ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart33d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT008921.1| Triticum aestivum clone wyr1c.pk002.o12:fis, full... 502 e-139
2ref|XM_479756.1| Oryza sativa (japonica cultivar-group), mRNA 157 3e-35
3ref|XM_507097.1| PREDICTED Oryza sativa (japonica cultivar-group... 157 3e-35
4dbj|AB110164.1| Oryza sativa (japonica cultivar-group) mRNA for ... 157 3e-35
5gb|AF429947.1| Oryza sativa putative fructokinase II mRNA, compl... 157 3e-35
6dbj|AK099353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 3e-35
7dbj|AK070120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 3e-35
8dbj|AK061391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 3e-35
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
10dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
11gb|BT016469.1| Zea mays clone Contig302 mRNA sequence 113 4e-22
12gb|AY197773.1| Zea mays fructokinase 2 (frk2) mRNA, complete cds 113 4e-22
13gb|AY112523.1| Zea mays CL966_1 mRNA sequence 113 4e-22
14emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 46 0.087
15gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynth... 44 0.34
16gb|AF457962.1| Zea mays clone csi1n.pk0029.c8, mRNA sequence 44 0.34
17emb|AL132709.5|CNS01DTB Human chromosome 14 DNA sequence BAC R-9... 44 0.34
18gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.4
19ref|XM_868360.1| PREDICTED: Bos taurus similar to 5-hydroxytrypt... 42 1.4
20gb|AY344643.1| Cavia porcellus serotonin receptor (5HT1E) mRNA, ... 42 1.4
21gb|AY197772.1| Zea mays fructokinase 1 (frk1) mRNA, complete cds 42 1.4
22gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complet... 42 1.4
23dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 42 1.4
24gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.4
25gb|AC147565.4| Mus musculus BAC clone RP23-116P18 from 9, comple... 42 1.4
26ref|NM_102811.1| Arabidopsis thaliana unknown protein AT1G30750 ... 40 5.4
27ref|NM_196736.1| Oryza sativa (japonica cultivar-group) hypothet... 40 5.4
28ref|NM_193931.1| Oryza sativa (japonica cultivar-group), predic... 40 5.4
29ref|XM_361361.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 5.4
30gb|BC003324.1| Mus musculus cDNA sequence BC003324, mRNA (cDNA c... 40 5.4
31ref|NM_030259.1| Mus musculus cDNA sequence BC003324 (BC003324),... 40 5.4
32gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosom... 40 5.4
33gb|BT012972.1| Lycopersicon esculentum clone 114182R, mRNA sequence 40 5.4
34emb|AJ251914.1|SSC251914 Sus scrofa MHC class I SLA genes, haplo... 40 5.4
35gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, comple... 40 5.4
36emb|AL356632.12| Human DNA sequence from clone RP11-7D5 on chrom... 40 5.4
37emb|AL138889.9| Human DNA sequence from clone RP3-468B3 on chrom... 40 5.4
38emb|Z34846.1|SSBAT1G S.scrofa BAT1 gene 40 5.4
39gb|AY113970.1| Arabidopsis thaliana unknown protein (At1g30750) ... 40 5.4
40gb|AY050922.1| Arabidopsis thaliana unknown protein (At1g30750) ... 40 5.4
41emb|CR855302.6| Zebrafish DNA sequence from clone CH211-120A5 in... 40 5.4
42gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, compl... 40 5.4
43gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, comp... 40 5.4
44gb|AF351608.1| Sus scrofa CRY (CRY) mRNA, complete cds 40 5.4
45dbj|AK133760.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 5.4
46dbj|AK150252.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.4
47dbj|AK150123.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.4
48gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 5.4
49dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
50dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
51gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) ch... 40 5.4
52gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 dapto... 40 5.4
53gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 se... 40 5.4
54ref|NM_213881.1| Sus scrofa CRY protein (CRY), mRNA 40 5.4
55dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.4
56dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
57dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.4
58dbj|AK121939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
59gb|AC115945.9| Mus musculus chromosome 3, clone RP24-555P13, com... 40 5.4
60gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.4
61gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
62emb|AM114786.1| Platynereis dumerilii mRNA for Pit1 protein 40 5.4
63gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ... 40 5.4
64emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chr... 40 5.4
65emb|AL731838.19| Mouse DNA sequence from clone RP23-139O16 on ch... 40 5.4 
>gb|BT008921.1| Triticum aestivum clone wyr1c.pk002.o12:fis, full insert mRNA
            sequence
          Length = 1348

