Clone Name	rbart33d02
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1	67	3e-11
2	YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c i...	57	5e-08
3	ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (E...	52	9e-07
4	ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2	52	9e-07
5	ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (E...	52	9e-07
6	ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalo...	52	1e-06
7	SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-a...	52	1e-06
8	ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encepha...	52	1e-06
9	ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)	52	1e-06
10	ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encepha...	52	1e-06
11	ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)	51	2e-06
12	ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (E...	51	3e-06
13	ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)	50	4e-06
14	ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (P...	50	4e-06
15	RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Co...	50	4e-06
16	RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (He...	50	4e-06
17	RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-bindin...	49	1e-05
18	NSR1_YEAST (P27476) Nuclear localization sequence-binding protei...	49	1e-05
19	YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5	48	2e-05
20	ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precur...	48	2e-05
21	PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-b...	48	2e-05
22	ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visu...	48	2e-05
23	ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visu...	48	2e-05
24	RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif p...	48	2e-05
25	SXL_MEGSC (O01671) Sex-lethal homolog	48	2e-05
26	RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HS...	48	2e-05
27	CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit...	47	3e-05
28	CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit...	47	3e-05
29	EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (...	47	3e-05
30	CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit...	47	4e-05
31	RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 h...	47	4e-05
32	ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloro...	47	4e-05
33	CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit...	47	4e-05
34	PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-bindi...	47	4e-05
35	GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A	47	4e-05
36	CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit...	47	4e-05
37	CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit...	47	4e-05
38	MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phos...	47	5e-05
39	RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ss...	47	5e-05
40	NCBP2_MOUSE (Q9CQ49) Nuclear cap-binding protein subunit 2 (20 k...	46	6e-05
41	NCBP2_HUMAN (P52298) Nuclear cap-binding protein subunit 2 (20 k...	46	6e-05
42	NCBP2_BOVIN (Q3ZBJ1) Nuclear cap-binding protein subunit 2	46	6e-05
43	MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phos...	46	6e-05
44	EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (...	46	6e-05
45	GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7	46	6e-05
46	GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochon...	46	8e-05
47	PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-...	46	8e-05
48	GAR2_SCHPO (P41891) Protein gar2	46	8e-05
49	EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Emb...	46	8e-05
50	DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autoso...	45	1e-04
51	GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A	45	1e-04
52	DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autoso...	45	1e-04
53	DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autoso...	45	1e-04
54	RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA	45	1e-04
55	ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast prec...	45	1e-04
56	ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precur...	45	1e-04
57	RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa ho...	45	1e-04
58	PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a...	45	1e-04
59	ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/...	45	1e-04
60	PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-bind...	45	1e-04
61	PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-bi...	45	1e-04
62	PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-bi...	45	1e-04
63	PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-bi...	45	1e-04
64	ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast prec...	45	1e-04
65	PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-bi...	45	1e-04
66	ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/...	45	1e-04
67	PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-...	45	1e-04
68	SGN1_YEAST (P40561) RNA-binding protein SGN1	45	1e-04
69	SAP49_SCHPO (O14102) Spliceosome-associated protein 49	45	1e-04
70	TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding p...	45	1e-04
71	DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4	45	2e-04
72	RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif pro...	45	2e-04
73	TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)	45	2e-04
74	DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2	45	2e-04
75	RB97D_DROME (Q02926) Ribonucleoprotein RB97D	45	2e-04
76	DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3	45	2e-04
77	DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1	45	2e-04
78	SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)	44	2e-04
79	SXL_MUSDO (O17310) Sex-lethal homolog	44	2e-04
80	ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (...	44	2e-04
81	ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor	44	2e-04
82	MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phos...	44	2e-04
83	RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial pre...	44	3e-04
84	TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)	44	3e-04
85	RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding ...	44	3e-04
86	RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15	44	3e-04
87	DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autoso...	44	3e-04
88	TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)	44	3e-04
89	SXL_CHRRU (O97018) Sex-lethal homolog	44	4e-04
90	PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-bi...	44	4e-04
91	RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2	44	4e-04
92	RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding ...	44	4e-04
93	GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2	44	4e-04
94	ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precur...	43	5e-04
95	RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F...	43	5e-04
96	GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-indu...	43	5e-04
97	RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2	43	7e-04
98	ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)	42	9e-04
99	ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (...	42	9e-04
100	SXL_DROSU (Q24668) Protein sex-lethal	42	9e-04
101	SXL_DROME (P19339) Protein sex-lethal	42	9e-04
102	GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein	42	9e-04
103	RBM8A_MOUSE (Q9CWZ3) RNA-binding protein 8A (RNA-binding motif p...	42	9e-04
104	RBM8A_HUMAN (Q9Y5S9) RNA-binding protein 8A (RNA-binding motif p...	42	9e-04
105	FCA_ARATH (O04425) Flowering time control protein FCA	42	0.001
106	CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine...	42	0.002
107	ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precur...	41	0.002
108	PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-bi...	41	0.002
109	PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-bi...	41	0.002
110	PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-bi...	41	0.002
111	PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-bi...	41	0.002
112	PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-bi...	41	0.002
113	PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-bi...	41	0.002
114	CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-r...	41	0.002
115	CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine...	41	0.002
116	CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine...	41	0.002
117	CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine...	41	0.002
118	CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine...	41	0.002
119	RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-ri...	41	0.002
120	DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in azoosp...	41	0.003
121	PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-bi...	41	0.003
122	DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)	41	0.003
123	ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, ...	41	0.003
124	DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in azoosp...	41	0.003
125	NOP12_CANGA (Q6FUS6) Nucleolar protein 12	40	0.003
126	BOLL_MOUSE (Q924M5) Protein boule-like	40	0.003
127	U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 aux...	40	0.003
128	U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 aux...	40	0.003
129	PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g...	40	0.003
130	DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in azoosp...	40	0.003
131	GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)	40	0.003
132	CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcrip...	40	0.004
