ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart33g07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y07959.1|ZMRPP0 Z.mays mRNA for acidic ribosomal protein P0 Length = 1253 Score = 176 bits (89), Expect = 4e-41 Identities = 170/197 (86%) Strand = Plus / Minus Query: 287 gcaaacttgctcgggtccttgaggtactccttgatcttatcagcatggtcatacgagtag 346 ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 968 gcaaacttgcttgggtccttgaggtactccttgatcttgtcagcatgtgggtacgagtag 909 Query: 347 tctgtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatgtgcggtgca 406 |||||||| | ||| || ||||| ||||||||||| |||||| ||||||||| || || Sbjct: 908 tctgtctcgacagcaacagcaagcacattcttgtacccattgatgaacatgtggggcaca 849 Query: 407 gcagccatggtggggtatgagatcgccagggacagggaggcaaccatggaaacaccagaa 466 ||||| | ||| ||||| ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 848 gcagcaagggtcgggtacgagatcgccagtgacagggaggcaaccatggagacaccagtg 789 Query: 467 gcaaacttgtccatcag 483 |||||||| || ||||| Sbjct: 788 gcaaacttctcaatcag 772
>gb|BT016531.1| Zea mays clone Contig364 mRNA sequence Length = 1230 Score = 168 bits (85), Expect = 1e-38 Identities = 169/197 (85%) Strand = Plus / Minus Query: 287 gcaaacttgctcgggtccttgaggtactccttgatcttatcagcatggtcatacgagtag 346 ||||||||||| |||||||||||||||||||||||||| |||||||| || |||||| Sbjct: 949 gcaaacttgcttgggtccttgaggtactccttgatcttgtcagcatgtgggtatgagtag 890 Query: 347 tctgtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatgtgcggtgca 406 |||||||| | ||| || ||||| ||||||||||| |||||| ||||||||| || || Sbjct: 889 tctgtctcgacagcaacagcaagcacattcttgtacccattgatgaacatgtggggcaca 830 Query: 407 gcagccatggtggggtatgagatcgccagggacagggaggcaaccatggaaacaccagaa 466 ||||| | ||| ||||| ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 829 gcagcaagggtcgggtacgagatcgccagtgacagggaggcaaccatggagacaccagtg 770 Query: 467 gcaaacttgtccatcag 483 |||||||| || ||||| Sbjct: 769 gcaaacttctcaatcag 753
>ref|XM_479931.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 163 bits (82), Expect = 7e-37 Identities = 166/194 (85%) Strand = Plus / Minus Query: 290 aacttgctcgggtccttgaggtactccttgatcttatcagcatggtcatacgagtagtct 349 |||||||| ||||| || | ||||||||||||||||||||||| |||||||| || Sbjct: 962 aacttgctggggtctttcaaatactccttgatcttatcagcatgtgggtacgagtattcg 903 Query: 350 gtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatgtgcggtgcagca 409 ||||||| ||| || ||||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 902 gtctccacagcaacagcaagcacattcttgtacccattgaggaacatgtgtggtgcagca 843 Query: 410 gccatggtggggtatgagatcgccagggacagggaggcaaccatggaaacaccagaagca 469 || || || ||||| ||||| |||||||| | ||||||||||| ||||||||||||||| Sbjct: 842 gcaatagttgggtacgagattgccagggagactgaggcaaccatagaaacaccagaagca 783 Query: 470 aacttgtccatcag 483 ||||| |||||||| Sbjct: 782 aacttctccatcag 769 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 191 ccatctgattcctcctcgggttcttccttcttctcctcctccttg 235 ||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct: 1061 ccatcggactcctcctcgggctcttccttcttctcttcctccttg 1017
>dbj|D21130.1|RICYK704 Oryza sativa (japonica cultivar-group) YK704 mRNA for acidic ribosomal protein P0, complete cds Length = 1220 Score = 163 bits (82), Expect = 7e-37 Identities = 166/194 (85%) Strand = Plus / Minus Query: 290 aacttgctcgggtccttgaggtactccttgatcttatcagcatggtcatacgagtagtct 349 |||||||| ||||| || | ||||||||||||||||||||||| |||||||| || Sbjct: 944 aacttgctggggtctttcaaatactccttgatcttatcagcatgtgggtacgagtattcg 885 Query: 350 gtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatgtgcggtgcagca 409 ||||||| ||| || ||||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 884 gtctccacagcaacagcaagcacattcttgtacccattgaggaacatgtgtggtgcagca 825 Query: 410 gccatggtggggtatgagatcgccagggacagggaggcaaccatggaaacaccagaagca 469 || || || ||||| ||||| |||||||| | ||||||||||| ||||||||||||||| Sbjct: 824 gcaatagttgggtacgagattgccagggagactgaggcaaccatagaaacaccagaagca 765 Query: 470 aacttgtccatcag 483 ||||| |||||||| Sbjct: 764 aacttctccatcag 751 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 191 ccatctgattcctcctcgggttcttccttcttctcctcctccttg 235 ||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct: 1043 ccatcggactcctcctcgggctcttccttcttctcttcctccttg 999
>dbj|AK064857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H12, full insert sequence Length = 1236 Score = 163 bits (82), Expect = 7e-37 Identities = 166/194 (85%) Strand = Plus / Minus Query: 290 aacttgctcgggtccttgaggtactccttgatcttatcagcatggtcatacgagtagtct 349 |||||||| ||||| || | ||||||||||||||||||||||| |||||||| || Sbjct: 962 aacttgctggggtctttcaaatactccttgatcttatcagcatgtgggtacgagtattcg 903 Query: 350 gtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatgtgcggtgcagca 409 ||||||| ||| || ||||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 902 gtctccacagcaacagcaagcacattcttgtacccattgaggaacatgtgtggtgcagca 843 Query: 410 gccatggtggggtatgagatcgccagggacagggaggcaaccatggaaacaccagaagca 469 || || || ||||| ||||| |||||||| | ||||||||||| ||||||||||||||| Sbjct: 842 gcaatagttgggtacgagattgccagggagactgaggcaaccatagaaacaccagaagca 783 Query: 470 aacttgtccatcag 483 ||||| |||||||| Sbjct: 782 aacttctccatcag 769 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 191 ccatctgattcctcctcgggttcttccttcttctcctcctccttg 235 ||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct: 1061 ccatcggactcctcctcgggctcttccttcttctcttcctccttg 1017
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 161 bits (81), Expect = 3e-36 Identities = 150/173 (86%) Strand = Plus / Plus Query: 311 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 370 ||||||||||||||||||||||| |||||||| || ||||||| ||| || ||||| Sbjct: 1714802 tactccttgatcttatcagcatgtgggtacgagtattcggtctccacagcaacagcaagc 1714861 Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 430 ||||||||||| |||||||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 1714862 acattcttgtacccattgaggaacatgtgtggtgcagcagcaatagttgggtacgagatt 1714921 Query: 431 gccagggacagggaggcaaccatggaaacaccagaagcaaacttgtccatcag 483 |||||||| | ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1714922 gccagggagactgaggcaaccatagaaacaccagaagcaaacttctccatcag 1714974 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 191 ccatctgattcctcctcgggttcttccttcttctcctcctccttg 235 ||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct: 1714252 ccatcggactcctcctcgggctcttccttcttctcttcctccttg 1714296
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 161 bits (81), Expect = 3e-36 Identities = 150/173 (86%) Strand = Plus / Plus Query: 311 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 370 ||||||||||||||||||||||| |||||||| || ||||||| ||| || ||||| Sbjct: 114302 tactccttgatcttatcagcatgtgggtacgagtattcggtctccacagcaacagcaagc 114361 Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 430 ||||||||||| |||||||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 114362 acattcttgtacccattgaggaacatgtgtggtgcagcagcaatagttgggtacgagatt 114421 Query: 431 gccagggacagggaggcaaccatggaaacaccagaagcaaacttgtccatcag 483 |||||||| | ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 114422 gccagggagactgaggcaaccatagaaacaccagaagcaaacttctccatcag 114474 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 191 ccatctgattcctcctcgggttcttccttcttctcctcctccttg 235 ||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct: 113752 ccatcggactcctcctcgggctcttccttcttctcttcctccttg 113796
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 153 bits (77), Expect = 6e-34 Identities = 149/173 (86%) Strand = Plus / Plus Query: 311 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 370 ||||||||||||||||||||||| || ||||| || ||||||| ||| || ||||| Sbjct: 4180 tactccttgatcttatcagcatgtgggtatgagtattcggtctccacagcaacagcaagc 4239 Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 430 ||||||||||| |||||||||||||||| || |||||||| || || ||||||||||| Sbjct: 4240 acattcttgtacccattgaggaacatgtgtggcgcagcagcaatagttgggtatgagatt 4299 Query: 431 gccagggacagggaggcaaccatggaaacaccagaagcaaacttgtccatcag 483 |||||||||| ||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 4300 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcag 4352 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 200 tcctcctcgggttcttccttcttctcctcctccttg 235 ||||||||||| |||||||||||||| ||||||||| Sbjct: 3673 tcctcctcgggctcttccttcttctcttcctccttg 3708
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 153 bits (77), Expect = 6e-34 Identities = 149/173 (86%) Strand = Plus / Plus Query: 311 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 370 ||||||||||||||||||||||| || ||||| || ||||||| ||| || ||||| Sbjct: 1648466 tactccttgatcttatcagcatgtgggtatgagtattcggtctccacagcaacagcaagc 1648525 Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 430 ||||||||||| |||||||||||||||| || |||||||| || || ||||||||||| Sbjct: 1648526 acattcttgtacccattgaggaacatgtgtggcgcagcagcaatagttgggtatgagatt 1648585 Query: 431 gccagggacagggaggcaaccatggaaacaccagaagcaaacttgtccatcag 483 |||||||||| ||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1648586 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcag 1648638 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 200 tcctcctcgggttcttccttcttctcctcctccttg 235 ||||||||||| |||||||||||||| ||||||||| Sbjct: 1647959 tcctcctcgggctcttccttcttctcttcctccttg 1647994 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gtccttgaggtactccttga 320 |||||||||||||||||||| Sbjct: 26815212 gtccttgaggtactccttga 26815193
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 153 bits (77), Expect = 6e-34 Identities = 149/173 (86%) Strand = Plus / Plus Query: 311 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 370 ||||||||||||||||||||||| || ||||| || ||||||| ||| || ||||| Sbjct: 1646187 tactccttgatcttatcagcatgtgggtatgagtattcggtctccacagcaacagcaagc 1646246 Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 430 ||||||||||| |||||||||||||||| || |||||||| || || ||||||||||| Sbjct: 1646247 acattcttgtacccattgaggaacatgtgtggcgcagcagcaatagttgggtatgagatt 1646306 Query: 431 gccagggacagggaggcaaccatggaaacaccagaagcaaacttgtccatcag 483 |||||||||| ||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1646307 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcag 1646359 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 200 tcctcctcgggttcttccttcttctcctcctccttg 235 ||||||||||| |||||||||||||| ||||||||| Sbjct: 1645680 tcctcctcgggctcttccttcttctcttcctccttg 1645715 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gtccttgaggtactccttga 320 |||||||||||||||||||| Sbjct: 27142444 gtccttgaggtactccttga 27142425
