Clone Information

BLAST Search Result

Clone Name	rbart33f12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AB159037.1\| Lolium rigidum mRNA for P450, complete cds, clon...	210	3e-51
2	gb\|AF321856.1\|AF321856 Lolium rigidum clone FHH-t putative cytoc...	202	7e-49
3	gb\|AF321857.1\|AF321857 Lolium rigidum clone FHH-y putative cytoc...	194	2e-46
4	dbj\|AB159038.1\| Lolium rigidum mRNA for P450, complete cds, clon...	194	2e-46
5	dbj\|AB159039.1\| Lolium rigidum mRNA for P450, complete cds, clon...	186	4e-44
6	gb\|AF321855.1\|AF321855 Lolium rigidum clone FHH-v putative cytoc...	178	1e-41
7	ref\|XM_469850.1\| Oryza sativa (japonica cultivar-group), mRNA	127	3e-26
8	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	127	3e-26
9	gb\|AC084282.6\| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom...	127	3e-26
10	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	127	3e-26
11	gb\|DQ341412.1\| Oryza sativa (indica cultivar-group) bentazon and...	127	3e-26
12	dbj\|AK104825.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	127	3e-26
13	dbj\|AK066760.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	127	3e-26
14	ref\|XM_469849.1\| Oryza sativa (japonica cultivar-group), mRNA	105	1e-19
15	gb\|AY109406.1\| Zea mays CL377_1 mRNA sequence	82	2e-12
16	gb\|AY110147.1\| Zea mays CL377_-3 mRNA sequence	76	1e-10
17	gb\|AC083805.17\| Homo sapiens 12 BAC RP11-620J15 (Roswell Park Ca...	46	0.10
18	emb\|BX640446.1\| Bordetella bronchiseptica strain RB50, complete ...	42	1.6
19	emb\|BX640441.1\| Bordetella bronchiseptica strain RB50, complete ...	42	1.6
20	emb\|BX640431.1\| Bordetella parapertussis strain 12822, complete ...	42	1.6
21	emb\|BX640429.1\| Bordetella parapertussis strain 12822, complete ...	42	1.6
22	emb\|BX640417.1\| Bordetella pertussis strain Tohama I, complete g...	42	1.6
23	emb\|BX677665.17\| Zebrafish DNA sequence from clone DKEY-25M3 in ...	42	1.6
24	gb\|AC092376.3\| Homo sapiens chromosome 16 clone RP11-679B19, com...	42	1.6
25	dbj\|BA000012.4\| Mesorhizobium loti MAFF303099 DNA, complete genome	42	1.6
26	gb\|AY109431.1\| Zea mays CL313_1 mRNA sequence	42	1.6
27	gb\|AC151731.4\| Mus musculus BAC clone RP23-401H13 from chromosom...	40	6.2
28	gb\|AC166488.5\| Mus musculus chromosome 1, clone RP23-245C4, comp...	40	6.2
29	gb\|AC133217.2\| Oryza sativa (japonica cultivar-group) chromosome...	40	6.2
30	gb\|AE017283.1\| Propionibacterium acnes KPA171202, complete genome	40	6.2
31	ref\|XM_370079.1\| Magnaporthe grisea 70-15 hypothetical protein (...	40	6.2
32	gb\|CP000285.1\| Chromohalobacter salexigens DSM 3043, complete ge...	40	6.2
33	gb\|BT014012.1\| Lycopersicon esculentum clone 133074F, mRNA sequence	40	6.2
34	ref\|XM_381816.1\| Gibberella zeae PH-1 chromosome 1 hypothetical ...	40	6.2
35	gb\|AC123797.3\| Mus musculus BAC clone RP24-326O4 from chromosome...	40	6.2
36	gb\|AF318041.1\| Gluconacetobacter diazotrophicus regulatory prote...	40	6.2
37	gb\|AF318040.1\| Gluconacetobacter diazotrophicus regulatory prote...	40	6.2
38	ref\|XM_537559.2\| PREDICTED: Canis familiaris similar to RAP2C, m...	40	6.2
39	emb\|AL645501.8\| Human DNA sequence from clone RP11-141J3 on chro...	40	6.2
40	emb\|AL596085.2\| Human DNA sequence from clone RP11-240E19 on chr...	40	6.2
41	emb\|AL590452.12\| Human DNA sequence from clone RP11-326G21 on ch...	40	6.2
42	gb\|AC092853.18\| Mus musculus strain 129/SvJ clone mgs1-271d8 map...	40	6.2
43	emb\|BX572598.1\| Rhodopseudomonas palustris CGA009 complete genom...	40	6.2
44	gb\|AC183687.3\| Pan troglodytes BAC clone CH251-25N14 from chromo...	40	6.2
45	gb\|AE012388.1\| Xanthomonas campestris pv. campestris str. ATCC 3...	40	6.2
46	gb\|AC096915.2\| Homo sapiens chromosome 3 clone RP11-24H1, comple...	40	6.2
47	gb\|AC093115.2\| Homo sapiens chromosome 3 clone RP11-360G1, compl...	40	6.2
48	gb\|CP000050.1\| Xanthomonas campestris pv. campestris str. 8004, ...	40	6.2
49	gb\|CP000250.1\| Rhodopseudomonas palustris HaA2, complete genome	40	6.2
50	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	6.2
51	gb\|AC009733.5\|AC009733 Drosophila melanogaster, chromosome 3R, r...	40	6.2
52	gb\|CP000251.1\| Anaeromyxobacter dehalogenans 2CP-C, complete genome	40	6.2
53	gb\|AC012519.9\|AC012519 Homo sapiens 3 BAC RP11-1036F1 (Roswell P...	40	6.2
54	gb\|AC137976.13\| Mus musculus chromosome 8, clone RP23-262K12, co...	40	6.2
55	gb\|CP000009.1\| Gluconobacter oxydans 621H, complete genome	40	6.2
56	gb\|AE003772.2\| Drosophila melanogaster chromosome 3R, section 11...	40	6.2
57	gb\|AE016825.1\| Chromobacterium violaceum ATCC 12472, complete ge...	40	6.2
58	gb\|AE016958.1\| Mycobacterium avium subsp. paratuberculosis str. ...	40	6.2
59	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	40	6.2
60	dbj\|AP005270.2\| Homo sapiens genomic DNA, chromosome 18 clone:RP...	40	6.2
61	gb\|AE014295.3\| Bifidobacterium longum NCC2705, complete genome	40	6.2
62	emb\|AL713983.9\| Mouse DNA sequence from clone RP23-244C21 on chr...	40	6.2