133	NOP12_ASHGO (Q75BJ7) Nucleolar protein 12	40	0.004
134	YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 i...	40	0.006
135	NOP12_YARLI (Q6C2Q7) Nucleolar protein 12	40	0.006
136	PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-bi...	39	0.010
137	MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musa...	39	0.010
138	MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musa...	39	0.010
139	NOP12_YEAST (Q08208) Nucleolar protein 12	39	0.010
140	U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 aux...	39	0.010
141	HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4...	39	0.010
142	NCBP2_XENLA (P52299) Nuclear cap binding protein subunit 2 (20 k...	39	0.010
143	BOLL_MACFA (Q8WP23) Protein boule-like	39	0.010
144	BOLL_HUMAN (Q8N9W6) Protein boule-like	39	0.010
145	NOP12_KLULA (Q6CKV6) Nucleolar protein 12	39	0.010
146	GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 pro...	39	0.010
147	DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1	39	0.010
148	GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10	39	0.013
149	DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding prote...	39	0.013
150	PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-bi...	39	0.013
151	YHH5_YEAST (P38760) Hypothetical 75.9 kDa protein in SPO13-ARG4 ...	39	0.013
152	RBM7_MOUSE (Q9CQT2) RNA-binding protein 7 (RNA-binding motif pro...	38	0.022
153	MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phos...	37	0.029
154	NAM8_YEAST (Q00539) Protein NAM8	37	0.029
155	DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding prote...	37	0.029
156	RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interact...	37	0.029
157	RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interact...	37	0.029
158	RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U...	37	0.038
159	ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precur...	37	0.038
160	PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-bindi...	37	0.038
161	RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)	37	0.038
162	PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (6...	37	0.049
163	RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U...	37	0.049
164	RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interact...	37	0.049
165	RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, ch...	36	0.064
166	YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 i...	36	0.064
167	HSH49_YEAST (Q99181) Protein HSH49	36	0.064
168	G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protei...	36	0.084
169	G3B2_HUMAN (Q9UN86) Ras-GTPase-activating protein-binding protei...	36	0.084
170	MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musash...	36	0.084
171	MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musa...	36	0.084
172	MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musa...	36	0.084
173	PES4_YEAST (P39684) Protein PES4 (DNA polymerase epsilon suppres...	35	0.11
174	MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phos...	35	0.11
175	RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interact...	35	0.11
176	RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif pro...	35	0.14
177	MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing prote...	35	0.14
178	U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 aux...	35	0.14
179	U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 aux...	35	0.14
180	RSD1_SCHPO (O13845) RNA-binding protein rsd1	35	0.14
181	RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C...	35	0.14
182	RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif pro...	35	0.14
183	IF34_SCHPO (P78795) Probable eukaryotic translation initiation f...	35	0.19
184	IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 s...	35	0.19
185	IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 s...	35	0.19
186	RNP24_SCHPO (Q09100) RNA-binding protein rnp24	35	0.19
187	IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SN...	35	0.19
188	ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1 (...	34	0.24
189	ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B ...	34	0.24
190	ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1 (He...	34	0.24
191	ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1 (...	34	0.24
192	ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1 (...	34	0.24
193	RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 h...	34	0.24
194	RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 h...	34	0.24
195	NOP12_CANAL (Q5AHI7) Nucleolar protein 12	34	0.24
196	ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1 (...	34	0.24
197	NUCL_PONPY (Q5RF26) Nucleolin	34	0.32
198	NUCL_HUMAN (P19338) Nucleolin (Protein C23)	34	0.32
199	IF39_YEAST (P06103) Eukaryotic translation initiation factor 3 9...	34	0.32
200	NUCL_MACFA (Q4R4J7) Nucleolin	34	0.32
201	RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-bindin...	34	0.32
202	PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 ...	34	0.32
203	NUCL_MESAU (P08199) Nucleolin (Protein C23)	33	0.42
204	ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B ...	33	0.42
205	RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-bindin...	33	0.42
206	ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (...	33	0.42
207	IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H ...	33	0.42
208	IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H ...	33	0.42
209	ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hn...	33	0.42
210	ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (...	33	0.42
211	RBM5_HUMAN (P52756) RNA-binding protein 5 (RNA-binding motif pro...	33	0.54
212	NOP12_DEBHA (Q6BTS9) Nucleolar protein 12	33	0.54
213	PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 ...	33	0.54
214	CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (C...	33	0.54
215	CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (C...	33	0.54
216	RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif p...	33	0.54
217	HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (...	33	0.54
218	PPIL4_SCHPO (Q9UUE4) Peptidyl-prolyl cis-trans isomerase cyp6 (E...	33	0.71
219	PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 ...	32	0.93
220	PPIL4_ASPOR (Q2U256) Peptidyl-prolyl cis-trans isomerase-like 4 ...	32	0.93
221	RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif p...	32	1.2
222	RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U...	32	1.2
223	PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 ...	32	1.2
224	ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1	32	1.2
225	RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U...	32	1.6
226	RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U...	32	1.6
227	HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (...	32	1.6
228	NUCL_MOUSE (P09405) Nucleolin (Protein C23)	32	1.6
229	TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)	31	2.1
230	TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)	31	2.1
231	NUCL_CHICK (P15771) Nucleolin (Protein C23)	31	2.1
232	HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hn...	31	2.1
233	TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)	31	2.1
234	TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)	31	2.1
235	PPIL4_GIBZE (Q4IE79) Peptidyl-prolyl cis-trans isomerase-like 4 ...	31	2.1
236	HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (...	31	2.1
237	NUCL_RAT (P13383) Nucleolin (Protein C23)	31	2.7
238	PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-bin...	31	2.7
239	RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 h...	31	2.7
240	RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1	31	2.7
241	MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog) (SMA...	30	3.5
242	RBM10_HUMAN (P98175) RNA-binding protein 10 (RNA-binding motif p...	30	3.5
243	PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 ...	30	3.5
244	ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 ...	30	3.5
245	MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing prote...	30	3.5
246	MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog) (SMA...	30	3.5
247	RBM10_RAT (P70501) RNA-binding protein 10 (RNA-binding motif pro...	30	3.5
248	HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 ...	30	3.5
249	HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 ...	30	3.5
250	NOP12_NEUCR (Q7S2L7) Nucleolar protein 12	30	4.6
251	PPIL4_MOUSE (Q9CXG3) Peptidyl-prolyl cis-trans isomerase-like 4 ...	30	6.0
252	PPIL4_HUMAN (Q8WUA2) Peptidyl-prolyl cis-trans isomerase-like 4 ...	30	6.0
253	SFRS6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pr...	30	6.0
254	BOULE_DROME (Q24207) Protein boule	30	6.0
255	NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NO...	30	6.0
256	RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1	29	7.9
257	RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1	29	7.9
258	RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1	29	7.9
259	RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1	29	7.9
260	RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain...	29	7.9
261	RAVR1_HUMAN (Q8IY67) Protein raver-1	29	7.9
262	LAML2_CAEEL (Q21313) Laminin-like protein K08C7.3 precursor	29	7.9
263	HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (h...	29	7.9
264	NOP12_GIBZE (Q4IQW0) Nucleolar protein 12	29	7.9
265	NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA...	29	7.9
266	NOP12_EMENI (Q5BDC8) Nucleolar protein 12	29	7.9

