ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart33d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4... 60 7e-06
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
3dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
4dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
5dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
6gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8... 56 1e-04
7dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
8gb|AY108381.1| Zea mays PCO088244 mRNA sequence 56 1e-04
9gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone ... 56 1e-04
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
11dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
12dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
13dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
14ref|XM_648008.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 46 0.10
15ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate ... 42 1.6
16ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate ... 42 1.6
17gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds 42 1.6
18emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate ... 42 1.6
19gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, com... 42 1.6
20gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28... 42 1.6
21gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete s... 42 1.6
22gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate re... 42 1.6
23dbj|AB030705.1| Lithospermum erythrorhizon mRNA for LEDI-5a prot... 42 1.6
24gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7... 40 6.3
25gb|AC165353.4| Mus musculus BAC clone RP23-167C2 from chromosome... 40 6.3
26gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 6.3
27ref|XM_746355.1| Aspergillus fumigatus Af293 multidrug resistant... 40 6.3
28gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosom... 40 6.3
29gb|AF098985.2| Caenorhabditis elegans cosmid C08G5, complete seq... 40 6.3
30emb|AL589846.5| Human DNA sequence from clone RP11-199O16 on chr... 40 6.3
31emb|AL121770.1|SPAC821 S.pombe chromosome I cosmid c821 40 6.3
32dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 6.3
33gb|AE005923.1| Caulobacter crescentus CB15 section 249 of 359 of... 40 6.3
34gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, com... 40 6.3
35gb|AC048362.14| Mus musculus, clone RP23-105E2, complete sequence 40 6.3
36ref|NM_061403.1| Caenorhabditis elegans C08G5.6 (C08G5.6) mRNA, ... 40 6.3
37emb|BX934911.1| Gallus gallus finished cDNA, clone ChEST150h3 40 6.3
38gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana... 40 6.3
39emb|AL845323.18| Mouse DNA sequence from clone RP23-304D11 on ch... 40 6.3
40dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
41dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
42dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
43gb|AF099188.1|AF099188 Caulobacter crescentus cell division prot... 40 6.3
44dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
45gb|AY106967.1| Zea mays PCO088243 mRNA sequence 40 6.3
46gb|AF009512.1|AF009512 Schizosaccharomyces pombe protein kinase ... 40 6.3
47gb|AC161251.3| Mus musculus BAC clone RP24-174C13 from chromosom... 40 6.3
48gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complet... 40 6.3
49emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chro... 40 6.3 
>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds
          Length = 1833

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                          
Query: 434  cgggtcggagtcgtggcagtccatgtagtc 463
            ||||||||||||||||||||||||||||||
Sbjct: 1392 cgggtcggagtcgtggcagtccatgtagtc 1363
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                              
Query: 434      cgggtcggagtcgtggcagtccatgtagtc 463
                ||||||||||||||||||||||||||||||
Sbjct: 15167683 cgggtcggagtcgtggcagtccatgtagtc 15167712
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>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0043B10
          Length = 167399

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                            
Query: 434    cgggtcggagtcgtggcagtccatgtagtc 463
              ||||||||||||||||||||||||||||||
Sbjct: 139649 cgggtcggagtcgtggcagtccatgtagtc 139678
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>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0493G01
          Length = 167587

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                           
Query: 434   cgggtcggagtcgtggcagtccatgtagtc 463
             ||||||||||||||||||||||||||||||
Sbjct: 21056 cgggtcggagtcgtggcagtccatgtagtc 21085
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>dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N02, full
            insert sequence
          Length = 2710

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                          
Query: 434  cgggtcggagtcgtggcagtccatgtagtc 463
            ||||||||||||||||||||||||||||||
Sbjct: 2174 cgggtcggagtcgtggcagtccatgtagtc 2145
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>gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8) mRNA, complete cds
          Length = 1529

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 91   aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 138
            ||||||||||| |||||||| ||||||||||| | | |||||||||||
Sbjct: 1269 aacgggtagtccgtgtaaccaacgacgggatccggggtgtagaacgtc 1222
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>dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-H07, full
            insert sequence
          Length = 1360

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 91   aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 138
            ||||||||||||||||| ||| ||||||| |||| | |||||||||||
Sbjct: 1150 aacgggtagtcggtgtagccggcgacggggtcggcggtgtagaacgtc 1103