>ref|XM_479932.1| Oryza sativa (japonica cultivar-group), mRNA Length = 451 Score = 133 bits (67), Expect = 6e-28 Identities = 148/175 (84%) Strand = Plus / Minus Query: 290 aacttgctcgggtccttgaggtactccttgatcttatcagcatggtcatacgagtagtct 349 |||||||| ||||| || | ||||||||||||||||||||||| |||||||| || Sbjct: 175 aacttgctggggtctttcaaatactccttgatcttatcagcatgtgggtacgagtattcg 116 Query: 350 gtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatgtgcggtgcagca 409 ||||||| ||| || ||||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 115 gtctccacagcaacagcaagcacattcttgtacccattgaggaacatgtgtggtgcagca 56 Query: 410 gccatggtggggtatgagatcgccagggacagggaggcaaccatggaaacaccag 464 || || || ||||| ||||| |||||||| | ||||||||||| |||||||||| Sbjct: 55 gcaatagttgggtacgagattgccagggagactgaggcaaccatagaaacaccag 1 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 191 ccatctgattcctcctcgggttcttccttcttctcctcctccttg 235 ||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct: 274 ccatcggactcctcctcgggctcttccttcttctcttcctccttg 230
>dbj|AK062008.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-E02, full insert sequence Length = 451 Score = 133 bits (67), Expect = 6e-28 Identities = 148/175 (84%) Strand = Plus / Minus Query: 290 aacttgctcgggtccttgaggtactccttgatcttatcagcatggtcatacgagtagtct 349 |||||||| ||||| || | ||||||||||||||||||||||| |||||||| || Sbjct: 175 aacttgctggggtctttcaaatactccttgatcttatcagcatgtgggtacgagtattcg 116 Query: 350 gtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatgtgcggtgcagca 409 ||||||| ||| || ||||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 115 gtctccacagcaacagcaagcacattcttgtacccattgaggaacatgtgtggtgcagca 56 Query: 410 gccatggtggggtatgagatcgccagggacagggaggcaaccatggaaacaccag 464 || || || ||||| ||||| |||||||| | ||||||||||| |||||||||| Sbjct: 55 gcaatagttgggtacgagattgccagggagactgaggcaaccatagaaacaccag 1 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 191 ccatctgattcctcctcgggttcttccttcttctcctcctccttg 235 ||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct: 274 ccatcggactcctcctcgggctcttccttcttctcttcctccttg 230
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 129 bits (65), Expect = 9e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 311 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 370 |||||||||||||| |||||||| || ||||| || ||||||| ||| || || || Sbjct: 1601677 tactccttgatcttgtcagcatgtgggtatgagtattcggtctccacagcaacagcgagc 1601736 Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 430 ||||||||||| |||||||||||||||| || ||||| || || || ||||||||||| Sbjct: 1601737 acattcttgtacccattgaggaacatgtgtggcgcagctgcgatagttgggtatgagatt 1601796 Query: 431 gccagggacagggaggcaaccatggaaacaccagaagcaaacttgtccatcag 483 |||||||||| ||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1601797 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcag 1601849 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 197 gattcctcctcgggttcttccttcttctcctcctccttg 235 ||||| |||||||| |||||||||||||| ||||||||| Sbjct: 1601163 gattcttcctcgggctcttccttcttctcttcctccttg 1601201 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 27302625 cttccttcttctcctcctcct 27302645 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 24833327 tccttcttctcctcctcctt 24833308
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 129 bits (65), Expect = 9e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 311 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 370 |||||||||||||| |||||||| || ||||| || ||||||| ||| || || || Sbjct: 1601677 tactccttgatcttgtcagcatgtgggtatgagtattcggtctccacagcaacagcgagc 1601736 Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 430 ||||||||||| |||||||||||||||| || ||||| || || || ||||||||||| Sbjct: 1601737 acattcttgtacccattgaggaacatgtgtggcgcagctgcgatagttgggtatgagatt 1601796 Query: 431 gccagggacagggaggcaaccatggaaacaccagaagcaaacttgtccatcag 483 |||||||||| ||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1601797 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcag 1601849 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 197 gattcctcctcgggttcttccttcttctcctcctccttg 235 ||||| |||||||| |||||||||||||| ||||||||| Sbjct: 1601163 gattcttcctcgggctcttccttcttctcttcctccttg 1601201 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 27228225 cttccttcttctcctcctcct 27228245 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 24761533 tccttcttctcctcctcctt 24761514
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 129 bits (65), Expect = 9e-27 Identities = 146/173 (84%) Strand = Plus / Minus Query: 311 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 370 |||||||||||||| |||||||| || ||||| || ||||||| ||| || || || Sbjct: 91245 tactccttgatcttgtcagcatgtgggtatgagtattcggtctccacagcaacagcgagc 91186 Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 430 ||||||||||| |||||||||||||||| || ||||| || || || ||||||||||| Sbjct: 91185 acattcttgtacccattgaggaacatgtgtggcgcagctgcgatagttgggtatgagatt 91126 Query: 431 gccagggacagggaggcaaccatggaaacaccagaagcaaacttgtccatcag 483 |||||||||| ||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 91125 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcag 91073 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 197 gattcctcctcgggttcttccttcttctcctcctccttg 235 ||||| |||||||| |||||||||||||| ||||||||| Sbjct: 91759 gattcttcctcgggctcttccttcttctcttcctccttg 91721
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 129 bits (65), Expect = 9e-27 Identities = 146/173 (84%) Strand = Plus / Minus Query: 311 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 370 |||||||||||||| |||||||| || ||||| || ||||||| ||| || || || Sbjct: 24055 tactccttgatcttgtcagcatgtgggtatgagtattcggtctccacagcaacagcgagc 23996 Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 430 ||||||||||| |||||||||||||||| || ||||| || || || ||||||||||| Sbjct: 23995 acattcttgtacccattgaggaacatgtgtggcgcagctgcgatagttgggtatgagatt 23936 Query: 431 gccagggacagggaggcaaccatggaaacaccagaagcaaacttgtccatcag 483 |||||||||| ||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 23935 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcag 23883 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 197 gattcctcctcgggttcttccttcttctcctcctccttg 235 ||||| |||||||| |||||||||||||| ||||||||| Sbjct: 24569 gattcttcctcgggctcttccttcttctcttcctccttg 24531
>gb|BT018921.1| Zea mays clone Contig30.F mRNA sequence Length = 820 Score = 99.6 bits (50), Expect = 8e-18 Identities = 146/178 (82%) Strand = Plus / Minus Query: 287 gcaaacttgctcgggtccttgaggtactccttgatcttatcagcatggtcatacgagtag 346 |||||||||||||||||||||||||||||||||||||| || || || ||||||||| Sbjct: 469 gcaaacttgctcgggtccttgaggtactccttgatcttgtcggcgtgtgggtacgagtag 410 Query: 347 tctgtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatgtgcggtgca 406 || ||||||| ||| || ||||| || |||||||| |||||| |||||||| || || Sbjct: 409 tccgtctccacagcaacagcaagcacgttcttgtacccattgataaacatgtggggcaca 350 Query: 407 gcagccatggtggggtatgagatcgccagggacagggaggcaaccatggaaacaccag 464 ||||| | ||| ||||| || | |||||||| || || || |||||||| ||||||| Sbjct: 349 gcagcaagggtcgggtacgataatgccagggaaagagaagcgaccatggagacaccag 292
>emb|X15206.1|CRCRE2 C.rubrum mRNA for light-induced 34kD protein Length = 1332 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 159 cttagtcgtcaaacagactgaatcccatctcgccatctgattcctcctcgggttcttcct 218 |||| |||||||| |||||||| || || || |||||||||| ||||| |||||||||| Sbjct: 1206 cttaatcgtcaaagagactgaaaccgatgtcatcatctgattcttcctcaggttcttcct 1147 Query: 219 tcttctcctcc 229 |||| |||||| Sbjct: 1146 tcttttcctcc 1136
>dbj|AB236824.1| Trifolium pratense RNA for putative 60S acidic ribosomal protein P0, complete cds, clone: C2319 Length = 1345 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 367 aagaacattcttgtatgcattgaggaacatgtgcggtgcagc 408 ||||||||||||||| ||||||| ||||||||| |||||||| Sbjct: 912 aagaacattcttgtaggcattgacgaacatgtgaggtgcagc 871
>ref|NM_129559.2| Arabidopsis thaliana structural constituent of ribosome AT2G40010 mRNA, complete cds Length = 1153 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 365 gcaagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtat 424 |||||||| |||||||| ||||||||||||||||| || ||||| || | ||| ||||| Sbjct: 758 gcaagaacgttcttgtaagcattgaggaacatgtgaggcgcagctgctacggttgggtaa 699 Query: 425 gagat 429 ||||| Sbjct: 698 gagat 694
>gb|AY070448.1| Arabidopsis thaliana At2g40010 mRNA sequence Length = 1373 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 365 gcaagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtat 424 |||||||| |||||||| ||||||||||||||||| || ||||| || | ||| ||||| Sbjct: 962 gcaagaacgttcttgtaagcattgaggaacatgtgaggcgcagctgctacggttgggtaa 903 Query: 425 gagat 429 ||||| Sbjct: 902 gagat 898
>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete sequence Length = 108847 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 365 gcaagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtat 424 |||||||| |||||||| ||||||||||||||||| || ||||| || | ||| ||||| Sbjct: 77517 gcaagaacgttcttgtaagcattgaggaacatgtgaggcgcagctgctacggttgggtaa 77576 Query: 425 gagat 429 ||||| Sbjct: 77577 gagat 77581
>emb|BX816288.1|CNS0AE9F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1296 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 365 gcaagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtat 424 |||||||| |||||||| ||||||||||||||||| || ||||| || | ||| ||||| Sbjct: 716 gcaagaacgttcttgtaagcattgaggaacatgtgaggcgcagctgctacggttgggtaa 775 Query: 425 gagat 429 ||||| Sbjct: 776 gagat 780