---

>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1|
          Length = 632

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQ--LQGYGFVEFASHAAAERVL 500
           TLW+GDL+ WMD  +I   +A+  E  +VK++R K +    L  Y FV+F+S AAAER L
Sbjct: 86  TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145

Query: 501 QTFNGQMMPNVELAYRLN 554
             +N  M+P     ++LN
Sbjct: 146 MKYNNTMIPGAHCTFKLN 163



 Score = 34.7 bits (78), Expect = 0.19
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           T+++G L   + E  +  CF   G   ++K+   K      G GFV+++  +AAE+ + T
Sbjct: 298 TVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGK------GCGFVQYSEKSAAEKAINT 351

Query: 507 FNGQMM--PNVELAYRLN 554
             G ++   ++ LA+  N
Sbjct: 352 MQGALVGTSHIRLAWGHN 369

---

>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome|
           II
          Length = 473

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 29/76 (38%), Positives = 44/76 (57%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           TLW+G+L+ W+ E +I   +   G+   VKLIR++ TG   GY FVEFAS   A   + +
Sbjct: 94  TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-S 152

Query: 507 FNGQMMPNVELAYRLN 554
            N + +P     ++LN
Sbjct: 153 MNNKPIPGTNHLFKLN 168



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANT-GEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           ++++GDL   ++E  +YS FA+     +S K++ D QT   +GYGFV F      +  L 
Sbjct: 187 SIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALA 246

Query: 504 TFNGQM 521
              GQ+
Sbjct: 247 EMQGQI 252

---

>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Mel-N1)
          Length = 360

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 27/67 (40%), Positives = 36/67 (53%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    L +  L   M +  + S F + GE +S KL+RDK TGQ  GYGFV +     AE+
Sbjct: 36  DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95

Query: 495 VLQTFNG 515
            + T NG
Sbjct: 96  AINTLNG 102



 Score = 38.9 bits (89), Expect = 0.010
 Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = +3

Query: 360 DENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPN--V 533
           DE+ ++  F   G   +VK+IRD  T + +G+GFV   ++  A   + + NG  + +  +
Sbjct: 289 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 348

Query: 534 ELAYRLN 554
           +++++ N
Sbjct: 349 QVSFKTN 355



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++  L   M +  +   F+  G   + +++ D+ TG  +G GF+ F     AE  ++  
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186

Query: 510 NGQMMP 527
           NGQ  P
Sbjct: 187 NGQKPP 192

---

>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2|
          Length = 359

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 27/67 (40%), Positives = 36/67 (53%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    L +  L   M +  + S F + GE +S KL+RDK TGQ  GYGFV +     AE+
Sbjct: 36  DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95

Query: 495 VLQTFNG 515
            + T NG
Sbjct: 96  AINTLNG 102



 Score = 38.9 bits (89), Expect = 0.010
 Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = +3

Query: 360 DENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPN--V 533
           DE+ ++  F   G   +VK+IRD  T + +G+GFV   ++  A   + + NG  + +  +
Sbjct: 288 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 347

Query: 534 ELAYRLN 554
           +++++ N
Sbjct: 348 QVSFKTN 354



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++  L   M +  +   F+  G   + +++ D+ TG  +G GF+ F     AE  ++  
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186

Query: 510 NGQMMP 527
           NGQ  P
Sbjct: 187 NGQKPP 192

---

>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Hel-N1)
          Length = 359

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 27/67 (40%), Positives = 36/67 (53%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    L +  L   M +  + S F + GE +S KL+RDK TGQ  GYGFV +     AE+
Sbjct: 36  DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95

Query: 495 VLQTFNG 515
            + T NG
Sbjct: 96  AINTLNG 102



 Score = 38.9 bits (89), Expect = 0.010
 Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = +3

Query: 360 DENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPN--V 533
           DE+ ++  F   G   +VK+IRD  T + +G+GFV   ++  A   + + NG  + +  +
Sbjct: 288 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 347

Query: 534 ELAYRLN 554
           +++++ N
Sbjct: 348 QVSFKTN 354



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++  L   M +  +   F+  G   + +++ D+ TG  +G GF+ F     AE  ++  
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186

Query: 510 NGQMMP 527
           NGQ  P
Sbjct: 187 NGQKPP 192

---

>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 373

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 27/67 (40%), Positives = 35/67 (52%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    L +  L   M +    S F + GE +S KL+RDK TGQ  GYGFV +     AE+
Sbjct: 36  DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95

Query: 495 VLQTFNG 515
            + T NG
Sbjct: 96  AINTLNG 102



 Score = 39.3 bits (90), Expect = 0.008
 Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = +3

