Clone Name | rbart33e11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RPTN_HUMAN (Q6XPR3) Repetin | 30 | 2.7 | 2 | LEG3_HUMAN (P17931) Galectin-3 (Galactose-specific lectin 3) (Ma... | 30 | 2.7 | 3 | CTTB2_CALJA (Q2QLF8) Cortactin-binding protein 2 (CortBP2) | 28 | 7.9 |
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>RPTN_HUMAN (Q6XPR3) Repetin| Length = 784 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%) Frame = -2 Query: 441 GASSDQGEPAPQGGAEHFGRRAQQPQ-----DTPREPMTAHFLRRDR 316 G SS G+P Q + H+G+ +Q Q T R+ ++H+ + DR Sbjct: 374 GQSSHYGQPDTQDQSSHYGQTDRQDQSSHYGQTERQGQSSHYSQMDR 420 Score = 29.3 bits (64), Expect = 4.6 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%) Frame = -2 Query: 441 GASSDQGEPAPQGGAEHFGRRAQQPQ-----DTPREPMTAHFLRRDR 316 G SS G+P QG H+G+ +Q Q T R+ ++H+ + D+ Sbjct: 434 GQSSHYGQPDRQGQNSHYGQTDRQGQSSHYGQTDRQGQSSHYSQPDK 480
>LEG3_HUMAN (P17931) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)| (IgE-binding protein) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Laminin-binding protein) (Lectin L-29) (L-31) (Galactoside-binding protein) (GALBP) Length = 249 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -1 Query: 427 SGRASPAGWRGAFRPTGSTASGYS*GANDGALP-SP*PGAVP 305 SG +P GW GA+ + A GY + GA P PGA P Sbjct: 13 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYP 54
>CTTB2_CALJA (Q2QLF8) Cortactin-binding protein 2 (CortBP2)| Length = 1662 Score = 28.5 bits (62), Expect = 7.9 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = +1 Query: 178 EPTCSLA*LPTRITATASTTMG*HNNNSEAPTPLHTIRTQQAPAR-HP 318 +PT S+ LP+ + + T G NS+AP P+H++ + A A HP Sbjct: 392 DPTSSIPPLPSNAAPSTAQTPGITPQNSQAP-PMHSLHSPCANASLHP 438 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,960,947 Number of Sequences: 219361 Number of extensions: 1343484 Number of successful extensions: 4012 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3490 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4001 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)