ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart33d04 |
|---|---|
| Clone Library Name | barley_pub |
>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase 2) (AtOPR2) Length = 374 Score = 111 bits (277), Expect(2) = 1e-37 Identities = 53/92 (57%), Positives = 67/92 (72%) Frame = -2 Query: 463 DYMDCHDSDPHALGLHMATKLNDHGILYLHMIEPRMALVDGRRVVPHRLLPYREAFKGTF 284 DYM+ D++P ALGL+M LN +GILY HMIEPRM V H L+P REAFKGTF Sbjct: 243 DYMESGDTNPEALGLYMVESLNKYGILYCHMIEPRMKTVGEIAACSHTLMPMREAFKGTF 302 Query: 283 IANGGYDREEGDKAVSSGYADLVSFGRLFLAN 188 I+ GG+ RE+G++AV+ G DLV++GR FLAN Sbjct: 303 ISAGGFTREDGNEAVAKGRTDLVAYGRWFLAN 334 Score = 64.3 bits (155), Expect(2) = 1e-37 Identities = 29/41 (70%), Positives = 31/41 (75%) Frame = -1 Query: 209 WAALPGKLPKRLELNAPLNKYNRMTFYISDPVVGYTDYPFL 87 W LPKR +L+APLNKYNR TFY SDPVVGYTDYP L Sbjct: 330 WFLANPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYTDYPSL 370
>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (AtOPR1) (FS-AT-I) Length = 372 Score = 109 bits (272), Expect(2) = 6e-37 Identities = 52/92 (56%), Positives = 68/92 (73%) Frame = -2 Query: 463 DYMDCHDSDPHALGLHMATKLNDHGILYLHMIEPRMALVDGRRVVPHRLLPYREAFKGTF 284 DYM+ D++P ALGL+MA LN +GILY H+IE RM + PH L+P R+AFKGTF Sbjct: 241 DYMESGDTNPGALGLYMAESLNKYGILYCHVIEARMKTMGEVHACPHTLMPMRKAFKGTF 300 Query: 283 IANGGYDREEGDKAVSSGYADLVSFGRLFLAN 188 I+ GG+ RE+G++AVS G DLV++GR FLAN Sbjct: 301 ISAGGFTREDGNEAVSKGRTDLVAYGRWFLAN 332 Score = 63.9 bits (154), Expect(2) = 6e-37 Identities = 28/41 (68%), Positives = 32/41 (78%) Frame = -1 Query: 209 WAALPGKLPKRLELNAPLNKYNRMTFYISDPVVGYTDYPFL 87 W LPKR +++APLNKY+R TFY SDPVVGYTDYPFL Sbjct: 328 WFLANPDLPKRFQVDAPLNKYDRPTFYTSDPVVGYTDYPFL 368
>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (LeOPR1) Length = 376 Score = 91.3 bits (225), Expect(2) = 6e-33 Identities = 42/91 (46%), Positives = 62/91 (68%) Frame = -2 Query: 460 YMDCHDSDPHALGLHMATKLNDHGILYLHMIEPRMALVDGRRVVPHRLLPYREAFKGTFI 281 Y + D++P ALGL+M LN + + Y H++EPRM + L+P R+A+KGTFI Sbjct: 246 YNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFI 305 Query: 280 ANGGYDREEGDKAVSSGYADLVSFGRLFLAN 188 GGYDRE+G++A+ ADLV++GRLF++N Sbjct: 306 VAGGYDREDGNRALIEDRADLVAYGRLFISN 336 Score = 68.6 bits (166), Expect(2) = 6e-33 Identities = 30/34 (88%), Positives = 31/34 (91%) Frame = -1 Query: 188 LPKRLELNAPLNKYNRMTFYISDPVVGYTDYPFL 87 LPKR ELNAPLNKYNR TFY SDP+VGYTDYPFL Sbjct: 339 LPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFL 372
>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)| (LeOPR2) Length = 355 Score = 92.4 bits (228), Expect(2) = 1e-32 Identities = 45/86 (52%), Positives = 60/86 (69%) Frame = -2 Query: 445 DSDPHALGLHMATKLNDHGILYLHMIEPRMALVDGRRVVPHRLLPYREAFKGTFIANGGY 266 DS+ AL +MA +L+ G+LYLH++EPR V LLP R+AFKGT IA+GGY Sbjct: 237 DSNSEALATYMANELSKLGVLYLHVMEPR-------ETVNRSLLPIRKAFKGTLIASGGY 289 Query: 265 DREEGDKAVSSGYADLVSFGRLFLAN 188 + +G+KA+ YADL+SFGR+FLAN Sbjct: 290 GKSDGEKAIDENYADLISFGRMFLAN 315 Score = 66.6 bits (161), Expect(2) = 1e-32 Identities = 27/34 (79%), Positives = 31/34 (91%) Frame = -1 Query: 188 LPKRLELNAPLNKYNRMTFYISDPVVGYTDYPFL 87 LPKR E+NAPLNKYNR TFY +DP++GYTDYPFL Sbjct: 318 LPKRFEVNAPLNKYNRSTFYTNDPIIGYTDYPFL 351