Query: 360 DENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPN--V 533
           DE+ ++  F   G   +VK+IRD  T + +G+GFV   ++  A   + + NG  + +  +
Sbjct: 302 DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 361

Query: 534 ELAYRLN 554
           +++++ N
Sbjct: 362 QVSFKTN 368



 Score = 36.2 bits (82), Expect = 0.064
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++  L   M +  +   F+  G   + +++ D+ TG  +G GF+ F     AE  ++  
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186

Query: 510 NGQ 518
           NGQ
Sbjct: 187 NGQ 189

---

>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated|
           protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor
           SF3b 49 kDa subunit)
          Length = 424

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEF-QSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           ++IG+L   +DE  +Y  F+  G   Q+ K++RD  TG  +GY F+ FAS  A++  ++ 
Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query: 507 FNGQMMPN 530
            NGQ + N
Sbjct: 162 MNGQYLCN 169



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/62 (33%), Positives = 34/62 (54%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           T+++G L   + E  ++  F   G   +  + +D+ TGQ QGYGFVEF S   A+  ++ 
Sbjct: 14  TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73

Query: 507 FN 512
            N
Sbjct: 74  MN 75

---

>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 385

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 27/67 (40%), Positives = 35/67 (52%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    L +  L   M +    S F + GE +S KL+RDK TGQ  GYGFV +     AE+
Sbjct: 48  DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 107

Query: 495 VLQTFNG 515
            + T NG
Sbjct: 108 AINTLNG 114



 Score = 39.3 bits (90), Expect = 0.008
 Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = +3

Query: 360 DENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPN--V 533
           DE+ ++  F   G   +VK+IRD  T + +G+GFV   ++  A   + + NG  + +  +
Sbjct: 314 DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 373

Query: 534 ELAYRLN 554
           +++++ N
Sbjct: 374 QVSFKTN 380



 Score = 36.2 bits (82), Expect = 0.064
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++  L   M +  +   F+  G   + +++ D+ TG  +G GF+ F     AE  ++  
Sbjct: 139 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 198

Query: 510 NGQ 518
           NGQ
Sbjct: 199 NGQ 201

---

>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)|
          Length = 359

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 24/53 (45%), Positives = 32/53 (60%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNG 515
           M +  + S F + GE +S KL+RDK TGQ  GYGFV +     AE+ + T NG
Sbjct: 50  MTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 102



 Score = 38.9 bits (89), Expect = 0.010
 Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = +3

Query: 360 DENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPN--V 533
           DE+ ++  F   G   +VK+IRD  T + +G+GFV   ++  A   + + NG  + +  +
Sbjct: 288 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 347

Query: 534 ELAYRLN 554
           +++++ N
Sbjct: 348 QVSFKTN 354



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++  L   M +  +   F+  G   + +++ D+ TG  +G GF+ F     AE  ++  
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186

Query: 510 NGQMMP 527
           NGQ  P
Sbjct: 187 NGQKPP 192

---

>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 380

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 27/67 (40%), Positives = 35/67 (52%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    L +  L   M +    S F + GE +S KL+RDK TGQ  GYGFV +     AE+
Sbjct: 43  DSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102

Query: 495 VLQTFNG 515
            + T NG
Sbjct: 103 AINTLNG 109



 Score = 39.3 bits (90), Expect = 0.008
 Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = +3

Query: 360 DENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPN--V 533
           DE+ ++  F   G   +VK+IRD  T + +G+GFV   ++  A   + + NG  + +  +
Sbjct: 309 DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 368

Query: 534 ELAYRLN 554
           +++++ N
Sbjct: 369 QVSFKTN 375



 Score = 36.2 bits (82), Expect = 0.064
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++  L   M +  +   F+  G   + +++ D+ TG  +G GF+ F     AE  ++  
Sbjct: 134 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 193

Query: 510 NGQ 518
           NGQ
Sbjct: 194 NGQ 196

---

>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)|
          Length = 326

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 24/53 (45%), Positives = 33/53 (62%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNG 515
           M ++ + S F++ GE +S KLIRDK  G   GYGFV + +   AER + T NG
Sbjct: 31  MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG 83



 Score = 39.3 bits (90), Expect = 0.008
 Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++I +L    DE  ++  F   G   +VK+IRD  T + +G+GFV   ++  A   + + 
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305

Query: 510 NGQMMPN--VELAYRLN 554
           NG  + +  ++++++ N
Sbjct: 306 NGYRLGDKILQVSFKTN 322

---

>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like|
           generic protein) (MelG)
          Length = 326

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 24/53 (45%), Positives = 32/53 (60%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNG 515
           M +  + S F++ GE +S KLIRDK  G   GYGFV + +   AER + T NG
Sbjct: 31  MTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG 83



 Score = 38.1 bits (87), Expect = 0.017
 Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++I +L    DE  ++  F   G   +VK+IRD  T + +G+GFV   ++  +   + + 
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305

Query: 510 NGQMMPN--VELAYRLN 554
           NG  + +  ++++++ N
Sbjct: 306 NGYRLGDKILQVSFKTN 322

---

>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)|
          Length = 367

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 25/67 (37%), Positives = 37/67 (55%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    L +  L   M ++   S F + G+ +S KL+RDK TGQ  GYGFV ++    A++
Sbjct: 36  DSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADK 95

Query: 495 VLQTFNG 515
            + T NG
Sbjct: 96  AINTLNG 102



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 18/62 (29%), Positives = 34/62 (54%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++ +L    DE+ ++  F   G   +VK+IRD  T + +G+GFV   ++  A   + + 
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345

Query: 510 NG 515
           NG
Sbjct: 346 NG 347



 Score = 37.0 bits (84), Expect = 0.038
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++  L   M +  +   F+  G   + +++ D+ TG  +G GF+ F     AE  ++  
Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGL 186

Query: 510 NGQ 518
           NGQ
Sbjct: 187 NGQ 189

---

>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic|
           cerebellar degeneration-associated antigen)
           (Paraneoplastic limbic encephalitis antigen 21)
          Length = 367