>gb|BT001919.1| Arabidopsis thaliana clone C105444 putative 60S acidic ribosomal protein P0 (At2g40010) mRNA, complete cds Length = 985 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 365 gcaagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtat 424 |||||||| |||||||| ||||||||||||||||| || ||||| || | ||| ||||| Sbjct: 758 gcaagaacgttcttgtaagcattgaggaacatgtgaggcgcagctgctacggttgggtaa 699 Query: 425 gagat 429 ||||| Sbjct: 698 gagat 694
>ref|NM_111754.2| Arabidopsis thaliana structural constituent of ribosome AT3G09200 mRNA, complete cds Length = 1307 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagcagc 411 |||||||||| ||||||| |||||| |||||||||||||| Sbjct: 818 cattcttgtacgcattgatgaacatatgcggtgcagcagc 779
>gb|AC011436.7|ATAC011436 Arabidopsis thaliana chromosome III BAC F3L24 genomic sequence, complete sequence Length = 106688 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagcagc 411 |||||||||| ||||||| |||||| |||||||||||||| Sbjct: 20252 cattcttgtacgcattgatgaacatatgcggtgcagcagc 20291
>gb|AC009326.8|ATAC009326 Arabidopsis thaliana chromosome III P1 MZB10 genomic sequence, complete sequence Length = 85561 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagcagc 411 |||||||||| ||||||| |||||| |||||||||||||| Sbjct: 84575 cattcttgtacgcattgatgaacatatgcggtgcagcagc 84614
>gb|AY059117.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P0 (At3g09200) mRNA, complete cds Length = 994 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagcagc 411 |||||||||| ||||||| |||||| |||||||||||||| Sbjct: 748 cattcttgtacgcattgatgaacatatgcggtgcagcagc 709
>gb|AF370225.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P0 (At3g09200) mRNA, complete cds Length = 1160 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagcagc 411 |||||||||| ||||||| |||||| |||||||||||||| Sbjct: 818 cattcttgtacgcattgatgaacatatgcggtgcagcagc 779
>emb|BX824039.1|CNS0A6RI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH17ZF06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1185 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagcagc 411 |||||||||| ||||||| |||||| |||||||||||||| Sbjct: 802 cattcttgtacgcattgatgaacatatgcggtgcagcagc 763
>emb|BX823923.1|CNS0A6KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1136 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagcagc 411 |||||||||| ||||||| |||||| |||||||||||||| Sbjct: 785 cattcttgtacgcattgatgaacatatgcggtgcagcagc 746
>gb|AY086582.1| Arabidopsis thaliana clone 2595 mRNA, complete sequence Length = 1199 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagcagc 411 |||||||||| ||||||| |||||| |||||||||||||| Sbjct: 816 cattcttgtacgcattgatgaacatatgcggtgcagcagc 777
>gb|BT016538.1| Zea mays clone Contig371 mRNA sequence Length = 707 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 170 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctc 228 ||||| ||||| ||||| ||| |||| || ||||||| ||| ||||||||||||||||| Sbjct: 414 aacaggctgaagcccatgtcgtcatcagactcctccttgggctcttccttcttctcctc 356
>gb|L46848.1|SOYARPP Glycine max acidic ribosomal protein P0 mRNA, complete cds Length = 1247 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 365 gcaagaacattcttgtatgcattgaggaacatgtgcggtgcagcagc 411 ||||||||||||||||| ||||||| |||||||| ||||| ||||| Sbjct: 885 gcaagaacattcttgtaggcattgacaaacatgtgtggtgctgcagc 839 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 209 ggttcttccttcttctcctcctccttg 235 |||||||||||||| |||||||||||| Sbjct: 1044 ggttcttccttcttttcctcctccttg 1018
>gb|DQ235177.1| Solanum tuberosum clone 157H11 acidic ribosomal protein P1a-like mRNA, complete cds Length = 567 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 167 tcaaacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcc 226 |||||||||||||||||||| ||| |||| ||| |||| ||| ||||||||||| ||| Sbjct: 393 tcaaacagactgaatcccatatcgtcatcactttcttccttgggctcttccttcttttcc 334 Query: 227 tc 228 || Sbjct: 333 tc 332
>dbj|AB236811.1| Trifolium pratense RNA for putative 60S acidic ribosomal protein P0, complete cds, clone: C212 Length = 1326 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 367 aagaacattcttgtatgcattgaggaacatgtgcggtgcagc 408 ||||||||||||||| ||||| | ||||||||| |||||||| Sbjct: 919 aagaacattcttgtaggcattcacgaacatgtgaggtgcagc 878
>emb|BX819391.1|CNS0A9W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 961 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 365 gcaagaacattcttgtatgcattgaggaacatgt 398 |||||||| |||||||| |||||||||||||||| Sbjct: 614 gcaagaacgttcttgtaagcattgaggaacatgt 581
>ref|NM_111960.2| Arabidopsis thaliana structural constituent of ribosome AT3G11250 mRNA, complete cds Length = 1239 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagc 408 |||||||||| ||||||| |||||| ||||||||||| Sbjct: 841 cattcttgtaggcattgatgaacatatgcggtgcagc 805
>gb|AY091201.1| Arabidopsis thaliana putative 60S acidic ribosomal protein (At3g11250) mRNA, complete cds Length = 1003 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagc 408 |||||||||| ||||||| |||||| ||||||||||| Sbjct: 748 cattcttgtaggcattgatgaacatatgcggtgcagc 712
>gb|AY056150.1| Arabidopsis thaliana putative 60S acidic ribosomal protein (At3g11250) mRNA, complete cds Length = 1174 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagc 408 |||||||||| ||||||| |||||| ||||||||||| Sbjct: 811 cattcttgtaggcattgatgaacatatgcggtgcagc 775
>gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195757 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 285 cggcaaacttgctcgggtccttgaggtactccttgat 321 |||| |||||||| |||||||||| |||||||||||| Sbjct: 186062 cggcgaacttgctggggtccttgatgtactccttgat 186098
>gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167026 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 285 cggcaaacttgctcgggtccttgaggtactccttgat 321 |||| |||||||| |||||||||| |||||||||||| Sbjct: 140120 cggcgaacttgctggggtccttgatgtactccttgat 140084
>ref|NM_079487.2| Drosophila melanogaster Ribosomal protein LP0 CG7490-RA (RpLP0), mRNA Length = 1262 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 285 cggcaaacttgctcgggtccttgaggtactccttgat 321 |||| |||||||| |||||||||| |||||||||||| Sbjct: 964 cggcgaacttgctggggtccttgatgtactccttgat 928
>gb|AY075528.1| Drosophila melanogaster RE74511 full length cDNA Length = 1277 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 285 cggcaaacttgctcgggtccttgaggtactccttgat 321 |||| |||||||| |||||||||| |||||||||||| Sbjct: 964 cggcgaacttgctggggtccttgatgtactccttgat 928
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagc 408 |||||||||| ||||||| |||||| ||||||||||| Sbjct: 59669 cattcttgtaggcattgatgaacatatgcggtgcagc 59633
>gb|AY087728.1| Arabidopsis thaliana clone 38036 mRNA, complete sequence Length = 1185 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 372 cattcttgtatgcattgaggaacatgtgcggtgcagc 408 |||||||||| ||||||| |||||| ||||||||||| Sbjct: 788 cattcttgtaggcattgatgaacatatgcggtgcagc 752
>gb|BT021447.1| Drosophila melanogaster GH01513 full insert cDNA Length = 1674 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 285 cggcaaacttgctcgggtccttgaggtactccttgat 321 |||| |||||||| |||||||||| |||||||||||| Sbjct: 1350 cggcgaacttgctggggtccttgatgtactccttgat 1314
>gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77 of 83 of the complete sequence Length = 249021 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 285 cggcaaacttgctcgggtccttgaggtactccttgat 321 |||| |||||||| |||||||||| |||||||||||| Sbjct: 202487 cggcgaacttgctggggtccttgatgtactccttgat 202451
>gb|M25772.1|DROAP3A Drosophila melanogaster DNA repair protein (AP3) mRNA, complete cds Length = 1193 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 285 cggcaaacttgctcgggtccttgaggtactccttgat 321 |||| |||||||| |||||||||| |||||||||||| Sbjct: 896 cggcgaacttgctggggtccttgatgtactccttgat 860
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcctt 234 |||||||||||||||||||||||| Sbjct: 82831 ttcttccttcttctcctcctcctt 82808
>gb|DQ235176.1| Solanum tuberosum clone 156H10 P0 ribosomal protein-like mRNA, complete cds Length = 1254 Score = 48.1 bits (24), Expect = 0.027 Identities = 57/68 (83%) Strand = Plus / Minus Query: 167 tcaaacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcc 226 ||||||| |||||| ||||| || ||||||| |||| | || ||||||||||||||| Sbjct: 1122 tcaaacaaactgaaacccatgtcatcatctgagacctcagcaggctcttccttcttctcc 1063 Query: 227 tcctcctt 234 |||||||| Sbjct: 1062 tcctcctt 1055 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagc 411 ||||||||||| || ||| ||||||||| ||||||||||| Sbjct: 915 acattcttgtaggcgttggtgaacatgtgtggtgcagcagc 875
>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence Length = 207024 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcctt 234 |||||||||||||||||||||||| Sbjct: 120186 ttcttccttcttctcctcctcctt 120163 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 119856 tccttcttctcctcctcctt 119837
>gb|AC164402.3| Mus musculus chromosome 15, clone RP23-463G20, complete sequence Length = 196916 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 453 tggaaacaccagaagcaaacttgtccat 480 |||||||||||||||||| ||||||||| Sbjct: 95996 tggaaacaccagaagcaagcttgtccat 96023
>gb|BC042186.1| Homo sapiens cDNA clone IMAGE:5393404, partial cds Length = 814 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcctt 234 |||||||||||||||||||||||| Sbjct: 693 ttcttccttcttctcctcctcctt 670 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcctt 234 |||||||||||||||||||||||| Sbjct: 525 ttcttccttcttctcctcctcctt 502
>emb|Z84486.1|HS528L19 Human DNA sequence from clone RP3-528L19 on chromosome 6q23 Contains part of the SGK gene for serum/glucocorticoid regulated kinase, complete sequence Length = 87013 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcctt 234 |||||||||||||||||||||||| Sbjct: 10013 ttcttccttcttctcctcctcctt 9990
>ref|XM_795562.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC591398 (LOC591398), mRNA Length = 2148 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcctt 234 |||||||||||||||||||||||| Sbjct: 753 ttcttccttcttctcctcctcctt 730