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 411 gccatgtggaggccgagcgcgtgcgggtcggagtcg 446
           |||||||||  | ||||||||| |||||||||||||
Sbjct: 802 gccatgtgggcggcgagcgcgtccgggtcggagtcg 767
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>gb|AY108381.1| Zea mays PCO088244 mRNA sequence
          Length = 694

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 91  aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 138
           ||||||||||| |||||||| ||||||||||| | | |||||||||||
Sbjct: 434 aacgggtagtccgtgtaaccaacgacgggatccggggtgtagaacgtc 387
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>gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBa0043H01, from
             chromosome 4, complete sequence
          Length = 15426

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 91    aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 138
             ||||||||||||||||| ||| ||||||| |||| | |||||||||||
Sbjct: 12779 aacgggtagtcggtgtagccggcgacggggtcggcggtgtagaacgtc 12826



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 411   gccatgtggaggccgagcgcgtgcgggtcggagtcg 446
             |||||||||  | ||||||||| |||||||||||||
Sbjct: 13127 gccatgtgggcggcgagcgcgtccgggtcggagtcg 13162
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 434     cgggtcggagtcgtggcagtccatgtagtcca 465
               |||||||||||||  |||||||||||||||||
Sbjct: 5890004 cgggtcggagtcgacgcagtccatgtagtcca 5890035



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 434     cgggtcggagtcgtggcagtccatgtagtcca 465
               |||||||||||||  |||||||||| ||||||
Sbjct: 5895993 cgggtcggagtcgacgcagtccatgaagtcca 5896024
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>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0024N18
          Length = 128739

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 434   cgggtcggagtcgtggcagtccatgtagtcca 465
             |||||||||||||  |||||||||||||||||
Sbjct: 11656 cgggtcggagtcgacgcagtccatgtagtcca 11687



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 434   cgggtcggagtcgtggcagtccatgtagtcca 465
             |||||||||||||  |||||||||| ||||||
Sbjct: 17645 cgggtcggagtcgacgcagtccatgaagtcca 17676
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>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0537F07
          Length = 147724

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 434   cgggtcggagtcgtggcagtccatgtagtcca 465
             |||||||||||||  |||||||||||||||||
Sbjct: 90779 cgggtcggagtcgacgcagtccatgtagtcca 90810



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 434   cgggtcggagtcgtggcagtccatgtagtcca 465
             |||||||||||||  |||||||||| ||||||
Sbjct: 96768 cgggtcggagtcgacgcagtccatgaagtcca 96799
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>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full
           insert sequence
          Length = 1517

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 434 cgggtcggagtcgtggcagtccatgtagtcca 465
           |||||||||||||  |||||||||||||||||
Sbjct: 904 cgggtcggagtcgacgcagtccatgtagtcca 873
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>ref|XM_648008.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (94.t00028)
            partial mRNA
          Length = 1644

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 41   caatatatggatcaatcattatttatg 67
            ||||||||| |||||||||||||||||
Sbjct: 1264 caatatatgaatcaatcattatttatg 1290
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>ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680
            (OPR1) transcript variant AT1G76680.2 mRNA, complete cds
          Length = 1460

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 94   gggtagtcggtgtaaccgacgacgggatc 122
            ||||| ||||||||||||||||| |||||
Sbjct: 1242 gggtaatcggtgtaaccgacgactggatc 1214
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>ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680
            (OPR1) transcript variant AT1G76680.1 mRNA, complete cds
          Length = 1451

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 94   gggtagtcggtgtaaccgacgacgggatc 122
            ||||| ||||||||||||||||| |||||
Sbjct: 1233 gggtaatcggtgtaaccgacgactggatc 1205
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>gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds
          Length = 1119

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 94   gggtagtcggtgtaaccgacgacgggatc 122
            ||||| ||||||||||||||||| |||||
Sbjct: 1097 gggtaatcggtgtaaccgacgactggatc 1069
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>emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate reductase
          Length = 1311

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 94   gggtagtcggtgtaaccgacgacgggatc 122
            ||||| ||||||||||||||||| |||||
Sbjct: 1162 gggtaatcggtgtaaccgacgactggatc 1134
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>gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, complete cds
          Length = 1252