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 25/67 (37%), Positives = 37/67 (55%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    L +  L   M ++   S F + G+ +S KL+RDK TGQ  GYGFV ++    A++
Sbjct: 36  DSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADK 95

Query: 495 VLQTFNG 515
            + T NG
Sbjct: 96  AINTLNG 102



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 18/62 (29%), Positives = 34/62 (54%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++ +L    DE+ ++  F   G   +VK+IRD  T + +G+GFV   ++  A   + + 
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345

Query: 510 NG 515
           NG
Sbjct: 346 NG 347



 Score = 36.2 bits (82), Expect = 0.064
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++  L   M +  +   F+  G   + +++ D+ TG  +G GF+ F     AE  ++  
Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186

Query: 510 NGQ 518
           NGQ
Sbjct: 187 NGQ 189

---

>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of|
           activating protein 1 and estrogen receptors)
           (Coactivator of AP-1 and ERs) (Transcription coactivator
           CAPER)
          Length = 530

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 20/62 (32%), Positives = 38/62 (61%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++G L + + E+ +   F   G  +S++L+ D +TG+ +GYGF+ F+    A++ L+  
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311

Query: 510 NG 515
           NG
Sbjct: 312 NG 313

---

>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular|
           carcinoma protein 1) (Splicing factor HCC1)
          Length = 530

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 20/62 (32%), Positives = 38/62 (61%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++G L + + E+ +   F   G  +S++L+ D +TG+ +GYGF+ F+    A++ L+  
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311

Query: 510 NG 515
           NG
Sbjct: 312 NG 313

---

>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein|
           23) (RNA-binding region-containing protein 4) (Splicing
           factor SF2)
          Length = 439

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 20/62 (32%), Positives = 36/62 (58%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++G L + + E+ +   F   G+  ++ L++D  TG+ +GYGF+ F+    A R L+  
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324

Query: 510 NG 515
           NG
Sbjct: 325 NG 326

---

>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)|
          Length = 414

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 23/73 (31%), Positives = 43/73 (58%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S+   TL++G+L +  D + I+  FA  GE  SV++    +T Q +G+G+V+F++   A+
Sbjct: 263 SEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAK 322

Query: 492 RVLQTFNGQMMPN 530
           + L    G+ + N
Sbjct: 323 KALDALQGEYIDN 335



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 18/69 (26%), Positives = 42/69 (60%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           ++E  T+++G L + +D+ ++   F + G     ++I ++ T + +GYG+V+F + + AE
Sbjct: 164 TEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAE 223

Query: 492 RVLQTFNGQ 518
           + +Q   G+
Sbjct: 224 KAIQEMQGK 232

---

>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSV-KLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +++G+L   +DE  +Y  F+  G    V K++RD  +G  +G+ F+ FAS  A++  L+ 
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161

Query: 507 FNGQMMPN 530
            NGQ + N
Sbjct: 162 MNGQFLCN 169



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           T+++G L   + E+ ++      G   SV + +D+ T   QG+GFVEF     A+  ++ 
Sbjct: 14  TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 73

Query: 507 FN 512
            N
Sbjct: 74  LN 75

---

>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein cp29)
          Length = 342

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 22/62 (35%), Positives = 37/62 (59%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++G+L + +D   +   F + G  + V++I DK TG+ +G+GFV  ++ A  E   Q F
Sbjct: 101 LFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQF 160

Query: 510 NG 515
           NG
Sbjct: 161 NG 162



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 16/62 (25%), Positives = 37/62 (59%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++G+L + +D+  + + F   G+    ++I D+ +G+ +G+GFV  +S    ++ + + 
Sbjct: 259 LYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSL 318

Query: 510 NG 515
           NG
Sbjct: 319 NG 320

---

>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein|
           PUB1 (ARS consensus-binding protein ACBP-60)
           (Poly(U)-binding protein) (Poly uridylate-binding
           protein)
          Length = 452

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 23/69 (33%), Positives = 38/69 (55%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           SD+   L++GDL   +D+  + + F +   + S  ++ D QTG  +GYGFV F S   A+
Sbjct: 157 SDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQ 216

Query: 492 RVLQTFNGQ 518
             + +  GQ
Sbjct: 217 NAMDSMQGQ 225



 Score = 37.7 bits (86), Expect = 0.022
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = +3

Query: 324 RTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           R L++G+L   + E+ +   F   G   ++K++ DK    +  Y FVE+     A   LQ
Sbjct: 74  RVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVN-YAFVEYHQSHDANIALQ 132

Query: 504 TFNGQMMPN 530
           T NG+ + N
Sbjct: 133 TLNGKQIEN 141

---

>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)|
          Length = 483

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
 Frame = +3

Query: 312 SDEVRT-LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDK-------------QTGQLQ 449
           S E RT L +  L   M E+ I S F++ GE +SVKLIRDK               GQ  
Sbjct: 144 STETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSL 203

Query: 450 GYGFVEFASHAAAERVLQTFNGQMMPN 530
           GYGFV +     AE+ +   NG  + N
Sbjct: 204 GYGFVNYVRPQDAEQAVNVLNGLRLQN 230



 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++I +L    +E  ++  F   G  QSVK+++D  T Q +GYGFV   ++  A   ++  
Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 463

Query: 510 NGQMMPN--VELAYRLN 554
           NG  M N  ++++++ N
Sbjct: 464 NGYTMGNRVLQVSFKTN 480

---

>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)|
          Length = 519

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
 Frame = +3

Query: 312 SDEVRT-LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDK-------------QTGQLQ 449
           S E RT L +  L   M E+ I S F++ GE +SVKLIRDK               GQ  
Sbjct: 180 STETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSL 239

Query: 450 GYGFVEFASHAAAERVLQTFNGQMMPN 530
           GYGFV +     AE+ +   NG  + N
Sbjct: 240 GYGFVNYVRPQDAEQAVNVLNGLRLQN 266



