Clone Name | rbart33e01 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_188843.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1165 Score = 313 bits (158), Expect = 4e-82 Identities = 385/452 (85%), Gaps = 9/452 (1%) Strand = Plus / Plus Query: 120 gcggcccgcgccgccggcgctgccgtggtcggtgaggctccagctgttcgcgctcgtcac 179 |||||||| |||||||||| |||||||| ||||| |||||||||| ||||| |||||||| Sbjct: 60 gcggcccgagccgccggcgttgccgtggacggtgcggctccagctcttcgccctcgtcac 119 Query: 180 caccaacgacatcgcgcagcgccgcgacgggaccgtaaaccgcttcctcttctccttcgg 239 | || |||||||| ||||||| ||||||| ||||| |||||||||||||||||| ||| Sbjct: 120 cgccgtcgacatcgtgcagcgcggcgacggcaccgtcaaccgcttcctcttctccctcgc 179 Query: 240 cgaccggcag-tcgcccgcgaggcctcgcccggacgcgcacggcgtacgctccgccgacg 298 ||||| ||| |||| || || | ||||||||||| |||||||| ||||||| ||| | Sbjct: 180 agaccgccagagcgccgccgcgg-cgcgcccggacgcccacggcgtccgctccggcgatg 238 Query: 299 tcaccgtcgacgcctcccgaagcctctgggcgcgcgtctactcccctgcg-gcggcggcg 357 ||||||||||||| ||||| | || ||||||||||| | |||||| ||| || || || Sbjct: 239 tcaccgtcgacgcgtcccgcgggctgtgggcgcgcgtgttctcccccgcgagcagcagc- 297 Query: 358 gccgggcagaccccgc---tccccgtcctcgtctacttccacggcggcggcttcacgctg 414 |||| | | |||||| |||||||| |||||||||||||||||||||||||| |||| Sbjct: 298 gccgtggaatccccgccgctccccgtcgtcgtctacttccacggcggcggcttcgcgctc 357 Query: 415 ctctccgctgcctccacgcccat-cgacggcatgtgccgccgcttctgccgcgagctggg 473 ||| |||| ||||||| ||| | ||||| | |||||||||| ||||||||||||| | Sbjct: 358 ctcaccgccgcctcca-gccagtacgacgccttgtgccgccggctctgccgcgagctccg 416 Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgccta 533 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 417 cgccgtcgtcgtctccgtcaactaccgcctcgcccccgagcaccgctaccccgccgccta 476 Query: 534 cgacgactgcgtggacgtgctccgctacctcg 565 ||||||| ||||||||||||||||| |||||| Sbjct: 477 cgacgacggcgtggacgtgctccgccacctcg 508
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 313 bits (158), Expect = 4e-82 Identities = 385/452 (85%), Gaps = 9/452 (1%) Strand = Plus / Minus Query: 120 gcggcccgcgccgccggcgctgccgtggtcggtgaggctccagctgttcgcgctcgtcac 179 |||||||| |||||||||| |||||||| ||||| |||||||||| ||||| |||||||| Sbjct: 26738395 gcggcccgagccgccggcgttgccgtggacggtgcggctccagctcttcgccctcgtcac 26738336 Query: 180 caccaacgacatcgcgcagcgccgcgacgggaccgtaaaccgcttcctcttctccttcgg 239 | || |||||||| ||||||| ||||||| ||||| |||||||||||||||||| ||| Sbjct: 26738335 cgccgtcgacatcgtgcagcgcggcgacggcaccgtcaaccgcttcctcttctccctcgc 26738276 Query: 240 cgaccggcag-tcgcccgcgaggcctcgcccggacgcgcacggcgtacgctccgccgacg 298 ||||| ||| |||| || || | ||||||||||| |||||||| ||||||| ||| | Sbjct: 26738275 agaccgccagagcgccgccgcgg-cgcgcccggacgcccacggcgtccgctccggcgatg 26738217 Query: 299 tcaccgtcgacgcctcccgaagcctctgggcgcgcgtctactcccctgcg-gcggcggcg 357 ||||||||||||| ||||| | || ||||||||||| | |||||| ||| || || || Sbjct: 26738216 tcaccgtcgacgcgtcccgcgggctgtgggcgcgcgtgttctcccccgcgagcagcagc- 26738158 Query: 358 gccgggcagaccccgc---tccccgtcctcgtctacttccacggcggcggcttcacgctg 414 |||| | | |||||| |||||||| |||||||||||||||||||||||||| |||| Sbjct: 26738157 gccgtggaatccccgccgctccccgtcgtcgtctacttccacggcggcggcttcgcgctc 26738098 Query: 415 ctctccgctgcctccacgcccat-cgacggcatgtgccgccgcttctgccgcgagctggg 473 ||| |||| ||||||| ||| | ||||| | |||||||||| ||||||||||||| | Sbjct: 26738097 ctcaccgccgcctcca-gccagtacgacgccttgtgccgccggctctgccgcgagctccg 26738039 Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgccta 533 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 26738038 cgccgtcgtcgtctccgtcaactaccgcctcgcccccgagcaccgctaccccgccgccta 26737979 Query: 534 cgacgactgcgtggacgtgctccgctacctcg 565 ||||||| ||||||||||||||||| |||||| Sbjct: 26737978 cgacgacggcgtggacgtgctccgccacctcg 26737947 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Minus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcc 531 |||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 26743440 ggcgtcgtcgtcgtctccgtcaactaccgcctcgcgcccgagcaccgctaccccgccgcc 26743381 Query: 532 tacgacgactgcgtggacgtgctccgctacctcg 565 ||||||||| ||||||||| |||||||| ||||| Sbjct: 26743380 tacgacgacggcgtggacgcgctccgcttcctcg 26743347 Score = 109 bits (55), Expect = 1e-20 Identities = 162/195 (83%), Gaps = 2/195 (1%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctccac 431 |||||| ||| |||||||||||||||||||||||||| ||| ||||||| || || | Sbjct: 26730643 gctcccggtcgtcgtctacttccacggcggcggcttcgtgctcttctccgcggcgtcg-c 26730585 Query: 432 gcccat-cgacggcatgtgccgccgcttctgccgcgagctgggcgccgtggtcgtctccg 490 |||| | ||||| | ||||||||| ||| ||||| | | || |||||||| || |||| Sbjct: 26730584 gcccctacgacgcgctctgccgccgcatctcccgcggggtcggagccgtggtggtgtccg 26730525 Query: 491 tcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtggacg 550 | |||||||||||||| ||||||||||||| ||| ||||||||||||||| || | | || Sbjct: 26730524 tgaactaccgcctcgcccccgagcaccgcttccccgccgcctacgacgacggcctcgccg 26730465 Query: 551 tgctccgctacctcg 565 |||||||||||||| Sbjct: 26730464 cgctccgctacctcg 26730450 Score = 93.7 bits (47), Expect = 6e-16 Identities = 103/121 (85%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 448 tgccgccgcttctgccgcgagctgggcgccgtggtcgtctccgtcaactaccgcctcgc- 506 ||||||||| ||||||||||||| |||||||||| || |||||||||||||||||||| Sbjct: 26726845 tgccgccgcatctgccgcgagctccgcgccgtggtggtgtccgtcaactaccgcctcgcc 26726904 Query: 507 --gcccgagcaccgctacccggccgcctacgacgactgcgtggacgtgctccgctacctc 564 |||| || ||||| ||| ||||||||||||||| || | | || ||||||||||||| Sbjct: 26726905 ggccccgcgcgccgcttccccgccgcctacgacgacggcctcgccgcgctccgctacctc 26726964 Query: 565 g 565 | Sbjct: 26726965 g 26726965 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 370 ccgctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctcc 429 |||| ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 26740657 ccgcgccccgtcgtcgtctacttccacggcggcggcttcacgctgttctccgcggcctcc 26740598 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 473 gcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcct 532 ||||||| ||||| |||||| ||||||||||||| ||||||||||| || ||||| | Sbjct: 26740566 gcgccgtcgtcgtgtccgtcgactaccgcctcgcccccgagcaccgggctcccgccgcgt 26740507 Query: 533 acgacgactgcgtggacgtgctccgctacctcggcgaccccggcctccc 581 |||||||| | | || ||| |||||||||||||||| | |||||||||| Sbjct: 26740506 acgacgacggggaggccgtcctccgctacctcggcgccaccggcctccc 26740458 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 279 cggcgtacgctccgccgacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtcta 338 |||||| ||||||| |||||||||| |||||||||| || |||||||||||||||||| Sbjct: 26726673 cggcgtccgctccgtcgacgtcaccatcgacgcctcacgcggcctctgggcgcgcgtctt 26726732 Query: 339 ctcccc 344 |||||| Sbjct: 26726733 ctcccc 26726738 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 279 cggcgtacgctccgccgacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgt 335 |||||| ||||||| |||||||||| ||||||||||||| |||||||||||||||| Sbjct: 26730733 cggcgtccgctccgtcgacgtcaccatcgacgcctcccgcggcctctgggcgcgcgt 26730677 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 371 cgctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctcc 429 ||||||| ||| |||||| ||||||||||||||||||| ||| ||||||| |||||| Sbjct: 26726768 cgctcccggtcgtcgtcttcttccacggcggcggcttcgtgctcttctccgccgcctcc 26726826 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 465 cgagctgggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||||||||| |||||| | | ||||||||||||| |||||||||||| Sbjct: 3393208 cgagctgggcgccgtcgtcgtcgcgcccgactaccgcctcgctcccgagcaccgc 3393154 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 382 ctcgtctacttccacggcggcggcttc 408 ||||||||||||||||||||||||||| Sbjct: 3378427 ctcgtctacttccacggcggcggcttc 3378401 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 374 tccccgtcctcgtctacttccacggcggcggcttc 408 |||||||| ||| |||||||||||||||||||||| Sbjct: 3366001 tccccgtcgtcgcctacttccacggcggcggcttc 3365967 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||| ||| ||||||||||||||||||| | | |||||| ||||||||||| Sbjct: 24878685 tccgtcgacttccgcctcgcgcccgagcacggtttcccggcgccctacgacgac 24878738 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 3375332 cgccgtggtgctctccttcgactaccgcctcgcgccggagcaccgc 3375287 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||| |||||| | |||||||||||||||||||||| Sbjct: 20546274 gtcgtgtccgtcgagtaccgcctcgcgcccgagcacc 20546238 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Minus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacga 536 |||||| | ||||||||||||| |||||||||||| ||| ||||| ||||| Sbjct: 3378324 tctccgccgactaccgcctcgcccccgagcaccgcctccccgccgcgtacga 3378273 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 ||||| || |||||||||||||||| |||||| || ||| |||||||||| Sbjct: 28640452 tctccctcgactaccgcctcgcgcctgagcactgcctccccgccgcctacg 28640402 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 382 ctcgtctacttccacggcggcgg 404 ||||||||||||||||||||||| Sbjct: 3384482 ctcgtctacttccacggcggcgg 3384460 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 199 cgccgcgacgggaccgtaaaccgcttcctc 228 ||||||||||| ||||| |||||||||||| Sbjct: 24878397 cgccgcgacggcaccgtcaaccgcttcctc 24878426 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 |||||| ||| | ||||||||||||||||| |||||| Sbjct: 28640565 gctccctgtcattgtctacttccacggcggtggcttc 28640529 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 194 cgcagcgccgcgacgggaccgtaaaccgcttcctcttctcc 234 |||||||||| ||||| | ||| ||||| |||||||||||| Sbjct: 26740821 cgcagcgccgagacggcagcgtcaaccgtttcctcttctcc 26740781 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 tcaccgtcgacgcctcccgaagcctctgggcgcgcgt 335 ||||||||||||| || || |||||||||||||||| Sbjct: 26740716 tcaccgtcgacgcttcgcgcggcctctgggcgcgcgt 26740680 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 tacttccacggcggcggcttc 408 ||||||||||||||||||||| Sbjct: 24878586 tacttccacggcggcggcttc 24878606 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cccgtcctcgtctacttccacggcggcggcttc 408 |||||| |||| ||||||||||||||| ||||| Sbjct: 20546379 cccgtcgtcgtgtacttccacggcggctgcttc 20546347 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||| |||||| | |||||||||||||| ||||||| Sbjct: 20470559 gtcgtgtccgtcgagtaccgcctcgcgccggagcacc 20470595 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||||||||| | |||||||||||||| ||||||| Sbjct: 18840250 gtcgtctccgtggagtaccgcctcgcgccggagcacc 18840286 Score = 40.1 bits (20), Expect = 8.3 Identities = 53/64 (82%) Strand = Plus / Minus Query: 294 cgacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtctactcccctgcggcggc 353 |||| ||||| |||||||| | || |||||||||||||||| | | | || |||||||| Sbjct: 26743618 cgacttcaccatcgacgccgcgcgcggcctctgggcgcgcgtgttcgcgcccgcggcggc 26743559 Query: 354 ggcg 357 |||| Sbjct: 26743558 ggcg 26743555 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 catcgacggcatgtgccgcc 454 |||||||||||||||||||| Sbjct: 21704773 catcgacggcatgtgccgcc 21704754 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagca 515 |||||| | ||||| |||||| | |||||||||||||| ||||| Sbjct: 20431814 ggcgccctcgtcgtgtccgtcgagtaccgcctcgcgccggagca 20431857 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagca 515 |||||| | ||||| |||||| | |||||||||||||| ||||| Sbjct: 20395767 ggcgccctcgtcgtgtccgtcgagtaccgcctcgcgccagagca 20395810 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 496 taccgcctcgcgcccgagcaccgc 519 ||||||||||| |||||||||||| Sbjct: 3384368 taccgcctcgcccccgagcaccgc 3384345
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 313 bits (158), Expect = 4e-82 Identities = 385/452 (85%), Gaps = 9/452 (1%) Strand = Plus / Minus Query: 120 gcggcccgcgccgccggcgctgccgtggtcggtgaggctccagctgttcgcgctcgtcac 179 |||||||| |||||||||| |||||||| ||||| |||||||||| ||||| |||||||| Sbjct: 85252 gcggcccgagccgccggcgttgccgtggacggtgcggctccagctcttcgccctcgtcac 85193 Query: 180 caccaacgacatcgcgcagcgccgcgacgggaccgtaaaccgcttcctcttctccttcgg 239 | || |||||||| ||||||| ||||||| ||||| |||||||||||||||||| ||| Sbjct: 85192 cgccgtcgacatcgtgcagcgcggcgacggcaccgtcaaccgcttcctcttctccctcgc 85133 Query: 240 cgaccggcag-tcgcccgcgaggcctcgcccggacgcgcacggcgtacgctccgccgacg 298 ||||| ||| |||| || || | ||||||||||| |||||||| ||||||| ||| | Sbjct: 85132 agaccgccagagcgccgccgcgg-cgcgcccggacgcccacggcgtccgctccggcgatg 85074 Query: 299 tcaccgtcgacgcctcccgaagcctctgggcgcgcgtctactcccctgcg-gcggcggcg 357 ||||||||||||| ||||| | || ||||||||||| | |||||| ||| || || || Sbjct: 85073 tcaccgtcgacgcgtcccgcgggctgtgggcgcgcgtgttctcccccgcgagcagcagc- 85015 Query: 358 gccgggcagaccccgc---tccccgtcctcgtctacttccacggcggcggcttcacgctg 414 |||| | | |||||| |||||||| |||||||||||||||||||||||||| |||| Sbjct: 85014 gccgtggaatccccgccgctccccgtcgtcgtctacttccacggcggcggcttcgcgctc 84955 Query: 415 ctctccgctgcctccacgcccat-cgacggcatgtgccgccgcttctgccgcgagctggg 473 ||| |||| ||||||| ||| | ||||| | |||||||||| ||||||||||||| | Sbjct: 84954 ctcaccgccgcctcca-gccagtacgacgccttgtgccgccggctctgccgcgagctccg 84896 Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgccta 533 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 84895 cgccgtcgtcgtctccgtcaactaccgcctcgcccccgagcaccgctaccccgccgccta 84836 Query: 534 cgacgactgcgtggacgtgctccgctacctcg 565 ||||||| ||||||||||||||||| |||||| Sbjct: 84835 cgacgacggcgtggacgtgctccgccacctcg 84804 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Minus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcc 531 |||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 90297 ggcgtcgtcgtcgtctccgtcaactaccgcctcgcgcccgagcaccgctaccccgccgcc 90238 Query: 532 tacgacgactgcgtggacgtgctccgctacctcg 565 ||||||||| ||||||||| |||||||| ||||| Sbjct: 90237 tacgacgacggcgtggacgcgctccgcttcctcg 90204 Score = 109 bits (55), Expect = 1e-20 Identities = 162/195 (83%), Gaps = 2/195 (1%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctccac 431 |||||| ||| |||||||||||||||||||||||||| ||| ||||||| || || | Sbjct: 77500 gctcccggtcgtcgtctacttccacggcggcggcttcgtgctcttctccgcggcgtcg-c 77442 Query: 432 gcccat-cgacggcatgtgccgccgcttctgccgcgagctgggcgccgtggtcgtctccg 490 |||| | ||||| | ||||||||| ||| ||||| | | || |||||||| || |||| Sbjct: 77441 gcccctacgacgcgctctgccgccgcatctcccgcggggtcggagccgtggtggtgtccg 77382 Query: 491 tcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtggacg 550 | |||||||||||||| ||||||||||||| ||| ||||||||||||||| || | | || Sbjct: 77381 tgaactaccgcctcgcccccgagcaccgcttccccgccgcctacgacgacggcctcgccg 77322 Query: 551 tgctccgctacctcg 565 |||||||||||||| Sbjct: 77321 cgctccgctacctcg 77307 Score = 93.7 bits (47), Expect = 6e-16 Identities = 103/121 (85%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 448 tgccgccgcttctgccgcgagctgggcgccgtggtcgtctccgtcaactaccgcctcgc- 506 ||||||||| ||||||||||||| |||||||||| || |||||||||||||||||||| Sbjct: 73702 tgccgccgcatctgccgcgagctccgcgccgtggtggtgtccgtcaactaccgcctcgcc 73761 Query: 507 --gcccgagcaccgctacccggccgcctacgacgactgcgtggacgtgctccgctacctc 564 |||| || ||||| ||| ||||||||||||||| || | | || ||||||||||||| Sbjct: 73762 ggccccgcgcgccgcttccccgccgcctacgacgacggcctcgccgcgctccgctacctc 73821 Query: 565 g 565 | Sbjct: 73822 g 73822 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 370 ccgctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctcc 429 |||| ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 87514 ccgcgccccgtcgtcgtctacttccacggcggcggcttcacgctgttctccgcggcctcc 87455 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 473 gcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcct 532 ||||||| ||||| |||||| ||||||||||||| ||||||||||| || ||||| | Sbjct: 87423 gcgccgtcgtcgtgtccgtcgactaccgcctcgcccccgagcaccgggctcccgccgcgt 87364 Query: 533 acgacgactgcgtggacgtgctccgctacctcggcgaccccggcctccc 581 |||||||| | | || ||| |||||||||||||||| | |||||||||| Sbjct: 87363 acgacgacggggaggccgtcctccgctacctcggcgccaccggcctccc 87315 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 279 cggcgtacgctccgccgacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtcta 338 |||||| ||||||| |||||||||| |||||||||| || |||||||||||||||||| Sbjct: 73530 cggcgtccgctccgtcgacgtcaccatcgacgcctcacgcggcctctgggcgcgcgtctt 73589 Query: 339 ctcccc 344 |||||| Sbjct: 73590 ctcccc 73595 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 279 cggcgtacgctccgccgacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgt 335 |||||| ||||||| |||||||||| ||||||||||||| |||||||||||||||| Sbjct: 77590 cggcgtccgctccgtcgacgtcaccatcgacgcctcccgcggcctctgggcgcgcgt 77534 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 371 cgctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctcc 429 ||||||| ||| |||||| ||||||||||||||||||| ||| ||||||| |||||| Sbjct: 73625 cgctcccggtcgtcgtcttcttccacggcggcggcttcgtgctcttctccgccgcctcc 73683 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 194 cgcagcgccgcgacgggaccgtaaaccgcttcctcttctcc 234 |||||||||| ||||| | ||| ||||| |||||||||||| Sbjct: 87678 cgcagcgccgagacggcagcgtcaaccgtttcctcttctcc 87638 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 tcaccgtcgacgcctcccgaagcctctgggcgcgcgt 335 ||||||||||||| || || |||||||||||||||| Sbjct: 87573 tcaccgtcgacgcttcgcgcggcctctgggcgcgcgt 87537 Score = 40.1 bits (20), Expect = 8.3 Identities = 53/64 (82%) Strand = Plus / Minus Query: 294 cgacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtctactcccctgcggcggc 353 |||| ||||| |||||||| | || |||||||||||||||| | | | || |||||||| Sbjct: 90475 cgacttcaccatcgacgccgcgcgcggcctctgggcgcgcgtgttcgcgcccgcggcggc 90416 Query: 354 ggcg 357 |||| Sbjct: 90415 ggcg 90412