 Score =  502 bits (253), Expect = e-139
 Identities = 373/408 (91%), Gaps = 15/408 (3%)
 Strand = Plus / Minus

                                                                        
Query: 4    ttttgataaacttggccattcat--aagact--gataaattctgggtgaaggctacaaca 59
            ||||||| |||||| ||||||||  ||||||  |||||| | ||||||||||||||||||
Sbjct: 1334 ttttgatgaacttgtccattcattaaagactctgataaagtttgggtgaaggctacaaca 1275

                                                                        
Query: 60   accattagcctccttacacaaagacagtaaccaaaatcaccacacatgcttgctttttat 119
            | || |||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 1274 atcagtagcctccttacacaaagaccgcaaccaaaatcaccacacatgcttgctttttat 1215

                                                                        
Query: 120  taagcgcccacgaggtcacacac---tgacacaagaactaaaactcaactcatacctaat 176
            |||||||||||||||||||||||   |||| || |||||||| ||||| |||| ||||||
Sbjct: 1214 taagcgcccacgaggtcacacacacttgactcacgaactaaa-ctcaattcatccctaat 1156

                                                                        
Query: 177  aataa------aagtgcagctaaactcccctaagattcaaccccgacggcgcgacacaag 230
            |||||      |||||||||||||  | |||||||||||||||||| |||||||||||| 
Sbjct: 1155 aataataataaaagtgcagctaaaa-ctcctaagattcaaccccgatggcgcgacacaat 1097

                                                                        
Query: 231  gcgtctctagttgctgcccttgctgatgaactccagggcggtggcggtggtgggcagcgc 290
            | |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1096 gagtctctagttactgcccttgctgatgagctccagggcggtggcggtggtgggcagcgc 1037

                                                                        
Query: 291  cgggatggctcccttcttggtggtgcagatggcaccgcaagcgttcgagaactgcagcac 350
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1036 cgggatggctcccttcttggtggtgcagatggcgccgcaagcgttcgagaactgcagcac 977

                                                            
Query: 351  ctccctcagcttggcctcattgtagaagatggagtcgtccttggagac 398
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976  ctccctcagcttggcctcattgtagaagatggagtcgtccttggagac 929
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>ref|XM_479756.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1314

 Score =  157 bits (79), Expect = 3e-35
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                        
Query: 248  ccttgctgatgaactccagggcggtggcggtggtgggcagcgccgggatggctcccttct 307
            |||||||||||| |||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029

                                                                        
Query: 308  tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 367
            |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969

                                       
Query: 368  cattgtagaagatggagtcgtccttgg 394
            | |||| ||||||||||||||||||||
Sbjct: 968  cgttgtggaagatggagtcgtccttgg 942
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>ref|XM_507097.1| PREDICTED Oryza sativa (japonica cultivar-group), P0498H04.29 mRNA
          Length = 1422

 Score =  157 bits (79), Expect = 3e-35
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                        
Query: 248  ccttgctgatgaactccagggcggtggcggtggtgggcagcgccgggatggctcccttct 307
            |||||||||||| |||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029

                                                                        
Query: 308  tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 367
            |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969

                                       
Query: 368  cattgtagaagatggagtcgtccttgg 394
            | |||| ||||||||||||||||||||
Sbjct: 968  cgttgtggaagatggagtcgtccttgg 942
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>dbj|AB110164.1| Oryza sativa (japonica cultivar-group) mRNA for fructokinase,
            complete cds, clone: 12FPB009
          Length = 1239

 Score =  157 bits (79), Expect = 3e-35
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                        
Query: 248  ccttgctgatgaactccagggcggtggcggtggtgggcagcgccgggatggctcccttct 307
            |||||||||||| |||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1011 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 952

