ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart33g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BC049330.1| Danio rerio zgc:56567, mRNA (cDNA clone MGC:56567... 52 0.001
2ref|NM_213416.1| Danio rerio zgc:56567 (zgc:56567), mRNA 52 0.001
3emb|CR847923.8| Zebrafish DNA sequence from clone DKEY-231N3 in ... 52 0.001
4gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence 50 0.006
5gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence 46 0.088
6gb|BT016442.1| Zea mays clone Contig275 mRNA sequence 44 0.35
7gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence 44 0.35
8ref|XM_762125.1| Giardia lamblia ATCC 50803 hypothetical protein... 44 0.35
9ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
10ref|XM_479573.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
11ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
12ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
13ref|NM_172378.1| Mus musculus cDNA sequence BC026439 (BC026439),... 42 1.4
14gb|BT016654.1| Zea mays clone Contig487 mRNA sequence 42 1.4
15gb|AC124678.7| Mus musculus chromosome 15, clone RP24-107K17, co... 42 1.4
16gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 1.4
17gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.4
18gb|BC026439.1| Mus musculus cDNA sequence BC026439, mRNA (cDNA c... 42 1.4
19gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.4
20dbj|AK030222.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 1.4
21dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
22dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
23dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
24emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene 42 1.4
25emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene 42 1.4
26emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 42 1.4
27dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
28dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
29dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
30dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
31gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
32gb|L20773.1|HUMBTK Homo sapiens mRNA in the region near the btk ... 42 1.4
33gb|AC159008.2| Mus musculus BAC clone RP23-14E14 from chromosome... 40 5.4
34gb|L29074.1|HUMFMR1S Homo sapiens fragile X mental retardation s... 40 5.4
35gb|AC152938.3| Mus musculus BAC clone RP23-469O12 from chromosom... 40 5.4
36emb|AJ879635.1| Bos taurus microsatellite DNA, clone RP42-249E18... 40 5.4
37emb|AL031884.1|DMC23E12 Drosophila melanogaster cosmid clone 23E12 40 5.4
38dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.4
39gb|AC006054.2| Homo sapiens Xq28 BAC GS1-382P7 (Roswell Park Can... 40 5.4
40dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
41dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
42emb|AL807827.11| Zebrafish DNA sequence from clone CH211-220J6, ... 40 5.4
43emb|CT574568.2| Pan troglodytes chromosome X clone PTB-081L12 ma... 40 5.4
44gb|AE003417.4| Drosophila melanogaster chromosome X, section 1 o... 40 5.4
45gb|AC165322.12| Mus musculus chromosome 1, clone RP23-127J15, co... 40 5.4
46emb|AL513351.26| Mouse DNA sequence from clone RP23-122P5 on chr... 40 5.4 
>gb|BC049330.1| Danio rerio zgc:56567, mRNA (cDNA clone MGC:56567 IMAGE:5914824),
            complete cds
          Length = 1823

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 234  ttcttcatcttgccgttgagagcgtt 259
            ||||||||||||||||||||||||||
Sbjct: 1204 ttcttcatcttgccgttgagagcgtt 1179
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>ref|NM_213416.1| Danio rerio zgc:56567 (zgc:56567), mRNA
          Length = 1823

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 234  ttcttcatcttgccgttgagagcgtt 259
            ||||||||||||||||||||||||||
Sbjct: 1204 ttcttcatcttgccgttgagagcgtt 1179
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>emb|CR847923.8| Zebrafish DNA sequence from clone DKEY-231N3 in linkage group 11,
            complete sequence
          Length = 101731

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 234  ttcttcatcttgccgttgagagcgtt 259
            ||||||||||||||||||||||||||
Sbjct: 4834 ttcttcatcttgccgttgagagcgtt 4859
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>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence
          Length = 778

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 76/93 (81%)
 Strand = Plus / Minus

                                                                       
Query: 255 gcgttgaatttgaggcggatgttggtggccatgcggatgcacccgaagccgccgcccatg 314
           |||| ||| ||||||||||||||| |  ||||||||||||| | ||||||   ||||| |
Sbjct: 588 gcgtcgaagttgaggcggatgttgttcaccatgcggatgcagcggaagcccttgcccacg 529

                                            
Query: 315 tcgcggcctacagtccactgcaccgactcgtcc 347
           |||| ||   | |||||| ||||||||||||||
Sbjct: 528 tcgccgctctccgtccacagcaccgactcgtcc 496
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>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence
          Length = 666

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 83/103 (80%)
 Strand = Plus / Minus