>dbj|AK109437.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-B02, full insert sequence Length = 1171 Score = 313 bits (158), Expect = 4e-82 Identities = 385/452 (85%), Gaps = 9/452 (1%) Strand = Plus / Plus Query: 120 gcggcccgcgccgccggcgctgccgtggtcggtgaggctccagctgttcgcgctcgtcac 179 |||||||| |||||||||| |||||||| ||||| |||||||||| ||||| |||||||| Sbjct: 66 gcggcccgagccgccggcgttgccgtggacggtgcggctccagctcttcgccctcgtcac 125 Query: 180 caccaacgacatcgcgcagcgccgcgacgggaccgtaaaccgcttcctcttctccttcgg 239 | || |||||||| ||||||| ||||||| ||||| |||||||||||||||||| ||| Sbjct: 126 cgccgtcgacatcgtgcagcgcggcgacggcaccgtcaaccgcttcctcttctccctcgc 185 Query: 240 cgaccggcag-tcgcccgcgaggcctcgcccggacgcgcacggcgtacgctccgccgacg 298 ||||| ||| |||| || || | ||||||||||| |||||||| ||||||| ||| | Sbjct: 186 agaccgccagagcgccgccgcgg-cgcgcccggacgcccacggcgtccgctccggcgatg 244 Query: 299 tcaccgtcgacgcctcccgaagcctctgggcgcgcgtctactcccctgcg-gcggcggcg 357 ||||||||||||| ||||| | || ||||||||||| | |||||| ||| || || || Sbjct: 245 tcaccgtcgacgcgtcccgcgggctgtgggcgcgcgtgttctcccccgcgagcagcagc- 303 Query: 358 gccgggcagaccccgc---tccccgtcctcgtctacttccacggcggcggcttcacgctg 414 |||| | | |||||| |||||||| |||||||||||||||||||||||||| |||| Sbjct: 304 gccgtggaatccccgccgctccccgtcgtcgtctacttccacggcggcggcttcgcgctc 363 Query: 415 ctctccgctgcctccacgcccat-cgacggcatgtgccgccgcttctgccgcgagctggg 473 ||| |||| ||||||| ||| | ||||| | |||||||||| ||||||||||||| | Sbjct: 364 ctcaccgccgcctcca-gccagtacgacgccttgtgccgccggctctgccgcgagctccg 422 Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgccta 533 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 423 cgccgtcgtcgtctccgtcaactaccgcctcgcccccgagcaccgctaccccgccgccta 482 Query: 534 cgacgactgcgtggacgtgctccgctacctcg 565 ||||||| ||||||||||||||||| |||||| Sbjct: 483 cgacgacggcgtggacgtgctccgccacctcg 514
>dbj|AK111373.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-A08, full insert sequence Length = 1139 Score = 313 bits (158), Expect = 4e-82 Identities = 385/452 (85%), Gaps = 9/452 (1%) Strand = Plus / Minus Query: 120 gcggcccgcgccgccggcgctgccgtggtcggtgaggctccagctgttcgcgctcgtcac 179 |||||||| |||||||||| |||||||| ||||| |||||||||| ||||| |||||||| Sbjct: 1000 gcggcccgagccgccggcgttgccgtggacggtgcggctccagctcttcgccctcgtcac 941 Query: 180 caccaacgacatcgcgcagcgccgcgacgggaccgtaaaccgcttcctcttctccttcgg 239 | || |||||||| ||||||| ||||||| ||||| |||||||||||||||||| ||| Sbjct: 940 cgccgtcgacatcgtgcagcgcggcgacggcaccgtcaaccgcttcctcttctccctcgc 881 Query: 240 cgaccggcag-tcgcccgcgaggcctcgcccggacgcgcacggcgtacgctccgccgacg 298 ||||| ||| |||| || || | ||||||||||| |||||||| ||||||| ||| | Sbjct: 880 agaccgccagagcgccgccgcgg-cgcgcccggacgcccacggcgtccgctccggcgatg 822 Query: 299 tcaccgtcgacgcctcccgaagcctctgggcgcgcgtctactcccctgcg-gcggcggcg 357 ||||||||||||| ||||| | || ||||||||||| | |||||| ||| || || || Sbjct: 821 tcaccgtcgacgcgtcccgcgggctgtgggcgcgcgtgttctcccccgcgagcagcagc- 763 Query: 358 gccgggcagaccccgc---tccccgtcctcgtctacttccacggcggcggcttcacgctg 414 |||| | | |||||| |||||||| |||||||||||||||||||||||||| |||| Sbjct: 762 gccgtggaatccccgccgctccccgtcgtcgtctacttccacggcggcggcttcgcgctc 703 Query: 415 ctctccgctgcctccacgcccat-cgacggcatgtgccgccgcttctgccgcgagctggg 473 ||| |||| ||||||| ||| | ||||| | |||||||||| ||||||||||||| | Sbjct: 702 ctcaccgccgcctcca-gccagtacgacgccttgtgccgccggctctgccgcgagctccg 644 Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgccta 533 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 643 cgccgtcgtcgtctccgtcaactaccgcctcgcccccgagcaccgctaccccgccgccta 584 Query: 534 cgacgactgcgtggacgtgctccgctacctcg 565 ||||||| ||||||||||||||||| |||||| Sbjct: 583 cgacgacggcgtggacgtgctccgccacctcg 552
>dbj|AK061012.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B04, full insert sequence Length = 1165 Score = 313 bits (158), Expect = 4e-82 Identities = 385/452 (85%), Gaps = 9/452 (1%) Strand = Plus / Plus Query: 120 gcggcccgcgccgccggcgctgccgtggtcggtgaggctccagctgttcgcgctcgtcac 179 |||||||| |||||||||| |||||||| ||||| |||||||||| ||||| |||||||| Sbjct: 60 gcggcccgagccgccggcgttgccgtggacggtgcggctccagctcttcgccctcgtcac 119 Query: 180 caccaacgacatcgcgcagcgccgcgacgggaccgtaaaccgcttcctcttctccttcgg 239 | || |||||||| ||||||| ||||||| ||||| |||||||||||||||||| ||| Sbjct: 120 cgccgtcgacatcgtgcagcgcggcgacggcaccgtcaaccgcttcctcttctccctcgc 179 Query: 240 cgaccggcag-tcgcccgcgaggcctcgcccggacgcgcacggcgtacgctccgccgacg 298 ||||| ||| |||| || || | ||||||||||| |||||||| ||||||| ||| | Sbjct: 180 agaccgccagagcgccgccgcgg-cgcgcccggacgcccacggcgtccgctccggcgatg 238 Query: 299 tcaccgtcgacgcctcccgaagcctctgggcgcgcgtctactcccctgcg-gcggcggcg 357 ||||||||||||| ||||| | || ||||||||||| | |||||| ||| || || || Sbjct: 239 tcaccgtcgacgcgtcccgcgggctgtgggcgcgcgtgttctcccccgcgagcagcagc- 297 Query: 358 gccgggcagaccccgc---tccccgtcctcgtctacttccacggcggcggcttcacgctg 414 |||| | | |||||| |||||||| |||||||||||||||||||||||||| |||| Sbjct: 298 gccgtggaatccccgccgctccccgtcgtcgtctacttccacggcggcggcttcgcgctc 357 Query: 415 ctctccgctgcctccacgcccat-cgacggcatgtgccgccgcttctgccgcgagctggg 473 ||| |||| ||||||| ||| | ||||| | |||||||||| ||||||||||||| | Sbjct: 358 ctcaccgccgcctcca-gccagtacgacgccttgtgccgccggctctgccgcgagctccg 416 Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgccta 533 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 417 cgccgtcgtcgtctccgtcaactaccgcctcgcccccgagcaccgctaccccgccgccta 476 Query: 534 cgacgactgcgtggacgtgctccgctacctcg 565 ||||||| ||||||||||||||||| |||||| Sbjct: 477 cgacgacggcgtggacgtgctccgccacctcg 508
>ref|XM_479314.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1320 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcc 531 |||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 493 ggcgtcgtcgtcgtctccgtcaactaccgcctcgcgcccgagcaccgctaccccgccgcc 552 Query: 532 tacgacgactgcgtggacgtgctccgctacctcg 565 ||||||||| ||||||||| |||||||| ||||| Sbjct: 553 tacgacgacggcgtggacgcgctccgcttcctcg 586 Score = 40.1 bits (20), Expect = 8.3 Identities = 53/64 (82%) Strand = Plus / Plus Query: 294 cgacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtctactcccctgcggcggc 353 |||| ||||| |||||||| | || |||||||||||||||| | | | || |||||||| Sbjct: 315 cgacttcaccatcgacgccgcgcgcggcctctgggcgcgcgtgttcgcgcccgcggcggc 374 Query: 354 ggcg 357 |||| Sbjct: 375 ggcg 378
>dbj|AK109637.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E04, full insert sequence Length = 1320 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcc 531 |||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 493 ggcgtcgtcgtcgtctccgtcaactaccgcctcgcgcccgagcaccgctaccccgccgcc 552 Query: 532 tacgacgactgcgtggacgtgctccgctacctcg 565 ||||||||| ||||||||| |||||||| ||||| Sbjct: 553 tacgacgacggcgtggacgcgctccgcttcctcg 586 Score = 40.1 bits (20), Expect = 8.3 Identities = 53/64 (82%) Strand = Plus / Plus Query: 294 cgacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtctactcccctgcggcggc 353 |||| ||||| |||||||| | || |||||||||||||||| | | | || |||||||| Sbjct: 315 cgacttcaccatcgacgccgcgcgcggcctctgggcgcgcgtgttcgcgcccgcggcggc 374 Query: 354 ggcg 357 |||| Sbjct: 375 ggcg 378
>ref|NM_188838.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1684 Score = 109 bits (55), Expect = 1e-20 Identities = 162/195 (83%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctccac 431 |||||| ||| |||||||||||||||||||||||||| ||| ||||||| || || | Sbjct: 341 gctcccggtcgtcgtctacttccacggcggcggcttcgtgctcttctccgcggcgtcg-c 399 Query: 432 gcccat-cgacggcatgtgccgccgcttctgccgcgagctgggcgccgtggtcgtctccg 490 |||| | ||||| | ||||||||| ||| ||||| | | || |||||||| || |||| Sbjct: 400 gcccctacgacgcgctctgccgccgcatctcccgcggggtcggagccgtggtggtgtccg 459 Query: 491 tcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtggacg 550 | |||||||||||||| ||||||||||||| ||| ||||||||||||||| || | | || Sbjct: 460 tgaactaccgcctcgcccccgagcaccgcttccccgccgcctacgacgacggcctcgccg 519 Query: 551 tgctccgctacctcg 565 |||||||||||||| Sbjct: 520 cgctccgctacctcg 534 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 279 cggcgtacgctccgccgacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgt 335 |||||| ||||||| |||||||||| ||||||||||||| |||||||||||||||| Sbjct: 251 cggcgtccgctccgtcgacgtcaccatcgacgcctcccgcggcctctgggcgcgcgt 307
>dbj|AK109004.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-H02, full insert sequence Length = 1684 Score = 109 bits (55), Expect = 1e-20 Identities = 162/195 (83%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctccac 431 |||||| ||| |||||||||||||||||||||||||| ||| ||||||| || || | Sbjct: 341 gctcccggtcgtcgtctacttccacggcggcggcttcgtgctcttctccgcggcgtcg-c 399 Query: 432 gcccat-cgacggcatgtgccgccgcttctgccgcgagctgggcgccgtggtcgtctccg 490 |||| | ||||| | ||||||||| ||| ||||| | | || |||||||| || |||| Sbjct: 400 gcccctacgacgcgctctgccgccgcatctcccgcggggtcggagccgtggtggtgtccg 459 Query: 491 tcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtggacg 550 | |||||||||||||| ||||||||||||| ||| ||||||||||||||| || | | || Sbjct: 460 tgaactaccgcctcgcccccgagcaccgcttccccgccgcctacgacgacggcctcgccg 519 Query: 551 tgctccgctacctcg 565 |||||||||||||| Sbjct: 520 cgctccgctacctcg 534 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 279 cggcgtacgctccgccgacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgt 335 |||||| ||||||| |||||||||| ||||||||||||| |||||||||||||||| Sbjct: 251 cggcgtccgctccgtcgacgtcaccatcgacgcctcccgcggcctctgggcgcgcgt 307
>ref|XM_479313.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1044 Score = 93.7 bits (47), Expect = 6e-16 Identities = 103/121 (85%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 448 tgccgccgcttctgccgcgagctgggcgccgtggtcgtctccgtcaactaccgcctcgc- 506 ||||||||| ||||||||||||| |||||||||| || |||||||||||||||||||| Sbjct: 337 tgccgccgcatctgccgcgagctccgcgccgtggtggtgtccgtcaactaccgcctcgcc 396 Query: 507 --gcccgagcaccgctacccggccgcctacgacgactgcgtggacgtgctccgctacctc 564 |||| || ||||| ||| ||||||||||||||| || | | || ||||||||||||| Sbjct: 397 ggccccgcgcgccgcttccccgccgcctacgacgacggcctcgccgcgctccgctacctc 456 Query: 565 g 565 | Sbjct: 457 g 457 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 279 cggcgtacgctccgccgacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtcta 338 |||||| ||||||| |||||||||| |||||||||| || |||||||||||||||||| Sbjct: 165 cggcgtccgctccgtcgacgtcaccatcgacgcctcacgcggcctctgggcgcgcgtctt 224 Query: 339 ctcccc 344 |||||| Sbjct: 225 ctcccc 230 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 371 cgctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctcc 429 ||||||| ||| |||||| ||||||||||||||||||| ||| ||||||| |||||| Sbjct: 260 cgctcccggtcgtcgtcttcttccacggcggcggcttcgtgctcttctccgccgcctcc 318
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 93.7 bits (47), Expect = 6e-16 Identities = 103/121 (85%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 448 tgccgccgcttctgccgcgagctgggcgccgtggtcgtctccgtcaactaccgcctcgc- 506 ||||||||| ||||||||||||| |||||||||| || |||||||||||||||||||| Sbjct: 144449 tgccgccgcatctgccgcgagctccgcgccgtggtggtgtccgtcaactaccgcctcgcc 144508 Query: 507 --gcccgagcaccgctacccggccgcctacgacgactgcgtggacgtgctccgctacctc 564 |||| || ||||| ||| ||||||||||||||| || | | || ||||||||||||| Sbjct: 144509 ggccccgcgcgccgcttccccgccgcctacgacgacggcctcgccgcgctccgctacctc 144568 Query: 565 g 565 | Sbjct: 144569 g 144569 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 279 cggcgtacgctccgccgacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtcta 338 |||||| ||||||| |||||||||| |||||||||| || |||||||||||||||||| Sbjct: 144277 cggcgtccgctccgtcgacgtcaccatcgacgcctcacgcggcctctgggcgcgcgtctt 144336 Query: 339 ctcccc 344 |||||| Sbjct: 144337 ctcccc 144342 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 371 cgctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctcc 429 ||||||| ||| |||||| ||||||||||||||||||| ||| ||||||| |||||| Sbjct: 144372 cgctcccggtcgtcgtcttcttccacggcggcggcttcgtgctcttctccgccgcctcc 144430
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcc 531 |||||||| |||||||||||| ||||||||||||| ||||||||||| | ||| ||||| Sbjct: 11429581 ggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagcaccggttccccgccgcg 11429640 Query: 532 tacgacgactgcgtggacgtgctccgctacctcg 565 ||||||||| | | || ||| ||||||||||||| Sbjct: 11429641 tacgacgacggggaggccgtcctccgctacctcg 11429674 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 370 ccgctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctcc 429 |||| ||||||| |||||||||||||||||||||||||| || || |||| || |||||| Sbjct: 11429479 ccgcgccccgtcatcgtctacttccacggcggcggcttcgcgatgttctcggcggcctcc 11429538 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 295 gacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtct 337 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 11429383 gacgtcaccgtcgacgcgtcccgcggcctctgggcgcgcgtct 11429425 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 380 tcctcgtctacttccacggcggcggcttca 409 ||||||| |||||||||||||||||||||| Sbjct: 5824596 tcctcgtgtacttccacggcggcggcttca 5824625 Score = 48.1 bits (24), Expect = 0.034 Identities = 50/56 (89%), Gaps = 2/56 (3%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgact 541 |||||| | |||||||||||||||||||| ||||| ||| ||||| |||||||||| Sbjct: 5824703 tccgtcgagtaccgcctcgcgcccgagcacccgct-ccccgccgcgtacgacgact 5824757 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 171 gctcgtcaccaccaacgacatc 192 |||||||||||||||||||||| Sbjct: 20322719 gctcgtcaccaccaacgacatc 20322698 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 488 ccgtcaactaccgcctcgcgcccgagcacc 517 |||||||||||||||| ||||| ||||||| Sbjct: 6749976 ccgtcaactaccgcctagcgccagagcacc 6750005 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ctcccctgcggcggcggcgg 358 |||||||||||||||||||| Sbjct: 5056256 ctcccctgcggcggcggcgg 5056275