                                                                        
Query: 308  tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 367
            |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 951  tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 892

                                       
Query: 368  cattgtagaagatggagtcgtccttgg 394
            | |||| ||||||||||||||||||||
Sbjct: 891  cgttgtggaagatggagtcgtccttgg 865
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>gb|AF429947.1| Oryza sativa putative fructokinase II mRNA, complete cds
          Length = 1164

 Score =  157 bits (79), Expect = 3e-35
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                        
Query: 248  ccttgctgatgaactccagggcggtggcggtggtgggcagcgccgggatggctcccttct 307
            |||||||||||| |||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1046 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 987

                                                                        
Query: 308  tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 367
            |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 986  tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 927

                                       
Query: 368  cattgtagaagatggagtcgtccttgg 394
            | |||| ||||||||||||||||||||
Sbjct: 926  cgttgtggaagatggagtcgtccttgg 900
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>dbj|AK099353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041J08, full
            insert sequence
          Length = 1315

 Score =  157 bits (79), Expect = 3e-35
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                        
Query: 248  ccttgctgatgaactccagggcggtggcggtggtgggcagcgccgggatggctcccttct 307
            |||||||||||| |||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029

                                                                        
Query: 308  tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 367
            |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969

                                       
Query: 368  cattgtagaagatggagtcgtccttgg 394
            | |||| ||||||||||||||||||||
Sbjct: 968  cgttgtggaagatggagtcgtccttgg 942
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>dbj|AK070120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041C07, full
            insert sequence
          Length = 1422

 Score =  157 bits (79), Expect = 3e-35
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                        
Query: 248  ccttgctgatgaactccagggcggtggcggtggtgggcagcgccgggatggctcccttct 307
            |||||||||||| |||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029

                                                                        
Query: 308  tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 367
            |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969

                                       
Query: 368  cattgtagaagatggagtcgtccttgg 394
            | |||| ||||||||||||||||||||
Sbjct: 968  cgttgtggaagatggagtcgtccttgg 942
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>dbj|AK061391.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C10, full
           insert sequence
          Length = 1165

 Score =  157 bits (79), Expect = 3e-35
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                       
Query: 248 ccttgctgatgaactccagggcggtggcggtggtgggcagcgccgggatggctcccttct 307
           |||||||||||| |||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 819 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 760

                                                                       
Query: 308 tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 367
           |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 759 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 700

                                      
Query: 368 cattgtagaagatggagtcgtccttgg 394
           | |||| ||||||||||||||||||||
Sbjct: 699 cgttgtggaagatggagtcgtccttgg 673
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  125 bits (63), Expect = 1e-25
 Identities = 102/115 (88%)
 Strand = Plus / Minus

                                                                          
Query: 248    ccttgctgatgaactccagggcggtggcggtggtgggcagcgccgggatggctcccttct 307
              |||||||||||| |||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 697311 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 697252

                                                                     
Query: 308    tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagctt 362
              |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||
Sbjct: 697251 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagctt 697197



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    gaagatggagtcgtccttgg 394
              ||||||||||||||||||||
Sbjct: 697108 gaagatggagtcgtccttgg 697089
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>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0498H04
          Length = 151046

 Score =  125 bits (63), Expect = 1e-25
 Identities = 102/115 (88%)
 Strand = Plus / Minus

                                                                          
Query: 248    ccttgctgatgaactccagggcggtggcggtggtgggcagcgccgggatggctcccttct 307
              |||||||||||| |||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 124689 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 124630

                                                                     
Query: 308    tggtggtgcagatggcaccgcaagcgttcgagaactgcagcacctccctcagctt 362
              |||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||
Sbjct: 124629 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagctt 124575



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    gaagatggagtcgtccttgg 394
              ||||||||||||||||||||
Sbjct: 124486 gaagatggagtcgtccttgg 124467
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>gb|BT016469.1| Zea mays clone Contig302 mRNA sequence
          Length = 1305

 Score =  113 bits (57), Expect = 4e-22
 Identities = 111/129 (86%)
 Strand = Plus / Plus

