
          Length = 945

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 144 cggtcccagagcatgatgccgccgtagttg 173
           |||||||| | |||||||||||||||||||
Sbjct: 870 cggtcccacaccatgatgccgccgtagttg 841
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>gb|AY107125.1| Zea mays PCO125117 mRNA sequence
          Length = 1252

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 144 cggtcccagagcatgatgccgccgtagttg 173
           |||||||| | |||||||||||||||||||
Sbjct: 928 cggtcccacaccatgatgccgccgtagttg 899
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 374    gaagatccccgtcgccagcgc 394
              |||||||||||||||||||||
Sbjct: 765298 gaagatccccgtcgccagcgc 765318
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>dbj|AK102731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105P15, full
           insert sequence
          Length = 1008

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 355 tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 395
           ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 612 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 572
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>dbj|AK064356.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B03, full
           insert sequence
          Length = 1150

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 355 tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 395
           ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 659 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 619
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>dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G04, full
           insert sequence
          Length = 1161

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 133 tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
           |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 940 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 900
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>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10,
             complete sequence
          Length = 181130

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 360   acgtggacgcgctcgaagatccccgtcgccagcgcc 395
             ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 94040 acgtggatgcggtggaagagccccgtcgccagcgcc 94005



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 360   acgtggacgcgctcgaagatccccgtcgccagcgcc 395
             ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 71656 acgtggatgcggtggaagagccccgtcgccagcgcc 71621
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>ref|XM_323898.1| Neurospora crassa OR74A hypothetical protein (NCU04546.1) partial
            mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  ccgtcgccagcgcccgcccc 401
            ||||||||||||||||||||
Sbjct: 1232 ccgtcgccagcgcccgcccc 1251
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>ref|XM_950893.1| Neurospora crassa OR74A hypothetical protein (NCU04546.1) partial
            mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  ccgtcgccagcgcccgcccc 401
            ||||||||||||||||||||
Sbjct: 1232 ccgtcgccagcgcccgcccc 1251
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>emb|AL845544.11| Zebrafish DNA sequence from clone BUSM1-133F4 in linkage group 7
             Contains three CpG islands, complete sequence
          Length = 110786

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    caatacatcagaatcaaatc 56
             ||||||||||||||||||||
Sbjct: 43424 caatacatcagaatcaaatc 43405
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 382      ccgtcgccagcgcccgcccc 401
                ||||||||||||||||||||
Sbjct: 20419457 ccgtcgccagcgcccgcccc 20419438
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 360     acgtggacgcgctcgaagatccccgtcgccagcgcc 395
               ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 8882115 acgtggatgcggtggaagagccccgtcgccagcgcc 8882080



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 360     acgtggacgcgctcgaagatccccgtcgccagcgcc 395
               ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 8859731 acgtggatgcggtggaagagccccgtcgccagcgcc 8859696
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>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence
          Length = 94287

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 152   gagcatgatgccgccgtagttgtccttc 179
             ||||||||||| |||| |||||||||||
Sbjct: 66383 gagcatgatgcggccggagttgtccttc 66356
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 180     ttctgcgacaccggcgcgac 199
               ||||||||||||||||||||
Sbjct: 5735197 ttctgcgacaccggcgcgac 5735178
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>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1531_B07
          Length = 115245

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   ccgtcgccagcgcccgcccc 401
             ||||||||||||||||||||
Sbjct: 47596 ccgtcgccagcgcccgcccc 47577
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>dbj|AK073843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H05, full
           insert sequence
          Length = 1152

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 360 acgtggacgcgctcgaagatccccgtcgccagcgcc 395
           ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 682 acgtggatgcggtggaagagccccgtcgccagcgcc 647
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>dbj|AK070219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043K12, full
           insert sequence
          Length = 2098

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 ccgtcgccagcgcccgcccc 401
           ||||||||||||||||||||
Sbjct: 233 ccgtcgccagcgcccgcccc 252
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 377     gatccccgtcgccagcgccc 396
               ||||||||||||||||||||
Sbjct: 1274939 gatccccgtcgccagcgccc 1274920


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,092,329
Number of Sequences: 3902068
Number of extensions: 2092329
Number of successful extensions: 37754
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37470
Number of HSP's gapped (non-prelim): 280
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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