ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart33g09 |
|---|---|
| Clone Library Name | barley_pub |
>ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-)| Length = 458 Score = 84.7 bits (208), Expect = 1e-16 Identities = 40/57 (70%), Positives = 46/57 (80%) Frame = -1 Query: 464 DDHYSCCPHNYPICNTKQGTCLAAKDSPLSVKAQRRTLAKPIGAFSGIAIDGKKGSA 294 DDHYSCCPH YPICN +QGTCL AKDSPL+VKA +RTLAKP +F + +GKK SA Sbjct: 404 DDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKPNLSF--LFGNGKKSSA 458
>CYSPL_LYCES (P20721) Low-temperature-induced cysteine proteinase precursor (EC| 3.4.22.-) (Fragment) Length = 346 Score = 80.1 bits (196), Expect = 3e-15 Identities = 35/57 (61%), Positives = 43/57 (75%) Frame = -1 Query: 464 DDHYSCCPHNYPICNTKQGTCLAAKDSPLSVKAQRRTLAKPIGAFSGIAIDGKKGSA 294 +DHYSCCPH+YPICN +QGTC +K +PL VKA +R LA+PIGAF GKK S+ Sbjct: 293 EDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGN---GGKKSSS 346
>ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-)| Length = 471 Score = 67.0 bits (162), Expect = 2e-11 Identities = 28/39 (71%), Positives = 34/39 (87%) Frame = -1 Query: 461 DHYSCCPHNYPICNTKQGTCLAAKDSPLSVKAQRRTLAK 345 DH SCCP +YP+CNT+ GTC A+K+SPLSVKA +RTLAK Sbjct: 423 DHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 461
>RD21A_ARATH (P43297) Cysteine proteinase RD21a precursor (EC 3.4.22.-) (RD21)| Length = 462 Score = 64.7 bits (156), Expect = 1e-10 Identities = 26/41 (63%), Positives = 32/41 (78%) Frame = -1 Query: 464 DDHYSCCPHNYPICNTKQGTCLAAKDSPLSVKAQRRTLAKP 342 DD+YSCCPH YP+C+ QGTCL +K+SP SVKA +R A P Sbjct: 412 DDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATP 452
>CYSP1_ORYSA (Q7XR52) Cysteine protease 1 precursor (EC 3.4.22.-) (OsCP1)| Length = 490 Score = 45.1 bits (105), Expect = 9e-05 Identities = 15/31 (48%), Positives = 22/31 (70%) Frame = -1 Query: 461 DHYSCCPHNYPICNTKQGTCLAAKDSPLSVK 369 DH +CCP YP+CN K TC +K+SP +++ Sbjct: 433 DHSTCCPKEYPVCNAKARTCSKSKNSPYNIR 463
>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)| Length = 4289 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 6/59 (10%) Frame = +2 Query: 299 CP-SCRQL-QCQRKHL*AWPGYASEPSLTVGCPWPRG----TFPAWCCRWDSYEGSSCS 457 CP C Q +C+ PGY E T CPW G C W Y G CS Sbjct: 311 CPRGCSQRGRCKDGRCVCDPGYTGEDCGTRSCPWDCGEGGRCVDGRCVCWPGYTGEDCS 369
>AT1A1_OREMO (Q9YH26) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1023 Score = 30.8 bits (68), Expect = 1.8 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K +WWFC P +L Sbjct: 971 CPGMDVALRMYPMKPLWWFCAFPYSLL 997
>PO2F2_MOUSE (Q00196) POU domain, class 2, transcription factor 2| (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2) Length = 462 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -3 Query: 330 LWHCN*RQEGQRVNICITAFVQPTAMVINFCK*SPGDPRSKAQH 199 +W CN RQ+ +R+N C A + P SPG P S + H Sbjct: 326 VWFCNRRQKEKRINPCSAAPMLP----------SPGKPTSYSPH 359
>PO2F2_PIG (Q29013) POU domain, class 2, transcription factor 2| (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2) Length = 478 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -3 Query: 330 LWHCN*RQEGQRVNICITAFVQPTAMVINFCK*SPGDPRSKAQH 199 +W CN RQ+ +R+N C A + P SPG P S + H Sbjct: 343 VWFCNRRQKEKRINPCSAAPMLP----------SPGKPASYSPH 376
>PO2F2_HUMAN (P09086) POU domain, class 2, transcription factor 2| (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2) Length = 478 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -3 Query: 330 LWHCN*RQEGQRVNICITAFVQPTAMVINFCK*SPGDPRSKAQH 199 +W CN RQ+ +R+N C A + P SPG P S + H Sbjct: 342 VWFCNRRQKEKRINPCSAAPMLP----------SPGKPASYSPH 375