                                                                       
Query: 245 gccgttgagagcgttgaatttgaggcggatgttggtggccatgcggatgcacccgaagcc 304
           ||||| ||| |||| ||| ||||||  ||||||| || ||||||||| ||| | ||||||
Sbjct: 340 gccgtggagggcgtcgaagttgaggtagatgttgttgaccatgcggacgcagcggaagcc 281

                                                      
Query: 305 gccgcccatgtcgcggcctacagtccactgcaccgactcgtcc 347
           |  ||| | ||||||||   | |||||| ||||||||||||||
Sbjct: 280 gttgccgacgtcgcggctctccgtccacagcaccgactcgtcc 238
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>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence
          Length = 1443

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 255 gcgttgaatttgaggcggatgttggtggccatgcggatgcacccgaagcc 304
           |||| ||| ||||||||| ||||| || ||||||||||||| | ||||||
Sbjct: 465 gcgtcgaagttgaggcgggtgttgttgaccatgcggatgcagcggaagcc 416
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>gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence
          Length = 690

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 255 gcgttgaatttgaggcggatgttggtggccatgcggatgcacccgaagcc 304
           |||| ||| ||||||||| ||||| || ||||||||||||| | ||||||
Sbjct: 215 gcgtcgaagttgaggcgggtgttgttgaccatgcggatgcagcggaagcc 166
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>ref|XM_762125.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_223_13462_17727)
            partial mRNA
          Length = 4266

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 224  tgccttgcccttcttcatcttg 245
            ||||||||||||||||||||||
Sbjct: 3712 tgccttgcccttcttcatcttg 3691
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>ref|NM_187532.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1122

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 327 gtccactgcaccgactcgtccgggt 351
           |||||| ||||||||||||||||||
Sbjct: 362 gtccacagcaccgactcgtccgggt 338
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>ref|XM_479573.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 988

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 283 ccatgcggatgcacccgaagccgccgcccatgtcgcggcctacagtccactgcaccgact 342
           ||||||||||||||| ||| |||   |||| ||||||||   | |||||| |||||||||
Sbjct: 577 ccatgcggatgcacctgaacccgttccccacgtcgcggctctccgtccacagcaccgact 518

                
Query: 343 cgtcc 347
           |||||
Sbjct: 517 cgtcc 513
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>ref|XM_479572.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1239

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 264 ttgaggcggatgttggtggccatgcggatgcacccgaagcc 304
           ||||||||| ||||| || ||||||||||||| | ||||||
Sbjct: 263 ttgaggcgggtgttgttgaccatgcggatgcagcggaagcc 223
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>ref|XM_479571.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1511

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 264 ttgaggcggatgttggtggccatgcggatgcacccgaagcc 304
           ||||||||| ||||| || ||||||||||||| | ||||||
Sbjct: 478 ttgaggcgggtgttgttgaccatgcggatgcagcggaagcc 438
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>ref|NM_172378.1| Mus musculus cDNA sequence BC026439 (BC026439), mRNA
          Length = 2369

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 224  tgccttgcccttcttcatctt 244
            |||||||||||||||||||||
Sbjct: 1234 tgccttgcccttcttcatctt 1254
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>gb|BT016654.1| Zea mays clone Contig487 mRNA sequence
          Length = 905

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 75/93 (80%)
 Strand = Plus / Minus

                                                                       
Query: 255 gcgttgaatttgaggcggatgttggtggccatgcggatgcacccgaagccgccgcccatg 314
           |||| ||| ||||||  ||||||| || ||||||||| ||| | |||||||  ||| | |
Sbjct: 453 gcgtcgaagttgaggtagatgttgttgaccatgcggacgcagcggaagccgtggccgacg 394

                                            
Query: 315 tcgcggcctacagtccactgcaccgactcgtcc 347
           |||||||   | |||||| ||||||||||||||
Sbjct: 393 tcgcggctctccgtccacagcaccgactcgtcc 361
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>gb|AC124678.7| Mus musculus chromosome 15, clone RP24-107K17, complete sequence
          Length = 137248

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 224   tgccttgcccttcttcatctt 244
             |||||||||||||||||||||
Sbjct: 34292 tgccttgcccttcttcatctt 34312
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 299     gaagccgccgcccatgtcgcg 319
               |||||||||||||||||||||
Sbjct: 2794580 gaagccgccgcccatgtcgcg 2794600
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 327      gtccactgcaccgactcgtccgggt 351
                |||||| ||||||||||||||||||
Sbjct: 11932146 gtccacagcaccgactcgtccgggt 11932170
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>gb|BC026439.1| Mus musculus cDNA sequence BC026439, mRNA (cDNA clone MGC:31374
           IMAGE:4239636), complete cds
          Length = 2029