>emb|BX071599.1|CNS09RER Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC9AG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 322 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Plus Query: 285 cggcaaacttgctcgggtccttgaggtactccttga 320 |||| ||||||||||||||||||| | ||||||||| Sbjct: 96 cggcgaacttgctcgggtccttgatgaactccttga 131
>emb|BX052086.1|CNS09CCQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3AB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 956 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Plus Query: 285 cggcaaacttgctcgggtccttgaggtactccttga 320 |||| ||||||||||||||||||| | ||||||||| Sbjct: 398 cggcgaacttgctcgggtccttgatgaactccttga 433
>emb|BX052085.1|CNS09CCP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3AB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1013 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 285 cggcaaacttgctcgggtccttgaggtactccttga 320 |||| ||||||||||||||||||| | ||||||||| Sbjct: 906 cggcgaacttgctcgggtccttgatgaactccttga 871
>dbj|AK021773.1| Homo sapiens cDNA FLJ11711 fis, clone HEMBA1005152 Length = 1839 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcctt 234 |||||||||||||||||||||||| Sbjct: 1292 ttcttccttcttctcctcctcctt 1269
>gb|AC069368.14| Homo sapiens chromosome 15, clone CTD-2017F17, complete sequence Length = 132080 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcctt 234 |||||||||||||||||||||||| Sbjct: 15516 ttcttccttcttctcctcctcctt 15493
>gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complete sequence Length = 201215 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcctt 234 |||||||||||||||||||||||| Sbjct: 84922 ttcttccttcttctcctcctcctt 84945 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 85172 ttcttccttcttctcctcctcct 85194 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 84770 ttcttccttcttctcctcctcct 84792 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctc 231 ||||||||||||||||||||| Sbjct: 85098 ttcttccttcttctcctcctc 85118 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctc 231 ||||||||||||||||||||| Sbjct: 85061 ttcttccttcttctcctcctc 85081 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctc 231 ||||||||||||||||||||| Sbjct: 84637 ttcttccttcttctcctcctc 84657 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcctt 234 ||||||||||| |||||||||||| Sbjct: 85150 ttcttccttctcctcctcctcctt 85173 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcctt 234 ||||||||||| |||||||||||| Sbjct: 84689 ttcttccttctcctcctcctcctt 84712 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ttccttcttctcctcctcct 233 |||||||||||||||||||| Sbjct: 84609 ttccttcttctcctcctcct 84628
>gb|AC153881.4| Mus musculus 10 BAC RP23-257B9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208992 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcctt 234 |||||||||||||||||||||||| Sbjct: 90371 ttcttccttcttctcctcctcctt 90348 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 91168 tcttccttcttctcctcctcctt 91146 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 91119 tcttccttcttctcctcctcctt 91097
>dbj|AB178287.1| Neospora caninum NcRP1 mRNA for ribosomal protein P1, complete cds Length = 555 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 199 ttcctcctcgggttcttccttcttctcctcct 230 ||||||||| || ||||||||||||||||||| Sbjct: 344 ttcctcctcaggctcttccttcttctcctcct 313
>gb|DQ306774.1| Hevea brasiliensis isolate SSH45 mRNA sequence Length = 308 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Minus Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatga 426 ||||||||||| ||||| | ||||||||| |||||||| |||| || |||||||| Sbjct: 249 acattcttgtaggcattaacgaacatgtgtggtgcagctgccagagttgggtatga 194
>gb|DQ306752.1| Hevea brasiliensis isolate SSH23 mRNA sequence Length = 308 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Minus Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatga 426 ||||||||||| ||||| | ||||||||| |||||||| |||| || |||||||| Sbjct: 249 acattcttgtaggcattaacgaacatgtgtggtgcagctgccagagttgggtatga 194
>emb|AL928893.10| Mouse DNA sequence from clone RP23-55I14 on chromosome 2, complete sequence Length = 235241 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcctt 234 |||||||||||||||||||||||| Sbjct: 181544 ttcttccttcttctcctcctcctt 181521
>gb|DQ241840.1| Solanum tuberosum clone 181G12 P0 ribosomal protein-like mRNA, complete cds Length = 1253 Score = 48.1 bits (24), Expect = 0.027 Identities = 57/68 (83%) Strand = Plus / Minus Query: 167 tcaaacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcc 226 ||||||| |||||| ||||| || ||||||| |||| | || ||||||||||||||| Sbjct: 1100 tcaaacaaactgaaacccatgtcatcatctgagacctcagcaggctcttccttcttctcc 1041 Query: 227 tcctcctt 234 |||||||| Sbjct: 1040 tcctcctt 1033 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagc 411 ||||||||||| || ||| ||||||||| ||||||||||| Sbjct: 893 acattcttgtaggcgttggtgaacatgtgtggtgcagcagc 853
>gb|AC106843.11| Mus musculus chromosome 15, clone RP24-151M4, complete sequence Length = 179117 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 453 tggaaacaccagaagcaaacttgtccat 480 |||||||||||||||||| ||||||||| Sbjct: 142546 tggaaacaccagaagcaagcttgtccat 142519
>gb|AC114644.10| Mus musculus chromosome 1, clone RP24-128L10, complete sequence Length = 137391 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 11064 tcttccttcttctcctcctcctt 11086
>gb|AC132899.11| Mus musculus chromosome 15, clone RP24-367P22, complete sequence Length = 152183 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 57446 ttcttccttcttctcctcctcct 57424
>gb|AC118688.10| Mus musculus chromosome 5, clone RP23-302F24, complete sequence Length = 176001 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 172961 ttcttccttcttctcctcctcct 172939
>ref|XM_467718.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1727 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 297 tcgggtccttgaggtactccttg 319 ||||||||||||||||||||||| Sbjct: 1150 tcgggtccttgaggtactccttg 1128
>ref|XM_464973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 202 ctcctcgggttcttccttcttctcctc 228 |||||||| |||||||||||||||||| Sbjct: 643 ctcctcggcttcttccttcttctcctc 617
>gb|AC115846.7| Mus musculus chromosome 1, clone RP24-245O4, complete sequence Length = 170731 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 142719 tcttccttcttctcctcctcctt 142741
>gb|BT018010.1| Zea mays clone EL01N0528A08.c mRNA sequence Length = 654 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 170 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctc 228 ||||| ||||| ||||| ||| |||| || ||||||| || ||||||||||||||||| Sbjct: 383 aacaggctgaagcccatgtcgtcatcagactcctccttggcctcttccttcttctcctc 325
>gb|AC106169.5| Rattus norvegicus x BAC CH230-105D14 (Children's Hospital Oakland Research Institute) complete sequence Length = 227592 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 169350 ttcttccttcttctcctcctcct 169328
>gb|DQ440047.1| Aedes aegypti clone AE-294 60S acidic ribosomal protein P1 mRNA, complete cds Length = 339 Score = 46.1 bits (23), Expect = 0.11 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 170 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctcc 229 ||||||| ||||||||| ||| |||| || ||||||||||||||||| ||||| ||| Sbjct: 332 aacagaccgaatcccatatcgtcatcgga---ctcctcgggttcttcctccttcttctct 276 Query: 230 tcctt 234 ||||| Sbjct: 275 tcctt 271
>ref|XM_656186.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3674.2), mRNA Length = 1671 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 1067 tcttccttcttctcctcctcctt 1045
>gb|AF039040.1| Caenorhabditis elegans cosmid T22B11, complete sequence Length = 35564 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 10364 ttcttccttcttctcctcctcct 10342
>gb|AC157650.2| Mus musculus BAC clone RP24-573N21 from chromosome 14, complete sequence Length = 186859 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 28541 tcttccttcttctcctcctcctt 28563 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 28433 tcttccttcttctcctcctcctt 28455 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 28013 tcttccttcttctcctcctcctt 28035 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 27911 tcttccttcttctcctcctcctt 27933
>gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome 8, complete sequence Length = 209383 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 25238 ttcttccttcttctcctcctcct 25260
>gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosome 17, complete sequence Length = 147557 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 86312 ttcttccttcttctcctcctcct 86334
>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete sequence Length = 200595 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 150252 ttcttccttcttctcctcctcct 150230
>gb|AC127374.4| Mus musculus BAC clone RP23-46G11 from chromosome 8, complete sequence Length = 180143 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 138076 tcttccttcttctcctcctcctt 138054
>gb|AC123558.5| Mus musculus BAC clone RP23-336N16 from chromosome 5, complete sequence Length = 211763 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 167146 ttcttccttcttctcctcctcct 167168
>gb|AC121862.3| Mus musculus BAC clone RP24-110E10 from chromosome 14, complete sequence Length = 178501 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 16331 tcttccttcttctcctcctcctt 16309 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 16229 tcttccttcttctcctcctcctt 16207 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 16106 tcttccttcttctcctcctcctt 16084 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 15686 tcttccttcttctcctcctcctt 15664 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 15578 tcttccttcttctcctcctcctt 15556
>gb|AC122246.5| Mus musculus BAC clone RP23-152K13 from 1, complete sequence Length = 203739 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 16622 ttcttccttcttctcctcctcct 16600