 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++I +L    +E  ++  F   G  QSVK+++D  T Q +GYGFV   ++  A   ++  
Sbjct: 440 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 499

Query: 510 NGQMMPN--VELAYRLN 554
           NG  M N  ++++++ N
Sbjct: 500 NGYTMGNRVLQVSFKTN 516

---

>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 430

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 22/71 (30%), Positives = 44/71 (61%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S + R++++G+L Y ++E+ I   F + G   +V+++RDK TG  +G+G+V F +  +  
Sbjct: 283 SRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVH 342

Query: 492 RVLQTFNGQMM 524
             L+  N ++M
Sbjct: 343 LALKLNNSELM 353

---

>SXL_MEGSC (O01671) Sex-lethal homolog|
          Length = 321

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 22/58 (37%), Positives = 32/58 (55%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPN 530
           M +  +YS F   G   + +++RD +TG   GYGFV+F S A A R +   NG  + N
Sbjct: 89  MQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRN 146

---

>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA|
           binding protein SEB4) (CLL-associated antigen KW-5)
          Length = 216

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++G L Y   +  +   F   G+ +   +I D+QTG+ +GYGFV  A  AAAER  +  
Sbjct: 13  IFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDP 72

Query: 510 N---GQMMPNVELAY 545
           N        NV LAY
Sbjct: 73  NPIIDGRKANVNLAY 87

---

>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 632

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 19/66 (28%), Positives = 38/66 (57%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           +R++++G++ Y   E  +   F+  G   S +L+ D++TG+ +GYGF E+     A   +
Sbjct: 15  LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74

Query: 501 QTFNGQ 518
           +  NG+
Sbjct: 75  RNLNGR 80

---

>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 616

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 19/66 (28%), Positives = 38/66 (57%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           +R++++G++ Y   E  +   F+  G   S +L+ D++TG+ +GYGF E+     A   +
Sbjct: 15  LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74

Query: 501 QTFNGQ 518
           +  NG+
Sbjct: 75  RNLNGR 80

---

>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic|
           poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A)
          Length = 629

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 24/68 (35%), Positives = 38/68 (55%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   +Y  F+  G   S K++ D+   +  GYGFV F +H AA R +
Sbjct: 98  VGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSR--GYGFVHFETHEAANRAI 155

Query: 501 QTFNGQMM 524
           QT NG ++
Sbjct: 156 QTMNGMLL 163



 Score = 38.1 bits (87), Expect = 0.017
 Identities = 19/67 (28%), Positives = 37/67 (55%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E   ++I +    MD+  +   F+  G   SVK++ D  +G+ +G+GFV + +H  A++ 
Sbjct: 189 EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKA 247

Query: 498 LQTFNGQ 518
           +   NG+
Sbjct: 248 VSEMNGK 254



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   +D++ +   F   G   S K++ +   G  +G+GFV F+S   A + +   
Sbjct: 296 LYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEM 353

Query: 510 NGQMM 524
           NG+++
Sbjct: 354 NGRIV 358

---

>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 580

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 19/66 (28%), Positives = 38/66 (57%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           +R++++G++ Y   E  +   F+  G   S +L+ D++TG+ +GYGF E+     A   +
Sbjct: 15  LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74

Query: 501 QTFNGQ 518
           +  NG+
Sbjct: 75  RNLNGR 80

---

>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2|
           (hnRNP A2(B))
          Length = 358

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V+ L++G ++   +E+++   F   G+ +S ++I DKQ+G+ +G+GFV F  H   ++++
Sbjct: 99  VKKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIV 158

Query: 501 ----QTFNG 515
                T NG
Sbjct: 159 LQKYHTING 167



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFA 473
           ++ R L+IG L +   E  + + +   G+     ++RD  + + +G+GFV F+
Sbjct: 6   EQFRKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFS 58

---

>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast|
           precursor
          Length = 289

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 22/62 (35%), Positives = 37/62 (59%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++G+L + +D   +   F + G  + V++I DK TG+ +G+GFV  +S +  E   Q F
Sbjct: 93  LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152

Query: 510 NG 515
           NG
Sbjct: 153 NG 154

---

>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 572

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 19/66 (28%), Positives = 38/66 (57%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           +R++++G++ Y   E  +   F+  G   S +L+ D++TG+ +GYGF E+     A   +
Sbjct: 15  LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74

Query: 501 QTFNGQ 518
           +  NG+
Sbjct: 75  RNLNGR 80

---

>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 634

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 23/68 (33%), Positives = 40/68 (58%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++GDL   ++E+ ++  F++ G   S+++ RD  T +  GY +V F   A AER L T
Sbjct: 3   SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62

Query: 507 FNGQMMPN 530
            N  ++ N
Sbjct: 63  MNFDLVRN 70



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 22/68 (32%), Positives = 35/68 (51%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   IY  F+  G   S K+  D++ G  +GYGFV F +  AA   +
Sbjct: 89  VGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEK-GNSKGYGFVHFETEEAANTSI 147

Query: 501 QTFNGQMM 524
              NG ++
Sbjct: 148 DKVNGMLL 155



 Score = 35.8 bits (81), Expect = 0.084
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = +3

Query: 360 DENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMM 524
           D+  +   F   G+  S K++  K+ G+ +G+GFV F +  AAE  +Q  NG+ M
Sbjct: 195 DDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQALNGKDM 248



 Score = 32.3 bits (72), Expect = 0.93
 Identities = 17/65 (26%), Positives = 38/65 (58%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   +D++ +   F+  G   S K++ D++ G+ +G+GFV F + + A   +   
Sbjct: 289 LYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTEL 347

Query: 510 NGQMM 524
           NG+++
Sbjct: 348 NGRVV 352

---

>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A|
          Length = 169

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 20/62 (32%), Positives = 36/62 (58%)
 Frame = +3

Query: 333 WIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFN 512
           ++G L +  DE  + + F+  GE    K+I D++TG+ +G+GFV F    + +  ++  N
Sbjct: 11  FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70