>dbj|AB159037.1| Lolium rigidum mRNA for P450, complete cds, clone:CYP81B1v1
          Length = 1554

 Score =  210 bits (106), Expect = 3e-51
 Identities = 172/194 (88%)
 Strand = Plus / Minus

                                                                        
Query: 267  agaggctctggagcacgtcgcgcatggccgcgcgcggcctgcagacggcctcgagcggca 326
            ||||| |||| ||||||||||||||| |||||||||||||||| |||||||| | |||||
Sbjct: 1552 agaggttctgaagcacgtcgcgcatgaccgcgcgcggcctgcacacggcctccaacggca 1493

                                                                        
Query: 327  cggccttggggatggtgagcccgccgctctccgtcatgtccacctccttgccgtcgacgc 386
            ||||||| |||||||||| ||| || | ||||||||||||||||| |  |||||| ||  
Sbjct: 1492 cggcctttgggatggtgaaccctcccccctccgtcatgtccaccttcacgccgtccaccg 1433

                                                                        
Query: 387  ggtcccagtcgaagcactgcaccagcgtggccagcaccatgccgatggtccgcagcgcca 446
            | |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 1432 gttcccagtcgaagcactgcaccagcgtcgccaggaccattccgatggtccgcagcgcca 1373

                          
Query: 447  gcgtctctccgggg 460
            ||||||| ||||||
Sbjct: 1372 gcgtctccccgggg 1359

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>gb|AF321856.1|AF321856 Lolium rigidum clone FHH-t putative cytochrome P450 mRNA, complete
            cds
          Length = 1775

 Score =  202 bits (102), Expect = 7e-49
 Identities = 171/194 (88%)
 Strand = Plus / Minus

                                                                        
Query: 267  agaggctctggagcacgtcgcgcatggccgcgcgcggcctgcagacggcctcgagcggca 326
            ||||| |||| ||||||||||||||| |||||||||||||||| |||||||| | |||||
Sbjct: 1583 agaggttctgaagcacgtcgcgcatgaccgcgcgcggcctgcacacggcctccaacggca 1524

                                                                        
Query: 327  cggccttggggatggtgagcccgccgctctccgtcatgtccacctccttgccgtcgacgc 386
            ||||||| |||||||||| ||| || | ||||||||||||||||| |  |||||| ||  
Sbjct: 1523 cggcctttgggatggtgaaccctcccccctccgtcatgtccaccttcacgccgtccaccg 1464

                                                                        
Query: 387  ggtcccagtcgaagcactgcaccagcgtggccagcaccatgccgatggtccgcagcgcca 446
            | |||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||
Sbjct: 1463 gttcccagtcgaagcactgcaccagcgtcgccaggaccattccgatcgtccgcagcgcca 1404

                          
Query: 447  gcgtctctccgggg 460
            ||||||| ||||||
Sbjct: 1403 gcgtctccccgggg 1390

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>gb|AF321857.1|AF321857 Lolium rigidum clone FHH-y putative cytochrome P450 mRNA, complete
            cds
          Length = 1810

 Score =  194 bits (98), Expect = 2e-46
 Identities = 167/190 (87%)
 Strand = Plus / Minus

                                                                        
Query: 271  gctctggagcacgtcgcgcatggccgcgcgcggcctgcagacggcctcgagcggcacggc 330
            |||||| ||||||||||||||| |||||||||||||||| |||||||| | |||||||||
Sbjct: 1585 gctctgaagcacgtcgcgcatgaccgcgcgcggcctgcacacggcctccaacggcacggc 1526

