>UL52_EBV (P03193) Helicase/primase complex protein (Probable DNA replication|
           protein BSLF1)
          Length = 874

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 255 SKHVRTYVRRRTALAMHITHANVRTRMEHLLFFRWIGSP 139
           ++H+RTY  R T LA H+    ++ RME    + W   P
Sbjct: 312 AEHMRTYFTRETYLAEHVRVQQLKIRMEPPAPYTWDPDP 350

>NUOA_BUCBP (Q89AU6) NADH-quinone oxidoreductase chain A (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain A) (NDH-1, chain A)
          Length = 132

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 116 WGFLAFFFVVIKTCVIMIML 57
           W F  FFF+ +  CV M+ +
Sbjct: 12  WAFFTFFFIAVSICVFMLSI 31

>IFRD1_MOUSE (P19182) Interferon-related developmental regulator 1 (Nerve growth|
           factor-inducible protein PC4) (TPA-induced sequence 7)
           (TIS7 protein)
          Length = 449

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 200 VICM-ASAVRRRTYVRTCLLLCSYLDTGERPQIHNNLKCF 316
           +IC  A++++ R    TC  +C ++ T +  ++++ L+CF
Sbjct: 174 IICDGAASIQARQTCATCFGVCCFIATDDITELYSTLECF 213

>SRA21_CAEEL (O18690) Serpentine receptor class alpha-21 (Protein sra-21)|
          Length = 339

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/65 (24%), Positives = 30/65 (46%)
 Frame = -2

Query: 245 YVRTYDDALHLPCISRMQTYVHAWNICYSFDGSGLLPVCVHFTWGFLAFFFVVIKTCVIM 66
           +   Y  A+ L  +  + T V  +   Y    +G +PVC+H+    LA  +  + T   +
Sbjct: 145 HTHQYFIAVSLLVLQLLLTLVSFYIAYYGVHLAGYVPVCIHYP--RLAVHYSTVNTVRTV 202

Query: 65  IMLVC 51
           +M+ C
Sbjct: 203 VMVCC 207

>ZN759_HUMAN (Q8NAF0) Zinc finger protein 579|
          Length = 562

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
 Frame = +2

Query: 137 GGDPIHRKNNKCSMRVRTFACVICMA-----SAVRRRTYVRTCLL---LCSYLDTGERPQ 292
           GG P   K ++CS+ ++ FA    ++      +  R      C L   L SYL    R  
Sbjct: 261 GGPPPRPKRHQCSICLKAFARPWSLSRHRLVHSTDRPFVCPDCGLAFRLASYLRQHRR-- 318

Query: 293 IHNNLKCFLPLPAASK 340
           +H  L    PLPAA K
Sbjct: 319 VHGPLSLLAPLPAAGK 334


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,991,677
Number of Sequences: 219361
Number of extensions: 1254148
Number of successful extensions: 2748
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2742
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)