Query: 513 GQ 518
           GQ
Sbjct: 71  GQ 72

---

>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 19/66 (28%), Positives = 38/66 (57%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           +R++++G++ Y   E  +   F+  G   S +L+ D++TG+ +GYGF E+     A   +
Sbjct: 15  LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74

Query: 501 QTFNGQ 518
           +  NG+
Sbjct: 75  RNLNGR 80

---

>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 19/66 (28%), Positives = 38/66 (57%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           +R++++G++ Y   E  +   F+  G   S +L+ D++TG+ +GYGF E+     A   +
Sbjct: 15  LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAM 74

Query: 501 QTFNGQ 518
           +  NG+
Sbjct: 75  RNLNGR 80

---

>MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (mNIFK)
          Length = 317

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 22/64 (34%), Positives = 37/64 (57%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++G L   + E++IY+  A  G+    +L R K+TG  +GY FVEF S   A+ V +T 
Sbjct: 49  VYLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETM 108

Query: 510 NGQM 521
           +  +
Sbjct: 109 DNYL 112

---

>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding|
           protein SEB4)
          Length = 237

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++G L Y   +  +   F   G+ +   +I D+QTG+ +GYGFV  A  AAA+R  +  
Sbjct: 34  IFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKDP 93

Query: 510 N---GQMMPNVELAY 545
           N        NV LAY
Sbjct: 94  NPIIDGRKANVNLAY 108

---

>NCBP2_MOUSE (Q9CQ49) Nuclear cap-binding protein subunit 2 (20 kDa nuclear|
           cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
          Length = 156

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 21/63 (33%), Positives = 36/63 (57%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           TL++G+L ++  E  IY  F+ +G+ + + +  DK      G+ FVE+ S A AE  ++ 
Sbjct: 41  TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100

Query: 507 FNG 515
            NG
Sbjct: 101 ING 103

---

>NCBP2_HUMAN (P52298) Nuclear cap-binding protein subunit 2 (20 kDa nuclear|
           cap-binding protein) (NCBP 20 kDa subunit) (CBP20)
           (NCBP-interacting protein 1) (NIP1) (Cell
           proliferation-inducing gene 55 protein)
          Length = 156

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 21/63 (33%), Positives = 36/63 (57%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           TL++G+L ++  E  IY  F+ +G+ + + +  DK      G+ FVE+ S A AE  ++ 
Sbjct: 41  TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100

Query: 507 FNG 515
            NG
Sbjct: 101 ING 103

---

>NCBP2_BOVIN (Q3ZBJ1) Nuclear cap-binding protein subunit 2|
          Length = 156

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 21/63 (33%), Positives = 36/63 (57%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           TL++G+L ++  E  IY  F+ +G+ + + +  DK      G+ FVE+ S A AE  ++ 
Sbjct: 41  TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100

Query: 507 FNG 515
            NG
Sbjct: 101 ING 103

---

>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34)
          Length = 293

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 23/64 (35%), Positives = 35/64 (54%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++  L   +DE  I+S F+  G     +L R K+TG  +GY FVEF S   A+ V +T 
Sbjct: 47  VYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETM 106

Query: 510 NGQM 521
           N  +
Sbjct: 107 NNYL 110

---

>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic|
           poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B)
          Length = 629

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 23/66 (34%), Positives = 37/66 (56%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L+IGDL   + E  +Y  F+  G   S+++ RD  T +  GY ++ F   A AER L T
Sbjct: 12  SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71

Query: 507 FNGQMM 524
            N +++
Sbjct: 72  MNFEVI 77



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 23/68 (33%), Positives = 38/68 (55%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   +Y  F+  G+  S K++ D+   +  GYGFV F +  AA R +
Sbjct: 98  VGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSR--GYGFVHFETQEAANRAI 155

Query: 501 QTFNGQMM 524
           QT NG ++
Sbjct: 156 QTMNGMLL 163



 Score = 37.7 bits (86), Expect = 0.022
 Identities = 19/67 (28%), Positives = 37/67 (55%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E   ++I +    MD+  +   F+  G   SVK++ D  +G+ +G+GFV + +H  A++ 
Sbjct: 189 EFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKA 247

Query: 498 LQTFNGQ 518
           +   NG+
Sbjct: 248 VTEMNGK 254



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/65 (26%), Positives = 36/65 (55%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   +D++ +   F+  G   S K++ +   G  +G+GFV F+S   A + +   
Sbjct: 296 LYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG--GHSKGFGFVCFSSPEEATKAVTEM 353

Query: 510 NGQMM 524
           NG+++
Sbjct: 354 NGRIV 358

---

>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7|
          Length = 176

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 20/62 (32%), Positives = 36/62 (58%)
 Frame = +3

Query: 333 WIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFN 512
           ++G L +  D+  + + FA  G+    K+I D++TG+ +G+GFV F    A +  ++  N
Sbjct: 11  FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70

Query: 513 GQ 518
           GQ
Sbjct: 71  GQ 72

---

>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial|
           precursor (AtGRP2)
          Length = 158

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 21/63 (33%), Positives = 36/63 (57%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L+IG L +  D+  +   FA+ G+    K+I D++TG+ +G+GFV F    AA   +   
Sbjct: 37  LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96

Query: 510 NGQ 518
           +G+
Sbjct: 97  DGK 99

---

>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein|
           1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A)
           (PABP 1-A) (xPABP1-A)
          Length = 633

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++GDL   + E  +Y  F+  G   S+++ RD  T +  GY +V F   A AER L T
Sbjct: 12  SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query: 507 FN 512
            N
Sbjct: 72  MN 73



 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 22/68 (32%), Positives = 36/68 (52%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   +Y  F+  G   S K++ D+   +  GYGFV F +  AAER +
Sbjct: 98  VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAI 155

Query: 501 QTFNGQMM 524
              NG ++
Sbjct: 156 DKMNGMLL 163



 Score = 35.8 bits (81), Expect = 0.084
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMM 524
           M++  +   F   G   SVK++ D   G+ +G+GFV F  H  A++ +   NG+ M
Sbjct: 202 MNDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDM 256