>gb|AC125344.2| Mus musculus BAC clone RP24-332H21 from 12, complete sequence Length = 179908 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 166658 ttcttccttcttctcctcctcct 166636
>emb|CR637846.2|CNS0ER4S Tetraodon nigroviridis full-length cDNA Length = 516 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 428 tcttccttcttctcctcctcctt 406
>emb|AL596188.6| Human DNA sequence from clone CTA-31J9 on chromosome 6 Contains the 5' part of a novel gene, a novel gene and a CpG island, complete sequence Length = 69676 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 16837 tcttccttcttctcctcctcctt 16815
>emb|AL157388.12| Human DNA sequence from clone RP11-215A21 on chromosome 10 Contains the 5' end of a novel gene (MGC33215), a ribosomal protein L17 (rpL23) (RPL17) pseudogene and three CpG islands, complete sequence Length = 183382 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 173628 ttcttccttcttctcctcctcct 173606
>gb|AY239227.1| Eimeria maxima TFP250 mRNA, complete cds Length = 7990 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 7067 ttcttccttcttctcctcctcct 7045
>emb|CR938347.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAA2YC06AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 631 Score = 46.1 bits (23), Expect = 0.11 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 170 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctcc 229 ||||||| ||||||||| ||| |||| || ||||||||||||||||| ||||| ||| Sbjct: 425 aacagaccgaatcccatatcgtcatcgga---ctcctcgggttcttcctccttcttctct 369 Query: 230 tcctt 234 ||||| Sbjct: 368 tcctt 364
>emb|CR937313.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB2YG10AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 583 Score = 46.1 bits (23), Expect = 0.11 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 170 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctcc 229 ||||||| ||||||||| ||| |||| || ||||||||||||||||| ||||| ||| Sbjct: 424 aacagaccgaatcccatatcgtcatcgga---ctcctcgggttcttcctccttcttctct 368 Query: 230 tcctt 234 ||||| Sbjct: 367 tcctt 363
>emb|CR937312.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAB2YG10BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 566 Score = 46.1 bits (23), Expect = 0.11 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Plus Query: 170 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctcc 229 ||||||| ||||||||| ||| |||| || ||||||||||||||||| ||||| ||| Sbjct: 142 aacagaccgaatcccatatcgtcatcgga---ctcctcgggttcttcctccttcttctct 198 Query: 230 tcctt 234 ||||| Sbjct: 199 tcctt 203
>gb|AC163649.3| Mus musculus BAC clone RP24-372B10 from chromosome 3, complete sequence Length = 154740 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 50581 ttcttccttcttctcctcctcct 50603
>gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosome 12, complete sequence Length = 196540 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 146087 ttcttccttcttctcctcctcct 146109
>ref|NM_001028223.2| Caenorhabditis elegans T22B11.4b (T22B11.4) mRNA, complete cds Length = 1935 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 1057 ttcttccttcttctcctcctcct 1035
>ref|NM_001028222.2| Caenorhabditis elegans T22B11.4a (T22B11.4) mRNA, complete cds Length = 1958 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 1057 ttcttccttcttctcctcctcct 1035
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 297 tcgggtccttgaggtactccttg 319 ||||||||||||||||||||||| Sbjct: 31019551 tcgggtccttgaggtactccttg 31019529 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 202 ctcctcgggttcttccttcttctcctc 228 |||||||| |||||||||||||||||| Sbjct: 10714608 ctcctcggcttcttccttcttctcctc 10714634 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 4617572 cttccttcttctcctcctcct 4617592 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctccttg 235 ||||||||||||||||||| |||| Sbjct: 22578567 tcttccttcttctcctccttcttg 22578590
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 297 tcgggtccttgaggtactccttg 319 ||||||||||||||||||||||| Sbjct: 74507 tcgggtccttgaggtactccttg 74485
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 297 tcgggtccttgaggtactccttg 319 ||||||||||||||||||||||| Sbjct: 8775 tcgggtccttgaggtactccttg 8753
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0018M09 Length = 157377 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 202 ctcctcgggttcttccttcttctcctc 228 |||||||| |||||||||||||||||| Sbjct: 132298 ctcctcggcttcttccttcttctcctc 132324
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 202 ctcctcgggttcttccttcttctcctc 228 |||||||| |||||||||||||||||| Sbjct: 54089 ctcctcggcttcttccttcttctcctc 54115
>dbj|AK071385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092C13, full insert sequence Length = 1726 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 297 tcgggtccttgaggtactccttg 319 ||||||||||||||||||||||| Sbjct: 1149 tcgggtccttgaggtactccttg 1127
>dbj|AK058613.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A12, full insert sequence Length = 1080 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 202 ctcctcgggttcttccttcttctcctc 228 |||||||| |||||||||||||||||| Sbjct: 643 ctcctcggcttcttccttcttctcctc 617
>tpe|BN000560.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx31 gene for class III peroxidase 31 precursor, exon 1 Length = 1353 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 297 tcgggtccttgaggtactccttg 319 ||||||||||||||||||||||| Sbjct: 1072 tcgggtccttgaggtactccttg 1050
>gb|AC117614.12| Mus musculus chromosome 5, clone RP23-110C17, complete sequence Length = 222809 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 125950 ttcttccttcttctcctcctcct 125928
>gb|AC140416.2| Mus musculus BAC clone RP24-347A16 from 6, complete sequence Length = 188390 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 152914 ttcttccttcttctcctcctcct 152892
>gb|AC122486.4| Mus musculus BAC clone RP24-380B9 from 12, complete sequence Length = 128253 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 537 ttcttccttcttctcctcctcct 515
>gb|AC124344.6| Mus musculus BAC clone RP24-448A7 from 3, complete sequence Length = 219818 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 160984 ttcttccttcttctcctcctcct 161006
>gb|AC132407.3| Mus musculus BAC clone RP23-343G12 from 8, complete sequence Length = 205357 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcctt 234 ||||||||||||||||||||||| Sbjct: 186871 tcttccttcttctcctcctcctt 186893
>gb|U62752.1|ZMU62752 Zea mays acidic ribosomal protein P1a (rpp1a) mRNA, complete cds Length = 573 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 170 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctc 228 ||||| ||||| ||||| ||| |||| || ||||||| || ||||||||||||||||| Sbjct: 354 aacaggctgaagcccatgtcgtcatcagactcctccttggcctcttccttcttctcctc 296
>gb|U40147.1|ZMU40147 Zea mays ribosomal protein L12 mRNA, complete cds Length = 530 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 170 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctc 228 ||||| ||||| ||||| ||| |||| || ||||||| || ||||||||||||||||| Sbjct: 389 aacaggctgaagcccatgtcgtcatcagactcctccttggcctcttccttcttctcctc 331
>gb|DQ270163.1| Cricetulus barabensis clone L5 microsatellite sequence Length = 748 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 307 ttcttccttcttctcctcctcct 329
>emb|AL596331.15| Mouse DNA sequence from clone RP23-81G14 on chromosome 11, complete sequence Length = 228391 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 180930 ttcttccttcttctcctcctcct 180908
>emb|AL627236.11| Mouse DNA sequence from clone RP23-384G12 on chromosome 4, complete sequence Length = 201752 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctcct 233 ||||||||||||||||||||||| Sbjct: 84235 ttcttccttcttctcctcctcct 84257
>gb|L24094.1|GORADPRB Gorilla gorilla ADP-ribosyltransferase (NAD+) pseudogene, repeat region Length = 5787 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 409 agccatggtggggtatgagatcg 431 ||||||||||||||||||||||| Sbjct: 3337 agccatggtggggtatgagatcg 3359
>gb|AC114554.8| Mus musculus chromosome 5, clone RP23-414E14, complete sequence Length = 204467 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 125143 tcttccttcttctcctcctcct 125122
>gb|DQ213908.1| Taeniopygia guttata clone 0061P0002B01 mRNA sequence Length = 752 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 521 tcttccttcttctcctcctcct 500
>gb|AC128859.4| Rattus norvegicus 10 BAC CH230-436I22 (Children's Hospital Oakland Research Institute) complete sequence Length = 156078 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcctt 234 |||||||||||||||||||||| Sbjct: 100686 cttccttcttctcctcctcctt 100707 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 99418 tccttcttctcctcctccttg 99438 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 101950 tccttcttctcctcctcctt 101969 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 101935 tccttcttctcctcctcctt 101954 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 101543 tccttcttctcctcctcctt 101562
>gb|AY674236.1| Ixodes pacificus clone IP_7_60_92_569_CLU ribosomal protein, large P2 mRNA, complete cds Length = 345 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 202 ctcctcgggttcttccttcttctcctcctccttg 235 |||||||| ||||||||||||||||||| |||| Sbjct: 309 ctcctcggactcttccttcttctcctccttcttg 276
>gb|AC124614.11| Mus musculus chromosome 10, clone RP24-417L12, complete sequence Length = 173306 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 94724 tcttccttcttctcctcctcct 94703
>gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, complete sequence Length = 203120 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 62058 tcttccttcttctcctcctcct 62037
>gb|AC140426.3| Mus musculus BAC clone RP24-98A17 from chromosome 14, complete sequence Length = 189282 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 149776 tcttccttcttctcctcctcct 149797