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 94   gggtagtcggtgtaaccgacgacgggatc 122
            ||||| ||||||||||||||||| |||||
Sbjct: 1167 gggtaatcggtgtaaccgacgactggatc 1139
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>gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28O16 genomic sequence, complete
             sequence
          Length = 87684

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 94    gggtagtcggtgtaaccgacgacgggatc 122
             ||||| ||||||||||||||||| |||||
Sbjct: 15021 gggtaatcggtgtaaccgacgactggatc 14993
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>gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete sequence
          Length = 1280

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 94   gggtagtcggtgtaaccgacgacgggatc 122
            ||||| ||||||||||||||||| |||||
Sbjct: 1167 gggtaatcggtgtaaccgacgactggatc 1139
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>gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate reductase OPR1 and
            12-oxophytodienoate reductase OPR2 genes, complete cds
          Length = 7079

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 94   gggtagtcggtgtaaccgacgacgggatc 122
            ||||| ||||||||||||||||| |||||
Sbjct: 4615 gggtaatcggtgtaaccgacgactggatc 4587
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>dbj|AB030705.1| Lithospermum erythrorhizon mRNA for LEDI-5a protein, complete cds
          Length = 1454

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 87   aagaaacgggtagtcggtgtaaccgacgacggg 119
            |||||| |||||||||||||| ||||| |||||
Sbjct: 1139 aagaaatgggtagtcggtgtagccgacaacggg 1107
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>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete cds
          Length = 1594

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 96   gtagtcggtgtaaccgacgacggg 119
            |||||| |||||||||||||||||
Sbjct: 1400 gtagtccgtgtaaccgacgacggg 1377
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>gb|AC165353.4| Mus musculus BAC clone RP23-167C2 from chromosome 3, complete sequence
          Length = 198393

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    aagaaaaggttccatttgat 30
             ||||||||||||||||||||
Sbjct: 24462 aagaaaaggttccatttgat 24443
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    gggcagcagcctgtgcggca 330
              ||||||||||||||||||||
Sbjct: 983671 gggcagcagcctgtgcggca 983690
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>ref|XM_746355.1| Aspergillus fumigatus Af293 multidrug resistant protein
           (Afu4g13830) partial mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 278 tgcaatgaaggtgcccttgaaggc 301
           |||||||||||||||| |||||||
Sbjct: 264 tgcaatgaaggtgcccatgaaggc 241
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>gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosome 7, complete sequence
          Length = 199810

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    tggttcaatgacacatcaag 85
             ||||||||||||||||||||
Sbjct: 70383 tggttcaatgacacatcaag 70364
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>gb|AF098985.2| Caenorhabditis elegans cosmid C08G5, complete sequence
          Length = 40550

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     aaaaagaaaaggttccattt 27
             ||||||||||||||||||||
Sbjct: 38262 aaaaagaaaaggttccattt 38281
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>emb|AL589846.5| Human DNA sequence from clone RP11-199O16 on chromosome 9, complete
             sequence
          Length = 44495

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    ttttcacatggcaatatatg 49
             ||||||||||||||||||||
Sbjct: 17566 ttttcacatggcaatatatg 17547
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>emb|AL121770.1|SPAC821 S.pombe chromosome I cosmid c821
          Length = 35452

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   catcctgttgtacttattaa 157
             ||||||||||||||||||||
Sbjct: 33192 catcctgttgtacttattaa 33173
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 241     ccgccttgtccccctcttcc 260
               ||||||||||||||||||||
Sbjct: 4004811 ccgccttgtccccctcttcc 4004830
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>gb|AE005923.1| Caulobacter crescentus CB15 section 249 of 359 of the complete genome
          Length = 6158

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 394  ggtcattgagcttcgtggccatgtggaggccg 425
            |||||||||||||| ||||| ||| |||||||
Sbjct: 4657 ggtcattgagcttcatggccttgtagaggccg 4688
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>gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, complete sequence
          Length = 170311

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      agaaaaagaaaaggttccat 25
              ||||||||||||||||||||
Sbjct: 101167 agaaaaagaaaaggttccat 101186
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>gb|AC048362.14| Mus musculus, clone RP23-105E2, complete sequence
          Length = 209211