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcc 531 |||||||| |||||||||||| ||||||||||||| ||||||||||| | ||| ||||| Sbjct: 117290 ggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagcaccggttccccgccgcg 117349 Query: 532 tacgacgactgcgtggacgtgctccgctacctcg 565 ||||||||| | | || ||| ||||||||||||| Sbjct: 117350 tacgacgacggggaggccgtcctccgctacctcg 117383 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 370 ccgctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctcc 429 |||| ||||||| |||||||||||||||||||||||||| || || |||| || |||||| Sbjct: 117188 ccgcgccccgtcatcgtctacttccacggcggcggcttcgcgatgttctcggcggcctcc 117247 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 295 gacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtct 337 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 117092 gacgtcaccgtcgacgcgtcccgcggcctctgggcgcgcgtct 117134
>dbj|AK106075.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H11, full insert sequence Length = 1312 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcc 531 |||||||| |||||||||||| ||||||||||||| ||||||||||| | ||| ||||| Sbjct: 446 ggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagcaccggttccccgccgcg 505 Query: 532 tacgacgactgcgtggacgtgctccgctacctcg 565 ||||||||| | | || ||| ||||||||||||| Sbjct: 506 tacgacgacggggaggccgtcctccgctacctcg 539 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 370 ccgctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctcc 429 |||| ||||||| |||||||||||||||||||||||||| || || |||| || |||||| Sbjct: 344 ccgcgccccgtcatcgtctacttccacggcggcggcttcgcgatgttctcggcggcctcc 403 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 295 gacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtct 337 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 248 gacgtcaccgtcgacgcgtcccgcggcctctgggcgcgcgtct 290
>dbj|AK099262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004G05, full insert sequence Length = 1371 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcc 531 |||||||| |||||||||||| ||||||||||||| ||||||||||| | ||| ||||| Sbjct: 458 ggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagcaccggttccccgccgcg 517 Query: 532 tacgacgactgcgtggacgtgctccgctacctcg 565 ||||||||| | | || ||| ||||||||||||| Sbjct: 518 tacgacgacggggaggccgtcctccgctacctcg 551 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 370 ccgctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctcc 429 |||| ||||||| |||||||||||||||||||||||||| || || |||| || |||||| Sbjct: 356 ccgcgccccgtcatcgtctacttccacggcggcggcttcgcgatgttctcggcggcctcc 415 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 295 gacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtct 337 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 260 gacgtcaccgtcgacgcgtcccgcggcctctgggcgcgcgtct 302
>dbj|AK070763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066M03, full insert sequence Length = 1378 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcc 531 |||||||| |||||||||||| ||||||||||||| ||||||||||| | ||| ||||| Sbjct: 483 ggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagcaccggttccccgccgcg 542 Query: 532 tacgacgactgcgtggacgtgctccgctacctcg 565 ||||||||| | | || ||| ||||||||||||| Sbjct: 543 tacgacgacggggaggccgtcctccgctacctcg 576 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 370 ccgctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctcc 429 |||| ||||||| |||||||||||||||||||||||||| || || |||| || |||||| Sbjct: 381 ccgcgccccgtcatcgtctacttccacggcggcggcttcgcgatgttctcggcggcctcc 440 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 295 gacgtcaccgtcgacgcctcccgaagcctctgggcgcgcgtct 337 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 285 gacgtcaccgtcgacgcgtcccgcggcctctgggcgcgcgtct 327
>ref|NM_188844.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1041 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 370 ccgctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgctgcctcc 429 |||| ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 256 ccgcgccccgtcgtcgtctacttccacggcggcggcttcacgctgttctccgcggcctcc 315 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 473 gcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcct 532 ||||||| ||||| |||||| ||||||||||||| ||||||||||| || ||||| | Sbjct: 347 gcgccgtcgtcgtgtccgtcgactaccgcctcgcccccgagcaccgggctcccgccgcgt 406 Query: 533 acgacgactgcgtggacgtgctccgctacctcggcgaccccggcctccc 581 |||||||| | | || ||| |||||||||||||||| | |||||||||| Sbjct: 407 acgacgacggggaggccgtcctccgctacctcggcgccaccggcctccc 455 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 299 tcaccgtcgacgcctcccgaagcctctgggcgcgcgt 335 ||||||||||||| || || |||||||||||||||| Sbjct: 197 tcaccgtcgacgcttcgcgcggcctctgggcgcgcgt 233 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 194 cgcagcgccgcgacgggaccgtaaaccgcttcctcttctcc 234 |||||||||| ||||| | ||| ||||| |||||||||||| Sbjct: 92 cgcagcgccgagacggcagcgtcaaccgtttcctcttctcc 132
>ref|XM_483651.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1296 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 ||||||||| || |||||||||| ||||||||||||||| ||| ||||||||||||||| Sbjct: 390 gtcgtctccctcgactaccgccttgcgcccgagcaccgcctccccgccgcctacgacgac 449 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 |||||||||| || ||||||||||||||||||||||| Sbjct: 281 gctccccgtcatcctctacttccacggcggcggcttc 317
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 ||||||||| || |||||||||| ||||||||||||||| ||| ||||||||||||||| Sbjct: 27467411 gtcgtctccctcgactaccgccttgcgcccgagcaccgcctccccgccgcctacgacgac 27467352 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 |||||||||| || ||||||||||||||||||||||| Sbjct: 27467520 gctccccgtcatcctctacttccacggcggcggcttc 27467484 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 |||||||||| |||| ||||||||||||||||||||| Sbjct: 23402167 gctccccgtcgtcgtgtacttccacggcggcggcttc 23402131 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 |||||||||||| | |||||||||||||| ||||||| | |||||| ||||||| Sbjct: 23411930 gtcgtctccgtcgagtaccgcctcgcgccggagcaccccgtcccggcggcctacg 23411984 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcacc 517 |||||| |||||||||||||||||||||||| Sbjct: 23410262 tccgtcgactaccgcctcgcgcccgagcacc 23410292 Score = 54.0 bits (27), Expect = 6e-04 Identities = 50/55 (90%), Gaps = 2/55 (3%) Strand = Plus / Minus Query: 487 tccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgac 540 |||||| |||||||||||||||| ||||| ||||| ||| ||||||||||||||| Sbjct: 23402052 tccgtcgactaccgcctcgcgccggagcacccgct-ccccgccgcctacgacgac 23401999 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcgg 404 ||||||||| |||||||||| |||||||||||| Sbjct: 23411821 gctccccgtgctcgtctactaccacggcggcgg 23411853 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcg 403 |||||| || ||| |||||||||||||||||| Sbjct: 23405306 gctcccggtgctcatctacttccacggcggcg 23405275 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cccgcgccgccggcgctgcc 143 |||||||||||||||||||| Sbjct: 14013126 cccgcgccgccggcgctgcc 14013107
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0544G09 Length = 137481 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 ||||||||| || |||||||||| ||||||||||||||| ||| ||||||||||||||| Sbjct: 94206 gtcgtctccctcgactaccgccttgcgcccgagcaccgcctccccgccgcctacgacgac 94147 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 |||||||||| || ||||||||||||||||||||||| Sbjct: 94315 gctccccgtcatcctctacttccacggcggcggcttc 94279
>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_E06 Length = 95069 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 ||||||||| || |||||||||| ||||||||||||||| ||| ||||||||||||||| Sbjct: 30660 gtcgtctccctcgactaccgccttgcgcccgagcaccgcctccccgccgcctacgacgac 30601 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 |||||||||| || ||||||||||||||||||||||| Sbjct: 30769 gctccccgtcatcctctacttccacggcggcggcttc 30733
>dbj|AK106054.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F06, full insert sequence Length = 1297 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 ||||||||| || |||||||||| ||||||||||||||| ||| ||||||||||||||| Sbjct: 390 gtcgtctccctcgactaccgccttgcgcccgagcaccgcctccccgccgcctacgacgac 449 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 |||||||||| || ||||||||||||||||||||||| Sbjct: 281 gctccccgtcatcctctacttccacggcggcggcttc 317
>ref|XM_466311.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1251 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/62 (91%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 483 cgtctccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgact 541 |||||||||| |||||||||||||||||||||| ||||| |||||| | ||||||||||| Sbjct: 459 cgtctccgtcgactaccgcctcgcgcccgagcacccgct-cccggcgggctacgacgact 517 Query: 542 gc 543 || Sbjct: 518 gc 519 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 373 ctccccgtcctcgtctacttccacggcggcgg 404 ||||||||| |||||||| | ||||||||||| Sbjct: 349 ctccccgtcgtcgtctacgtgcacggcggcgg 380
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/62 (91%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 483 cgtctccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgact 541 |||||||||| |||||||||||||||||||||| ||||| |||||| | ||||||||||| Sbjct: 21607618 cgtctccgtcgactaccgcctcgcgcccgagcacccgct-cccggcgggctacgacgact 21607676 Query: 542 gc 543 || Sbjct: 21607677 gc 21607678 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 373 ctccccgtcctcgtctacttccacggcggcgg 404 ||||||||| |||||||| | ||||||||||| Sbjct: 21607508 ctccccgtcgtcgtctacgtgcacggcggcgg 21607539 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcccctgcggcggcggcggc 359 |||||||||||||||||||| Sbjct: 11008589 tcccctgcggcggcggcggc 11008608
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/62 (91%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 483 cgtctccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgact 541 |||||||||| |||||||||||||||||||||| ||||| |||||| | ||||||||||| Sbjct: 96568 cgtctccgtcgactaccgcctcgcgcccgagcacccgct-cccggcgggctacgacgact 96626 Query: 542 gc 543 || Sbjct: 96627 gc 96628 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 373 ctccccgtcctcgtctacttccacggcggcgg 404 ||||||||| |||||||| | ||||||||||| Sbjct: 96458 ctccccgtcgtcgtctacgtgcacggcggcgg 96489
>dbj|AK105793.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H09, full insert sequence Length = 1251 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/62 (91%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 483 cgtctccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgact 541 |||||||||| |||||||||||||||||||||| ||||| |||||| | ||||||||||| Sbjct: 459 cgtctccgtcgactaccgcctcgcgcccgagcacccgct-cccggcgggctacgacgact 517 Query: 542 gc 543 || Sbjct: 518 gc 519 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 373 ctccccgtcctcgtctacttccacggcggcgg 404 ||||||||| |||||||| | ||||||||||| Sbjct: 349 ctccccgtcgtcgtctacgtgcacggcggcgg 380
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 63.9 bits (32), Expect = 6e-07 Identities = 55/60 (91%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 483 cgtctccgtcaactaccgcctcgcgcccgagcacc-gctacccggccgcctacgacgact 541 |||| |||||||||||||||||||||||||||||| ||| |||| | ||||||||||||| Sbjct: 17092034 cgtcgccgtcaactaccgcctcgcgcccgagcacctgct-cccgacagcctacgacgact 17091976 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 |||||||||||| | |||||||||||||||||||||| Sbjct: 17417183 gtcgtctccgtcgagtaccgcctcgcgcccgagcacc 17417147 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 ||||||||||||||||| ||||||||| ||||||||| Sbjct: 17362969 gctccccgtcctcgtcttcttccacggaggcggcttc 17363005 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 379 gtcctcgtctacttccacggcggcggcttca 409 |||||||| |||||||||||||||||||||| Sbjct: 17370157 gtcctcgtgtacttccacggcggcggcttca 17370187 Score = 54.0 bits (27), Expect = 6e-04 Identities = 53/59 (89%), Gaps = 2/59 (3%) Strand = Plus / Minus Query: 484 gtctccgtcaactaccgcctcgcgcccgagcacc-gctacccggccgcctacgacgact 541 ||||||||| ||||||||||||| |||||||||| ||| |||||| || |||||||||| Sbjct: 17117757 gtctccgtcgactaccgcctcgctcccgagcacctgct-cccggcggcgtacgacgact 17117700 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 483 cgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 ||||||||| | |||||||||||||| ||||||| | ||| ||||||||||||||| Sbjct: 17373175 cgtctccgtggagtaccgcctcgcgccggagcaccccgtccccgccgcctacgacgac 17373232 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 ||||||||||||||||| |||||| || ||||||||| Sbjct: 17418084 gctccccgtcctcgtcttcttccatggaggcggcttc 17418120 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||||||||| ||||||||||||| |||||||||| Sbjct: 15955382 gtcgtctccgtggactaccgcctcgcccccgagcacc 15955418 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcg 403 |||||||||| |||||| |||||||||||||| Sbjct: 17359899 gctccccgtcgtcgtcttcttccacggcggcg 17359930 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 494 actaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 ||||||||||||| || ||||| | | ||||||||||||||||||| Sbjct: 17406938 actaccgcctcgccccggagcagcccgtcccggccgcctacgacgac 17406892 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 383 tcgtctacttccacggcggcggc 405 ||||||||||||||||||||||| Sbjct: 17404668 tcgtctacttccacggcggcggc 17404690 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 379 gtcctcgtctacttccacggcggcggcttca 409 |||||||| ||||||||||||||||| |||| Sbjct: 17366781 gtcctcgtgtacttccacggcggcggattca 17366811 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggc 402 ||||||| ||||||||| ||||||||||||| Sbjct: 17117869 gctccccatcctcgtcttcttccacggcggc 17117839 Score = 44.1 bits (22), Expect = 0.53 Identities = 45/50 (90%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 493 aactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgact 541 ||||||||||||||||| ||||| ||||| |||||| || |||||||||| Sbjct: 17394403 aactaccgcctcgcgccggagcacccgct-cccggcagcgtacgacgact 17394355 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 376 cccgtcctcgtctacttccacggcgg 401 ||||||||||||| |||||||||||| Sbjct: 17373068 cccgtcctcgtcttcttccacggcgg 17373093 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 380 tcctcgtctacttccacggcggcggcttc 408 ||||| |||||||||| |||||||||||| Sbjct: 17417284 tcctcatctacttccatggcggcggcttc 17417256 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 tcccctgcggcggcggcggcc 360 ||||||||||||||||||||| Sbjct: 9144473 tcccctgcggcggcggcggcc 9144493 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 actaccgcctcgcgcccgagcacc 517 |||||||||||||||| ||||||| Sbjct: 17413160 actaccgcctcgcgccggagcacc 17413183
>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1342C04 Length = 172097 Score = 63.9 bits (32), Expect = 6e-07 Identities = 55/60 (91%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 483 cgtctccgtcaactaccgcctcgcgcccgagcacc-gctacccggccgcctacgacgact 541 |||| |||||||||||||||||||||||||||||| ||| |||| | ||||||||||||| Sbjct: 32791 cgtcgccgtcaactaccgcctcgcgcccgagcacctgct-cccgacagcctacgacgact 32733 Score = 54.0 bits (27), Expect = 6e-04 Identities = 53/59 (89%), Gaps = 2/59 (3%) Strand = Plus / Minus Query: 484 gtctccgtcaactaccgcctcgcgcccgagcacc-gctacccggccgcctacgacgact 541 ||||||||| ||||||||||||| |||||||||| ||| |||||| || |||||||||| Sbjct: 58514 gtctccgtcgactaccgcctcgctcccgagcacctgct-cccggcggcgtacgacgact 58457 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggc 402 ||||||| ||||||||| ||||||||||||| Sbjct: 58626 gctccccatcctcgtcttcttccacggcggc 58596