>gb|AY391258.1| Oxyrrhis marina heat shock protein 90 gene, partial cds Length = 1713 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 632 tcttccttcttctcctcctcct 611
>gb|AC133514.4| Mus musculus BAC clone RP23-212F6 from chromosome 5, complete sequence Length = 208083 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 378 tgtatgcattgaggaacatgtg 399 |||||||||||||||||||||| Sbjct: 71896 tgtatgcattgaggaacatgtg 71917
>gb|AC125057.5| Mus musculus BAC clone RP23-399K1 from chromosome 12, complete sequence Length = 182276 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 92099 tcttccttcttctcctcctcct 92078
>gb|AC125128.3| Mus musculus BAC clone RP24-289N17 from chromosome 14, complete sequence Length = 180645 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 27107 tcttccttcttctcctcctcct 27128
>emb|Z70280.1|HSV210E9 Human DNA sequence from clone GHc-210E9 on chromosome X Contains the 5' end of the DRP2 gene for dystrophin related protein 2, a pseudogene similar to part of tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein and a CpG island, complete sequence Length = 37194 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 3091 tcttccttcttctcctcctcct 3112
>emb|BX649553.6| Human DNA sequence from clone RP4-674K6 on chromosome X, complete sequence Length = 86882 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 54250 tcttccttcttctcctcctcct 54271
>emb|AL160162.11| Human DNA sequence from clone RP1-200K18 on chromosome 6 Contains a novel gene, complete sequence Length = 82329 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcctt 234 |||||||||||||||||||||| Sbjct: 43601 cttccttcttctcctcctcctt 43622
>emb|AL138809.18| Human DNA sequence from clone RP5-981M18 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 94710 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcc 232 |||||||||||||||||||||| Sbjct: 63360 ttcttccttcttctcctcctcc 63339
>emb|BX070622.1|CNS09QNM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC7DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 966 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Minus Query: 285 cggcaaacttgctcgggtccttgaggtactccttgatc 322 |||| ||||||||||| ||||||| | ||||||||||| Sbjct: 900 cggcgaacttgctcggatccttgatgaactccttgatc 863
>emb|BX010374.1|CNS08G62 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA16CG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 816 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 285 cggcaaacttgctcgggtccttgaggtactccttgatc 322 |||| ||||||||||| ||||||| | ||||||||||| Sbjct: 392 cggcgaacttgctcggatccttgatgaactccttgatc 429
>emb|AL662806.20| Mouse DNA sequence from clone RP23-273O7 on chromosome 11 Contains the 5' end of the Cyfip2 gene for cytoplasmic FMR1 interacting protein 2, the Itk gene for IL2-inducible T-cell kinase, two novel genes and a CpG island, complete sequence Length = 161754 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 17792 tcttccttcttctcctcctcct 17771
>gb|AC164578.5| Mus musculus BAC RP23-15E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225564 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 110782 tcttccttcttctcctcctcct 110761
>emb|AL645971.12| Mouse DNA sequence from clone RP23-378J19 on chromosome 11 Vontains the 5' end of the gene for novel protein similar to human RAP1 GTPase activating protein 1 RAP1GA1,,a novel gene and three CpG islands, complete sequence Length = 102898 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 72328 tcttccttcttctcctcctcct 72307
>emb|AL928566.4| Mouse DNA sequence from clone RP23-311A20 on chromosome 4 Contains a CCHC domain containing zinc finger 9 (Zcchc9) pseudogene, complete sequence Length = 160214 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcctt 234 |||||||||||||||||||||| Sbjct: 100140 cttccttcttctcctcctcctt 100161
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 397 gtgcggtgcagcagccatggtg 418 |||||||||||||||||||||| Sbjct: 4483112 gtgcggtgcagcagccatggtg 4483133
>gb|AC127520.5| Homo sapiens chromosome 15, clone RP11-825M14, complete sequence Length = 155382 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 144306 tcttccttcttctcctcctcct 144285
>gb|AC150899.3| Mus musculus BAC clone RP23-179F8 from chromosome 10, complete sequence Length = 202346 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 708 tcttccttcttctcctcctcct 687
>gb|AC009063.8| Homo sapiens chromosome 16 clone RP11-298D21, complete sequence Length = 194237 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 92799 tcttccttcttctcctcctcct 92820
>gb|DQ066213.1| Ixodes scapularis isolate ISUFL22 60S acidic ribosomal protein P0 mRNA, complete cds Length = 960 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 cgggtccttgaggtactccttg 319 |||||||||||||||||||||| Sbjct: 816 cgggtccttgaggtactccttg 795 Score = 40.1 bits (20), Expect = 6.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 199 ttcctcctcgggttcttccttcttctcctcctcctt 234 ||||||||||| |||||| ||||| |||||||||| Sbjct: 927 ttcctcctcggattcttctttcttagcctcctcctt 892
>gb|DQ066207.1| Ixodes scapularis isolate ISUFL46 ribosomal protein LP2 mRNA, complete cds Length = 345 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 202 ctcctcgggttcttccttcttctcctcctccttg 235 |||||||| |||||| ||||||||||||| |||| Sbjct: 309 ctcctcggattcttctttcttctcctccttcttg 276
>gb|AC158658.4| Mus musculus 6 BAC RP23-400L4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197909 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 55670 tcttccttcttctcctcctcct 55691
>gb|AC012320.6|AC012320 Homo sapiens chromosome 16 clone RP11-280N16, complete sequence Length = 189840 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 32958 tcttccttcttctcctcctcct 32979
>gb|AC097586.3| Sus scrofa clone RP44-394E19, complete sequence Length = 174554 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 128990 tcttccttcttctcctcctcct 128969
>gb|AC068831.17| Homo sapiens chromosome 15, clone RP11-2O19, complete sequence Length = 136975 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 136889 tcttccttcttctcctcctcct 136910
>gb|AF227622.1|AF227622 Euphorbia esula 60S acidic ribosomal protein PO mRNA, partial cds Length = 1127 Score = 44.1 bits (22), Expect = 0.42 Identities = 49/58 (84%) Strand = Plus / Minus Query: 371 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgaga 428 ||||||||||| ||||| | ||||||||| || |||||||| | || |||||||||| Sbjct: 743 acattcttgtaggcattaatgaacatgtggggggcagcagctagagttgggtatgaga 686
>emb|AJ322895.1|HSA322895 Homo sapiens genomic sequence surrounding NotI site, clone NR1-OC4R Length = 843 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 213 cttccttcttctcctcctcctt 234 |||||||||||||||||||||| Sbjct: 573 cttccttcttctcctcctcctt 552
>dbj|AP000722.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-675M1, complete sequence Length = 177882 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcc 232 |||||||||||||||||||||| Sbjct: 14264 ttcttccttcttctcctcctcc 14243
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 397 gtgcggtgcagcagccatggtg 418 |||||||||||||||||||||| Sbjct: 4485675 gtgcggtgcagcagccatggtg 4485696
>dbj|AP003124.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-447G14, complete sequence Length = 177483 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcc 232 |||||||||||||||||||||| Sbjct: 105144 ttcttccttcttctcctcctcc 105123
>dbj|AP002469.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-266E8, complete sequence Length = 158977 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcctt 234 |||||||||||||||||||||| Sbjct: 110140 cttccttcttctcctcctcctt 110161
>dbj|AP002762.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-811I7, complete sequence Length = 189993 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcctt 234 |||||||||||||||||||||| Sbjct: 6975 cttccttcttctcctcctcctt 6996
>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete sequence Length = 191255 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 6226 tcttccttcttctcctcctcct 6205
>emb|AL844609.6| Mouse DNA sequence from clone RP23-356F8 on chromosome 4, complete sequence Length = 191676 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 47864 tcttccttcttctcctcctcct 47885
>emb|AL731783.10| Mouse DNA sequence from clone RP23-124E18 on chromosome 2, complete sequence Length = 207209 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcct 233 |||||||||||||||||||||| Sbjct: 60108 tcttccttcttctcctcctcct 60129
>ref|NM_125750.3| Arabidopsis thaliana unknown protein AT5G63550 mRNA, complete cds Length = 1871 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcc 232 ||||||||||||||||||||| Sbjct: 192 tcttccttcttctcctcctcc 172
>gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome 13, complete sequence Length = 179458 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 155453 cttccttcttctcctcctcct 155473
>ref|NM_187845.1| Oryza sativa (japonica cultivar-group), Ozsa8289 predicted mRNA Length = 534 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 242 tccttcttctcctcctccttg 222
>gb|AC163684.5| Mus musculus BAC clone RP23-8N10 from chromosome 13, complete sequence Length = 234717 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 93981 cttccttcttctcctcctcct 94001
>ref|NM_001017204.2| Xenopus tropicalis hypothetical protein LOC549958 (LOC549958), mRNA Length = 480 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 202 ctcctcgggttcttccttcttctcctcctcctt 234 |||||||| ||||||||||||||| || ||||| Sbjct: 380 ctcctcggattcttccttcttctcttcttcctt 348
>gb|AC104414.8| Mus musculus chromosome 3, clone RP23-99I7, complete sequence Length = 212613 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 210 gttcttccttcttctcctcctcctt 234 |||| |||||||||||||||||||| Sbjct: 187965 gttcctccttcttctcctcctcctt 187989
>gb|BT018956.1| Zea mays clone Contig167.F mRNA sequence Length = 1302 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 769 tccttcttctcctcctccttg 749
