>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
          Length = 198320

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 308   atcactagccagtagccaccagc 330
             |||||||||||||||||||||||
Sbjct: 51486 atcactagccagtagccaccagc 51464

>emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 clone M3E9 (ESSA project)
          Length = 80677

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 308   atcactagccagtagccaccagc 330
             |||||||||||||||||||||||
Sbjct: 54922 atcactagccagtagccaccagc 54944

>emb|AL691470.17| Mouse DNA sequence from clone RP23-160F12 on chromosome 11 Contains the
              3' end of gene FLJ13305, a novel gene, a novel gene
              (1700061J23Rik) and a CpG island, complete sequence
          Length = 195614

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 81     tagtgacaactcaaaggaaatc 102
              ||||||||||||||||||||||
Sbjct: 123552 tagtgacaactcaaaggaaatc 123531

>gb|L29074.1|HUMFMR1S Homo sapiens fragile X mental retardation syndrome protein (FMR1) gene,
             alternative splice products, complete cds; and
             pseudogene, complete sequence
          Length = 185775

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 362   ttccatttgcctcctctttca 382
             |||||||||||||||||||||
Sbjct: 73720 ttccatttgcctcctctttca 73700

>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     aaccaccaagcattgctgct 131
               ||||||||||||||||||||
Sbjct: 3732318 aaccaccaagcattgctgct 3732337

>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     aaccaccaagcattgctgct 131
               ||||||||||||||||||||
Sbjct: 3710251 aaccaccaagcattgctgct 3710270

>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     aaccaccaagcattgctgct 131
               ||||||||||||||||||||
Sbjct: 3710819 aaccaccaagcattgctgct 3710838

>gb|AC099174.7| Rattus norvegicus 4 BAC CH230-98I1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 197530

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   ccttgtatttcctttgaaat 412
             ||||||||||||||||||||
Sbjct: 68586 ccttgtatttcctttgaaat 68605

>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 287     tcctcgcgacgaagcaaaga 306
               ||||||||||||||||||||
Sbjct: 2591555 tcctcgcgacgaagcaaaga 2591536

>gb|AC103355.9| Mus musculus chromosome 14, clone RP24-482C10, complete sequence
          Length = 192348

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 74   gtacagttagtgacaactcaaagg 97
            ||||||| ||||||||||||||||
Sbjct: 9066 gtacagtgagtgacaactcaaagg 9043

>gb|AC129290.4| Mus musculus BAC clone RP24-489L4 from chromosome 6, complete sequence
          Length = 188132

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   ccactgcaccaggtttccat 367
             ||||||||||||||||||||
Sbjct: 23222 ccactgcaccaggtttccat 23241

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     aaccaccaagcattgctgct 131
               ||||||||||||||||||||
Sbjct: 3790560 aaccaccaagcattgctgct 3790579

>emb|AL732604.5| Human DNA sequence from clone RP11-27G9 on chromosome X Contains a SET
              translocation (myeloid leukemia-associated) (SET)
              pseudogene, complete sequence
          Length = 166517

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 397    gtatttcctttgaaatgatc 416
              ||||||||||||||||||||
Sbjct: 146475 gtatttcctttgaaatgatc 146494

>emb|BX088648.9| Mouse DNA sequence from clone RP23-156M16 on chromosome 11, complete
              sequence
          Length = 199838

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 348    ccactgcaccaggtttccat 367
              ||||||||||||||||||||
Sbjct: 139751 ccactgcaccaggtttccat 139770

>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 232     tcatcttgggtaaccaagca 251
               ||||||||||||||||||||
Sbjct: 4598679 tcatcttgggtaaccaagca 4598698

>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete
              sequence
          Length = 108847

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    cctagggaagacaaatgaag 152
              ||||||||||||||||||||
Sbjct: 101402 cctagggaagacaaatgaag 101383

>gb|AC161887.5| Mus musculus 6 BAC RP23-75P5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 227751

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   taacttccttgtatttcctt 406
             ||||||||||||||||||||
Sbjct: 53128 taacttccttgtatttcctt 53147

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    ctgcagccccaaaagaacca 221
              ||||||||||||||||||||
Sbjct: 717677 ctgcagccccaaaagaacca 717658

>gb|AC158685.4| Mus musculus 6 BAC RP23-284D11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 191856

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 387    taacttccttgtatttcctt 406
              ||||||||||||||||||||
Sbjct: 121392 taacttccttgtatttcctt 121411

>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     aaccaccaagcattgctgct 131
               ||||||||||||||||||||
Sbjct: 3710124 aaccaccaagcattgctgct 3710143

>gb|AC166113.3| Mus musculus BAC clone RP23-23E6 from chromosome 14, complete sequence
          Length = 252394

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 74     gtacagttagtgacaactcaaagg 97
              ||||||| ||||||||||||||||
Sbjct: 155929 gtacagtgagtgacaactcaaagg 155906

>emb|AL833798.8| Mouse DNA sequence from clone RP23-130L21 on chromosome 4, complete
             sequence
          Length = 214799

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    aaaggaaatcggatggcaga 112
             ||||||||||||||||||||
Sbjct: 89684 aaaggaaatcggatggcaga 89703


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,355,041
Number of Sequences: 3902068
Number of extensions: 4355041
Number of successful extensions: 71965
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71801
Number of HSP's gapped (non-prelim): 164
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)