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aaaaagaaaaggttccattt 27
             ||||||||||||||||||||
Sbjct: 84547 aaaaagaaaaggttccattt 84528
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>ref|NM_061403.1| Caenorhabditis elegans C08G5.6 (C08G5.6) mRNA, complete cds
          Length = 921

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   aaaaagaaaaggttccattt 27
           ||||||||||||||||||||
Sbjct: 770 aaaaagaaaaggttccattt 789
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>emb|BX934911.1| Gallus gallus finished cDNA, clone ChEST150h3
          Length = 1240

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 325 gcggcaccacccgccggccg 344
           ||||||||||||||||||||
Sbjct: 72  gcggcaccacccgccggccg 53
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>gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana BAC F17F8 from chromosome I,
             complete sequence
          Length = 102393

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 44    tatatggatcaatcattatttatg 67
             ||||||||| ||||||||||||||
Sbjct: 27805 tatatggatgaatcattatttatg 27828
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>emb|AL845323.18| Mouse DNA sequence from clone RP23-304D11 on chromosome 2, complete
             sequence
          Length = 228137

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   ctgtagggcagcagcctgtg 325
             ||||||||||||||||||||
Sbjct: 68961 ctgtagggcagcagcctgtg 68980
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>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full
           insert sequence
          Length = 1281

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 434 cgggtcggagtcgtggcagtccatgtagtcca 465
           |||||||||||||  |||||||||| ||||||
Sbjct: 826 cgggtcggagtcgacgcagtccatgaagtcca 795
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>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full
           insert sequence
          Length = 1281

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 434 cgggtcggagtcgtggcagtccatgtagtcca 465
           |||||||||||||  |||||||||| ||||||
Sbjct: 826 cgggtcggagtcgacgcagtccatgaagtcca 795
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>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full
           insert sequence
          Length = 1422

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 434 cgggtcggagtcgtggcagtccatgtagtcca 465
           |||||||||||||  |||||||||| ||||||
Sbjct: 821 cgggtcggagtcgacgcagtccatgaagtcca 790
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>gb|AF099188.1|AF099188 Caulobacter crescentus cell division protein DivB (divB) gene,
            complete cds; and MurG (murG) gene, partial cds
          Length = 2475

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 394  ggtcattgagcttcgtggccatgtggaggccg 425
            |||||||||||||| ||||| ||| |||||||
Sbjct: 1301 ggtcattgagcttcatggccttgtagaggccg 1270
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>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full
           insert sequence
          Length = 1434

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 434 cgggtcggagtcgtggcagtccatgtagtcca 465
           |||||||||||||  |||||||||| ||||||
Sbjct: 826 cgggtcggagtcgacgcagtccatgaagtcca 795
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>gb|AY106967.1| Zea mays PCO088243 mRNA sequence
          Length = 765

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 96  gtagtcggtgtaaccgacgacggg 119
           |||||| |||||||||||||||||
Sbjct: 571 gtagtccgtgtaaccgacgacggg 548
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>gb|AF009512.1|AF009512 Schizosaccharomyces pombe protein kinase Orb6p (orb6) gene, complete
            cds
          Length = 2344

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  catcctgttgtacttattaa 157
            ||||||||||||||||||||
Sbjct: 2289 catcctgttgtacttattaa 2270
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>gb|AC161251.3| Mus musculus BAC clone RP24-174C13 from chromosome 3, complete sequence
          Length = 151247

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    aagaaaaggttccatttgat 30
             ||||||||||||||||||||
Sbjct: 37228 aagaaaaggttccatttgat 37247
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>gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complete sequence
          Length = 190414

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     tggttcaatgacacatcaag 85
              ||||||||||||||||||||
Sbjct: 156206 tggttcaatgacacatcaag 156187
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>emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chromosome 4, complete
              sequence
          Length = 186686

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    atgaaggtgcccttgaaggc 301
              ||||||||||||||||||||
Sbjct: 183740 atgaaggtgcccttgaaggc 183721


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,171,851
Number of Sequences: 3902068
Number of extensions: 4171851
Number of successful extensions: 81642
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81416
Number of HSP's gapped (non-prelim): 218
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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