>AT1A1_SHEEP (P04074) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1021 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 969 CPGMGVALRMYPLKPTWWFCAFPYSLL 995
>AT1A1_RAT (P06685) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1023 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 971 CPGMGAALRMYPLKPTWWFCAFPYSLL 997
>AT1A1_PIG (P05024) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1021 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 969 CPGMGVALRMYPLKPTWWFCAFPYSLL 995
>AT1A1_MOUSE (Q8VDN2) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1023 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 971 CPGMGAALRMYPLKPTWWFCAFPYSLL 997
>AT1A1_HUMAN (P05023) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1023 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 971 CPGMGVALRMYPLKPTWWFCAFPYSLL 997
>AT1A1_HORSE (P18907) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1021 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 969 CPGMGVALRMYPLKPTWWFCAFPYSLL 995
>AT1A1_CHICK (P09572) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1021 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 969 CPGMDVALRMYPLKPTWWFCAFPYSLL 995
>AT1A1_CANFA (P50997) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1021 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 969 CPGMGVALRMYPLKPTWWFCAFPYSLL 995
>AT1A1_BUFMA (P30714) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1023 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 971 CPGMDVALRMYPLKPTWWFCAFPYSLL 997
>AT1A1_ANGAN (Q92030) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1022 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 970 CPGMDVALRMYPLKPSWWFCAFPYSLL 996
>AT1A2_CHICK (P24797) Sodium/potassium-transporting ATPase alpha-2 chain (EC| 3.6.3.9) (Sodium pump 2) (Na+/K+ ATPase 2) Length = 1017 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 965 CPGMGVALRMYPLKVTWWFCAFPYSLL 991
>GRN_CAVPO (P28797) Granulins precursor (Proepithelin) (PEPI) [Contains:| Acrogranin; Granulin-1; Granulin-2; Granulin-3; Granulin-4; Granulin-5; Granulin-6; Granulin-7] (Fragment) Length = 591 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -1 Query: 464 DDHYSCCPHNYPICNTKQGTCLAAKDSPLSVKAQRRTLAKP 342 +DH CCP + C+T++ TC + L V ++T A+P Sbjct: 315 EDHVHCCPERFR-CHTEKDTC---EQGLLQVPWAQKTPAQP 351
>AT1A2_RAT (P06686) Sodium/potassium-transporting ATPase alpha-2 chain precursor| (EC 3.6.3.9) (Sodium pump 2) (Na+/K+ ATPase 2) (Alpha(+)) Length = 1020 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 968 CPGMGVALRMYPLKVTWWFCAFPYSLL 994
>AT1A2_MOUSE (Q6PIE5) Sodium/potassium-transporting ATPase alpha-2 chain precursor| (EC 3.6.3.9) (Sodium pump 2) (Na+/K+ ATPase 2) (Alpha(+)) Length = 1020 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 968 CPGMGVALRMYPLKVTWWFCAFPYSLL 994
>AT1A2_HUMAN (P50993) Sodium/potassium-transporting ATPase alpha-2 chain precursor| (EC 3.6.3.9) (Sodium pump 2) (Na+/K+ ATPase 2) Length = 1020 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 61 CVGMS*VLHIHMQKQIWWFCKRPNPIL 141 C GM L ++ K WWFC P +L Sbjct: 968 CPGMGVALRMYPLKVTWWFCAFPYSLL 994 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,230,103 Number of Sequences: 219361 Number of extensions: 1397644 Number of successful extensions: 3649 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 3572 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3648 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