                                                                       
Query: 266 gggcggtggcggtggtgggcagcgccgggatggctcccttcttggtggtgcagatggcac 325
           |||||||||||   |||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 459 gggcggtggcgaccgtgggcagcgccgggatggcgcccttcttggtggtgcagatggcgc 518

                                                                       
Query: 326 cgcaagcgttcgagaactgcagcacctccctcagcttggcctcattgtagaagatggagt 385
           |||| ||||| |||||||  ||  |||| |  |||||  |||| |||| |||||||||||
Sbjct: 519 cgcaggcgttggagaacttgagagcctcgcggagcttctcctcgttgtggaagatggagt 578

                    
Query: 386 cgtccttgg 394
           |||||||||
Sbjct: 579 cgtccttgg 587
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>gb|AY197773.1| Zea mays fructokinase 2 (frk2) mRNA, complete cds
          Length = 1358

 Score =  113 bits (57), Expect = 4e-22
 Identities = 111/129 (86%)
 Strand = Plus / Minus

                                                                        
Query: 266  gggcggtggcggtggtgggcagcgccgggatggctcccttcttggtggtgcagatggcac 325
            |||||||||||   |||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 1090 gggcggtggcgaccgtgggcagcgccgggatggcgcccttcttggtggtgcagatggcgc 1031

                                                                        
Query: 326  cgcaagcgttcgagaactgcagcacctccctcagcttggcctcattgtagaagatggagt 385
            |||| ||||| |||||||  ||  |||| |  |||||  |||| |||| |||||||||||
Sbjct: 1030 cgcaggcgttggagaacttgagagcctcgcggagcttctcctcgttgtggaagatggagt 971

                     
Query: 386  cgtccttgg 394
            |||||||||
Sbjct: 970  cgtccttgg 962
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>gb|AY112523.1| Zea mays CL966_1 mRNA sequence
          Length = 1528

 Score =  113 bits (57), Expect = 4e-22
 Identities = 111/129 (86%)
 Strand = Plus / Minus

                                                                        
Query: 266  gggcggtggcggtggtgggcagcgccgggatggctcccttcttggtggtgcagatggcac 325
            |||||||||||   |||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 1092 gggcggtggcgaccgtgggcagcgccgggatggcgcccttcttggtggtgcagatggcgc 1033

                                                                        
Query: 326  cgcaagcgttcgagaactgcagcacctccctcagcttggcctcattgtagaagatggagt 385
            |||| ||||| |||||||  ||  |||| |  |||||  |||| |||| |||||||||||
Sbjct: 1032 cgcaggcgttggagaacttgagggcctcgcggagcttctcctcgttgtggaagatggagt 973

                     
Query: 386  cgtccttgg 394
            |||||||||
Sbjct: 972  cgtccttgg 964
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 261     ctccagggcggtggcggtggtgggcagcgcc 291
               |||| |||||||||||||| |||||||||||
Sbjct: 3534779 ctcctgggcggtggcggtgttgggcagcgcc 3534749



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    gtgggcagcgccgggatggc 299
              ||||||||||||||||||||
Sbjct: 409411 gtgggcagcgccgggatggc 409430
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>gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynthetic gene cluster,
             complete sequence
          Length = 49461

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 262   tccagggcggtggcggtggtgg 283
             ||||||||||||||||||||||
Sbjct: 26035 tccagggcggtggcggtggtgg 26014
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>gb|AF457962.1| Zea mays clone csi1n.pk0029.c8, mRNA sequence
          Length = 543

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 365 cctcattgtagaagatggagtcgtccttgg 394
           |||| |||| ||||||||||||||||||||
Sbjct: 478 cctcgttgtggaagatggagtcgtccttgg 449
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>emb|AL132709.5|CNS01DTB Human chromosome 14 DNA sequence BAC R-909M7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 200540

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 279   ggtgggcagcgccgggatggct 300
             ||||||||||||||||||||||
Sbjct: 43941 ggtgggcagcgccgggatggct 43920
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 283     ggcagcgccgggatggctccc 303
               |||||||||||||||||||||
Sbjct: 1879208 ggcagcgccgggatggctccc 1879228
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>ref|XM_868360.1| PREDICTED: Bos taurus similar to 5-hydroxytryptamine 1E receptor
           (5-HT-1E) (Serotonin receptor 1E) (5-HT1E) (S31)
           (LOC616356), mRNA
          Length = 1098