>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) Length = 396 Score = 70.9 bits (172), Expect(2) = 8e-25 Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 14/107 (13%) Frame = -2 Query: 466 MDYMDCHDSDPHALGLHMATKLND------HGILYLHMIEPRMALVD-------GRRVVP 326 +D++D DS+P +LGL + +LN + YLH+ +PR G Sbjct: 242 IDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEE 301 Query: 325 HRLL-PYREAFKGTFIANGGYDREEGDKAVSSGYADLVSFGRLFLAN 188 RL+ R A++GTFI +GGY RE G +AV+ G ADLVS+GRLF++N Sbjct: 302 ARLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISN 348 Score = 61.6 bits (148), Expect(2) = 8e-25 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -1 Query: 188 LPKRLELNAPLNKYNRMTFYISDPVVGYTDYPFL 87 L R++LNAPLNKYNR TFY DPVVGYTDYPFL Sbjct: 351 LVMRIKLNAPLNKYNRKTFYTQDPVVGYTDYPFL 384
>OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like protein 1 (EC| 1.3.1.-) Length = 324 Score = 103 bits (256), Expect(2) = 1e-24 Identities = 53/92 (57%), Positives = 61/92 (66%) Frame = -2 Query: 463 DYMDCHDSDPHALGLHMATKLNDHGILYLHMIEPRMALVDGRRVVPHRLLPYREAFKGTF 284 DYM+ D+DP LGL+MA LN ILY HMIEPRM V L P R AF GTF Sbjct: 218 DYMESGDTDPKRLGLYMAKSLNRFEILYCHMIEPRMKTVSEIFECRESLTPMRNAFNGTF 277 Query: 283 IANGGYDREEGDKAVSSGYADLVSFGRLFLAN 188 I GGY RE+G+KAV+ G DLV++GRLFLAN Sbjct: 278 IVAGGYTREDGNKAVAEGRTDLVAYGRLFLAN 309 Score = 28.5 bits (62), Expect(2) = 1e-24 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 188 LPKRLELNAPLNK 150 LPKR ELNAPLNK Sbjct: 312 LPKRFELNAPLNK 324
>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (Delayed dehiscence 1) (AtOPR3) Length = 391 Score = 66.6 bits (161), Expect(2) = 3e-21 Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 14/107 (13%) Frame = -2 Query: 466 MDYMDCHDSDPHALGLHMATKLND------HGILYLHMIEPRMALV----DGRRVVPHR- 320 +D++D DSDP +LGL + LN + YLH+ +PR GR+ Sbjct: 243 IDHLDATDSDPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDEEE 302 Query: 319 ---LLPYREAFKGTFIANGGYDREEGDKAVSSGYADLVSFGRLFLAN 188 + R A+ GTF+++GG+++E G +AV G ADLVS+GRLF+AN Sbjct: 303 AKLMKSLRMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIAN 349 Score = 53.9 bits (128), Expect(2) = 3e-21 Identities = 23/34 (67%), Positives = 26/34 (76%) Frame = -1 Query: 188 LPKRLELNAPLNKYNRMTFYISDPVVGYTDYPFL 87 L R +++ LNKYNR TFY DPVVGYTDYPFL Sbjct: 352 LVSRFKIDGELNKYNRKTFYTQDPVVGYTDYPFL 385
>OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 392 Score = 42.4 bits (98), Expect(2) = 1e-09 Identities = 19/33 (57%), Positives = 22/33 (66%) Frame = -1 Query: 188 LPKRLELNAPLNKYNRMTFYISDPVVGYTDYPF 90 LP RL+ N PLNK++R TFY GY DYPF Sbjct: 349 LPFRLKYNLPLNKWDRATFYTKMSPKGYIDYPF 381 Score = 38.5 bits (88), Expect(2) = 1e-09 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Frame = -2 Query: 445 DSDPHALGLHMATKLNDH--GILYLHMIEPRMALVDGRRVVPHR-LLPYREAFKGTFIAN 275 D D + M K+ + + YLH IEPR + + L Y+ + FI Sbjct: 259 DKDSFEAHVFMIKKIKERFPNLAYLHAIEPRQYWNGHVHITQEKNTLIYKNLWGDPFITA 318 Query: 274 GGYDREEGDKAVSSGYAD--LVSFGRLFLAN 188 GG+DR D A+ + LV+FGR FL+N Sbjct: 319 GGHDR---DSAIQMAEQENTLVAFGRYFLSN 346
>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 382 Score = 39.3 bits (90), Expect(2) = 1e-08 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Frame = -2 Query: 388 ILYLHMIEPRMALVDGRRVVPHRLLPYREAF-KGTFIANGGYDREEGDKAVSSGYADLVS 212 + Y+H IEPR + V + + + + KG FI GGYD E +A + LV+ Sbjct: 273 LAYIHAIEPRKYWSGHKLVSSEQNTSFLQKYWKGPFITAGGYDPETAVQAANE-RGVLVA 331 Query: 211 FGRLFLAN 188 FGR F+AN Sbjct: 332 FGRNFIAN 339 Score = 38.1 bits (87), Expect(2) = 1e-08 Identities = 15/30 (50%), Positives = 22/30 (73%) Frame = -1 Query: 179 RLELNAPLNKYNRMTFYISDPVVGYTDYPF 90 R++ + PLNK++R +FY+ GYTDYPF Sbjct: 345 RIKHHIPLNKWDRSSFYLPKTEKGYTDYPF 374
>NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-ethylmaleimide| reducing enzyme) Length = 365 Score = 44.7 bits (104), Expect = 1e-04 Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Frame = -2 Query: 445 DSDPH--ALGLHMATKLNDHGILYLHMIEPRMALVDGRRVVPHRLLPYREAFKGTFIANG 272 D+ P+ A L++ +L GI YLHM EP A G R F G I G Sbjct: 245 DNGPNEEADALYLIEQLGKRGIAYLHMSEPDWA--GGEPYTDAFREKVRARFHGPIIGAG 302 Query: 271 GYDREEGDKAVSSGYADLVSFGRLFLAN 188 Y E+ + + G D V+FGR ++AN Sbjct: 303 AYTVEKAETLIGKGLIDAVAFGRDWIAN 330
>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)| Length = 399 Score = 37.0 bits (84), Expect = 0.025 Identities = 18/29 (62%), Positives = 19/29 (65%) Frame = -1 Query: 179 RLELNAPLNKYNRMTFYISDPVVGYTDYP 93 RLE PLNKY+R TFY GYTDYP Sbjct: 359 RLEEGLPLNKYDRSTFYTMS-AEGYTDYP 386
>OPRL2_ARATH (Q9C5W1) Putative 12-oxophytodienoate reductase-like protein 2 (EC| 1.3.1.-) Length = 269 Score = 34.3 bits (77), Expect = 0.16 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = -2 Query: 463 DYMDCHDSDPHALGLHMATKLNDHGI 386 DYM+ DS+P ALGL++ +N HG+ Sbjct: 233 DYMESGDSNPEALGLYLVQAMNKHGM 258
>OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yellow enzyme 2)| Length = 399 Score = 33.9 bits (76), Expect = 0.21 Identities = 18/32 (56%), Positives = 19/32 (59%) Frame = -1 Query: 188 LPKRLELNAPLNKYNRMTFYISDPVVGYTDYP 93 L RLE PLNKY+R TFY GY DYP Sbjct: 356 LVDRLEKGLPLNKYDRDTFY-KMSAEGYIDYP 386
>OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 399 Score = 33.5 bits (75), Expect = 0.28 Identities = 18/32 (56%), Positives = 19/32 (59%) Frame = -1 Query: 188 LPKRLELNAPLNKYNRMTFYISDPVVGYTDYP 93 L RLE PLNKY+R TFY GY DYP Sbjct: 356 LVDRLEKGLPLNKYDRDTFY-QMSAHGYIDYP 386
>KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 398 Score = 32.0 bits (71), Expect = 0.80 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = -1 Query: 188 LPKRLELNAPLNKYNRMTFYISDPVVGYTDYP 93 L +RLE PLN+Y+R +FY GY DYP Sbjct: 356 LVERLEKGLPLNQYDRPSFY-KMSAEGYIDYP 386
>PTTBC_BACSU (P39794) PTS system trehalose-specific EIIBC component (EIIBC-Tre)| (EII-Tre) [Includes: Trehalose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system trehalose-specific EIIB component); Trehalose permease IIC component Length = 470 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = -2 Query: 361 RMALVDGRRVVPHRLLPYREAFKGTFIANGGYDREEGDKAVSSGYADLV 215 R AL+D +V +L + KG+F NG + G V+ YA+LV Sbjct: 32 RFALIDESKV-DQEMLDQIDVVKGSFSTNGQFQVVIGQGTVNKVYAELV 79
>ARGC_SILPO (Q5LS92) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 342 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/45 (28%), Positives = 19/45 (42%) Frame = +2 Query: 233 RGDRLVPLFPIIPTICNEGALEGLPVGQQPVRHHPPAVDECHTGL 367 RGD + +E + LP G+ P HH + CH G+ Sbjct: 249 RGDAQTVFQTLAAAYADEPFVHVLPFGETPSTHHVRGSNHCHIGV 293 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,563,106 Number of Sequences: 219361 Number of extensions: 957645 Number of successful extensions: 2892 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2815 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2888 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