                                                                        
Query: 331  cttggggatggtgagcccgccgctctccgtcatgtccacctccttgccgtcgacgcggtc 390
            ||| |||||||||| ||| || | ||||||||||||||| | |  |||||| ||  | ||
Sbjct: 1525 ctttgggatggtgaaccctcccccctccgtcatgtccacattcacgccgtccaccggttc 1466

                                                                        
Query: 391  ccagtcgaagcactgcaccagcgtggccagcaccatgccgatggtccgcagcgccagcgt 450
            |||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 1465 ccagtcgaagcactgcaccagcgtcgccaggaccattccgatcgtccgcagcgccagcgt 1406

                      
Query: 451  ctctccgggg 460
            ||| ||||||
Sbjct: 1405 ctccccgggg 1396

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>dbj|AB159038.1| Lolium rigidum mRNA for P450, complete cds, clone:CYP81B1v2
          Length = 1554

 Score =  194 bits (98), Expect = 2e-46
 Identities = 170/194 (87%)
 Strand = Plus / Minus

                                                                        
Query: 267  agaggctctggagcacgtcgcgcatggccgcgcgcggcctgcagacggcctcgagcggca 326
            ||||| |||| ||||||||||||||| ||| |||||||||||| |||||||| | |||||
Sbjct: 1552 agaggttctgaagcacgtcgcgcatgaccgtgcgcggcctgcacacggcctccaacggca 1493

                                                                        
Query: 327  cggccttggggatggtgagcccgccgctctccgtcatgtccacctccttgccgtcgacgc 386
            ||||||| |||||||||| ||| || | ||||||||||||||||| |  |||||| ||  
Sbjct: 1492 cggcctttgggatggtgaaccctcccccctccgtcatgtccaccttcacgccgtccaccg 1433

                                                                        
Query: 387  ggtcccagtcgaagcactgcaccagcgtggccagcaccatgccgatggtccgcagcgcca 446
            | |||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||
Sbjct: 1432 gttcccagtcgaagcactgcaccagcgtcgccaggaccattccgatcgtccgcagcgcca 1373

                          
Query: 447  gcgtctctccgggg 460
            ||||||| ||||||
Sbjct: 1372 gcgtctccccgggg 1359

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>dbj|AB159039.1| Lolium rigidum mRNA for P450, complete cds, clone:CYP81B1v3
          Length = 1554

 Score =  186 bits (94), Expect = 4e-44
 Identities = 169/194 (87%)
 Strand = Plus / Minus

                                                                        
Query: 267  agaggctctggagcacgtcgcgcatggccgcgcgcggcctgcagacggcctcgagcggca 326
            ||||| |||| ||||||||||||||| |||||||||||||||| |||||||| | |||||
Sbjct: 1552 agaggttctgaagcacgtcgcgcatgaccgcgcgcggcctgcacacggcctccaacggca 1493

                                                                        
Query: 327  cggccttggggatggtgagcccgccgctctccgtcatgtccacctccttgccgtcgacgc 386
            ||||||| |||||||||| ||| || | ||||||||||||||||| |  |||||| ||  
Sbjct: 1492 cggcctttgggatggtgaaccctcccccctccgtcatgtccaccttcacgccgtccaccg 1433

                                                                        
Query: 387  ggtcccagtcgaagcactgcaccagcgtggccagcaccatgccgatggtccgcagcgcca 446
            | |||||||||||||||||||||||||| || || ||||||| ||| ||||| |||||||
Sbjct: 1432 gttcccagtcgaagcactgcaccagcgtcgctaggaccatgctgattgtccgtagcgcca 1373

                          
Query: 447  gcgtctctccgggg 460
            ||||||| ||||||
Sbjct: 1372 gcgtctccccgggg 1359

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>gb|AF321855.1|AF321855 Lolium rigidum clone FHH-v putative cytochrome P450 mRNA, complete
            cds
          Length = 1795

 Score =  178 bits (90), Expect = 1e-41
 Identities = 168/194 (86%)
 Strand = Plus / Minus

                                                                        
Query: 267  agaggctctggagcacgtcgcgcatggccgcgcgcggcctgcagacggcctcgagcggca 326
            ||||| |||| ||||||||||||||| || ||||||||||||| |||||||| | |||||
Sbjct: 1583 agaggttctgaagcacgtcgcgcatgaccacgcgcggcctgcacacggcctccaacggca 1524

                                                                        
Query: 327  cggccttggggatggtgagcccgccgctctccgtcatgtccacctccttgccgtcgacgc 386
            ||||||| |||||||||| ||| || | ||| ||||||||||||| |  |||||| ||  
Sbjct: 1523 cggcctttgggatggtgaaccctcccccctctgtcatgtccaccttcacgccgtccaccg 1464

                                                                        
Query: 387  ggtcccagtcgaagcactgcaccagcgtggccagcaccatgccgatggtccgcagcgcca 446
            | |||||||||||||||||||||||||| ||||| ||||||||||| ||||| || || |
Sbjct: 1463 gttcccagtcgaagcactgcaccagcgtcgccaggaccatgccgatcgtccgtagtgcta 1404