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 303 cttcttggtggtgcagatggc 323
           |||||||||||||||||||||
Sbjct: 156 cttcttggtggtgcagatggc 136
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>gb|AY344643.1| Cavia porcellus serotonin receptor (5HT1E) mRNA, complete cds
          Length = 1098

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 303 cttcttggtggtgcagatggc 323
           |||||||||||||||||||||
Sbjct: 156 cttcttggtggtgcagatggc 136
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>gb|AY197772.1| Zea mays fructokinase 1 (frk1) mRNA, complete cds
          Length = 1262

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 279 ggtgggcagcgccgggatggctcccttcttggtggtg 315
           ||||||||||| |||||| || |||||||| ||||||
Sbjct: 954 ggtgggcagcgacgggatcgcccccttcttcgtggtg 918
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>gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complete sequence
          Length = 179362

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 76    cacaaagacagtaaccaaaat 96
             |||||||||||||||||||||
Sbjct: 96078 cacaaagacagtaaccaaaat 96058
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>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 174    aataataaaagtgcagctaaa 194
              |||||||||||||||||||||
Sbjct: 763422 aataataaaagtgcagctaaa 763442
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 266     gggcggtggcggtggtgggcagcgccggg 294
               |||||||||||| || |||||||||||||
Sbjct: 2040546 gggcggtggcggcggggggcagcgccggg 2040518
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>gb|AC147565.4| Mus musculus BAC clone RP23-116P18 from 9, complete sequence
          Length = 206373

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 76   cacaaagacagtaaccaaaat 96
            |||||||||||||||||||||
Sbjct: 3246 cacaaagacagtaaccaaaat 3266
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>ref|NM_102811.1| Arabidopsis thaliana unknown protein AT1G30750 mRNA, complete cds
          Length = 803

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 85  agtaaccaaaatcaccacac 104
           ||||||||||||||||||||
Sbjct: 108 agtaaccaaaatcaccacac 127
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>ref|NM_196736.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0094K20.11), mRNA
          Length = 3093

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 gggcggtggcggtggtgggc 285
           ||||||||||||||||||||
Sbjct: 68  gggcggtggcggtggtgggc 87
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>ref|NM_193931.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 492

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 262 tccagggcggtggcggtggtgggc 285
           ||||||||||||||||||| ||||
Sbjct: 368 tccagggcggtggcggtggagggc 391
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>ref|XM_361361.1| Magnaporthe grisea 70-15 predicted protein (MG03835.4) partial mRNA
          Length = 570

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 265 agggcggtggcggtggtggg 284
           ||||||||||||||||||||
Sbjct: 154 agggcggtggcggtggtggg 135
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>gb|BC003324.1| Mus musculus cDNA sequence BC003324, mRNA (cDNA clone MGC:7036
           IMAGE:3156139), complete cds
          Length = 1278

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 ctgcagcacctccctcagct 361
           ||||||||||||||||||||
Sbjct: 546 ctgcagcacctccctcagct 527
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>ref|NM_030259.1| Mus musculus cDNA sequence BC003324 (BC003324), mRNA
          Length = 1278

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 ctgcagcacctccctcagct 361
           ||||||||||||||||||||
Sbjct: 546 ctgcagcacctccctcagct 527
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>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence
          Length = 225376

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 342    ctgcagcacctccctcagct 361
              ||||||||||||||||||||
Sbjct: 212222 ctgcagcacctccctcagct 212241
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>gb|BT012972.1| Lycopersicon esculentum clone 114182R, mRNA sequence
          Length = 2213

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   cataagactgataaattctg 43
            ||||||||||||||||||||
Sbjct: 1979 cataagactgataaattctg 1960
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>emb|AJ251914.1|SSC251914 Sus scrofa MHC class I SLA genes, haplotype H01, clone BAC 493A6
          Length = 158063