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 63.9 bits (32), Expect = 6e-07 Identities = 55/60 (91%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 483 cgtctccgtcaactaccgcctcgcgcccgagcacc-gctacccggccgcctacgacgact 541 |||| |||||||||||||||||||||||||||||| ||| |||| | ||||||||||||| Sbjct: 85693 cgtcgccgtcaactaccgcctcgcgcccgagcacctgct-cccgacagcctacgacgact 85635 Score = 54.0 bits (27), Expect = 6e-04 Identities = 53/59 (89%), Gaps = 2/59 (3%) Strand = Plus / Minus Query: 484 gtctccgtcaactaccgcctcgcgcccgagcacc-gctacccggccgcctacgacgact 541 ||||||||| ||||||||||||| |||||||||| ||| |||||| || |||||||||| Sbjct: 111416 gtctccgtcgactaccgcctcgctcccgagcacctgct-cccggcggcgtacgacgact 111359 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggc 402 ||||||| ||||||||| ||||||||||||| Sbjct: 111528 gctccccatcctcgtcttcttccacggcggc 111498
>dbj|AK065686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042H09, full insert sequence Length = 1283 Score = 63.9 bits (32), Expect = 6e-07 Identities = 55/60 (91%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 483 cgtctccgtcaactaccgcctcgcgcccgagcacc-gctacccggccgcctacgacgact 541 |||| |||||||||||||||||||||||||||||| ||| |||| | ||||||||||||| Sbjct: 376 cgtcgccgtcaactaccgcctcgcgcccgagcacctgct-cccgacagcctacgacgact 434
>ref|XM_469930.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1029 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgccta 533 |||||| ||| |||||| | ||||||||||||| |||||||||||| ||| |||||| | Sbjct: 330 cgccgtcgtcctctccgccgactaccgcctcgcccccgagcaccgcctccccgccgccca 389 Query: 534 cgacgac 540 ||||||| Sbjct: 390 cgacgac 396 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcgg 404 |||||| || ||||||||||||||||||||||| Sbjct: 228 gctcccggtgctcgtctacttccacggcggcgg 260
>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0122P24, complete sequence Length = 136104 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtg 546 |||||| ||||||||| | |||| ||||||||||||||| | ||||||||||| || | Sbjct: 89149 tccgtcgactaccgccgctcgccggagcaccgctacccgacaccctacgacgacggcctc 89208 Query: 547 gacgtgctccgctacctcggcgacccc 573 | || |||||||| ||||| ||||||| Sbjct: 89209 gccgcgctccgcttcctcgacgacccc 89235 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtg 546 |||||| ||||||||| | |||| ||||||||||||||| | ||||||||||| || | Sbjct: 57833 tccgtcgactaccgccgctcgccggagcaccgctacccgacgccctacgacgacggcctc 57892 Query: 547 gacgtgctccgctacctcggcgacccc 573 | || |||||||| ||||| ||||||| Sbjct: 57893 gccgcgctccgcttcctcgacgacccc 57919 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 373 ctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgc 422 ||||||||| |||||| ||||||||||||||| ||| || | |||||||| Sbjct: 114015 ctccccgtcatcgtcttcttccacggcggcgggttcgcgttcctctccgc 114064
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgccta 533 |||||| ||| |||||| | ||||||||||||| |||||||||||| ||| |||||| | Sbjct: 32547931 cgccgtcgtcctctccgccgactaccgcctcgcccccgagcaccgcctccccgccgccca 32547990 Query: 534 cgacgac 540 ||||||| Sbjct: 32547991 cgacgac 32547997 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 486 ctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||| |||||||||||||||||||||||||| Sbjct: 7983085 ctccgtcgactaccgcctcgcgcccgagcaccgc 7983052 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcgg 404 |||||| || ||||||||||||||||||||||| Sbjct: 32547829 gctcccggtgctcgtctacttccacggcggcgg 32547861 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ccgcgccgccggcgctgccg 144 |||||||||||||||||||| Sbjct: 25576430 ccgcgccgccggcgctgccg 25576411
>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042K08, from chromosome 2, complete sequence Length = 164628 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtg 546 |||||| ||||||||| | |||| ||||||||||||||| | ||||||||||| || | Sbjct: 57829 tccgtcgactaccgccgctcgccggagcaccgctacccgacaccctacgacgacggcctc 57888 Query: 547 gacgtgctccgctacctcggcgacccc 573 | || |||||||| ||||| ||||||| Sbjct: 57889 gccgcgctccgcttcctcgacgacccc 57915 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtg 546 |||||| ||||||||| | |||| ||||||||||||||| | ||||||||||| || | Sbjct: 26513 tccgtcgactaccgccgctcgccggagcaccgctacccgacgccctacgacgacggcctc 26572 Query: 547 gacgtgctccgctacctcggcgacccc 573 | || |||||||| ||||| ||||||| Sbjct: 26573 gccgcgctccgcttcctcgacgacccc 26599 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 373 ctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgc 422 ||||||||| |||||| ||||||||||||||| ||| || | |||||||| Sbjct: 82695 ctccccgtcatcgtcttcttccacggcggcgggttcgcgttcctctccgc 82744
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtg 546 |||||| ||||||||| | |||| ||||||||||||||| | ||||||||||| || | Sbjct: 7412965 tccgtcgactaccgccgctcgccggagcaccgctacccgacgccctacgacgacggcctc 7412906 Query: 547 gacgtgctccgctacctcggcgacccc 573 | || |||||||| ||||| ||||||| Sbjct: 7412905 gccgcgctccgcttcctcgacgacccc 7412879 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtg 546 |||||| ||||||||| | |||| ||||||||||||||| | ||||||||||| || | Sbjct: 7381649 tccgtcgactaccgccgctcgccggagcaccgctacccgacaccctacgacgacggcctc 7381590 Query: 547 gacgtgctccgctacctcggcgacccc 573 | || |||||||| ||||| ||||||| Sbjct: 7381589 gccgcgctccgcttcctcgacgacccc 7381563 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 373 ctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgc 422 ||||||||| |||||| ||||||||||||||| ||| || | |||||||| Sbjct: 7356783 ctccccgtcatcgtcttcttccacggcggcgggttcgcgttcctctccgc 7356734 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 340 tcccctgcggcggcggcggccgg 362 ||||||||||||||||||||||| Sbjct: 25386019 tcccctgcggcggcggcggccgg 25385997
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgccta 533 |||||| ||| |||||| | ||||||||||||| |||||||||||| ||| |||||| | Sbjct: 32638441 cgccgtcgtcctctccgccgactaccgcctcgcccccgagcaccgcctccccgccgccca 32638500 Query: 534 cgacgac 540 ||||||| Sbjct: 32638501 cgacgac 32638507 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 486 ctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||| |||||||||||||||||||||||||| Sbjct: 7980920 ctccgtcgactaccgcctcgcgcccgagcaccgc 7980887 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcgg 404 |||||| || ||||||||||||||||||||||| Sbjct: 32638339 gctcccggtgctcgtctacttccacggcggcgg 32638371 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ccgcgccgccggcgctgccg 144 |||||||||||||||||||| Sbjct: 25667739 ccgcgccgccggcgctgccg 25667720
>gb|AF110333.2|AF110333 Pinus radiata PrMC3 mRNA, complete cds Length = 1108 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacga 539 ||||||| |||| ||||||||||||||||||||| ||| |||||||||||||| Sbjct: 365 tctccgtagactatcgcctcgcgcccgagcaccgcctccccgccgcctacgacga 419
>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete sequence Length = 119134 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgccta 533 |||||| ||| |||||| | ||||||||||||| |||||||||||| ||| |||||| | Sbjct: 81380 cgccgtcgtcctctccgccgactaccgcctcgcccccgagcaccgcctccccgccgccca 81439 Query: 534 cgacgac 540 ||||||| Sbjct: 81440 cgacgac 81446 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcgg 404 |||||| || ||||||||||||||||||||||| Sbjct: 81278 gctcccggtgctcgtctacttccacggcggcgg 81310
>dbj|AK120858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024E02, full insert sequence Length = 1315 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtg 546 |||||| ||||||||| | |||| ||||||||||||||| | ||||||||||| || | Sbjct: 355 tccgtcgactaccgccgctcgccggagcaccgctacccgacgccctacgacgacggcctc 414 Query: 547 gacgtgctccgctacctcggcgacccc 573 | || |||||||| ||||| ||||||| Sbjct: 415 gccgcgctccgcttcctcgacgacccc 441
>dbj|AK107136.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C10, full insert sequence Length = 1328 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgccta 533 |||||| ||| |||||| | ||||||||||||| |||||||||||| ||| |||||| | Sbjct: 418 cgccgtcgtcctctccgccgactaccgcctcgcccccgagcaccgcctccccgccgccca 477 Query: 534 cgacgac 540 ||||||| Sbjct: 478 cgacgac 484 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcgg 404 |||||| || ||||||||||||||||||||||| Sbjct: 316 gctcccggtgctcgtctacttccacggcggcgg 348
>dbj|AK061589.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G12, full insert sequence Length = 1437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtg 546 |||||| ||||||||| | |||| ||||||||||||||| | ||||||||||| || | Sbjct: 477 tccgtcgactaccgccgctcgccggagcaccgctacccgacgccctacgacgacggcctc 536 Query: 547 gacgtgctccgctacctcggcgacccc 573 | || |||||||| ||||| ||||||| Sbjct: 537 gccgcgctccgcttcctcgacgacccc 563
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtg 546 |||||| ||||||||| | |||| ||||||||||||||| | ||||||||||| || | Sbjct: 7483051 tccgtcgactaccgccgctcgccggagcaccgctacccgacgccctacgacgacggcctc 7482992 Query: 547 gacgtgctccgctacctcggcgacccc 573 | || |||||||| ||||| ||||||| Sbjct: 7482991 gccgcgctccgcttcctcgacgacccc 7482965 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgactgcgtg 546 |||||| ||||||||| | |||| ||||||||||||||| | ||||||||||| || | Sbjct: 7451735 tccgtcgactaccgccgctcgccggagcaccgctacccgacaccctacgacgacggcctc 7451676 Query: 547 gacgtgctccgctacctcggcgacccc 573 | || |||||||| ||||| ||||||| Sbjct: 7451675 gccgcgctccgcttcctcgacgacccc 7451649 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 373 ctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgc 422 ||||||||| |||||| ||||||||||||||| ||| || | |||||||| Sbjct: 7426869 ctccccgtcatcgtcttcttccacggcggcgggttcgcgttcctctccgc 7426820 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 340 tcccctgcggcggcggcggccgg 362 ||||||||||||||||||||||| Sbjct: 25704689 tcccctgcggcggcggcggccgg 25704667
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10, complete sequence Length = 150825 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||||||||||| | |||||| ||||||||||||||| ||| ||||||||| Sbjct: 53829 tccgtcaactaccggcgcgcgccggagcaccgctacccgtgcgcgtacgacgac 53882
>ref|XM_475216.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1065 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||||||||||| | |||||| ||||||||||||||| ||| ||||||||| Sbjct: 451 tccgtcaactaccggcgcgcgccggagcaccgctacccgtgcgcgtacgacgac 504
>ref|NM_197696.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0014I11.15), mRNA Length = 816 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 482 tcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 |||||||| || |||||||||||||||||||||||| | ||| |||||||||| Sbjct: 539 tcgtctccctcgactaccgcctcgcgcccgagcaccacctccccgccgcctacg 592
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 370 ccgctccccgtcctcgtctacttccacggcggcggcttcacg 411 ||||| ||||| |||||||||| ||||||||||||||||||| Sbjct: 1484773 ccgctgcccgtgctcgtctactaccacggcggcggcttcacg 1484732
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 370 ccgctccccgtcctcgtctacttccacggcggcggcttcacg 411 ||||| ||||| |||||||||| ||||||||||||||||||| Sbjct: 2715288 ccgctgcccgtgctcgtctactaccacggcggcggcttcacg 2715247
>gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1657_H11, complete sequence Length = 98103 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||||||||||| | |||||| ||||||||||||||| ||| ||||||||| Sbjct: 90756 tccgtcaactaccggcgcgcgccggagcaccgctacccgtgcgcgtacgacgac 90809 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gcgcggcccgcgccgccggc 137 |||||||||||||||||||| Sbjct: 6435 gcgcggcccgcgccgccggc 6454
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 370 ccgctccccgtcctcgtctacttccacggcggcggcttcacg 411 ||||| ||||| |||||||||| ||||||||||||||||||| Sbjct: 1668181 ccgctgcccgtgctcgtctactaccacggcggcggcttcacg 1668222
>dbj|AB211399.1| Oryza sativa (japonica cultivar-group) gid1 mRNA for gibberellin insensitive dwarf1, complete cds Length = 2156 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||||||||||| | |||||| ||||||||||||||| ||| ||||||||| Sbjct: 873 tccgtcaactaccggcgcgcgccggagcaccgctacccgtgcgcgtacgacgac 926
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 482 tcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 |||||||| || |||||||||||||||||||||||| | ||| |||||||||| Sbjct: 30113 tcgtctccctcgactaccgcctcgcgcccgagcaccacctccccgccgcctacg 30060
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 482 tcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 |||||||| || |||||||||||||||||||||||| | ||| |||||||||| Sbjct: 21304246 tcgtctccctcgactaccgcctcgcgcccgagcaccacctccccgccgcctacg 21304299
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||||||||||| | |||||| ||||||||||||||| ||| ||||||||| Sbjct: 19725755 tccgtcaactaccggcgcgcgccggagcaccgctacccgtgcgcgtacgacgac 19725808 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 474 cgccgtggtcgtctccgtcaactaccg 500 |||||| |||||||||||||||||||| Sbjct: 1777827 cgccgttgtcgtctccgtcaactaccg 1777801 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 tctacttccacggcggcggcttcac 410 ||||||||||||||||||| ||||| Sbjct: 1987819 tctacttccacggcggcggtttcac 1987843 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gcggcggcggcggccgggca 365 |||||||||||||||||||| Sbjct: 26165734 gcggcggcggcggccgggca 26165715 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gcgcggcccgcgccgccggc 137 |||||||||||||||||||| Sbjct: 19641426 gcgcggcccgcgccgccggc 19641445 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ccctgcggcggcggcggccg 361 |||||||||||||||||||| Sbjct: 6267629 ccctgcggcggcggcggccg 6267610
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 486 ctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||| |||||||||||||||||||||||||| Sbjct: 50448 ctccgtcgactaccgcctcgcgcccgagcaccgc 50415
>dbj|AK074026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079J03, full insert sequence Length = 2156 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||||||||||| | |||||| ||||||||||||||| ||| ||||||||| Sbjct: 873 tccgtcaactaccggcgcgcgccggagcaccgctacccgtgcgcgtacgacgac 926
>gb|AY623658.2| Aeromicrobium erythreum putative transcriptional repressor and putative dehydrogenase/reductase genes, complete cds; erythromycin biosynthesis gene cluster, complete sequence; putative oxidoreductase and LipN genes, complete cds; monoamine oxidase gene, partial cds; and unknown gene Length = 61845 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 484 gtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccg 529 ||||||||| ||||||||||||| |||||||||| || |||||||| Sbjct: 60173 gtctccgtcgactaccgcctcgcccccgagcaccccttcccggccg 60218 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 381 cctcgtctacttccacggcggcgg 404 |||||||||||||||||||||||| Sbjct: 60076 cctcgtctacttccacggcggcgg 60099
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 482 tcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 |||||||| || |||||||||||||||||||||||| | ||| |||||||||| Sbjct: 21315510 tcgtctccctcgactaccgcctcgcgcccgagcaccacctccccgccgcctacg 21315563
>ref|XM_482926.1| Oryza sativa (japonica cultivar-group), mRNA Length = 990 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 |||||||||| |||| ||||||||||||||||||||| Sbjct: 213 gctccccgtcgtcgtgtacttccacggcggcggcttc 249 Score = 54.0 bits (27), Expect = 6e-04 Identities = 50/55 (90%), Gaps = 2/55 (3%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgac 540 |||||| |||||||||||||||| ||||| ||||| ||| ||||||||||||||| Sbjct: 328 tccgtcgactaccgcctcgcgccggagcacccgct-ccccgccgcctacgacgac 381
