Clone Name | rbart33f07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_760893.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_0466) partial mRNA Length = 8583 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 taatcaatttcagagagttta 185 ||||||||||||||||||||| Sbjct: 4898 taatcaatttcagagagttta 4878
>gb|AC096755.2| Homo sapiens BAC clone RP11-519M16 from 4, complete sequence Length = 182440 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 aactggacttaaaaatttgct 69 ||||||||||||||||||||| Sbjct: 175821 aactggacttaaaaatttgct 175801
>gb|AC150428.3| Branchiostoma floridae clone CH302-86J11, complete sequence Length = 193518 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 tcatcataaattcttcttca 150 |||||||||||||||||||| Sbjct: 6039 tcatcataaattcttcttca 6020
>gb|AC129591.4| Mus musculus BAC clone RP24-510A3 from chromosome 14, complete sequence Length = 176214 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tttgctgaggacaggaggaa 83 |||||||||||||||||||| Sbjct: 85177 tttgctgaggacaggaggaa 85158
>ref|XM_805678.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053511605.20) partial mRNA Length = 1128 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gacaggaggaacatgaggaa 92 |||||||||||||||||||| Sbjct: 335 gacaggaggaacatgaggaa 354
>emb|AL161901.18| Human DNA sequence from clone RP11-521H3 on chromosome 13 Contains a novel gene and a eukaryotic translation initiation factor 4A, variant 1 (EIF4A1) pseudogene, complete sequence Length = 150054 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ttcatcataaattcttcttc 149 |||||||||||||||||||| Sbjct: 44193 ttcatcataaattcttcttc 44212
>gb|AC007112.6| Arabidopsis thaliana chromosome 2 clone F24C20 map mi398, complete sequence Length = 96371 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 tcatcataaattcttcttca 150 |||||||||||||||||||| Sbjct: 36369 tcatcataaattcttcttca 36350
>emb|BX649423.7| Zebrafish DNA sequence from clone DKEY-18O7 in linkage group 4, complete sequence Length = 182374 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 ttttgaagtttggattgcaa 50 |||||||||||||||||||| Sbjct: 30014 ttttgaagtttggattgcaa 30033
>gb|AC150390.2| Branchiostoma floridae clone CH302-115N8, complete sequence Length = 230518 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 tcatcataaattcttcttca 150 |||||||||||||||||||| Sbjct: 41489 tcatcataaattcttcttca 41470 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,117,733 Number of Sequences: 3902068 Number of extensions: 2117733 Number of successful extensions: 136302 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 136280 Number of HSP's gapped (non-prelim): 22 length of query: 218 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 196 effective length of database: 17,147,199,772 effective search space: 3360851155312 effective search space used: 3360851155312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)