>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus
              region
          Length = 129099

 Score =  109 bits (55), Expect = 8e-21
 Identities = 64/67 (95%)
 Strand = Plus / Plus

                                                                          
Query: 174    atacatcaatccacccgaagccaccattcacacctacaaactcgataatatggagtgctc 233
              |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 115598 atacatcaatccacccaaagccaccactcacacctacaaactcgataatgtggagtgctc 115657

                     
Query: 234    tcactcc 240
              |||||||
Sbjct: 115658 tcactcc 115664

>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                          
Query: 171    aacatacatcaatccacccgaagccaccattcacacctacaaactcgataatatggagtg 230
              ||||||||||||||||||||||||||||| || |||||||||| |||||||||||||| |
Sbjct: 184742 aacatacatcaatccacccgaagccaccactcgcacctacaaattcgataatatggagcg 184801

                        
Query: 231    ctctcactcc 240
              |||| |||||
Sbjct: 184802 ctcttactcc 184811

>gb|AY009939.1| Hordeum vulgare Mla1 (Mla1) mRNA, complete cds
          Length = 3380

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 65/70 (92%)
 Strand = Plus / Minus

                                                                        
Query: 171  aacatacatcaatccacccgaagccaccattcacacctacaaactcgataatatggagtg 230
            ||||||||||||||||||||||||||||| || |||||||||| |||||||||||||| |
Sbjct: 3262 aacatacatcaatccacccgaagccaccactcgcacctacaaattcgataatatggagcg 3203

                      
Query: 231  ctctcactcc 240
            |||| |||||
Sbjct: 3202 ctcttactcc 3193

>gb|AY009938.2| Hordeum vulgare subsp. vulgare MLA1-2 (Mla1-2) gene, partial cds; and
             MLA1 (Mla1) gene, complete cds
          Length = 18958

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 65/70 (92%)
 Strand = Plus / Minus

                                                                         
Query: 171   aacatacatcaatccacccgaagccaccattcacacctacaaactcgataatatggagtg 230
             ||||||||||||||||||||||||||||| || |||||||||| |||||||||||||| |
Sbjct: 14364 aacatacatcaatccacccgaagccaccactcgcacctacaaattcgataatatggagcg 14305

                       
Query: 231   ctctcactcc 240
             |||| |||||
Sbjct: 14304 ctcttactcc 14295

>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                          
Query: 171    aacatacatcaatccacccgaagccaccattcacacctacaaactcgataatatggagtg 230
              ||||||||| || |||| ||||| ||||| |||||| |||||| ||||||||||||||||
Sbjct: 176669 aacatacattaagccacacgaagacaccactcacacatacaaattcgataatatggagtg 176728

                        
Query: 231    ctctcactcc 240
              ||||||||||
Sbjct: 176729 ctctcactcc 176738

>gb|DQ010081.1| Perna viridis clone GM35 microsatellite sequence
          Length = 577

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 25  agatgagtgagcaaaacttca 45
           |||||||||||||||||||||
Sbjct: 207 agatgagtgagcaaaacttca 227

>emb|AL157369.7| Human DNA sequence from clone RP11-528D24 on chromosome 13 Contains the
             SUCLA2 gene for succinate-CoA ligase, ADP-forming, beta
             subunit (A-BETA), a novel gene and a CpG island, complete
             sequence
          Length = 83827

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 141   tggaaaggtcatttcaagtga 161
             |||||||||||||||||||||
Sbjct: 57008 tggaaaggtcatttcaagtga 56988

>gb|AC122138.2| Homo sapiens chromosome 4 clone RP11-818C3, complete sequence
          Length = 112876

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    aacagagaagtaagaaaaaag 102
             |||||||||||||||||||||
Sbjct: 83227 aacagagaagtaagaaaaaag 83207

>emb|CR596143.1| full-length cDNA clone CS0DJ001YP09 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1414

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 141 tggaaaggtcatttcaagtga 161
           |||||||||||||||||||||
Sbjct: 525 tggaaaggtcatttcaagtga 545