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451G12 Length = 142182 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 |||||||||| |||| ||||||||||||||||||||| Sbjct: 84004 gctccccgtcgtcgtgtacttccacggcggcggcttc 83968 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 |||||||||||| | |||||||||||||| ||||||| | |||||| ||||||| Sbjct: 93767 gtcgtctccgtcgagtaccgcctcgcgccggagcaccccgtcccggcggcctacg 93821 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcacc 517 |||||| |||||||||||||||||||||||| Sbjct: 92099 tccgtcgactaccgcctcgcgcccgagcacc 92129 Score = 54.0 bits (27), Expect = 6e-04 Identities = 50/55 (90%), Gaps = 2/55 (3%) Strand = Plus / Minus Query: 487 tccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgac 540 |||||| |||||||||||||||| ||||| ||||| ||| ||||||||||||||| Sbjct: 83889 tccgtcgactaccgcctcgcgccggagcacccgct-ccccgccgcctacgacgac 83836 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcgg 404 ||||||||| |||||||||| |||||||||||| Sbjct: 93658 gctccccgtgctcgtctactaccacggcggcgg 93690 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcg 403 |||||| || ||| |||||||||||||||||| Sbjct: 87143 gctcccggtgctcatctacttccacggcggcg 87112
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 |||||||||||| | |||||||||||||||||||||| Sbjct: 141096 gtcgtctccgtcgagtaccgcctcgcgcccgagcacc 141060 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 ||||||||||||||||| ||||||||| ||||||||| Sbjct: 86882 gctccccgtcctcgtcttcttccacggaggcggcttc 86918 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 379 gtcctcgtctacttccacggcggcggcttca 409 |||||||| |||||||||||||||||||||| Sbjct: 94070 gtcctcgtgtacttccacggcggcggcttca 94100 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 483 cgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 ||||||||| | |||||||||||||| ||||||| | ||| ||||||||||||||| Sbjct: 97088 cgtctccgtggagtaccgcctcgcgccggagcaccccgtccccgccgcctacgacgac 97145 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 ||||||||||||||||| |||||| || ||||||||| Sbjct: 141997 gctccccgtcctcgtcttcttccatggaggcggcttc 142033 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcg 403 |||||||||| |||||| |||||||||||||| Sbjct: 83812 gctccccgtcgtcgtcttcttccacggcggcg 83843 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 494 actaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 ||||||||||||| || ||||| | | ||||||||||||||||||| Sbjct: 130851 actaccgcctcgccccggagcagcccgtcccggccgcctacgacgac 130805 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 383 tcgtctacttccacggcggcggc 405 ||||||||||||||||||||||| Sbjct: 128581 tcgtctacttccacggcggcggc 128603 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 379 gtcctcgtctacttccacggcggcggcttca 409 |||||||| ||||||||||||||||| |||| Sbjct: 90694 gtcctcgtgtacttccacggcggcggattca 90724 Score = 44.1 bits (22), Expect = 0.53 Identities = 45/50 (90%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 493 aactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgact 541 ||||||||||||||||| ||||| ||||| |||||| || |||||||||| Sbjct: 118316 aactaccgcctcgcgccggagcacccgct-cccggcagcgtacgacgact 118268 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 376 cccgtcctcgtctacttccacggcgg 401 ||||||||||||| |||||||||||| Sbjct: 96981 cccgtcctcgtcttcttccacggcgg 97006 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 380 tcctcgtctacttccacggcggcggcttc 408 ||||| |||||||||| |||||||||||| Sbjct: 141197 tcctcatctacttccatggcggcggcttc 141169 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 actaccgcctcgcgcccgagcacc 517 |||||||||||||||| ||||||| Sbjct: 137073 actaccgcctcgcgccggagcacc 137096
>dbj|AK073449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C15, full insert sequence Length = 1108 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 ||||||||||||||||| ||||||||| ||||||||| Sbjct: 681 gctccccgtcctcgtcttcttccacggaggcggcttc 645
>dbj|AK067180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M19, full insert sequence Length = 1117 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 ||||||||||||||||| ||||||||| ||||||||| Sbjct: 281 gctccccgtcctcgtcttcttccacggaggcggcttc 317
>dbj|AK064734.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-C05, full insert sequence Length = 1162 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 |||||||||||| | |||||||||||||||||||||| Sbjct: 376 gtcgtctccgtcgagtaccgcctcgcgcccgagcacc 412 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 tcctcgtctacttccacggcggcggcttc 408 ||||| |||||||||| |||||||||||| Sbjct: 275 tcctcatctacttccatggcggcggcttc 303
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 478 gtggtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 4248084 gtggtcgtctcggtcgactaccgccgcgcgcccgagcacc 4248045 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 475 gccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctac 534 |||||||| ||| |||| | ||||| |||||||||||||| |||||||| | |||| || Sbjct: 3586536 gccgtggtggtcaacgtcgagtaccggctcgcgcccgagcatcgctaccccgtcgccaac 3586595 Query: 535 gacga 539 ||||| Sbjct: 3586596 gacga 3586600 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 cgcggcccgcgccgccggcgc 139 ||||||||||||||||||||| Sbjct: 3321706 cgcggcccgcgccgccggcgc 3321726 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gcgcgcggcccgcgccgccg 135 |||||||||||||||||||| Sbjct: 4265403 gcgcgcggcccgcgccgccg 4265384
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 475 gccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgc 530 ||||| ||||| |||||| ||||||||||||| ||||| |||| |||||| ||||| Sbjct: 182626 gccgtcgtcgtatccgtcgactaccgcctcgcccccgaacacccctaccccgccgc 182681
>ref|NM_184413.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggct 406 ||||||||| |||||||||||||||||||| |||| Sbjct: 303 gctccccgtgctcgtctacttccacggcggtggct 337
>ref|XM_482929.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 |||||||||||| | |||||||||||||| ||||||| | |||||| ||||||| Sbjct: 431 gtcgtctccgtcgagtaccgcctcgcgccggagcaccccgtcccggcggcctacg 485 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcgg 404 ||||||||| |||||||||| |||||||||||| Sbjct: 322 gctccccgtgctcgtctactaccacggcggcgg 354
>ref|XM_507269.1| PREDICTED Oryza sativa (japonica cultivar-group), P0451G12.24 mRNA Length = 1426 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 |||||||||||| | |||||||||||||| ||||||| | |||||| ||||||| Sbjct: 433 gtcgtctccgtcgagtaccgcctcgcgccggagcaccccgtcccggcggcctacg 487 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcgg 404 ||||||||| |||||||||| |||||||||||| Sbjct: 324 gctccccgtgctcgtctactaccacggcggcgg 356
>ref|XM_482928.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcacc 517 |||||| |||||||||||||||||||||||| Sbjct: 331 tccgtcgactaccgcctcgcgcccgagcacc 361
>ref|NM_186425.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1559 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 465 cgagctgggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||||||||| |||||| | | ||||||||||||| |||||||||||| Sbjct: 504 cgagctgggcgccgtcgtcgtcgcgcccgactaccgcctcgctcccgagcaccgc 558
>ref|NM_186422.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1189 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 382 ctcgtctacttccacggcggcggcttc 408 ||||||||||||||||||||||||||| Sbjct: 277 ctcgtctacttccacggcggcggcttc 303 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacga 536 |||||| | ||||||||||||| |||||||||||| ||| ||||| ||||| Sbjct: 380 tctccgccgactaccgcctcgcccccgagcaccgcctccccgccgcgtacga 431
>ref|XM_506174.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.153 mRNA Length = 1772 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 382 ctcgtctacttccacggcggcggcttc 408 ||||||||||||||||||||||||||| Sbjct: 277 ctcgtctacttccacggcggcggcttc 303 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacga 536 |||||| | ||||||||||||| |||||||||||| ||| ||||| ||||| Sbjct: 380 tctccgccgactaccgcctcgcccccgagcaccgcctccccgccgcgtacga 431
>ref|NM_186419.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1248 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 374 tccccgtcctcgtctacttccacggcggcggcttc 408 |||||||| ||| |||||||||||||||||||||| Sbjct: 288 tccccgtcgtcgcctacttccacggcggcggcttc 322
>gb|BT018514.1| Zea mays clone EL01N0430E04.d mRNA sequence Length = 1271 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 483 cgtctccgtcaactaccgcctcgcgcccgagcacc 517 |||||||||| |||||||||| ||||||||||||| Sbjct: 410 cgtctccgtcgactaccgcctggcgcccgagcacc 444 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 376 cccgtcctcgtctacttccacggcggcggcttc 408 |||||| |||| ||| ||||||||||||||||| Sbjct: 303 cccgtcgtcgtgtacgtccacggcggcggcttc 335
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 382 ctcgtctacttccacggcggcggcttc 408 ||||||||||||||||||||||||||| Sbjct: 114809 ctcgtctacttccacggcggcggcttc 114783
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 494 actaccgcctcgcgcccgagcaccgct 520 ||||||||||||||||||||||||||| Sbjct: 440831 actaccgcctcgcgcccgagcaccgct 440857 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 388 tacttccacggcggcggcttcacg 411 |||| ||||||||||||||||||| Sbjct: 2410202 tactaccacggcggcggcttcacg 2410225
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggct 406 ||||||||| |||||||||||||||||||| |||| Sbjct: 2954243 gctccccgtgctcgtctacttccacggcggtggct 2954209 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggct 406 ||||||||| |||||||||||||||||||| |||| Sbjct: 2896161 gctccccgtgctcgtctacttccacggcggtggct 2896195 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 ctcgtctacttccacggcggcggct 406 ||||||| ||||||||||||||||| Sbjct: 2957163 ctcgtctgcttccacggcggcggct 2957139 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 332 gcgtctactcccctgcggcggcggcggc 359 |||||| ||| ||||||||||||||||| Sbjct: 30034554 gcgtctcctctcctgcggcggcggcggc 30034581 Score = 40.1 bits (20), Expect = 8.3 Identities = 47/56 (83%) Strand = Plus / Minus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||| | |||||||||||| |||||||||||| ||| |||||| ||||||| Sbjct: 2957060 tctccgccgactaccgcctcggccccgagcaccgcctccccgccgccatcgacgac 2957005
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggct 406 ||||||||| |||||||||||||||||||| |||| Sbjct: 35760 gctccccgtgctcgtctacttccacggcggtggct 35726 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 ctcgtctacttccacggcggcggct 406 ||||||| ||||||||||||||||| Sbjct: 38680 ctcgtctgcttccacggcggcggct 38656 Score = 40.1 bits (20), Expect = 8.3 Identities = 47/56 (83%) Strand = Plus / Minus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||| | |||||||||||| |||||||||||| ||| |||||| ||||||| Sbjct: 38577 tctccgccgactaccgcctcggccccgagcaccgcctccccgccgccatcgacgac 38522
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0030H07 Length = 168253 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggct 406 ||||||||| |||||||||||||||||||| |||| Sbjct: 161241 gctccccgtgctcgtctacttccacggcggtggct 161207 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggct 406 ||||||||| |||||||||||||||||||| |||| Sbjct: 103159 gctccccgtgctcgtctacttccacggcggtggct 103193 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 ctcgtctacttccacggcggcggct 406 ||||||| ||||||||||||||||| Sbjct: 164161 ctcgtctgcttccacggcggcggct 164137 Score = 40.1 bits (20), Expect = 8.3 Identities = 47/56 (83%) Strand = Plus / Minus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||| | |||||||||||| |||||||||||| ||| |||||| ||||||| Sbjct: 164058 tctccgccgactaccgcctcggccccgagcaccgcctccccgccgccatcgacgac 164003
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0428D12 Length = 141678 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 465 cgagctgggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||||||||| |||||| | | ||||||||||||| |||||||||||| Sbjct: 33028 cgagctgggcgccgtcgtcgtcgcgcccgactaccgcctcgctcccgagcaccgc 32974 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 382 ctcgtctacttccacggcggcggcttc 408 ||||||||||||||||||||||||||| Sbjct: 18247 ctcgtctacttccacggcggcggcttc 18221 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 374 tccccgtcctcgtctacttccacggcggcggcttc 408 |||||||| ||| |||||||||||||||||||||| Sbjct: 5821 tccccgtcgtcgcctacttccacggcggcggcttc 5787 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 15152 cgccgtggtgctctccttcgactaccgcctcgcgccggagcaccgc 15107 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Minus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacga 536 |||||| | ||||||||||||| |||||||||||| ||| ||||| ||||| Sbjct: 18144 tctccgccgactaccgcctcgcccccgagcaccgcctccccgccgcgtacga 18093 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 382 ctcgtctacttccacggcggcgg 404 ||||||||||||||||||||||| Sbjct: 24302 ctcgtctacttccacggcggcgg 24280 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 496 taccgcctcgcgcccgagcaccgc 519 ||||||||||| |||||||||||| Sbjct: 24188 taccgcctcgcccccgagcaccgc 24165
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_E05 Length = 126978 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 |||||||||||| | |||||||||||||| ||||||| | |||||| ||||||| Sbjct: 3345 gtcgtctccgtcgagtaccgcctcgcgccggagcaccccgtcccggcggcctacg 3399 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcacc 517 |||||| |||||||||||||||||||||||| Sbjct: 1677 tccgtcgactaccgcctcgcgcccgagcacc 1707 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcgg 404 ||||||||| |||||||||| |||||||||||| Sbjct: 3236 gctccccgtgctcgtctactaccacggcggcgg 3268
>dbj|AK108359.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-C08, full insert sequence Length = 1059 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 379 gtcctcgtctacttccacggcggcggcttca 409 |||||||| |||||||||||||||||||||| Sbjct: 245 gtcctcgtgtacttccacggcggcggcttca 275
>dbj|AK106274.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-G12, full insert sequence Length = 1772 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 382 ctcgtctacttccacggcggcggcttc 408 ||||||||||||||||||||||||||| Sbjct: 277 ctcgtctacttccacggcggcggcttc 303 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacga 536 |||||| | ||||||||||||| |||||||||||| ||| ||||| ||||| Sbjct: 380 tctccgccgactaccgcctcgcccccgagcaccgcctccccgccgcgtacga 431
>dbj|AK106266.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-G01, full insert sequence Length = 1559 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 465 cgagctgggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||||||||| |||||| | | ||||||||||||| |||||||||||| Sbjct: 504 cgagctgggcgccgtcgtcgtcgcgcccgactaccgcctcgctcccgagcaccgc 558
>dbj|AK105789.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H03, full insert sequence Length = 1189 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 382 ctcgtctacttccacggcggcggcttc 408 ||||||||||||||||||||||||||| Sbjct: 277 ctcgtctacttccacggcggcggcttc 303 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacga 536 |||||| | ||||||||||||| |||||||||||| ||| ||||| ||||| Sbjct: 380 tctccgccgactaccgcctcgcccccgagcaccgcctccccgccgcgtacga 431
>dbj|AK073975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072F03, full insert sequence Length = 1377 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 |||||||||||| | |||||||||||||| ||||||| | |||||| ||||||| Sbjct: 431 gtcgtctccgtcgagtaccgcctcgcgccggagcaccccgtcccggcggcctacg 485 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcgg 404 ||||||||| |||||||||| |||||||||||| Sbjct: 322 gctccccgtgctcgtctactaccacggcggcgg 354
>dbj|AK061010.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-A12, full insert sequence Length = 1083 Score = 54.0 bits (27), Expect = 6e-04 Identities = 53/59 (89%), Gaps = 2/59 (3%) Strand = Plus / Plus Query: 484 gtctccgtcaactaccgcctcgcgcccgagcacc-gctacccggccgcctacgacgact 541 ||||||||| ||||||||||||| |||||||||| ||| |||||| || |||||||||| Sbjct: 408 gtctccgtcgactaccgcctcgctcccgagcacctgct-cccggcggcgtacgacgact 465 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggc 402 ||||||| ||||||||| ||||||||||||| Sbjct: 296 gctccccatcctcgtcttcttccacggcggc 326