                          
Query: 447  gcgtctctccgggg 460
            ||||||||||||||
Sbjct: 1403 gcgtctctccgggg 1390

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>ref|XM_469850.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2199

 Score =  127 bits (64), Expect = 3e-26
 Identities = 139/164 (84%)
 Strand = Plus / Minus

                                                                        
Query: 297  cgcgcggcctgcagacggcctcgagcggcacggccttggggatggtgagcccgccgctct 356
            ||||||||||||| | |||||| | ||||||| |||||||||||||||||||||| |  |
Sbjct: 2164 cgcgcggcctgcacatggcctccaacggcacgaccttggggatggtgagcccgccacctt 2105

                                                                        
Query: 357  ccgtcatgtccacctccttgccgtcgacgcggtcccagtcgaagcactgcaccagcgtgg 416
            | |||||||| ||||||  ||||||||| |  ||||||||||||||||| | ||||||| 
Sbjct: 2104 cagtcatgtcgacctccacgccgtcgaccctctcccagtcgaagcactggatcagcgtgc 2045

                                                        
Query: 417  ccagcaccatgccgatggtccgcagcgccagcgtctctccgggg 460
            |||||||||  || |  || ||||||||||||||||| ||||||
Sbjct: 2044 ccagcaccaaccccactgtgcgcagcgccagcgtctcgccgggg 2001

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  127 bits (64), Expect = 3e-26
 Identities = 139/164 (84%)
 Strand = Plus / Minus

                                                                            
Query: 297      cgcgcggcctgcagacggcctcgagcggcacggccttggggatggtgagcccgccgctct 356
                ||||||||||||| | |||||| | ||||||| |||||||||||||||||||||| |  |
Sbjct: 31141816 cgcgcggcctgcacatggcctccaacggcacgaccttggggatggtgagcccgccacctt 31141757

                                                                            
Query: 357      ccgtcatgtccacctccttgccgtcgacgcggtcccagtcgaagcactgcaccagcgtgg 416
                | |||||||| ||||||  ||||||||| |  ||||||||||||||||| | ||||||| 
Sbjct: 31141756 cagtcatgtcgacctccacgccgtcgaccctctcccagtcgaagcactggatcagcgtgc 31141697

                                                            
Query: 417      ccagcaccatgccgatggtccgcagcgccagcgtctctccgggg 460
                |||||||||  || |  || ||||||||||||||||| ||||||
Sbjct: 31141696 ccagcaccaaccccactgtgcgcagcgccagcgtctcgccgggg 31141653



 Score =  105 bits (53), Expect = 1e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                            
Query: 297      cgcgcggcctgcagacggcctcgagcggcacggccttggggatggtgagcccgccgctct 356
                ||||||||||||| |||||||| | ||||||| ||||||| |||||||||||||| | ||
Sbjct: 31135231 cgcgcggcctgcacacggcctccaacggcacgaccttgggcatggtgagcccgccaccct 31135172

                                                                            
Query: 357      ccgtcatgtccacctccttgccgtcgacgcggtcccagtcgaagcactgcaccagcgtgg 416
                | | |||||| ||||||  ||| ||||| |  ||||||||||||||||| | ||||||| 
Sbjct: 31135171 cagccatgtcgacctccacgccatcgaccctctcccagtcgaagcactggatcagcgtgc 31135112

                         
Query: 417      ccagcacca 425
                |||||||||
Sbjct: 31135111 ccagcacca 31135103

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>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete
             sequence
          Length = 128017

 Score =  127 bits (64), Expect = 3e-26
 Identities = 139/164 (84%)
 Strand = Plus / Minus

                                                                         
Query: 297   cgcgcggcctgcagacggcctcgagcggcacggccttggggatggtgagcccgccgctct 356
             ||||||||||||| | |||||| | ||||||| |||||||||||||||||||||| |  |
Sbjct: 62457 cgcgcggcctgcacatggcctccaacggcacgaccttggggatggtgagcccgccacctt 62398

                                                                         
Query: 357   ccgtcatgtccacctccttgccgtcgacgcggtcccagtcgaagcactgcaccagcgtgg 416
             | |||||||| ||||||  ||||||||| |  ||||||||||||||||| | ||||||| 
Sbjct: 62397 cagtcatgtcgacctccacgccgtcgaccctctcccagtcgaagcactggatcagcgtgc 62338

                                                         
Query: 417   ccagcaccatgccgatggtccgcagcgccagcgtctctccgggg 460
             |||||||||  || |  || ||||||||||||||||| ||||||
Sbjct: 62337 ccagcaccaaccccactgtgcgcagcgccagcgtctcgccgggg 62294



 Score =  105 bits (53), Expect = 1e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                         
Query: 297   cgcgcggcctgcagacggcctcgagcggcacggccttggggatggtgagcccgccgctct 356
             ||||||||||||| |||||||| | ||||||| ||||||| |||||||||||||| | ||
Sbjct: 55872 cgcgcggcctgcacacggcctccaacggcacgaccttgggcatggtgagcccgccaccct 55813