>gb|AC102270.8| Mus musculus chromosome 3, clone RP24-266A23, complete sequence Length = 185321 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 210 gttcttccttcttctcctcctcctt 234 |||| |||||||||||||||||||| Sbjct: 863 gttcctccttcttctcctcctcctt 887
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 287940 tccttcttctcctcctccttg 287920
>gb|AF039037.2| Caenorhabditis elegans cosmid R02C2, complete sequence Length = 24361 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ttccttcttctcctcctcctt 234 ||||||||||||||||||||| Sbjct: 7058 ttccttcttctcctcctcctt 7038
>gb|AC110567.10| Mus musculus chromosome 5, clone RP23-304I24, complete sequence Length = 188137 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 70989 cttccttcttctcctcctcct 70969
>gb|AY550907.1| Mus musculus embryonic stem cell-related protein mRNA, complete cds Length = 1616 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 gttcttccttcttctcctcctcctt 234 ||||||||| ||||||||||||||| Sbjct: 644 gttcttcctccttctcctcctcctt 620
>ref|NM_001006887.2| Xenopus tropicalis polymerase (RNA) II (DNA directed) polypeptide F (polr2f), mRNA Length = 765 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 202 ctcctcgggttcttccttcttctcctcctcctt 234 |||||||| ||||||||||||||| || ||||| Sbjct: 626 ctcctcggattcttccttcttctcttcttcctt 594
>ref|NM_026560.2| Mus musculus cell division cycle associated 8 (Cdca8), mRNA Length = 1616 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 gttcttccttcttctcctcctcctt 234 ||||||||| ||||||||||||||| Sbjct: 644 gttcttcctccttctcctcctcctt 620
>gb|AC164588.4| Mus musculus chromosome 5, clone RP24-304H2, complete sequence Length = 188602 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctc 231 ||||||||||||||||||||| Sbjct: 122074 ttcttccttcttctcctcctc 122094
>gb|AC161042.4| Mus musculus chromosome 8, clone RP24-278L20, complete sequence Length = 174823 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ttccttcttctcctcctcctt 234 ||||||||||||||||||||| Sbjct: 139145 ttccttcttctcctcctcctt 139125
>gb|AC111125.11| Mus musculus chromosome 9, clone RP23-331P8, complete sequence Length = 260036 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 106089 cttccttcttctcctcctcct 106109
>ref|XM_755686.1| Ustilago maydis 521 hypothetical protein (UM04632.1) partial mRNA Length = 336 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 284 tccttcttctcctcctccttg 264
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 tgcggtgcagcagccatggtg 418 ||||||||||||||||||||| Sbjct: 279864 tgcggtgcagcagccatggtg 279884
>emb|CR974571.9| Mouse DNA sequence from clone RP23-145P19 on chromosome 12, complete sequence Length = 219782 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 87985 cttccttcttctcctcctcct 87965
>ref|XM_572834.1| Cryptococcus neoformans var. neoformans JEC21 polyadenylate-binding protein (CNI01160) partial mRNA Length = 2329 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 2139 tccttcttctcctcctccttg 2119
>gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosome 18, complete sequence Length = 190119 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gcatgacataacattaacata 29 ||||||||||||||||||||| Sbjct: 153707 gcatgacataacattaacata 153687
>gb|AC122199.4| Mus musculus BAC clone RP23-57C9 from chromosome 8, complete sequence Length = 202975 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctc 231 ||||||||||||||||||||| Sbjct: 131092 ttcttccttcttctcctcctc 131112
>ref|XM_812376.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506227.250) partial mRNA Length = 1449 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 ggttcttccttcttctcctcctcct 233 ||||||||||| ||||||||||||| Sbjct: 1408 ggttcttcctttttctcctcctcct 1432
>emb|CR729373.2|CNS0GPQB Tetraodon nigroviridis full-length cDNA Length = 463 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tcgggttcttccttcttctcctcct 230 ||||| ||||||||||||||||||| Sbjct: 435 tcgggctcttccttcttctcctcct 411
>gb|AC011992.3| Homo sapiens BAC clone CTD-2327A23 from 7, complete sequence Length = 80515 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 aacaaacagcataactaattc 64 ||||||||||||||||||||| Sbjct: 60766 aacaaacagcataactaattc 60786
>gb|DQ334167.1| Drosophila miranda CG3620 gene, partial cds Length = 1053 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 749 tccttcttctcctcctccttg 729
>emb|AL138847.14| Human DNA sequence from clone RP5-849H19 on chromosome 1p32.1-33 Contains part of the DOCK7 gene for dedicator of cytokinesis 7, a ribosomal protein L13a (RPL13A) and the ANGPTL3 gene for angiopoietin-like 3, complete sequence Length = 66673 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctc 231 ||||||||||||||||||||| Sbjct: 41512 ttcttccttcttctcctcctc 41492
>emb|BX070623.1|CNS09QNN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC7DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 514 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 290 aacttgctcgggtccttgaggtactccttgatc 322 ||||||||||| ||||||| | ||||||||||| Sbjct: 31 aacttgctcggatccttgatgaactccttgatc 63
>gb|AC160401.8| Mus musculus 10 BAC RP23-244J10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 169912 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 gttcttccttcttctcctcctcctt 234 |||||||||||| |||||||||||| Sbjct: 22787 gttcttccttctcctcctcctcctt 22763
>emb|CR937176.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB2YL14AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 577 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 202 ctcctcgggttcttccttcttctcctcctcctt 234 ||||||||||||||||| ||||| ||| ||||| Sbjct: 396 ctcctcgggttcttcctccttcttctcttcctt 364
>emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on chromosome 11 Contains the 5' end of Ntn1 gene for netrin 1, three genes for a novel proteins (F730038I15Rik), the 3' end of a novel gene (4930535C22Rik) and two CpG islands, complete sequence Length = 221455 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctc 231 ||||||||||||||||||||| Sbjct: 154115 ttcttccttcttctcctcctc 154135
>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence Length = 189532 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcc 232 ||||||||||||||||||||| Sbjct: 126130 tcttccttcttctcctcctcc 126150
>gb|AC163294.2| Mus musculus BAC clone RP23-187J1 from chromosome 9, complete sequence Length = 203706 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 18553 tccttcttctcctcctccttg 18533
>gb|AC018655.5| Homo sapiens 12q BAC RP11-946G22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 16886 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 gttcttccttcttctcctcctcctt 234 |||||||||||||||| |||||||| Sbjct: 10593 gttcttccttcttctcatcctcctt 10569
>gb|AE011648.1| Xanthomonas axonopodis pv. citri str. 306, section 26 of 469 of the complete genome Length = 9977 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 gtgcggtgcagcagccatggt 417 ||||||||||||||||||||| Sbjct: 2529 gtgcggtgcagcagccatggt 2549
>gb|AC023403.9| Homo sapiens chromosome 8, clone RP11-563N12, complete sequence Length = 193461 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 93302 cttccttcttctcctcctcct 93322
>emb|BX664604.6| Zebrafish DNA sequence from clone CH211-253F20 in linkage group 7, complete sequence Length = 150508 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ttccttcttctcctcctcctt 234 ||||||||||||||||||||| Sbjct: 74490 ttccttcttctcctcctcctt 74470
>gb|DQ295222.1| Spironucleus barkhanus cytosolic heat shock protein 90 (HSP90) mRNA, complete cds Length = 2278 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 896 tccttcttctcctcctccttg 876
>gb|AC158998.2| Mus musculus BAC clone RP24-290P19 from chromosome 9, complete sequence Length = 173036 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 75348 tccttcttctcctcctccttg 75368
>dbj|AK076422.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831429J16 product:hypothetical protein, full insert sequence Length = 1603 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 gttcttccttcttctcctcctcctt 234 ||||||||| ||||||||||||||| Sbjct: 644 gttcttcctccttctcctcctcctt 620
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 8232579 tccttcttctcctcctccttg 8232559
>gb|AY826878.1| Heterocapsa triquetra clone HTEFTS1 chloroplast translation factor Ts mRNA, partial cds; nuclear gene for chloroplast product Length = 1657 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 982 tccttcttctcctcctccttg 962
>gb|AC154820.2| Mus musculus BAC clone RP24-536H19 from chromosome 14, complete sequence Length = 148916 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 89861 tccttcttctcctcctccttg 89841
>gb|BT005478.1| Arabidopsis thaliana clone U50052 unknown protein (At5g63550) mRNA, complete cds Length = 1624 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcc 232 ||||||||||||||||||||| Sbjct: 152 tcttccttcttctcctcctcc 132
>gb|BT004149.1| Arabidopsis thaliana clone RAFL15-28-O07 (R50052) unknown protein (At5g63550) mRNA, complete cds Length = 1928 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcc 232 ||||||||||||||||||||| Sbjct: 233 tcttccttcttctcctcctcc 213
>gb|AF274573.4| Homo sapiens chromosome X clone RP11-316K19, RP11-316M19, RP4-687A5 map q28, complete sequence Length = 189436 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 68561 cttccttcttctcctcctcct 68541
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 26510 tccttcttctcctcctccttg 26490
>gb|AC119939.14| Mus musculus chromosome 5, clone RP24-267A23, complete sequence Length = 180700 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctc 231 ||||||||||||||||||||| Sbjct: 43596 ttcttccttcttctcctcctc 43616
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 152951 cttccttcttctcctcctcct 152971
>dbj|AB007649.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLE2 Length = 58527 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcc 232 ||||||||||||||||||||| Sbjct: 56610 tcttccttcttctcctcctcc 56590
>dbj|AK072712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141I08, full insert sequence Length = 1724 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 13 cttccttcttctcctcctcct 33