>dbj|AK060706.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H02, full insert sequence Length = 1426 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 |||||||||||| | |||||||||||||| ||||||| | |||||| ||||||| Sbjct: 433 gtcgtctccgtcgagtaccgcctcgcgccggagcaccccgtcccggcggcctacg 487 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcgg 404 ||||||||| |||||||||| |||||||||||| Sbjct: 324 gctccccgtgctcgtctactaccacggcggcgg 356
>dbj|AK060082.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D11, full insert sequence Length = 1248 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 374 tccccgtcctcgtctacttccacggcggcggcttc 408 |||||||| ||| |||||||||||||||||||||| Sbjct: 288 tccccgtcgtcgcctacttccacggcggcggcttc 322
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 382 ctcgtctacttccacggcggcggcttc 408 ||||||||||||||||||||||||||| Sbjct: 188120 ctcgtctacttccacggcggcggcttc 188094 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 374 tccccgtcctcgtctacttccacggcggcggcttc 408 |||||||| ||| |||||||||||||||||||||| Sbjct: 175694 tccccgtcgtcgcctacttccacggcggcggcttc 175660 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 185025 cgccgtggtgctctccttcgactaccgcctcgcgccggagcaccgc 184980 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Minus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacga 536 |||||| | ||||||||||||| |||||||||||| ||| ||||| ||||| Sbjct: 188017 tctccgccgactaccgcctcgcccccgagcaccgcctccccgccgcgtacga 187966
>ref|NM_186421.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1199 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 408 cgccgtggtgctctccttcgactaccgcctcgcgccggagcaccgc 453
>ref|XM_507352.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.152 mRNA Length = 1375 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 417 cgccgtggtgctctccttcgactaccgcctcgcgccggagcaccgc 462
>ref|XM_506173.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.152 mRNA Length = 1378 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 417 cgccgtggtgctctccttcgactaccgcctcgcgccggagcaccgc 462
>gb|BT017391.1| Zea mays clone EL01N0327F05.c mRNA sequence Length = 1246 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttca 409 |||||| || || ||||||||||||||||||||||||| Sbjct: 292 gctcccggtgctggtctacttccacggcggcggcttca 329
>gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0023E20, complete sequence Length = 130827 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 373 ctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgc 422 ||||||||| |||||| ||||||||||||||| ||| || | |||||||| Sbjct: 6386 ctccccgtcatcgtcttcttccacggcggcgggttcgcgttcctctccgc 6435
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||| ||| ||||||||||||||||||| | | |||||| ||||||||||| Sbjct: 62317 tccgtcgacttccgcctcgcgcccgagcacggtttcccggcgccctacgacgac 62370 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 199 cgccgcgacgggaccgtaaaccgcttcctc 228 ||||||||||| ||||| |||||||||||| Sbjct: 62029 cgccgcgacggcaccgtcaaccgcttcctc 62058 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 tacttccacggcggcggcttc 408 ||||||||||||||||||||| Sbjct: 62218 tacttccacggcggcggcttc 62238
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 380 tcctcgtctacttccacggcggcggcttca 409 ||||||| |||||||||||||||||||||| Sbjct: 140125 tcctcgtgtacttccacggcggcggcttca 140154 Score = 48.1 bits (24), Expect = 0.034 Identities = 50/56 (89%), Gaps = 2/56 (3%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgact 541 |||||| | |||||||||||||||||||| ||||| ||| ||||| |||||||||| Sbjct: 140232 tccgtcgagtaccgcctcgcgcccgagcacccgct-ccccgccgcgtacgacgact 140286
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 380 tcctcgtctacttccacggcggcggcttca 409 ||||||| |||||||||||||||||||||| Sbjct: 25371 tcctcgtgtacttccacggcggcggcttca 25400 Score = 48.1 bits (24), Expect = 0.034 Identities = 50/56 (89%), Gaps = 2/56 (3%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgact 541 |||||| | |||||||||||||||||||| ||||| ||| ||||| |||||||||| Sbjct: 25478 tccgtcgagtaccgcctcgcgcccgagcacccgct-ccccgccgcgtacgacgact 25532
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||| ||| ||||||||||||||||||| | | |||||| ||||||||||| Sbjct: 113136 tccgtcgacttccgcctcgcgcccgagcacggtttcccggcgccctacgacgac 113189 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 199 cgccgcgacgggaccgtaaaccgcttcctc 228 ||||||||||| ||||| |||||||||||| Sbjct: 112848 cgccgcgacggcaccgtcaaccgcttcctc 112877 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 tacttccacggcggcggcttc 408 ||||||||||||||||||||| Sbjct: 113037 tacttccacggcggcggcttc 113057
>dbj|AK109579.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-A03, full insert sequence Length = 1204 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||| ||| ||||||||||||||||||| | | |||||| ||||||||||| Sbjct: 450 tccgtcgacttccgcctcgcgcccgagcacggtttcccggcgccctacgacgac 503 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 199 cgccgcgacgggaccgtaaaccgcttcctc 228 ||||||||||| ||||| |||||||||||| Sbjct: 162 cgccgcgacggcaccgtcaaccgcttcctc 191 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 tacttccacggcggcggcttc 408 ||||||||||||||||||||| Sbjct: 351 tacttccacggcggcggcttc 371
>dbj|AK108107.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-B08, full insert sequence Length = 1131 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 380 tcctcgtctacttccacggcggcggcttca 409 ||||||| |||||||||||||||||||||| Sbjct: 283 tcctcgtgtacttccacggcggcggcttca 312 Score = 48.1 bits (24), Expect = 0.034 Identities = 50/56 (89%), Gaps = 2/56 (3%) Strand = Plus / Plus Query: 487 tccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgact 541 |||||| | |||||||||||||||||||| ||||| ||| ||||| |||||||||| Sbjct: 390 tccgtcgagtaccgcctcgcgcccgagcacccgct-ccccgccgcgtacgacgact 444
>dbj|AK106142.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-G10, full insert sequence Length = 1199 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 408 cgccgtggtgctctccttcgactaccgcctcgcgccggagcaccgc 453
>dbj|AK106008.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A09, full insert sequence Length = 1375 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 417 cgccgtggtgctctccttcgactaccgcctcgcgccggagcaccgc 462
>dbj|AK065416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022N12, full insert sequence Length = 1377 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 373 ctccccgtcctcgtctacttccacggcggcggcttcacgctgctctccgc 422 ||||||||| |||||| ||||||||||||||| ||| || | |||||||| Sbjct: 351 ctccccgtcatcgtcttcttccacggcggcgggttcgcgttcctctccgc 400
>dbj|AK061530.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E02, full insert sequence Length = 1377 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagcaccgc 519 ||||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 417 cgccgtggtgctctccttcgactaccgcctcgcgccggagcaccgc 462
>ref|XM_462670.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 50.1 bits (25), Expect = 0.009 Identities = 60/69 (86%), Gaps = 2/69 (2%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcct 532 |||||| | |||||||||| ||||||||||||| || ||||| ||||| ||||||||| | Sbjct: 327 cgccgtcgccgtctccgtcgactaccgcctcgccccggagcacccgct-cccggccgcgt 385 Query: 533 acgacgact 541 |||| |||| Sbjct: 386 acgaggact 394
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 382 ctcgtctacttccacggcggcggct 406 ||||||||||||||||||||||||| Sbjct: 1376744 ctcgtctacttccacggcggcggct 1376720
>ref|XM_478487.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1320 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||| |||||| | |||||||||||||||||||||| Sbjct: 352 gtcgtgtccgtcgagtaccgcctcgcgcccgagcacc 388 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 376 cccgtcctcgtctacttccacggcggcggcttc 408 |||||| |||| ||||||||||||||| ||||| Sbjct: 247 cccgtcgtcgtgtacttccacggcggctgcttc 279
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.009 Identities = 60/69 (86%), Gaps = 2/69 (2%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcct 532 |||||| | |||||||||| ||||||||||||| || ||||| ||||| ||||||||| | Sbjct: 22386879 cgccgtcgccgtctccgtcgactaccgcctcgccccggagcacccgct-cccggccgcgt 22386937 Query: 533 acgacgact 541 |||| |||| Sbjct: 22386938 acgaggact 22386946
>dbj|AP005565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1238_G07 Length = 78304 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||||||||| ||||||||||||| |||||||||| Sbjct: 26095 gtcgtctccgtggactaccgcctcgcccccgagcacc 26131
>dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077J18 Length = 180944 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||| |||||| | |||||||||||||||||||||| Sbjct: 127384 gtcgtgtccgtcgagtaccgcctcgcgcccgagcacc 127348 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cccgtcctcgtctacttccacggcggcggcttc 408 |||||| |||| ||||||||||||||| ||||| Sbjct: 127489 cccgtcgtcgtgtacttccacggcggctgcttc 127457 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||| |||||| | |||||||||||||| ||||||| Sbjct: 51669 gtcgtgtccgtcgagtaccgcctcgcgccggagcacc 51705 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagca 515 |||||| | ||||| |||||| | |||||||||||||| ||||| Sbjct: 12924 ggcgccctcgtcgtgtccgtcgagtaccgcctcgcgccggagca 12967
>dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0007H12 Length = 150881 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||| |||||| | |||||||||||||||||||||| Sbjct: 37353 gtcgtgtccgtcgagtaccgcctcgcgcccgagcacc 37317 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cccgtcctcgtctacttccacggcggcggcttc 408 |||||| |||| ||||||||||||||| ||||| Sbjct: 37458 cccgtcgtcgtgtacttccacggcggctgcttc 37426
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 50.1 bits (25), Expect = 0.009 Identities = 60/69 (86%), Gaps = 2/69 (2%) Strand = Plus / Plus Query: 474 cgccgtggtcgtctccgtcaactaccgcctcgcgcccgagca-ccgctacccggccgcct 532 |||||| | |||||||||| ||||||||||||| || ||||| ||||| ||||||||| | Sbjct: 137783 cgccgtcgccgtctccgtcgactaccgcctcgccccggagcacccgct-cccggccgcgt 137841 Query: 533 acgacgact 541 |||| |||| Sbjct: 137842 acgaggact 137850
>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH015H17, complete sequence Length = 110885 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 374 tccccgtcctcgtctacttccacggcggcggcttcac 410 ||||||| ||||||| ||||||||||||| ||||||| Sbjct: 95792 tccccgttctcgtcttcttccacggcggcagcttcac 95828
>ref|XM_359910.1| Magnaporthe grisea 70-15 hypothetical protein (MG04867.4) partial mRNA Length = 1110 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 494 actaccgcctcgcgcccgagcacc 517 |||||||||||||||||||||||| Sbjct: 479 actaccgcctcgcgcccgagcacc 502
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 485 tctccgtcaactaccgcctcgcgcccgagcac 516 |||| ||| ||||||||||||||||||||||| Sbjct: 4725824 tctcggtcgactaccgcctcgcgcccgagcac 4725793
>dbj|AK071569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102G04, full insert sequence Length = 1519 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcg 403 |||||||||| |||||| |||||||||||||| Sbjct: 465 gctccccgtcgtcgtcttcttccacggcggcg 496
>dbj|AK070294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050O07, full insert sequence Length = 1333 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcg 403 |||||||||| |||||| |||||||||||||| Sbjct: 462 gctccccgtcgtcgtcttcttccacggcggcg 493
>ref|XM_479518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 ||||| || |||||||||||||||| |||||| || ||| |||||||||| Sbjct: 512 tctccctcgactaccgcctcgcgcctgagcactgcctccccgccgcctacg 562
>ref|NM_186423.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1365 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 382 ctcgtctacttccacggcggcgg 404 ||||||||||||||||||||||| Sbjct: 343 ctcgtctacttccacggcggcgg 365 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 taccgcctcgcgcccgagcaccgc 519 ||||||||||| |||||||||||| Sbjct: 457 taccgcctcgcccccgagcaccgc 480
>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06, complete sequence Length = 142659 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 474 cgccgtggtcgtctccgtcaactaccg 500 |||||| |||||||||||||||||||| Sbjct: 90556 cgccgttgtcgtctccgtcaactaccg 90530
>ref|XM_366222.1| Magnaporthe grisea 70-15 hypothetical protein (MG10441.4) partial mRNA Length = 1014 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 384 cgtctacttccacggcggcggct 406 ||||||||||||||||||||||| Sbjct: 306 cgtctacttccacggcggcggct 328
>ref|XM_957884.1| Neurospora crassa OR74A hypothetical protein (NCU07597.1) partial mRNA Length = 1353 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 386 tctacttccacggcggcggcttc 408 ||||||||||||||||||||||| Sbjct: 509 tctacttccacggcggcggcttc 531
>ref|XM_328302.1| Neurospora crassa OR74A hypothetical protein (NCU07597.1) partial mRNA Length = 1353 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 386 tctacttccacggcggcggcttc 408 ||||||||||||||||||||||| Sbjct: 509 tctacttccacggcggcggcttc 531
>gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029P13, complete sequence Length = 158506 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 340 tcccctgcggcggcggcggccgg 362 ||||||||||||||||||||||| Sbjct: 113032 tcccctgcggcggcggcggccgg 113010
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 ||||| || |||||||||||||||| |||||| || ||| |||||||||| Sbjct: 106410 tctccctcgactaccgcctcgcgcctgagcactgcctccccgccgcctacg 106360 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 |||||| ||| | ||||||||||||||||| |||||| Sbjct: 106523 gctccctgtcattgtctacttccacggcggtggcttc 106487
>dbj|AK110810.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-F04, full insert sequence Length = 1366 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 382 ctcgtctacttccacggcggcgg 404 ||||||||||||||||||||||| Sbjct: 343 ctcgtctacttccacggcggcgg 365 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 taccgcctcgcgcccgagcaccgc 519 ||||||||||| |||||||||||| Sbjct: 457 taccgcctcgcccccgagcaccgc 480
>dbj|AK066139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054P13, full insert sequence Length = 1314 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 383 tcgtctacttccacggcggcggc 405 ||||||||||||||||||||||| Sbjct: 326 tcgtctacttccacggcggcggc 348
>dbj|AK062676.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G12, full insert sequence Length = 1229 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 494 actaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 ||||||||||||| || ||||| | | ||||||||||||||||||| Sbjct: 432 actaccgcctcgccccggagcagcccgtcccggccgcctacgacgac 478
>dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1409_C08 Length = 90673 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacg 535 ||||| || |||||||||||||||| |||||| || ||| |||||||||| Sbjct: 15622 tctccctcgactaccgcctcgcgcctgagcactgcctccccgccgcctacg 15572 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 372 gctccccgtcctcgtctacttccacggcggcggcttc 408 |||||| ||| | ||||||||||||||||| |||||| Sbjct: 15735 gctccctgtcattgtctacttccacggcggtggcttc 15699
>gb|AC139241.4| Mus musculus BAC clone RP24-79L4 from 3, complete sequence Length = 200361 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 45 gagtgagtcagtgagtcagtgag 67 ||||||||||||||||||||||| Sbjct: 145885 gagtgagtcagtgagtcagtgag 145863
>ref|NM_114729.2| Arabidopsis thaliana catalytic AT3G48700 mRNA, complete cds Length = 1229 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 tcctcgtctacttccacggcgg 401 |||||||||||||||||||||| Sbjct: 289 tcctcgtctacttccacggcgg 310