                                                                         
Query: 357   ccgtcatgtccacctccttgccgtcgacgcggtcccagtcgaagcactgcaccagcgtgg 416
             | | |||||| ||||||  ||| ||||| |  ||||||||||||||||| | ||||||| 
Sbjct: 55812 cagccatgtcgacctccacgccatcgaccctctcccagtcgaagcactggatcagcgtgc 55753

                      
Query: 417   ccagcacca 425
             |||||||||
Sbjct: 55752 ccagcacca 55744

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  127 bits (64), Expect = 3e-26
 Identities = 139/164 (84%)
 Strand = Plus / Minus

                                                                            
Query: 297      cgcgcggcctgcagacggcctcgagcggcacggccttggggatggtgagcccgccgctct 356
                ||||||||||||| | |||||| | ||||||| |||||||||||||||||||||| |  |
Sbjct: 31232339 cgcgcggcctgcacatggcctccaacggcacgaccttggggatggtgagcccgccacctt 31232280

                                                                            
Query: 357      ccgtcatgtccacctccttgccgtcgacgcggtcccagtcgaagcactgcaccagcgtgg 416
                | |||||||| ||||||  ||||||||| |  ||||||||||||||||| | ||||||| 
Sbjct: 31232279 cagtcatgtcgacctccacgccgtcgaccctctcccagtcgaagcactggatcagcgtgc 31232220

                                                            
Query: 417      ccagcaccatgccgatggtccgcagcgccagcgtctctccgggg 460
                |||||||||  || |  || ||||||||||||||||| ||||||
Sbjct: 31232219 ccagcaccaaccccactgtgcgcagcgccagcgtctcgccgggg 31232176



 Score =  105 bits (53), Expect = 1e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                            
Query: 297      cgcgcggcctgcagacggcctcgagcggcacggccttggggatggtgagcccgccgctct 356
                ||||||||||||| |||||||| | ||||||| ||||||| |||||||||||||| | ||
Sbjct: 31225754 cgcgcggcctgcacacggcctccaacggcacgaccttgggcatggtgagcccgccaccct 31225695

                                                                            
Query: 357      ccgtcatgtccacctccttgccgtcgacgcggtcccagtcgaagcactgcaccagcgtgg 416
                | | |||||| ||||||  ||| ||||| |  ||||||||||||||||| | ||||||| 
Sbjct: 31225694 cagccatgtcgacctccacgccatcgaccctctcccagtcgaagcactggatcagcgtgc 31225635

                         
Query: 417      ccagcacca 425
                |||||||||
Sbjct: 31225634 ccagcacca 31225626

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>gb|DQ341412.1| Oryza sativa (indica cultivar-group) bentazon and
            sulfonylurea-resistant protein (Bel) gene, promoter
            region and complete cds
          Length = 4187

 Score =  127 bits (64), Expect = 3e-26
 Identities = 139/164 (84%)
 Strand = Plus / Minus

                                                                        
Query: 297  cgcgcggcctgcagacggcctcgagcggcacggccttggggatggtgagcccgccgctct 356
            ||||||||||||| | |||||| | ||||||| |||||||||||||||||||||| |  |
Sbjct: 3592 cgcgcggcctgcacatggcctccaacggcacgaccttggggatggtgagcccgccacctt 3533

                                                                        
Query: 357  ccgtcatgtccacctccttgccgtcgacgcggtcccagtcgaagcactgcaccagcgtgg 416
            | |||||||| ||||||  ||||||||| |  ||||||||||||||||| | ||||||| 
Sbjct: 3532 cagtcatgtcgacctccacgccgtcgaccctctcccagtcgaagcactggatcagcgtgc 3473

                                                        
Query: 417  ccagcaccatgccgatggtccgcagcgccagcgtctctccgggg 460
            |||||||||  || |  || ||||||||||||||||| ||||||
Sbjct: 3472 ccagcaccaaccccactgtgcgcagcgccagcgtctcgccgggg 3429

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>dbj|AK104825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F09, full
            insert sequence
          Length = 1860

 Score =  127 bits (64), Expect = 3e-26
 Identities = 139/164 (84%)
 Strand = Plus / Minus

                                                                        
Query: 297  cgcgcggcctgcagacggcctcgagcggcacggccttggggatggtgagcccgccgctct 356
            ||||||||||||| | |||||| | ||||||| |||||||||||||||||||||| |  |
Sbjct: 1559 cgcgcggcctgcacatggcctccaacggcacgaccttggggatggtgagcccgccacctt 1500

                                                                        
Query: 357  ccgtcatgtccacctccttgccgtcgacgcggtcccagtcgaagcactgcaccagcgtgg 416
            | |||||||| ||||||  ||||||||| |  ||||||||||||||||| | ||||||| 
Sbjct: 1499 cagtcatgtcgacctccacgccgtcgaccctctcccagtcgaagcactggatcagcgtgc 1440

                                                        
Query: 417  ccagcaccatgccgatggtccgcagcgccagcgtctctccgggg 460
            |||||||||  || |  || ||||||||||||||||| ||||||
Sbjct: 1439 ccagcaccaaccccactgtgcgcagcgccagcgtctcgccgggg 1396

