Clone Name | rbart33e09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HIS7_BUCAP (Q9ZHE4) Histidine biosynthesis bifunctional protein ... | 28 | 6.5 | 2 | MSP1_PLAYO (P13828) Merozoite surface protein 1 precursor (Meroz... | 28 | 8.5 |
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>HIS7_BUCAP (Q9ZHE4) Histidine biosynthesis bifunctional protein hisB| [Includes: Histidinol-phosphatase (EC 3.1.3.15); Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (IGPD)] Length = 355 Score = 28.1 bits (61), Expect = 6.5 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +3 Query: 24 LLRKNRARETIRPTIKIYAHF-IPYDYPHKSIYSNLKTGIN 143 ++++NR RE IR T + Y H + D H +S ++TGIN Sbjct: 162 IIKRNRYREVIRETKETYIHIKLWLDLEH---HSCIQTGIN 199
>MSP1_PLAYO (P13828) Merozoite surface protein 1 precursor (Merozoite surface| antigens) (PMMSA) (230 kDa) (PY230) Length = 1772 Score = 27.7 bits (60), Expect = 8.5 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +3 Query: 30 RKNRARETIRPTIKIYAHFIPYDYPHKSIYSNL 128 +KN+A ETI P Y + I Y P +Y+ + Sbjct: 413 KKNKASETIIPLTIRYPNGISYPLPENDVYNKI 445 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,503,193 Number of Sequences: 219361 Number of extensions: 462080 Number of successful extensions: 776 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 774 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 776 length of database: 80,573,946 effective HSP length: 46 effective length of database: 70,483,340 effective search space used: 1691600160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)