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 382 ctcgtctacttccacggcggcggcttcacg 411 |||||||||| ||| ||||||||||||||| Sbjct: 2243540 ctcgtctactaccatggcggcggcttcacg 2243511 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 catcgcgcagcgccgcgacgg 209 ||||||||||||||||||||| Sbjct: 2145754 catcgcgcagcgccgcgacgg 2145774 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 catcgcgcagcgccgcgacg 208 |||||||||||||||||||| Sbjct: 1617756 catcgcgcagcgccgcgacg 1617737
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 163 ctgttcgcgctcgtcaccacca 184 |||||||||||||||||||||| Sbjct: 2626859 ctgttcgcgctcgtcaccacca 2626880
>emb|AL133315.1|ATT8P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T8P19 Length = 96679 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 380 tcctcgtctacttccacggcgg 401 |||||||||||||||||||||| Sbjct: 75143 tcctcgtctacttccacggcgg 75122
>gb|AC105917.5| Homo sapiens BAC clone RP11-395C17 from 4, complete sequence Length = 191323 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 46 agtgagtcagtgagtcagtgag 67 |||||||||||||||||||||| Sbjct: 23263 agtgagtcagtgagtcagtgag 23242 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 agtgagtcagtgagtcagtg 65 |||||||||||||||||||| Sbjct: 23255 agtgagtcagtgagtcagtg 23236
>gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bin: 5.00, complete sequence Length = 50000 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 494 actaccgcctcgcgcccgagcaccgc 519 |||||||||||||||| ||||||||| Sbjct: 18108 actaccgcctcgcgccggagcaccgc 18083 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 376 cccgtcctcgtctacttccacggcggcgg 404 ||||| || |||||||||||||||||||| Sbjct: 18226 cccgtgctggtctacttccacggcggcgg 18198
>gb|BT005425.1| Arabidopsis thaliana clone U51195 unknown protein (At3g48700) mRNA, complete cds Length = 1021 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 tcctcgtctacttccacggcgg 401 |||||||||||||||||||||| Sbjct: 227 tcctcgtctacttccacggcgg 248
>gb|AE004826.1| Pseudomonas aeruginosa PAO1, section 387 of 529 of the complete genome Length = 10458 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 gccgccggcgctgccgtggtcg 150 |||||||||||||||||||||| Sbjct: 4047 gccgccggcgctgccgtggtcg 4026
>gb|AY496577.1| Uncultured bacterium clone pELP11B oxidoreductase gene, partial cds; and lipase/esterase gene, complete cds Length = 1562 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 actaccgcctcgcgcccgagca 515 |||||||||||||||||||||| Sbjct: 923 actaccgcctcgcgcccgagca 944
>gb|AY496576.1| Uncultured bacterium clone pELP45 oxidoreductase gene, partial cds; and lipase/esterase gene, complete cds Length = 1325 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 494 actaccgcctcgcgcccgagca 515 |||||||||||||||||||||| Sbjct: 686 actaccgcctcgcgcccgagca 707
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 171 gctcgtcaccaccaacgacatc 192 |||||||||||||||||||||| Sbjct: 46114 gctcgtcaccaccaacgacatc 46093
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 488 ccgtcaactaccgcctcgcgcccgagcacc 517 |||||||||||||||| ||||| ||||||| Sbjct: 79655 ccgtcaactaccgcctagcgccagagcacc 79684
>dbj|AK118967.1| Arabidopsis thaliana At3g48700 mRNA for unknown protein, complete cds, clone: RAFL21-30-D12 Length = 1233 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 tcctcgtctacttccacggcgg 401 |||||||||||||||||||||| Sbjct: 289 tcctcgtctacttccacggcgg 310
>dbj|AK102328.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090L22, full insert sequence Length = 1654 Score = 44.1 bits (22), Expect = 0.53 Identities = 45/50 (90%), Gaps = 2/50 (4%) Strand = Plus / Plus Query: 493 aactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgact 541 ||||||||||||||||| ||||| ||||| |||||| || |||||||||| Sbjct: 535 aactaccgcctcgcgccggagcacccgct-cccggcagcgtacgacgact 583
>dbj|AK067243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099C01, full insert sequence Length = 3592 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 171 gctcgtcaccaccaacgacatc 192 |||||||||||||||||||||| Sbjct: 2765 gctcgtcaccaccaacgacatc 2744
>dbj|AK063400.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-A02, full insert sequence Length = 1245 Score = 44.1 bits (22), Expect = 0.53 Identities = 45/50 (90%), Gaps = 2/50 (4%) Strand = Plus / Plus Query: 493 aactaccgcctcgcgcccgagca-ccgctacccggccgcctacgacgact 541 ||||||||||||||||| ||||| ||||| |||||| || |||||||||| Sbjct: 537 aactaccgcctcgcgccggagcacccgct-cccggcagcgtacgacgact 585
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 382 ctcgtctacttccacggcggcggcttcacg 411 |||||||||| |||||||||||||||||| Sbjct: 2428167 ctcgtctactatcacggcggcggcttcacg 2428196 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 agcgcgcggcccgcgccgccg 135 ||||||||||||||||||||| Sbjct: 2040722 agcgcgcggcccgcgccgccg 2040742
>ref|NM_001001555.1| Homo sapiens growth factor receptor-bound protein 10 (GRB10), transcript variant 4, mRNA Length = 5043 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 cccgcgccgccggcgctgccg 144 ||||||||||||||||||||| Sbjct: 123 cccgcgccgccggcgctgccg 103
>ref|NM_184424.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1232 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 ctcgtctacttccacggcggcggct 406 ||||||| ||||||||||||||||| Sbjct: 279 ctcgtctgcttccacggcggcggct 303 Score = 40.1 bits (20), Expect = 8.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||| | |||||||||||| |||||||||||| ||| |||||| ||||||| Sbjct: 382 tctccgccgactaccgcctcggccccgagcaccgcctccccgccgccatcgacgac 437
>gb|AC167815.3| Mus musculus BAC clone RP23-463H10 from chromosome 5, complete sequence Length = 198336 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 344 ctgcggcggcggcggccgggc 364 ||||||||||||||||||||| Sbjct: 55670 ctgcggcggcggcggccgggc 55650
>ref|XM_478476.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1621 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||| |||||| | |||||||||||||| ||||||| Sbjct: 403 gtcgtgtccgtcgagtaccgcctcgcgccggagcacc 439
>ref|XM_478255.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1347 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||||||||| | |||||||||||||| ||||||| Sbjct: 388 gtcgtctccgtggagtaccgcctcgcgccggagcacc 424
>gb|AC007818.8| Drosophila melanogaster clone BACR02M05, complete sequence Length = 188549 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 ggagtgagtcagtgagtcagtgagc 68 ||||||||||||||||| ||||||| Sbjct: 145883 ggagtgagtcagtgagtgagtgagc 145907
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 tctacttccacggcggcggcttcac 410 ||||||||||||||||||| ||||| Sbjct: 80696 tctacttccacggcggcggtttcac 80720
>ref|XM_364823.1| Magnaporthe grisea 70-15 hypothetical protein (MG09668.4) partial mRNA Length = 1605 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 tcctcgtctacttccacggcggcggcttc 408 ||||||||| ||||||||||||| ||||| Sbjct: 458 tcctcgtcttcttccacggcggccgcttc 486
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 cgcggcccgcgccgccggcgc 139 ||||||||||||||||||||| Sbjct: 1611429 cgcggcccgcgccgccggcgc 1611449
>gb|AE009402.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 172 of 187 of the complete sequence Length = 11742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcggcccgcgccgccggcgct 140 ||||||||||||||||||||| Sbjct: 9038 gcggcccgcgccgccggcgct 9018
>gb|AE008211.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 15 of 187 of the complete sequence Length = 10582 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 gcggcccgcgccgccggcgct 140 ||||||||||||||||||||| Sbjct: 10004 gcggcccgcgccgccggcgct 10024
>gb|AC138679.10| Mus musculus chromosome 5, clone RP23-177I4, complete sequence Length = 230184 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 ctgcggcggcggcggccgggc 364 ||||||||||||||||||||| Sbjct: 64521 ctgcggcggcggcggccgggc 64541
>ref|XM_993726.1| PREDICTED: Mus musculus expressed sequence AA474455 (AA474455), mRNA Length = 5667 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 ctgcggcggcggcggccgggc 364 ||||||||||||||||||||| Sbjct: 21 ctgcggcggcggcggccgggc 41
>ref|XM_132031.6| PREDICTED: Mus musculus expressed sequence AA474455 (AA474455), mRNA Length = 5667 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 ctgcggcggcggcggccgggc 364 ||||||||||||||||||||| Sbjct: 21 ctgcggcggcggcggccgggc 41
>ref|XM_910906.2| PREDICTED: Mus musculus expressed sequence AA474455 (AA474455), mRNA Length = 5667 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 ctgcggcggcggcggccgggc 364 ||||||||||||||||||||| Sbjct: 21 ctgcggcggcggcggccgggc 41
>emb|CR974455.5| Mouse DNA sequence from clone RP24-65D22 on chromosome 2, complete sequence Length = 193651 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ccacacaatttaacacgggag 44 ||||||||||||||||||||| Sbjct: 136028 ccacacaatttaacacgggag 136008
>gb|AC004920.2| Homo sapiens PAC clone RP5-898O18 from 7, complete sequence Length = 103421 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 cccgcgccgccggcgctgccg 144 ||||||||||||||||||||| Sbjct: 52976 cccgcgccgccggcgctgccg 52996
>ref|XM_535411.2| PREDICTED: Canis familiaris similar to 6-phosphogluconate dehydrogenase, decarboxylating, transcript variant 1 (LOC478236), mRNA Length = 1933 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 gcggcggcggcggccgggcag 366 ||||||||||||||||||||| Sbjct: 54 gcggcggcggcggccgggcag 34
>ref|XM_860484.1| PREDICTED: Canis familiaris similar to 6-phosphogluconate dehydrogenase, decarboxylating, transcript variant 2 (LOC478236), mRNA Length = 641 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 gcggcggcggcggccgggcag 366 ||||||||||||||||||||| Sbjct: 38 gcggcggcggcggccgggcag 18
>gb|AC145394.1| Pan troglodytes BAC clone RP43-83L19 from 7, complete sequence Length = 144147 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 cccgcgccgccggcgctgccg 144 ||||||||||||||||||||| Sbjct: 12848 cccgcgccgccggcgctgccg 12868
>gb|AC175804.3| Sorex araneus clone SA_Ba-385M9, complete sequence Length = 33298 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 gcggcggcggcggccgggcag 366 ||||||||||||||||||||| Sbjct: 16072 gcggcggcggcggccgggcag 16052
>emb|AL445209.4| Human DNA sequence from clone RP11-52L5 on chromosome 13 Contains a transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene, a novel gene, the POU4F1 gene for POU domain, class 4, transcription factor 1 (BRN3A, RDC-1), the 3' end a novel gene (contains FLJ13449, possible ortholog of mouse 2810449K13Rik protein) and 3 CpG islands, complete sequence Length = 157302 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 gcggcggcggcggccgggcag 366 ||||||||||||||||||||| Sbjct: 119200 gcggcggcggcggccgggcag 119180
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 cgcggcccgcgccgccggcgc 139 ||||||||||||||||||||| Sbjct: 863585 cgcggcccgcgccgccggcgc 863605
>emb|AL121782.9|HSJ585I14 Human DNA sequence from clone RP4-585I14 on chromosome 20 Contains the 3' end of the C20orf13 gene for chromosome 20 open reading frame 13 and the GAPDP2 gene for glyceraldehyde-3-phosphate dehydrogenase pseudogene 2, complete sequence Length = 144781 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 agtgagtcagtgagtcagtga 66 ||||||||||||||||||||| Sbjct: 139910 agtgagtcagtgagtcagtga 139890
>ref|XM_789138.1| PREDICTED: Strongylocentrotus purpuratus similar to Acetylcholinesterase precursor (AChE) (LOC589500), mRNA Length = 1986 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcg 505 |||||| |||||||||||||||||| Sbjct: 487 gtcgtcgccgtcaactaccgcctcg 511
>emb|X64624.1|HSRDC1MR H.sapiens mRNA for RDC-1 POU domain containing protein Length = 3492 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 gcggcggcggcggccgggcag 366 ||||||||||||||||||||| Sbjct: 719 gcggcggcggcggccgggcag 739
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cccgtcctcgtctacttccacggcggcggcttc 408 |||||| || |||| |||||||||||||||||| Sbjct: 4121485 cccgtcgtcctctatttccacggcggcggcttc 4121453
>emb|BX842646.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 1/11 Length = 349761 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 cccctgcggcggcggcggccg 361 ||||||||||||||||||||| Sbjct: 101194 cccctgcggcggcggcggccg 101174
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 cgcggcccgcgccgccggcgc 139 ||||||||||||||||||||| Sbjct: 2946753 cgcggcccgcgccgccggcgc 2946773
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 acggcggcggcttcacgctgc 415 ||||||||||||||||||||| Sbjct: 985965 acggcggcggcttcacgctgc 985985 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 gggcgccggcgacaatagcgcgcg 122 ||||||||||||||| |||||||| Sbjct: 3172017 gggcgccggcgacaacagcgcgcg 3172040
>emb|CR624299.1| full-length cDNA clone CS0DJ012YC17 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 2289 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 cccgcgccgccggcgctgccg 144 ||||||||||||||||||||| Sbjct: 98 cccgcgccgccggcgctgccg 78
>gb|AC025198.12| Homo sapiens chromosome 17, clone RP11-766H1, complete sequence Length = 198524 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 gtgagtcagtgagtcagtgag 67 ||||||||||||||||||||| Sbjct: 51921 gtgagtcagtgagtcagtgag 51901
>gb|AC083813.29| Homo sapiens 12q BAC RP11-304C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216123 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gagtgagtcagtgagtcagtg 65 ||||||||||||||||||||| Sbjct: 52992 gagtgagtcagtgagtcagtg 52972
>gb|AC145871.4| Pan troglodytes BAC clone RP43-6N15 from chromosome 7, complete sequence Length = 230197 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 cccgcgccgccggcgctgccg 144 ||||||||||||||||||||| Sbjct: 22632 cccgcgccgccggcgctgccg 22612
>gb|AC008217.5|AC008217 Drosophila melanogaster, chromosome 3R, region 98B-98B, BAC clone BACR10J03, complete sequence Length = 193245 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 ggagtgagtcagtgagtcagtgagc 68 ||||||||||||||||| ||||||| Sbjct: 88606 ggagtgagtcagtgagtgagtgagc 88630
>gb|AC008253.8|AC008253 Drosophila melanogaster, chromosome 3R, region 98B1-98B2, BAC clone BACR48A16, complete sequence Length = 180887 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 ggagtgagtcagtgagtcagtgagc 68 ||||||||||||||||| ||||||| Sbjct: 57344 ggagtgagtcagtgagtgagtgagc 57368
>gb|AC013280.6| Homo sapiens BAC clone RP11-519F14 from 2, complete sequence Length = 175047 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gagtgagtcagtgagtcagtg 65 ||||||||||||||||||||| Sbjct: 147763 gagtgagtcagtgagtcagtg 147743
>gb|AC104326.20| Mus musculus strain C57BL/6J chromosome 2 clone rp23-20g17, complete sequence Length = 232241 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ccacacaatttaacacgggag 44 ||||||||||||||||||||| Sbjct: 172611 ccacacaatttaacacgggag 172591
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 cgcggcccgcgccgccggcgc 139 ||||||||||||||||||||| Sbjct: 2635469 cgcggcccgcgccgccggcgc 2635449 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 cgccgacgtcaccgtcgacg 310 |||||||||||||||||||| Sbjct: 3925293 cgccgacgtcaccgtcgacg 3925312
>ref|XM_341372.2| PREDICTED: Rattus norvegicus POU domain, class 4, transcription factor 1 (Pou4f1), mRNA Length = 2589 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 gcggcggcggcggccgggcag 366 ||||||||||||||||||||| Sbjct: 971 gcggcggcggcggccgggcag 991
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 116 gcgcgcggcccgcgccgccggcgctgccg 144 |||||||||||||||||||| ||| |||| Sbjct: 593472 gcgcgcggcccgcgccgccgccgccgccg 593444 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gcggcccgcgccgccggcgc 139 |||||||||||||||||||| Sbjct: 4990387 gcggcccgcgccgccggcgc 4990406 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gcgcgcggcccgcgccgccg 135 |||||||||||||||||||| Sbjct: 4354242 gcgcgcggcccgcgccgccg 4354261