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>dbj|AK066760.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075G04, full
            insert sequence
          Length = 1867

 Score =  127 bits (64), Expect = 3e-26
 Identities = 139/164 (84%)
 Strand = Plus / Minus

                                                                        
Query: 297  cgcgcggcctgcagacggcctcgagcggcacggccttggggatggtgagcccgccgctct 356
            ||||||||||||| | |||||| | ||||||| |||||||||||||||||||||| |  |
Sbjct: 1560 cgcgcggcctgcacatggcctccaacggcacgaccttggggatggtgagcccgccacctt 1501

                                                                        
Query: 357  ccgtcatgtccacctccttgccgtcgacgcggtcccagtcgaagcactgcaccagcgtgg 416
            | |||||||| ||||||  ||||||||| |  ||||||||||||||||| | ||||||| 
Sbjct: 1500 cagtcatgtcgacctccacgccgtcgaccctctcccagtcgaagcactggatcagcgtgc 1441

                                                        
Query: 417  ccagcaccatgccgatggtccgcagcgccagcgtctctccgggg 460
            |||||||||  || |  || ||||||||||||||||| ||||||
Sbjct: 1440 ccagcaccaaccccactgtgcgcagcgccagcgtctcgccgggg 1397

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>ref|XM_469849.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1539

 Score =  105 bits (53), Expect = 1e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                        
Query: 297  cgcgcggcctgcagacggcctcgagcggcacggccttggggatggtgagcccgccgctct 356
            ||||||||||||| |||||||| | ||||||| ||||||| |||||||||||||| | ||
Sbjct: 1507 cgcgcggcctgcacacggcctccaacggcacgaccttgggcatggtgagcccgccaccct 1448

                                                                        
Query: 357  ccgtcatgtccacctccttgccgtcgacgcggtcccagtcgaagcactgcaccagcgtgg 416
            | | |||||| ||||||  ||| ||||| |  ||||||||||||||||| | ||||||| 
Sbjct: 1447 cagccatgtcgacctccacgccatcgaccctctcccagtcgaagcactggatcagcgtgc 1388

                     
Query: 417  ccagcacca 425
            |||||||||
Sbjct: 1387 ccagcacca 1379

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>gb|AY109406.1| Zea mays CL377_1 mRNA sequence
          Length = 1784

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                        
Query: 388  gtcccagtcgaagcactgcaccagcgtggccagcaccatgccgatggtccgcagcgccag 447
            |||||||||||||||||| | ||||||||| |||||||  |||| |||||||||||| ||
Sbjct: 1504 gtcccagtcgaagcactggagcagcgtggcgagcaccagcccgacggtccgcagcgcgag 1445

                         
Query: 448  cgtctctccgggg 460
            |||||| ||||||
Sbjct: 1444 cgtctccccgggg 1432

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>gb|AY110147.1| Zea mays CL377_-3 mRNA sequence
          Length = 620

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 140/174 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 cgcatggccgcgcgcggcctgcagacggcctcgagcggcacggccttggggatggtgagc 346
           ||||||||  |||| ||| |||||  |||||| | ||| ||||||  ||| |||||||||
Sbjct: 460 cgcatggcttcgcgaggcttgcaggtggcctccaacgggacggcccggggcatggtgagc 401

                                                                       
Query: 347 ccgccgctctccgtcatgtccacctccttgccgtcgacgcggtcccagtcgaagcactgc 406
           ||||||||||| |||||||| | |||   ||| ||||  | |||||||| ||||||||| 
Sbjct: 400 ccgccgctctcggtcatgtcgatctcagcgccatcgatcctgtcccagtggaagcactgg 341

                                                                 
Query: 407 accagcgtggccagcaccatgccgatggtccgcagcgccagcgtctctccgggg 460
           |  |||||||| ||||| | ||||  |||||||||||| || ||||| ||||||
Sbjct: 340 atgagcgtggcgagcacgaggccggcggtccgcagcgcgagtgtctccccgggg 287

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>gb|AC083805.17| Homo sapiens 12 BAC RP11-620J15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 104816

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 35    ttatttccattttgcaattacaa 57
             |||||||||||||||||||||||
Sbjct: 15823 ttatttccattttgcaattacaa 15845

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>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 403    ctgcaccagcgtggccagcac 423
              |||||||||||||||||||||
Sbjct: 237570 ctgcaccagcgtggccagcac 237590

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>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 410    agcgtggccagcaccatgccgatgg 434
              |||||||||||||| ||||||||||
Sbjct: 238190 agcgtggccagcacgatgccgatgg 238166

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>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 403    ctgcaccagcgtggccagcac 423
              |||||||||||||||||||||
Sbjct: 253524 ctgcaccagcgtggccagcac 253544

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>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 410    agcgtggccagcaccatgccgatgg 434
              |||||||||||||| ||||||||||
Sbjct: 183882 agcgtggccagcacgatgccgatgg 183858

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>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 403    ctgcaccagcgtggccagcac 423
              |||||||||||||||||||||
Sbjct: 218394 ctgcaccagcgtggccagcac 218414