>emb|CR760503.2| Xenopus tropicalis finished cDNA, clone TEgg006f01 Length = 480 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 202 ctcctcgggttcttccttcttctcctcctcctt 234 |||||||| ||||||||||||||| || ||||| Sbjct: 380 ctcctcggattcttccttcttctcttcttcctt 348
>emb|CR926191.2| Xenopus tropicalis finished cDNA, clone TNeu091i10 Length = 765 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 202 ctcctcgggttcttccttcttctcctcctcctt 234 |||||||| ||||||||||||||| || ||||| Sbjct: 626 ctcctcggattcttccttcttctcttcttcctt 594
>gb|AC152984.2| Mus musculus 6 BAC RP23-462B3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185001 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 58549 cttccttcttctcctcctcct 58529
>emb|AL844544.9| Mouse DNA sequence from clone RP23-230B1 on chromosome 2, complete sequence Length = 156426 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctccttg 235 ||||||||||| ||||||||||||| Sbjct: 8308 ttcttccttctcctcctcctccttg 8332
>gb|AC157656.3| Mus musculus BAC clone RP23-406A5 from chromosome 13, complete sequence Length = 189500 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcc 232 ||||||||||||||||||||| Sbjct: 80383 tcttccttcttctcctcctcc 80363
>gb|AC153945.5| Mus musculus 10 BAC RP24-501G17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179734 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 210 gttcttccttcttctcctcctcctt 234 |||||||||||| |||||||||||| Sbjct: 23456 gttcttccttctcctcctcctcctt 23480 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ttccttcttctcctcctcct 233 |||||||||||||||||||| Sbjct: 55436 ttccttcttctcctcctcct 55455
>emb|AL669920.15| Mouse DNA sequence from clone RP23-263C23 on chromosome 11, complete sequence Length = 216776 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctc 231 ||||||||||||||||||||| Sbjct: 70793 ttcttccttcttctcctcctc 70813
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 gatcgccagggacagggaggc 447 ||||||||||||||||||||| Sbjct: 2090491 gatcgccagggacagggaggc 2090471
>emb|AL731766.27| Mouse DNA sequence from clone RP23-78B19 on chromosome 4, complete sequence Length = 144885 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 44435 tccttcttctcctcctccttg 44455
>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146585 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 115657 cttccttcttctcctcctcct 115677
>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete sequence Length = 201549 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 cttccttcttctcctcctcct 233 ||||||||||||||||||||| Sbjct: 97257 cttccttcttctcctcctcct 97277
>gb|AF045249.1|AF045249 Leishmania peruviana acidic ribosomal protein P1 mRNA, complete cds Length = 628 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 200 tcctcctcgggttcttccttcttctcctcctcc 232 ||||||||||| || |||||||||| ||||||| Sbjct: 312 tcctcctcgggctcctccttcttcttctcctcc 280
>gb|AC159253.3| Mus musculus BAC clone RP24-110K11 from chromosome 3, complete sequence Length = 197735 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctc 231 ||||||||||||||||||||| Sbjct: 66451 ttcttccttcttctcctcctc 66471
>emb|AL808120.9| Mouse DNA sequence from clone RP23-418E2 on chromosome X, complete sequence Length = 148328 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 tccttcttctcctcctccttg 235 ||||||||||||||||||||| Sbjct: 59425 tccttcttctcctcctccttg 59445
>emb|AL929024.9| Mouse DNA sequence from clone RP23-480H10 on chromosome 2, complete sequence Length = 159617 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 gttcttccttcttctcctcctcctt 234 |||||| |||||||||||||||||| Sbjct: 110302 gttctttcttcttctcctcctcctt 110278
>emb|AL831723.8| Mouse DNA sequence from clone RP23-100C7 on chromosome 4, complete sequence Length = 171424 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 tcttccttcttctcctcctcc 232 ||||||||||||||||||||| Sbjct: 150231 tcttccttcttctcctcctcc 150251
>emb|AL669952.8| Mouse DNA sequence from clone RP23-154A15 on chromosome 4, complete sequence Length = 183213 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctcc 232 ||||||||||||||||||||| Sbjct: 102660 tcttccttcttctcctcctcc 102640
>emb|AL837525.5| Mouse DNA sequence from clone RP23-233N12 on chromosome 4, complete sequence Length = 15812 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctc 231 ||||||||||||||||||||| Sbjct: 1927 ttcttccttcttctcctcctc 1947
>emb|AL671858.6| Mouse DNA sequence from clone RP23-341B14 on chromosome 4, complete sequence Length = 121969 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcctc 231 ||||||||||||||||||||| Sbjct: 121896 ttcttccttcttctcctcctc 121916
>gb|AY851302.1| Homarus americanus heat shock protein 90 (hsp90) mRNA, partial cds Length = 1008 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 237 tccttcttctcctcctcctt 218
>gb|AC130283.8| Mus musculus chromosome 15, clone RP23-136E18, complete sequence Length = 180660 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ttccttcttctcctcctcct 233 |||||||||||||||||||| Sbjct: 103875 ttccttcttctcctcctcct 103856
>gb|AC153879.1| Mus musculus BAC RP23-264C21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182252 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 20809 tccttcttctcctcctcctt 20790
>ref|NM_104136.2| Arabidopsis thaliana unknown protein AT1G52580 mRNA, complete cds Length = 1024 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 tcctcgggttcttccttcttctcc 226 ||||||||||| |||||||||||| Sbjct: 707 tcctcgggttcgtccttcttctcc 730
>ref|NM_116307.3| Arabidopsis thaliana structural constituent of ribosome AT4G00810 transcript variant AT4G00810.1 mRNA, complete cds Length = 676 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 cgggttcttccttcttctcctcct 230 ||||||| |||||||||||||||| Sbjct: 405 cgggttcgtccttcttctcctcct 382
>ref|NM_178947.2| Arabidopsis thaliana structural constituent of ribosome AT4G00810 transcript variant AT4G00810.2 mRNA, complete cds Length = 598 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 cgggttcttccttcttctcctcct 230 ||||||| |||||||||||||||| Sbjct: 327 cgggttcgtccttcttctcctcct 304
>gb|AC165230.12| Mus musculus chromosome 1, clone RP23-65C14, complete sequence Length = 174156 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 85720 tccttcttctcctcctcctt 85701
>gb|AC154375.2| Mus musculus BAC clone RP23-69H21 from chromosome 12, complete sequence Length = 169125 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcctt 234 ||||||||||| |||||||||||| Sbjct: 75147 ttcttccttctcctcctcctcctt 75124
>gb|AC151736.6| Mus musculus BAC clone RP23-9L16 from chromosome 8, complete sequence Length = 239812 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctc 231 |||||||||||||||||||| Sbjct: 120298 tcttccttcttctcctcctc 120279
>gb|AC163612.3| Mus musculus BAC clone RP23-89N5 from chromosome 16, complete sequence Length = 207953 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ttcttccttcttctcctcct 230 |||||||||||||||||||| Sbjct: 116462 ttcttccttcttctcctcct 116481
>gb|AC168116.3| Mus musculus BAC clone RP24-108N24 from chromosome 1, complete sequence Length = 158847 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcct 230 |||||||||||||||||||| Sbjct: 6877 ttcttccttcttctcctcct 6858
>gb|AC159286.3| Mus musculus BAC clone RP23-314E22 from chromosome 14, complete sequence Length = 210984 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 174071 tccttcttctcctcctcctt 174090
>gb|AC168217.2| Mus musculus BAC clone RP24-498P8 from chromosome 9, complete sequence Length = 171426 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ttccttcttctcctcctcct 233 |||||||||||||||||||| Sbjct: 139516 ttccttcttctcctcctcct 139535
>gb|AC160986.5| Mus musculus BAC clone RP23-258K21 from chromosome 6, complete sequence Length = 209886 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 64100 tccttcttctcctcctcctt 64081
>gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosome 17, complete sequence Length = 217187 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 71198 tccttcttctcctcctcctt 71179
>gb|AC153585.16| Mus musculus 6 BAC RP23-432A17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 162497 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 ttcttccttcttctcctcctcctt 234 ||||||||||| |||||||||||| Sbjct: 109664 ttcttccttctcctcctcctcctt 109641
>ref|XM_466417.1| Oryza sativa (japonica cultivar-group), mRNA Length = 330 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctccttg 235 ||||||||||||||||||| |||| Sbjct: 251 tcttccttcttctcctccttcttg 228
>gb|AC117643.15| Mus musculus chromosome 8, clone RP23-237I20, complete sequence Length = 186799 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 tcttccttcttctcctcctc 231 |||||||||||||||||||| Sbjct: 127471 tcttccttcttctcctcctc 127452
>gb|AC119874.12| Mus musculus chromosome 8, clone RP24-289B21, complete sequence Length = 170702 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 27585 tccttcttctcctcctcctt 27604 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 27450 tccttcttctcctcctcctt 27469 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 27329 tccttcttctcctcctcctt 27348 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tccttcttctcctcctcctt 234 |||||||||||||||||||| Sbjct: 27261 tccttcttctcctcctcctt 27280 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,675,226 Number of Sequences: 3902068 Number of extensions: 4675226 Number of successful extensions: 153894 Number of sequences better than 10.0: 1745 Number of HSP's better than 10.0 without gapping: 1754 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 147907 Number of HSP's gapped (non-prelim): 5721 length of query: 488 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 466 effective length of database: 17,147,199,772 effective search space: 7990595093752 effective search space used: 7990595093752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