>emb|AL928868.5| Mouse DNA sequence from clone RP23-428O15 on chromosome 2, complete sequence Length = 146169 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ccacacaatttaacacgggag 44 ||||||||||||||||||||| Sbjct: 43126 ccacacaatttaacacgggag 43106
>dbj|AP005767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0035G04 Length = 155636 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 tcccctgcggcggcggcggcc 360 ||||||||||||||||||||| Sbjct: 115258 tcccctgcggcggcggcggcc 115278
>dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1112_F06 Length = 104419 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||||||||| | |||||||||||||| ||||||| Sbjct: 40436 gtcgtctccgtggagtaccgcctcgcgccggagcacc 40472
>ref|XM_317325.2| Anopheles gambiae str. PEST ENSANGP00000006861 (ENSANGG00000005165), partial mRNA Length = 1230 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 cgcttcctcttctccttcggc 240 ||||||||||||||||||||| Sbjct: 1100 cgcttcctcttctccttcggc 1080
>dbj|AK110244.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-G09, full insert sequence Length = 3543 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 tctacttccacggcggcggct 406 ||||||||||||||||||||| Sbjct: 972 tctacttccacggcggcggct 992
>dbj|AK109058.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E12, full insert sequence Length = 1621 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccgcctcgcgcccgagcacc 517 ||||| |||||| | |||||||||||||| ||||||| Sbjct: 403 gtcgtgtccgtcgagtaccgcctcgcgccggagcacc 439
>dbj|AK073659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033053C20, full insert sequence Length = 1231 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 ctcgtctacttccacggcggcggct 406 ||||||| ||||||||||||||||| Sbjct: 278 ctcgtctgcttccacggcggcggct 302 Score = 40.1 bits (20), Expect = 8.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||| | |||||||||||| |||||||||||| ||| |||||| ||||||| Sbjct: 381 tctccgccgactaccgcctcggccccgagcaccgcctccccgccgccatcgacgac 436
>dbj|AK060305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-A09, full insert sequence Length = 1274 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 ctcgtctacttccacggcggcggct 406 ||||||| ||||||||||||||||| Sbjct: 277 ctcgtctgcttccacggcggcggct 301 Score = 40.1 bits (20), Expect = 8.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 485 tctccgtcaactaccgcctcgcgcccgagcaccgctacccggccgcctacgacgac 540 |||||| | |||||||||||| |||||||||||| ||| |||||| ||||||| Sbjct: 380 tctccgccgactaccgcctcggccccgagcaccgcctccccgccgccatcgacgac 435
>gb|AE003762.4| Drosophila melanogaster chromosome 3R, section 100 of 118 of the complete sequence Length = 231486 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 ggagtgagtcagtgagtcagtgagc 68 ||||||||||||||||| ||||||| Sbjct: 118284 ggagtgagtcagtgagtgagtgagc 118308
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 tacttccacggcggcggcttc 408 ||||||||||||||||||||| Sbjct: 2591208 tacttccacggcggcggcttc 2591188
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 494 actaccgcctcgcgcccgagcaccgctacccggccgc 530 ||||||| || || |||||||||| |||||||||||| Sbjct: 3992774 actaccggctggcccccgagcacccctacccggccgc 3992810 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 368 ccccgctccccgtcctcgtctacttccacggcggcggcttc 408 |||||||||||||| |||| ||| ||||||||| |||||| Sbjct: 1578969 ccccgctccccgtcgtcgtgtacgcccacggcggtggcttc 1578929
>gb|AC131803.3| Mus musculus BAC clone RP24-549I15 from chromosome 5, complete sequence Length = 168439 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 344 ctgcggcggcggcggccgggc 364 ||||||||||||||||||||| Sbjct: 143758 ctgcggcggcggcggccgggc 143738
>gb|AC140790.3| Gallus gallus BAC clone TAM32-50D18 from chromosome ul, complete sequence Length = 176981 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 396 cggcggcggcttcacgctgctctccgctgcctc 428 ||||||| ||| | ||||||||||||||||||| Sbjct: 106936 cggcggctgctccgcgctgctctccgctgcctc 106968
>emb|AJ584609.1| Bdellovibrio bacteriovorus putative pilus encoding gene cluster, strain DSM50701 (HD100) Length = 11332 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cccctgcggcggcggcggccg 361 ||||||||||||||||||||| Sbjct: 5647 cccctgcggcggcggcggccg 5667
>gb|AY500152.1| Mycobacteriophage U2, complete genome Length = 51277 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 cgcggcccgcgccgccggcgc 139 ||||||||||||||||||||| Sbjct: 49921 cgcggcccgcgccgccggcgc 49941
>gb|U10063.1|HSBRN3A02 Human POU daomain factor (Brn-3a) gene, exon 2, complete cds Length = 1149 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 gcggcggcggcggccgggcag 366 ||||||||||||||||||||| Sbjct: 586 gcggcggcggcggccgggcag 606
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 gcttctgccgcgagctgggc 474 |||||||||||||||||||| Sbjct: 3191411 gcttctgccgcgagctgggc 3191430
>gb|AC167720.2| Mus musculus BAC clone RP24-216G15 from chromosome 16, complete sequence Length = 172721 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 ggagtgagtcagtgagtcagtgag 67 ||||||||| |||||||||||||| Sbjct: 171632 ggagtgagtgagtgagtcagtgag 171609
>ref|XM_482927.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1228 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 372 gctccccgtcctcgtctacttccacggcggcg 403 |||||| || ||| |||||||||||||||||| Sbjct: 353 gctcccggtgctcatctacttccacggcggcg 384
>ref|XM_481590.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1266 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cccgcgccgccggcgctgcc 143 |||||||||||||||||||| Sbjct: 848 cccgcgccgccggcgctgcc 867
>ref|XM_476120.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 675 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ccctgcggcggcggcggccg 361 |||||||||||||||||||| Sbjct: 501 ccctgcggcggcggcggccg 482
>ref|XM_475742.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 588 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gcggcggcggcggccgggca 365 |||||||||||||||||||| Sbjct: 560 gcggcggcggcggccgggca 541
>ref|XM_465029.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1200 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcccctgcggcggcggcggc 359 |||||||||||||||||||| Sbjct: 115 tcccctgcggcggcggcggc 134
>ref|NM_185740.1| Oryza sativa (japonica cultivar-group), mRNA Length = 774 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 catcgacggcatgtgccgcc 454 |||||||||||||||||||| Sbjct: 317 catcgacggcatgtgccgcc 336
>ref|XM_478470.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1320 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 472 ggcgccgtggtcgtctccgtcaactaccgcctcgcgcccgagca 515 |||||| | ||||| |||||| | |||||||||||||| ||||| Sbjct: 367 ggcgccctcgtcgtgtccgtcgagtaccgcctcgcgccggagca 410
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 acttccacggcggcggcttc 408 |||||||||||||||||||| Sbjct: 918573 acttccacggcggcggcttc 918554
>gb|AY022832.1| Oryza sativa microsatellite MRG5157 containing (CGC)X10, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gcgcggcccgcgccgccggc 137 |||||||||||||||||||| Sbjct: 135 gcgcggcccgcgccgccggc 154
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gcgcggcccgcgccgccggc 137 |||||||||||||||||||| Sbjct: 101325 gcgcggcccgcgccgccggc 101344
>ref|XM_361298.1| Magnaporthe grisea 70-15 hypothetical protein (MG03772.4) partial mRNA Length = 2097 Score = 40.1 bits (20), Expect = 8.3 Identities = 34/38 (89%), Gaps = 3/38 (7%) Strand = Plus / Plus Query: 471 gggcgccgtggtcgtct---ccgtcaactaccgcctcg 505 ||||| ||||||||||| |||||||||||||||||| Sbjct: 825 gggcgacgtggtcgtcttttccgtcaactaccgcctcg 862
>ref|XM_367739.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07650.4) partial mRNA Length = 1545 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cttccacggcggcggcttca 409 |||||||||||||||||||| Sbjct: 768 cttccacggcggcggcttca 787
>ref|NM_001031680.1| Homo sapiens runt-related transcription factor 3 (RUNX3), transcript variant 1, mRNA Length = 2641 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcccctgcggcggcggcggc 359 |||||||||||||||||||| Sbjct: 347 tcccctgcggcggcggcggc 366
>ref|NM_019732.2| Mus musculus runt related transcription factor 3 (Runx3), mRNA Length = 3891 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcccctgcggcggcggcggc 359 |||||||||||||||||||| Sbjct: 562 tcccctgcggcggcggcggc 581
>ref|NM_004350.1| Homo sapiens runt-related transcription factor 3 (RUNX3), transcript variant 2, mRNA Length = 3809 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcccctgcggcggcggcggc 359 |||||||||||||||||||| Sbjct: 68 tcccctgcggcggcggcggc 87
>ref|XM_954921.1| Neurospora crassa OR74A hypothetical protein (NCU06152.1) partial mRNA Length = 1191 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cttccacggcggcggcttca 409 |||||||||||||||||||| Sbjct: 420 cttccacggcggcggcttca 439
>ref|XM_955253.1| Neurospora crassa OR74A hypothetical protein (NCU07081.1) partial mRNA Length = 1116 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 tcgtctacttccacggcggcggcttcac 410 ||||| ||||||||||||| |||||||| Sbjct: 332 tcgtcaacttccacggcggtggcttcac 359
>ref|XM_326006.1| Neurospora crassa OR74A hypothetical protein (NCU06152.1) partial mRNA Length = 1191 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cttccacggcggcggcttca 409 |||||||||||||||||||| Sbjct: 420 cttccacggcggcggcttca 439
>ref|XM_327366.1| Neurospora crassa OR74A hypothetical protein (NCU07081.1) partial mRNA Length = 1116 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 tcgtctacttccacggcggcggcttcac 410 ||||| ||||||||||||| |||||||| Sbjct: 332 tcgtcaacttccacggcggtggcttcac 359
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gcggcggcggcggccgggca 365 |||||||||||||||||||| Sbjct: 16782 gcggcggcggcggccgggca 16763
>gb|AF155880.1| Mus musculus transcription factor AML2/CBFA3 (Cbfa3) mRNA, complete cds Length = 1855 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcccctgcggcggcggcggc 359 |||||||||||||||||||| Sbjct: 335 tcccctgcggcggcggcggc 354
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ccctgcggcggcggcggccg 361 |||||||||||||||||||| Sbjct: 97984 ccctgcggcggcggcggccg 97965
>gb|AE009226.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 252 of 256 of the complete sequence Length = 7892 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 cgcgacgggaccgtaaaccgcttc 225 |||||||||||| ||||||||||| Sbjct: 7768 cgcgacgggaccttaaaccgcttc 7745
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gcggcggcggcggccgggca 365 |||||||||||||||||||| Sbjct: 83074 gcggcggcggcggccgggca 83055
>gb|AC092689.2| Homo sapiens BAC clone RP11-809G18 from 7, complete sequence Length = 27846 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gagtgagtcagtgagtcagtgagc 68 |||||||||||||||| ||||||| Sbjct: 14053 gagtgagtcagtgagtgagtgagc 14076
>gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genomic sequence, complete sequence Length = 167427 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ccgcgccgccggcgctgccg 144 |||||||||||||||||||| Sbjct: 125921 ccgcgccgccggcgctgccg 125940
>ref|XM_543351.2| PREDICTED: Canis familiaris similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 (LOC486226), mRNA Length = 1896 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 gcggcggcggcggccgggcagacc 369 |||||||||||||||| ||||||| Sbjct: 177 gcggcggcggcggccgcgcagacc 200
>ref|XM_543001.2| PREDICTED: Canis familiaris similar to elastin microfibril interfacer 3 (LOC485877), mRNA Length = 2310 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cgcgcggcccgcgccgccgg 136 |||||||||||||||||||| Sbjct: 81 cgcgcggcccgcgccgccgg 100
>emb|AJ878740.1| Stenotrophomonas rhizophila ggpS gene for glucosylglycerol-phosphate synthase, strain DSM 14405 Length = 2298 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ggcccgcgccgccggcgctg 141 |||||||||||||||||||| Sbjct: 813 ggcccgcgccgccggcgctg 832
>gb|AC131769.3| Mus musculus BAC clone RP24-290G2 from chromosome 3, complete sequence Length = 148675 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 tcagtgagtcagtgagccatggag 75 ||||||||||| |||||||||||| Sbjct: 130536 tcagtgagtcactgagccatggag 130513
>gb|BC013362.2| Homo sapiens runt-related transcription factor 3, transcript variant 1, mRNA (cDNA clone MGC:16070 IMAGE:3615873), complete cds Length = 2641 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcccctgcggcggcggcggc 359 |||||||||||||||||||| Sbjct: 347 tcccctgcggcggcggcggc 366
>emb|AL731718.30| Mouse DNA sequence from clone RP23-167O21 on chromosome 4, complete sequence Length = 133646 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcccctgcggcggcggcggc 359 |||||||||||||||||||| Sbjct: 93198 tcccctgcggcggcggcggc 93217
>gb|AC139853.17| Medicago truncatula clone mth2-13d20, complete sequence Length = 93375 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 gtcgtctccgtcaactaccg 500 |||||||||||||||||||| Sbjct: 58630 gtcgtctccgtcaactaccg 58649
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 tccgccgacgtcaccgtcgacgcc 312 |||| ||||||||||||||||||| Sbjct: 1905872 tccgacgacgtcaccgtcgacgcc 1905895
>emb|AL359085.14| Human DNA sequence from clone RP11-113J24 on chromosome 13 Contains the 5' end of a novel gene, a novel gene (FLJ14624 FLJ31847), the 5' end of a novel gene (FLJ22153), COX5B (cytochrome c oxidase subunit Vb) pseudogene and two CpG islands, complete sequence Length = 152794 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 agtgagtcagtgagtcagtg 65 |||||||||||||||||||| Sbjct: 123419 agtgagtcagtgagtcagtg 123438
>emb|AL023096.1|HS398I9 Human DNA sequence from clone RP3-398I9 on chromosome 1p34.3-36.13 Contains the 3' end of the RUNX3 gene for runt-related transcription factor 3 and a CpG island, complete sequence Length = 95241 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 tcccctgcggcggcggcggc 359 |||||||||||||||||||| Sbjct: 64860 tcccctgcggcggcggcggc 64841
>emb|Z35278.1|HSAML1RN H.sapiens PEBP2aC1 acute myeloid leukaemia mRNA Length = 3809 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcccctgcggcggcggcggc 359 |||||||||||||||||||| Sbjct: 68 tcccctgcggcggcggcggc 87
>emb|X79550.2|HSAML2 Homo sapiens AML2 mRNA Length = 1806 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcccctgcggcggcggcggc 359 |||||||||||||||||||| Sbjct: 65 tcccctgcggcggcggcggc 84
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 503 tcgcgcccgagcaccgctacccggccgc 530 |||||||||| |||||||||||||||| Sbjct: 165044 tcgcgcccgaagaccgctacccggccgc 165017
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 ccggccgcctacgacgactg 542 |||||||||||||||||||| Sbjct: 126606 ccggccgcctacgacgactg 126587
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 503 tcgcgcccgagcaccgctacccggccgc 530 |||||||||| |||||||||||||||| Sbjct: 84249 tcgcgcccgaagaccgctacccggccgc 84222
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 ccggccgcctacgacgactg 542 |||||||||||||||||||| Sbjct: 37505 ccggccgcctacgacgactg 37486 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,351,233 Number of Sequences: 3902068 Number of extensions: 4351233 Number of successful extensions: 264603 Number of sequences better than 10.0: 326 Number of HSP's better than 10.0 without gapping: 344 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 240334 Number of HSP's gapped (non-prelim): 24246 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)