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>emb|BX677665.17| Zebrafish DNA sequence from clone DKEY-25M3 in linkage group 12, complete
              sequence
          Length = 136144

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 85     gctgaatcatacaaattgctggttt 109
              ||||||||||||| |||||||||||
Sbjct: 133793 gctgaatcatacacattgctggttt 133817

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>gb|AC092376.3| Homo sapiens chromosome 16 clone RP11-679B19, complete sequence
          Length = 168083

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 31     ttttttatttccattttgcaa 51
              |||||||||||||||||||||
Sbjct: 121996 ttttttatttccattttgcaa 121976

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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 406     caccagcgtggccagcaccatgccgatgg 434
               ||||||| ||| |||||||||||||||||
Sbjct: 3405694 caccagcttggtcagcaccatgccgatgg 3405722

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>gb|AY109431.1| Zea mays CL313_1 mRNA sequence
          Length = 2617

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 389 tcccagtcgaagcactgcaccagcg 413
           ||||||| |||||||||||||||||
Sbjct: 244 tcccagtggaagcactgcaccagcg 220

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>gb|AC151731.4| Mus musculus BAC clone RP23-401H13 from chromosome 9, complete sequence
          Length = 193536

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    catcagatcagaggctctgg 277
              ||||||||||||||||||||
Sbjct: 191553 catcagatcagaggctctgg 191534

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>gb|AC166488.5| Mus musculus chromosome 1, clone RP23-245C4, complete sequence
          Length = 194413

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     ctccctagttttttatttcc 42
              ||||||||||||||||||||
Sbjct: 107258 ctccctagttttttatttcc 107239

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>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0052H02, complete sequence
          Length = 159632

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 430    gatggtccgcagcgccagcg 449
              ||||||||||||||||||||
Sbjct: 103828 gatggtccgcagcgccagcg 103847

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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 416     gccagcaccatgccgatggt 435
               ||||||||||||||||||||
Sbjct: 2083859 gccagcaccatgccgatggt 2083878

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>ref|XM_370079.1| Magnaporthe grisea 70-15 hypothetical protein (MG06594.4) partial
           mRNA
          Length = 1287

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 tcatgtccacctccttgccg 379
           ||||||||||||||||||||
Sbjct: 532 tcatgtccacctccttgccg 513

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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 417     ccagcaccatgccgatggtc 436
               ||||||||||||||||||||
Sbjct: 3224116 ccagcaccatgccgatggtc 3224135

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>gb|BT014012.1| Lycopersicon esculentum clone 133074F, mRNA sequence
          Length = 1330

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  tacaaactagctacctagat 137
            ||||||||||||||||||||
Sbjct: 1129 tacaaactagctacctagat 1110

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>ref|XM_381816.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01640.1)
           partial mRNA
          Length = 1422

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 ctccgtcatgtccacctcct 374
           ||||||||||||||||||||
Sbjct: 259 ctccgtcatgtccacctcct 278

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>gb|AC123797.3| Mus musculus BAC clone RP24-326O4 from chromosome 9, complete sequence
          Length = 135119

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    catcagatcagaggctctgg 277
              ||||||||||||||||||||
Sbjct: 127590 catcagatcagaggctctgg 127609

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>gb|AF318041.1| Gluconacetobacter diazotrophicus regulatory protein GlnK2 (glnK2)
           gene, complete cds; and ammonium transporter AmtB2
           (amtB2) gene, partial cds
          Length = 900

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 396 cgaagcactgcaccagcgtggccagcac 423
           ||||| |||||| |||||||||||||||
Sbjct: 883 cgaaggactgcatcagcgtggccagcac 856

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>gb|AF318040.1| Gluconacetobacter diazotrophicus regulatory protein GlnK1 (glnK1)
           and ammonium transporter AmtB1 (amtB1) genes, complete
           cds
          Length = 2159

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 396 cgaagcactgcaccagcgtggccagcac 423
           ||||| |||||| |||||||||||||||
Sbjct: 936 cgaaggactgcatcagcgtggccagcac 909

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>ref|XM_537559.2| PREDICTED: Canis familiaris similar to RAP2C, member of RAS
           oncogene family (LOC480441), mRNA
          Length = 603

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 cgagcggcacggccttgggg 337
           ||||||||||||||||||||
Sbjct: 358 cgagcggcacggccttgggg 339

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>emb|AL645501.8| Human DNA sequence from clone RP11-141J3 on chromosome 1, complete
             sequence
          Length = 43075

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    tttttatttccattttgcaa 51
             ||||||||||||||||||||
Sbjct: 25128 tttttatttccattttgcaa 25109

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>emb|AL596085.2| Human DNA sequence from clone RP11-240E19 on chromosome 13, complete
            sequence
          Length = 20448

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   tttttatttccattttgcaa 51
            ||||||||||||||||||||
Sbjct: 8548 tttttatttccattttgcaa 8567

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>emb|AL590452.12| Human DNA sequence from clone RP11-326G21 on chromosome 1 Contains the 5'
              end of the PDE4DIP gene for phosphodiesterase 4D
              interacting protein (myomegalin) and a CpG island, complete
              sequence
          Length = 156813

