ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart33f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1URIC_ARATH (O04420) Uricase (EC 1.7.3.3) (Urate oxidase) (Noduli... 62 1e-09
2URIC_PHAVU (P53763) Uricase-2 (EC 1.7.3.3) (Uricase II) (Urate o... 51 2e-06
3URIC2_SOYBN (O04104) Uricase-2 isozyme 2 (EC 1.7.3.3) (Uricase I... 49 5e-06
4URIC1_SOYBN (P04670) Uricase-2 isozyme 1 (EC 1.7.3.3) (Uricase I... 49 9e-06
5URIC2_CANLI (P34799) Uricase-2 isozyme 2 (EC 1.7.3.3) (Uricase I... 48 1e-05
6URIC1_CANLI (P34798) Uricase-2 isozyme 1 (EC 1.7.3.3) (Uricase I... 44 2e-04
7URIC_DROVI (P23194) Uricase (EC 1.7.3.3) (Urate oxidase) 34 0.18
8URIC_DROPS (P22673) Uricase (EC 1.7.3.3) (Urate oxidase) 32 0.90
9URIC_DROSU (O44111) Uricase (EC 1.7.3.3) (Urate oxidase) (Fragment) 32 0.90
10URIC_DROME (P16163) Uricase (EC 1.7.3.3) (Urate oxidase) 32 0.90
11Y1618_AQUAE (O67545) Hypothetical protein aq_1618 30 4.4

>URIC_ARATH (O04420) Uricase (EC 1.7.3.3) (Urate oxidase) (Nodulin 35 homolog)|
          Length = 309

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -3

Query: 484 KENPGLVKFADDVYMPTDEPHGTIEATLSRANSK 383
           KENP +VKF DDVY+PTDEPHG+IEATLSR  SK
Sbjct: 275 KENPSMVKFKDDVYLPTDEPHGSIEATLSRITSK 308



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>URIC_PHAVU (P53763) Uricase-2 (EC 1.7.3.3) (Uricase II) (Urate oxidase)|
           (Nodule-specific uricase)
          Length = 308

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = -3

Query: 484 KENPGLVKFADDVYMPTDEPHGTIEATLSRANSK 383
           K+ P +VKF DDVY+PTDEPHG+IEA+LSR  SK
Sbjct: 275 KDGP-IVKFEDDVYLPTDEPHGSIEASLSRVWSK 307



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>URIC2_SOYBN (O04104) Uricase-2 isozyme 2 (EC 1.7.3.3) (Uricase II isozyme 2)|
           (Urate oxidase) (Nodulin 35) (N-35) (Non-symbiotic
           uricase)
          Length = 309

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 23/34 (67%), Positives = 29/34 (85%)
 Frame = -3

Query: 484 KENPGLVKFADDVYMPTDEPHGTIEATLSRANSK 383
           K+ P +VKF DDVY+PTDEPHG+I+A+LSR  SK
Sbjct: 276 KDGP-IVKFEDDVYLPTDEPHGSIQASLSRLWSK 308



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>URIC1_SOYBN (P04670) Uricase-2 isozyme 1 (EC 1.7.3.3) (Uricase II isozyme 1)|
           (Urate oxidase) (Nodulin 35) (N-35) (Nodule-specific
           uricase)
          Length = 309

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = -3

Query: 469 LVKFADDVYMPTDEPHGTIEATLSRANSK 383
           +VKF DDVY+PTDEPHG+I+A+LSR  SK
Sbjct: 280 IVKFEDDVYLPTDEPHGSIQASLSRLWSK 308



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>URIC2_CANLI (P34799) Uricase-2 isozyme 2 (EC 1.7.3.3) (Uricase II clone|
           pcClNUO-02) (Urate oxidase)
          Length = 301

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = -3

Query: 484 KENPGLVKFADDVYMPTDEPHGTIEATLSRANSK 383
           K+ P +VKF DDVY PTDEPHG+I+A+LSR  SK
Sbjct: 268 KDGP-IVKFDDDVYFPTDEPHGSIQASLSRLWSK 300



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>URIC1_CANLI (P34798) Uricase-2 isozyme 1 (EC 1.7.3.3) (Uricase II clone|
           pcClNUO-01) (Urate oxidase)
          Length = 308

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = -3

Query: 484 KENPGLVKFADDVYMPTDEPHGTIEATLSRANSK 383
           K+ P +VKF  DVY+PTDEPHG+I+A+L R  SK
Sbjct: 275 KDGP-IVKFEADVYLPTDEPHGSIQASLRRLWSK 307



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>URIC_DROVI (P23194) Uricase (EC 1.7.3.3) (Urate oxidase)|
          Length = 342

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = -3

Query: 454 DDVYMPTDEPHGTIEATLSRANSK 383
           ++V++PTD+PHGTI A LSR + K
Sbjct: 316 NEVFIPTDKPHGTIYAQLSRKSLK 339



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>URIC_DROPS (P22673) Uricase (EC 1.7.3.3) (Urate oxidase)|
          Length = 345

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = -3

Query: 454 DDVYMPTDEPHGTIEATLSRAN 389
           ++V++P D+PHGTI A L+R N
Sbjct: 319 NEVFIPVDKPHGTIYAQLARKN 340



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>URIC_DROSU (O44111) Uricase (EC 1.7.3.3) (Urate oxidase) (Fragment)|
          Length = 339

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = -3

Query: 454 DDVYMPTDEPHGTIEATLSRAN 389
           ++V++P D+PHGTI A L+R N
Sbjct: 313 NEVFIPVDKPHGTIYAQLARKN 334



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>URIC_DROME (P16163) Uricase (EC 1.7.3.3) (Urate oxidase)|
          Length = 352

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = -3

Query: 454 DDVYMPTDEPHGTIEATLSRAN 389
           ++V++P D+PHGTI A L+R N
Sbjct: 326 NEVFIPVDKPHGTIYAQLARKN 347



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>Y1618_AQUAE (O67545) Hypothetical protein aq_1618|
          Length = 413

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -1

Query: 162 CSTCLLFNRGNLYFFFFGTLGV*MRSFHVSRFNVIWFLL 46
           CS C+LF  G L  FFF        SF +S F V++ LL
Sbjct: 238 CSLCVLFFTGTLMLFFFPHFSY-SYSFWLSFFAVLYILL 275


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,888,612
Number of Sequences: 219361
Number of extensions: 1418386
Number of successful extensions: 2623
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2623
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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