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 83    acagtaaccaaaatcaccacacat 106
             |||||||||||||| |||||||||
Sbjct: 46198 acagtaaccaaaattaccacacat 46175
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>gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, complete sequence
          Length = 195651

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   ctgcagcacctccctcagct 361
             ||||||||||||||||||||
Sbjct: 45944 ctgcagcacctccctcagct 45963
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>emb|AL356632.12| Human DNA sequence from clone RP11-7D5 on chromosome 10 Contains a
             ribosomal protein S3A (RPS3A) pseudogene, the PYCS gene
             for pyrroline-5-carboxylate synthetase (glutamate
             gamma-semialdehyde synthetase) (GSAS, P5CS), the gene for
             a novel protein (DKFZP564D116, FLJ40976), the 5' end of
             the ENTPD1 gene for ectonucleoside triphosphate
             diphosphohydrolase 1 and two CpG islands, complete
             sequence
          Length = 163166

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 270   ggtggcggtggtgggcagcgccgggatg 297
             |||||||||||||| |||||||||||||
Sbjct: 89870 ggtggcggtggtgg-cagcgccgggatg 89844
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>emb|AL138889.9| Human DNA sequence from clone RP3-468B3 on chromosome 6 Contains the 5'
             end of the MLN gene for motilin, part of a novel gene and
             a CpG island, complete sequence
          Length = 136886

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   taaaagtgcagctaaactcc 198
             ||||||||||||||||||||
Sbjct: 17442 taaaagtgcagctaaactcc 17423
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>emb|Z34846.1|SSBAT1G S.scrofa BAT1 gene
          Length = 10674

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 83   acagtaaccaaaatcaccacacat 106
            |||||||||||||| |||||||||
Sbjct: 8819 acagtaaccaaaattaccacacat 8796
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>gb|AY113970.1| Arabidopsis thaliana unknown protein (At1g30750) mRNA, complete cds
          Length = 670

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 85  agtaaccaaaatcaccacac 104
           ||||||||||||||||||||
Sbjct: 87  agtaaccaaaatcaccacac 106
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>gb|AY050922.1| Arabidopsis thaliana unknown protein (At1g30750) mRNA, complete cds
          Length = 822

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 85  agtaaccaaaatcaccacac 104
           ||||||||||||||||||||
Sbjct: 110 agtaaccaaaatcaccacac 129
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>emb|CR855302.6| Zebrafish DNA sequence from clone CH211-120A5 in linkage group 3,
              complete sequence
          Length = 182196

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 154    ctaaaactcaactcatacctaata 177
              |||||||||||||||||| |||||
Sbjct: 159990 ctaaaactcaactcatacataata 160013
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>gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, complete sequence
          Length = 190848

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   atgcttgctttttattaagc 124
             ||||||||||||||||||||
Sbjct: 12985 atgcttgctttttattaagc 12966
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>gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, complete sequence
          Length = 143534

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   atgcttgctttttattaagc 124
             ||||||||||||||||||||
Sbjct: 29580 atgcttgctttttattaagc 29599
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>gb|AF351608.1| Sus scrofa CRY (CRY) mRNA, complete cds
          Length = 1513

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 ggtggcggtggtgggcagcg 289
           ||||||||||||||||||||
Sbjct: 68  ggtggcggtggtgggcagcg 87
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>dbj|AK133760.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730407M15 product:similar to
           Hypothetical protein FLJ32372 (P40phox binding protein)
           [Homo sapiens], full insert sequence
          Length = 1335

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 ctgcagcacctccctcagct 361
           ||||||||||||||||||||
Sbjct: 678 ctgcagcacctccctcagct 659
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>dbj|AK150252.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530149F13 product:similar to
           Hypothetical protein FLJ32372 (P40phox binding protein)
           [Homo sapiens], full insert sequence
          Length = 1122

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 ctgcagcacctccctcagct 361
           ||||||||||||||||||||
Sbjct: 649 ctgcagcacctccctcagct 630
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>dbj|AK150123.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530133F06 product:similar to
           Hypothetical protein FLJ32372 (P40phox binding protein)
           [Homo sapiens], full insert sequence
          Length = 1123