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     tttttatttccattttgcaa 51
              ||||||||||||||||||||
Sbjct: 141452 tttttatttccattttgcaa 141471

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>gb|AC092853.18| Mus musculus strain 129/SvJ clone mgs1-271d8 map X, complete sequence
          Length = 203118

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 24     tccctagttttttatttccatttt 47
              ||||||||||||| ||||||||||
Sbjct: 111886 tccctagttttttttttccatttt 111909

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>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16
          Length = 346879

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   gccagcaccatgccgatggt 435
             ||||||||||||||||||||
Sbjct: 16698 gccagcaccatgccgatggt 16717

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>gb|AC183687.3| Pan troglodytes BAC clone CH251-25N14 from chromosome 1, complete
             sequence
          Length = 192054

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tttttatttccattttgcaa 51
             ||||||||||||||||||||
Sbjct: 79333 tttttatttccattttgcaa 79352

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>gb|AE012388.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 296
            of 460 of the complete genome
          Length = 10043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 406  caccagcgtggccagcaccatgcc 429
            ||||| ||||||||||||||||||
Sbjct: 8405 caccaacgtggccagcaccatgcc 8428

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>gb|AC096915.2| Homo sapiens chromosome 3 clone RP11-24H1, complete sequence
          Length = 170162

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    gatacaagctgaatcataca 97
             ||||||||||||||||||||
Sbjct: 16513 gatacaagctgaatcataca 16532

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>gb|AC093115.2| Homo sapiens chromosome 3 clone RP11-360G1, complete sequence
          Length = 173493

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     gatacaagctgaatcataca 97
              ||||||||||||||||||||
Sbjct: 156859 gatacaagctgaatcataca 156878

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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 406     caccagcgtggccagcaccatgcc 429
               ||||| ||||||||||||||||||
Sbjct: 1645170 caccaacgtggccagcaccatgcc 1645147

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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 428     ccgatggtccgcagcgccagcgtc 451
               ||||||||| ||||||||||||||
Sbjct: 1782044 ccgatggtctgcagcgccagcgtc 1782021

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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 430     gatggtccgcagcgccagcg 449
               ||||||||||||||||||||
Sbjct: 2824021 gatggtccgcagcgccagcg 2824040

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>gb|AC009733.5|AC009733 Drosophila melanogaster, chromosome 3R, region 99E-99E, BAC clone
             BACR05L15, complete sequence
          Length = 181056

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 28    tagttttttatttccattttgcaa 51
             |||||||| |||||||||||||||
Sbjct: 62642 tagtttttcatttccattttgcaa 62665

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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 277    gagcacgtcgcgcatggccg 296
              ||||||||||||||||||||
Sbjct: 490522 gagcacgtcgcgcatggccg 490541

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>gb|AC012519.9|AC012519 Homo sapiens 3 BAC RP11-1036F1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184447

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     gatacaagctgaatcataca 97
              ||||||||||||||||||||
Sbjct: 156863 gatacaagctgaatcataca 156882

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>gb|AC137976.13| Mus musculus chromosome 8, clone RP23-262K12, complete sequence
          Length = 238720

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    tccctagttttttatttccatttt 47
             ||||||||||||| ||||||||||
Sbjct: 90243 tccctagttttttttttccatttt 90266

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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 415     ggccagcaccatgccgatgg 434
               ||||||||||||||||||||
Sbjct: 2299624 ggccagcaccatgccgatgg 2299643

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>gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 110 of 118 of the complete
              sequence
          Length = 228443

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     tagttttttatttccattttgcaa 51
              |||||||| |||||||||||||||
Sbjct: 132183 tagtttttcatttccattttgcaa 132206

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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 396     cgaagcactgcaccagcgtggccagcac 423
               |||||| ||||| |||||||||||||||
Sbjct: 4330113 cgaagctctgcatcagcgtggccagcac 4330086

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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 414     tggccagcaccatgccgatg 433
               ||||||||||||||||||||
Sbjct: 3521261 tggccagcaccatgccgatg 3521280

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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 430     gatggtccgcagcgccagcg 449
               ||||||||||||||||||||
Sbjct: 2833052 gatggtccgcagcgccagcg 2833071

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>dbj|AP005270.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-291B19, complete
              sequence
          Length = 200493

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     gttttttatttccattttgc 49
              ||||||||||||||||||||
Sbjct: 121918 gttttttatttccattttgc 121937

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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    tggccagcaccatgccgatg 433
              ||||||||||||||||||||
Sbjct: 964555 tggccagcaccatgccgatg 964536

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>emb|AL713983.9| Mouse DNA sequence from clone RP23-244C21 on chromosome X, complete
              sequence
          Length = 148335

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 24     tccctagttttttatttccatttt 47
              ||||||||||||| ||||||||||
Sbjct: 143010 tccctagttttttttttccatttt 143033


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,947,011
Number of Sequences: 3902068
Number of extensions: 3947011
Number of successful extensions: 85108
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83768
Number of HSP's gapped (non-prelim): 1331
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result