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 224 tgccttgcccttcttcatctt 244
           |||||||||||||||||||||
Sbjct: 877 tgccttgcccttcttcatctt 897
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 301     agccgccgcccatgtcgcggc 321
               |||||||||||||||||||||
Sbjct: 1833925 agccgccgcccatgtcgcggc 1833945
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>dbj|AK030222.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4933425E16 product:hypothetical General
            substrate transporters containing protein, full insert
            sequence
          Length = 2369

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 224  tgccttgcccttcttcatctt 244
            |||||||||||||||||||||
Sbjct: 1234 tgccttgcccttcttcatctt 1254
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                            
Query: 283      ccatgcggatgcacccgaagccgccgcccatgtcgcggcctacagtccactgcaccgact 342
                ||||||||||||||| ||| |||   |||| ||||||||   | |||||| |||||||||
Sbjct: 28955954 ccatgcggatgcacctgaacccgttccccacgtcgcggctctccgtccacagcaccgact 28955895

                     
Query: 343      cgtcc 347
                |||||
Sbjct: 28955894 cgtcc 28955890



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 264      ttgaggcggatgttggtggccatgcggatgcacccgaagcc 304
                ||||||||| ||||| || ||||||||||||| | ||||||
Sbjct: 28951314 ttgaggcgggtgttgttgaccatgcggatgcagcggaagcc 28951274
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 327      gtccactgcaccgactcgtccgggt 351
                |||||| ||||||||||||||||||
Sbjct: 11928909 gtccacagcaccgactcgtccgggt 11928933
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>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0060O17
          Length = 180015

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 283   ccatgcggatgcacccgaagccgccgcccatgtcgcggcctacagtccactgcaccgact 342
             ||||||||||||||| ||| |||   |||| ||||||||   | |||||| |||||||||
Sbjct: 73491 ccatgcggatgcacctgaacccgttccccacgtcgcggctctccgtccacagcaccgact 73432

                  
Query: 343   cgtcc 347
             |||||
Sbjct: 73431 cgtcc 73427



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 264   ttgaggcggatgttggtggccatgcggatgcacccgaagcc 304
             ||||||||| ||||| || ||||||||||||| | ||||||
Sbjct: 68851 ttgaggcgggtgttgttgaccatgcggatgcagcggaagcc 68811
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>emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene
          Length = 1531

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 283  ccatgcggatgcacccgaagccgccgcccatgtcgcggcctacagtccactgcaccgact 342
            ||||||||||||||| ||| |||   |||| ||||||||   | |||||| |||||||||
Sbjct: 1194 ccatgcggatgcacctgaacccgttccccacgtcgcggctctccgtccacagcaccgact 1135

                 
Query: 343  cgtcc 347
            |||||
Sbjct: 1134 cgtcc 1130
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>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene
          Length = 2101

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 264  ttgaggcggatgttggtggccatgcggatgcacccgaagcc 304
            ||||||||| ||||| || ||||||||||||| | ||||||
Sbjct: 1241 ttgaggcgggtgttgttgaccatgcggatgcagcggaagcc 1201
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>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1
          Length = 1458

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 327 gtccactgcaccgactcgtccgggt 351
           |||||| ||||||||||||||||||
Sbjct: 424 gtccacagcaccgactcgtccgggt 400
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>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full
           insert sequence
          Length = 1512

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 264 ttgaggcggatgttggtggccatgcggatgcacccgaagcc 304
           ||||||||| ||||| || ||||||||||||| | ||||||
Sbjct: 478 ttgaggcgggtgttgttgaccatgcggatgcagcggaagcc 438
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>dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K15, full
           insert sequence
          Length = 987

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 283 ccatgcggatgcacccgaagccgccgcccatgtcgcggcctacagtccactgcaccgact 342
           ||||||||||||||| ||| |||   |||| ||||||||   | |||||| |||||||||
Sbjct: 576 ccatgcggatgcacctgaacccgttccccacgtcgcggctctccgtccacagcaccgact 517

                
Query: 343 cgtcc 347
           |||||
Sbjct: 516 cgtcc 512
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>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full
           insert sequence
          Length = 1765

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 327 gtccactgcaccgactcgtccgggt 351
           |||||| ||||||||||||||||||
Sbjct: 437 gtccacagcaccgactcgtccgggt 413
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>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full
           insert sequence
          Length = 1239

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 264 ttgaggcggatgttggtggccatgcggatgcacccgaagcc 304
           ||||||||| ||||| || ||||||||||||| | ||||||
Sbjct: 263 ttgaggcgggtgttgttgaccatgcggatgcagcggaagcc 223
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>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0014I10, complete sequence
          Length = 113946