>emb|AL929212.8| Mouse DNA sequence from clone RP23-65G6 on chromosome 2, complete
              sequence
          Length = 255261

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 80     tgaacagagaagtaagaaaaa 100
              |||||||||||||||||||||
Sbjct: 237899 tgaacagagaagtaagaaaaa 237879

>emb|AL683810.10| Mouse DNA sequence from clone RP23-10L18 on chromosome 2, complete
            sequence
          Length = 186882

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 272  tccgtccctgtaacttgtttg 292
            |||||||||||||||||||||
Sbjct: 3592 tccgtccctgtaacttgtttg 3612

>emb|AL732428.7| Mouse DNA sequence from clone RP23-347P2 on chromosome 2, complete
              sequence
          Length = 123627

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 272    tccgtccctgtaacttgtttg 292
              |||||||||||||||||||||
Sbjct: 113622 tccgtccctgtaacttgtttg 113642

>gb|AC122459.2| Mus musculus BAC clone RP24-273F21 from chromosome 15, complete
             sequence
          Length = 156807

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   ggtggtccgtccctgtaact 286
             ||||||||||||||||||||
Sbjct: 63260 ggtggtccgtccctgtaact 63279

>emb|AL591042.5| Human DNA sequence from clone RP11-480L11 on chromosome 1 Contains part
             of the VAV3 gene for VAV3 oncogene, complete sequence
          Length = 148028

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   ggcttttctggtaggcggcc 324
             ||||||||||||||||||||
Sbjct: 59196 ggcttttctggtaggcggcc 59177

>gb|AC107905.5| Homo sapiens chromosome 15, clone CTD-2026J24, complete sequence
          Length = 175627

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    atcagaaaggtggaaaggtc 150
              ||||||||||||||||||||
Sbjct: 163580 atcagaaaggtggaaaggtc 163561

>gb|AE012400.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 308
            of 460 of the complete genome
          Length = 10933

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 387  gcgcgcagcgcaggggcgcggctg 410
            ||||||||||||| ||||||||||
Sbjct: 7664 gcgcgcagcgcagtggcgcggctg 7641

>gb|AC092417.2| Homo sapiens chromosome 3 clone RP11-90M23, complete sequence
          Length = 167263

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 384    gccgcgcgcagcgcaggggcgcgg 407
              ||||||||||| ||||||||||||
Sbjct: 141524 gccgcgcgcagggcaggggcgcgg 141547

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 387     gcgcgcagcgcaggggcgcggctg 410
               ||||||||||||| ||||||||||
Sbjct: 1510722 gcgcgcagcgcagtggcgcggctg 1510745

>gb|AC067958.5| Homo sapiens BAC clone RP11-81F8 from 2, complete sequence
          Length = 74982

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ttttacttattcagatgagt 32
             ||||||||||||||||||||
Sbjct: 56702 ttttacttattcagatgagt 56683

>gb|AC144773.3| Mus musculus BAC clone RP24-176P22 from 1, complete sequence
          Length = 167510

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     acaataatcttttacttatt 23
             ||||||||||||||||||||
Sbjct: 79502 acaataatcttttacttatt 79483

>dbj|AP006193.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-815I22, complete
             sequence
          Length = 205834

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 384   gccgcgcgcagcgcaggggcgcgg 407
             ||||||||||| ||||||||||||
Sbjct: 52384 gccgcgcgcagggcaggggcgcgg 52407

>emb|AL627098.30| Mouse DNA sequence from clone RP23-108K17 on chromosome 4, complete
            sequence
          Length = 208131

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 64   aagttcaggtccaacctgaa 83
            ||||||||||||||||||||
Sbjct: 2367 aagttcaggtccaacctgaa 2386


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,875,043
Number of Sequences: 3902068
Number of extensions: 3875043
Number of successful extensions: 74712
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74628
Number of HSP's gapped (non-prelim): 84
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)