Clone Name | rbart33e09 |
---|---|
Clone Library Name | barley_pub |
>gb|AC131269.3| Homo sapiens chromosome 8, clone RP11-416I21, complete sequence Length = 190031 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ctttattattaaggaaaaata 39 ||||||||||||||||||||| Sbjct: 98519 ctttattattaaggaaaaata 98539
>gb|AC130360.4| Homo sapiens chromosome 8, clone RP11-287P18, complete sequence Length = 171474 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ctttattattaaggaaaaata 39 ||||||||||||||||||||| Sbjct: 24611 ctttattattaaggaaaaata 24631
>gb|AF252831.2| Homo sapiens chromosome 8 clone SCb-177k12 map 8p22-p21, complete sequence Length = 115137 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ctttattattaaggaaaaata 39 ||||||||||||||||||||| Sbjct: 3404 ctttattattaaggaaaaata 3424
>gb|AC105214.6| Homo sapiens chromosome 8, clone RP11-354G4, complete sequence Length = 158209 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ctttattattaaggaaaaata 39 ||||||||||||||||||||| Sbjct: 117468 ctttattattaaggaaaaata 117488
>gb|AC026698.6| Homo sapiens chromosome 5 clone CTC-457H17, complete sequence Length = 192731 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 ttattaaggaaaaatagggca 44 ||||||||||||||||||||| Sbjct: 21407 ttattaaggaaaaatagggca 21427
>gb|AC005406.2| Homo sapiens clone b128f11, complete sequence Length = 226345 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ttattaaggaaaaatagggca 44 ||||||||||||||||||||| Sbjct: 171385 ttattaaggaaaaatagggca 171365
>gb|AC130366.5| Homo sapiens chromosome 8, clone RP11-1236K1, complete sequence Length = 178000 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ctttattattaaggaaaaata 39 ||||||||||||||||||||| Sbjct: 40990 ctttattattaaggaaaaata 41010
>gb|AC010598.6| Homo sapiens chromosome 5 clone CTC-560O9, complete sequence Length = 174551 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ttattaaggaaaaatagggca 44 ||||||||||||||||||||| Sbjct: 10840 ttattaaggaaaaatagggca 10820
>gb|AC130339.12| Homo sapiens chromosome 8, clone RP13-941O14, complete sequence Length = 173255 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ctttattattaaggaaaaata 39 ||||||||||||||||||||| Sbjct: 47754 ctttattattaaggaaaaata 47774
>gb|AC134683.9| Homo sapiens chromosome 8, clone RP11-1175L4, complete sequence Length = 172084 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ctttattattaaggaaaaata 39 ||||||||||||||||||||| Sbjct: 161360 ctttattattaaggaaaaata 161340
>gb|AC134395.7| Homo sapiens chromosome 8, clone RP11-739E3, complete sequence Length = 178401 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ctttattattaaggaaaaata 39 ||||||||||||||||||||| Sbjct: 158204 ctttattattaaggaaaaata 158184
>gb|AC130379.8| Homo sapiens chromosome 17, clone RP13-383M5, complete sequence Length = 195488 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ctttattattaaggaaaaata 39 ||||||||||||||||||||| Sbjct: 158553 ctttattattaaggaaaaata 158573
>gb|AC130365.5| Homo sapiens chromosome 8, clone RP11-1195F20, complete sequence Length = 171639 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ctttattattaaggaaaaata 39 ||||||||||||||||||||| Sbjct: 30219 ctttattattaaggaaaaata 30239
>gb|AC117621.7| Mus musculus chromosome 8, clone RP23-114B10, complete sequence Length = 214933 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 attaaggaaaaatagggcac 45 |||||||||||||||||||| Sbjct: 38768 attaaggaaaaatagggcac 38749
>emb|AL139818.15| Human DNA sequence from clone RP11-311B18 on chromosome 10 Contains a novel gene, complete sequence Length = 103124 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 attattaaggaaaaataggg 42 |||||||||||||||||||| Sbjct: 95828 attattaaggaaaaataggg 95809
>emb|AL138772.8| Human DNA sequence from clone RP4-576A20 on chromosome 10, complete sequence Length = 55835 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aacaattaaaatctatgctc 81 |||||||||||||||||||| Sbjct: 7066 aacaattaaaatctatgctc 7085
>gb|AC162797.6| Mus musculus chromosome 8, clone RP23-293E17, complete sequence Length = 142444 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 attaaggaaaaatagggcac 45 |||||||||||||||||||| Sbjct: 65886 attaaggaaaaatagggcac 65867
>gb|AC131956.1| Homo sapiens BAC clone RP11-793B23 from 4, complete sequence Length = 195404 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tttattattaaggaaaaata 39 |||||||||||||||||||| Sbjct: 167485 tttattattaaggaaaaata 167466
>emb|CR394554.6| Zebrafish DNA sequence from clone CH211-113B13 in linkage group 25, complete sequence Length = 168993 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ggaaaaatagggcacgggaaacaa 54 |||||||||||||| ||||||||| Sbjct: 161736 ggaaaaatagggcatgggaaacaa 161759
>emb|CR925816.4| Zebrafish DNA sequence from clone DKEY-87B19 in linkage group 10, complete sequence Length = 45684 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ggaaaaatagggcacgggaaacaa 54 |||||||||||||| ||||||||| Sbjct: 12828 ggaaaaatagggcatgggaaacaa 12851
>gb|AC171557.7| Mus musculus chromosome 7, clone RP24-62E17, complete sequence Length = 163762 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 taaatcaatttactcaaacctaaa 130 |||||||||||| ||||||||||| Sbjct: 91142 taaatcaatttagtcaaacctaaa 91119
>emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chromosome 1, complete sequence Length = 217775 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tttattattaaggaaaaata 39 |||||||||||||||||||| Sbjct: 137763 tttattattaaggaaaaata 137782 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,166,008 Number of Sequences: 3902068 Number of extensions: 2166008 Number of successful extensions: 150685 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 150613 Number of HSP's gapped (non-prelim): 72 length of query: 212 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 190 effective length of database: 17,147,199,772 effective search space: 3257967956680 effective search space used: 3257967956680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)