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 327   gtccactgcaccgactcgtccgggt 351
             |||||| ||||||||||||||||||
Sbjct: 33408 gtccacagcaccgactcgtccgggt 33432
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>gb|L20773.1|HUMBTK Homo sapiens mRNA in the region near the btk gene involved in
           a-gamma-globulinemia
          Length = 1560

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 208 attgggagtgctcggttgccttgcc 232
           |||||| ||||||||||||||||||
Sbjct: 362 attgggtgtgctcggttgccttgcc 338
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>gb|AC159008.2| Mus musculus BAC clone RP23-14E14 from chromosome 7, complete sequence
          Length = 239149

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    cttattaaacattaaacaca 79
             ||||||||||||||||||||
Sbjct: 22276 cttattaaacattaaacaca 22257
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>gb|L29074.1|HUMFMR1S Homo sapiens fragile X mental retardation syndrome protein (FMR1) gene,
              alternative splice products, complete cds; and  pseudogene,
              complete sequence
          Length = 185775

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     ttaaacattaaacacagtat 83
              ||||||||||||||||||||
Sbjct: 181549 ttaaacattaaacacagtat 181530
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>gb|AC152938.3| Mus musculus BAC clone RP23-469O12 from chromosome 7, complete sequence
          Length = 183468

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     cttattaaacattaaacaca 79
              ||||||||||||||||||||
Sbjct: 153884 cttattaaacattaaacaca 153865
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>emb|AJ879635.1| Bos taurus microsatellite DNA, clone RP42-249E18, subclone MS2
          Length = 1789

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 ggttgccttgcccttcttca 240
           ||||||||||||||||||||
Sbjct: 787 ggttgccttgcccttcttca 806
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>emb|AL031884.1|DMC23E12 Drosophila melanogaster cosmid clone 23E12
          Length = 37906

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    cagaacacttattaaacatt 72
             ||||||||||||||||||||
Sbjct: 16022 cagaacacttattaaacatt 16041
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 302     gccgccgcccatgtcgcggc 321
               ||||||||||||||||||||
Sbjct: 4090789 gccgccgcccatgtcgcggc 4090770



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 302     gccgccgcccatgtcgcggc 321
               ||||||||||||||||||||
Sbjct: 1686056 gccgccgcccatgtcgcggc 1686075
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>gb|AC006054.2| Homo sapiens Xq28 BAC GS1-382P7 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 143738

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    ttaaacattaaacacagtat 83
             ||||||||||||||||||||
Sbjct: 87804 ttaaacattaaacacagtat 87823
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 163      gcaagcacgacgagcagtag 182
                ||||||||||||||||||||
Sbjct: 33280322 gcaagcacgacgagcagtag 33280341
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>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1070A12
          Length = 148449

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   gcaagcacgacgagcagtag 182
             ||||||||||||||||||||
Sbjct: 73569 gcaagcacgacgagcagtag 73588
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>emb|AL807827.11| Zebrafish DNA sequence from clone CH211-220J6, complete sequence
          Length = 199141

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aacacttattaaacattaaa 75
              ||||||||||||||||||||
Sbjct: 164575 aacacttattaaacattaaa 164594
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>emb|CT574568.2| Pan troglodytes chromosome X clone PTB-081L12 map Xq28, complete
             sequence
          Length = 199100

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    ttaaacattaaacacagtat 83
             ||||||||||||||||||||
Sbjct: 11803 ttaaacattaaacacagtat 11784
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>gb|AE003417.4| Drosophila melanogaster chromosome X, section 1 of 74 of the complete
             sequence
          Length = 387740

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    cagaacacttattaaacatt 72
             ||||||||||||||||||||
Sbjct: 19035 cagaacacttattaaacatt 19054
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>gb|AC165322.12| Mus musculus chromosome 1, clone RP23-127J15, complete sequence
          Length = 185278

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 371  cttcaccagctccacagggt 390
            ||||||||||||||||||||
Sbjct: 7724 cttcaccagctccacagggt 7743
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>emb|AL513351.26| Mouse DNA sequence from clone RP23-122P5 on chromosome 1, complete
              sequence
          Length = 224628

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 371    cttcaccagctccacagggt 390
              ||||||||||||||||||||
Sbjct: 154004 cttcaccagctccacagggt 154023


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,993,839
Number of Sequences: 3902068
Number of extensions: 2993839
Number of successful extensions: 59810
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59535
Number of HSP's gapped (non-prelim): 268
length of query: 406
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 384
effective length of database: 17,147,199,772
effective search space: 6584524712448
effective search space used: 6584524712448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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