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 ctgcagcacctccctcagct 361
           ||||||||||||||||||||
Sbjct: 650 ctgcagcacctccctcagct 631
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    cggtggcggtggtgggcagc 288
              ||||||||||||||||||||
Sbjct: 165052 cggtggcggtggtgggcagc 165033
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 266      gggcggtggcggtggtgggc 285
                ||||||||||||||||||||
Sbjct: 15607308 gggcggtggcggtggtgggc 15607327
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 262      tccagggcggtggcggtggtgggc 285
                ||||||||||||||||||| ||||
Sbjct: 15974811 tccagggcggtggcggtggagggc 15974788
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>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20,
             complete sequence
          Length = 193119

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   gggcggtggcggtggtgggc 285
             ||||||||||||||||||||
Sbjct: 94674 gggcggtggcggtggtgggc 94693
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>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic
             gene cluster, partial sequence
          Length = 127559

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   cagggcggtggcggtggtgg 283
             ||||||||||||||||||||
Sbjct: 70283 cagggcggtggcggtggtgg 70264
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>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence
          Length = 96183

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    agtaaccaaaatcaccacac 104
             ||||||||||||||||||||
Sbjct: 80853 agtaaccaaaatcaccacac 80834
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>ref|NM_213881.1| Sus scrofa CRY protein (CRY), mRNA
          Length = 1513

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 ggtggcggtggtgggcagcg 289
           ||||||||||||||||||||
Sbjct: 68  ggtggcggtggtgggcagcg 87
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 266     gggcggtggcggtggtgggcagcg 289
               |||||| |||||||||||||||||
Sbjct: 1986506 gggcggaggcggtggtgggcagcg 1986529
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>dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0091E23
          Length = 155939

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 262   tccagggcggtggcggtggtgggc 285
             ||||||||||||||||||| ||||
Sbjct: 66396 tccagggcggtggcggtggagggc 66373
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 267     ggcggtggcggtggtgggcagcgc 290
               |||||||||||||| |||||||||
Sbjct: 5988162 ggcggtggcggtggcgggcagcgc 5988185
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>dbj|AK121939.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D06, full
           insert sequence
          Length = 3100

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 gggcggtggcggtggtgggc 285
           ||||||||||||||||||||
Sbjct: 204 gggcggtggcggtggtgggc 223
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>gb|AC115945.9| Mus musculus chromosome 3, clone RP24-555P13, complete sequence
          Length = 172240

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 362    tggcctcattgtagaagatg 381
              ||||||||||||||||||||
Sbjct: 143951 tggcctcattgtagaagatg 143970
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 269     cggtggcggtggtgggcagc 288
               ||||||||||||||||||||
Sbjct: 4065930 cggtggcggtggtgggcagc 4065911
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 266      gggcggtggcggtggtgggc 285
                ||||||||||||||||||||
Sbjct: 15615549 gggcggtggcggtggtgggc 15615568
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>emb|AM114786.1| Platynereis dumerilii mRNA for Pit1 protein
          Length = 1474

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 351 ctccctcagcttggcctcat 370
           ||||||||||||||||||||
Sbjct: 745 ctccctcagcttggcctcat 726
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>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    tcatacctaataataaaagt 185
              ||||||||||||||||||||
Sbjct: 115986 tcatacctaataataaaagt 115967
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>emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chromosome 2, complete
              sequence
          Length = 142263

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    catacctaataataaaagtg 186
              ||||||||||||||||||||
Sbjct: 103740 catacctaataataaaagtg 103721
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>emb|AL731838.19| Mouse DNA sequence from clone RP23-139O16 on chromosome X, complete
              sequence
          Length = 212472

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 92     aaaatcaccacacatgcttgctttttat 119
              ||||| || |||||||||||||||||||
Sbjct: 112125 aaaataacaacacatgcttgctttttat 112152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,134,467
Number of Sequences: 3902068
Number of extensions: 4134467
Number of successful extensions: 94489
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 93844
Number of HSP's gapped (non-prelim): 640
length of query: 401
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 379
effective length of database: 17,147,199,772
effective search space: 6498788713588
effective search space used: 6498788713588
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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