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   +D+  +   F   G   S K++ +   G+ +G+GFV F+S   A + +   
Sbjct: 296 LYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEM 353

Query: 510 NGQMM 524
           NG+++
Sbjct: 354 NGRIV 358

---

>GAR2_SCHPO (P41891) Protein gar2|
          Length = 500

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 21/71 (29%), Positives = 45/71 (63%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S+   T+++G+L +   E+ + + F   G+ QS++L  D Q+G+L+G+G+V F+   +A+
Sbjct: 362 SEPSDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAK 421

Query: 492 RVLQTFNGQMM 524
           + ++  NG  +
Sbjct: 422 KCVE-MNGHFI 431



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 19/60 (31%), Positives = 37/60 (61%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S+E  T+++G L + +D+ ++   F   G     ++I D Q+G+ +GYG+V+F +  AA+
Sbjct: 259 SNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAK 318

---

>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)|
           binding protein) (ePABP)
          Length = 629

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 22/66 (33%), Positives = 37/66 (56%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++GDL   + E  +Y  F+  G   S+++ RD  T +  GY ++ F   A AER L T
Sbjct: 12  SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71

Query: 507 FNGQMM 524
            N +++
Sbjct: 72  MNFEVI 77



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 23/68 (33%), Positives = 37/68 (54%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   +Y  F+  G   S K++ D+   +  GYGFV F +  AA R +
Sbjct: 98  VGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSR--GYGFVHFETQEAANRAI 155

Query: 501 QTFNGQMM 524
           QT NG ++
Sbjct: 156 QTMNGMLL 163



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 20/67 (29%), Positives = 37/67 (55%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E   ++I +    MD+  +   F+  G   SVK++ D  TG+ +G+GFV + +H  A++ 
Sbjct: 189 EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKA 247

Query: 498 LQTFNGQ 518
           +   NG+
Sbjct: 248 VSEMNGK 254



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/65 (26%), Positives = 36/65 (55%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   +D++ +   F+  G   S K++ +   G  +G+GFV F+S   A + +   
Sbjct: 296 LYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEM 353

Query: 510 NGQMM 524
           NG+++
Sbjct: 354 NGRIV 358

---

>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 298

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           T+++G +   MDE  I S FA  G  + VK+I D+ TG  +GYGFV F +    ++++++
Sbjct: 41  TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVES 99

Query: 507 ---FNGQMM 524
              F+G+ +
Sbjct: 100 QINFHGKKL 108

---

>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A|
          Length = 166

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 19/62 (30%), Positives = 36/62 (58%)
 Frame = +3

Query: 333 WIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFN 512
           ++G L +  D+  + + F+  GE    K+I D++TG+ +G+GFV F    + +  ++  N
Sbjct: 11  FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70

Query: 513 GQ 518
           GQ
Sbjct: 71  GQ 72

---

>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 295

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           T+++G +   MDE  I S FA  G  + VK+I D+ TG  +GYGFV F +    ++++++
Sbjct: 41  TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES 99

Query: 507 ---FNGQMM 524
              F+G+ +
Sbjct: 100 QINFHGKKL 108

---

>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1) (DAZ homolog)
           (SPGY-like-autosomal)
          Length = 295

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           T+++G +   MDE  I S FA  G  + VK+I D+ TG  +GYGFV F +    ++++++
Sbjct: 41  TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES 99

Query: 507 ---FNGQMM 524
              F+G+ +
Sbjct: 100 QINFHGKKL 108

---

>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA|
          Length = 101

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 19/63 (30%), Positives = 39/63 (61%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           ++++G+L Y + E  + + FA  G  + V+L  D++TG+++G+GFVE  + A     ++ 
Sbjct: 2   SIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEA 61

Query: 507 FNG 515
            +G
Sbjct: 62  LDG 64

---

>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)|
          Length = 273

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 21/62 (33%), Positives = 34/62 (54%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++G+L +  D   +   F   G  + V++I DK TG+ +G+GFV  +S    E   Q F
Sbjct: 89  IFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148

Query: 510 NG 515
           NG
Sbjct: 149 NG 150

---

>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)|
          Length = 279

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/62 (33%), Positives = 34/62 (54%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++G+L +  D   +   F   G  + V++I DK TG+ +G+GFV  +S    E   Q F
Sbjct: 89  IFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148

Query: 510 NG 515
           NG
Sbjct: 149 NG 150

---

>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog|
          Length = 300

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 19/53 (35%), Positives = 33/53 (62%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEF 470
           +D  RT++IG L Y +DE  +   F   GE + +++++DK T + +GY F+ F
Sbjct: 103 TDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVF 155

---

>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 19/62 (30%), Positives = 34/62 (54%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++GDL+  + E ++Y  F+  G   S+++ RD  T    GY +V F  H A  + ++ 
Sbjct: 38  SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 97

Query: 507 FN 512
            N
Sbjct: 98  LN 99



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 20/70 (28%), Positives = 37/70 (52%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++I +L   +D   +Y  F+  G+  S K+  D + G+ +G+GFV F    AA+  +   
Sbjct: 127 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDAL 185

Query: 510 NGQMMPNVEL 539
           NG ++   E+
Sbjct: 186 NGMLLNGQEI 195

---

>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /|
           hnRNP B1)
          Length = 353

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 19/69 (27%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V+ L++G ++   +E+++   F   G+  ++++I D+Q+G+ +G+GFV F  H   ++++
Sbjct: 111 VKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 170

Query: 501 ----QTFNG 515
                T NG
Sbjct: 171 LQKYHTING 179



 Score = 34.3 bits (77), Expect = 0.24
 Identities = 16/62 (25%), Positives = 33/62 (53%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           ++ R L+IG L +   E  + + +   G+     ++RD  + + +G+GFV F+S A  + 
Sbjct: 18  EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 77

Query: 495 VL 500
            +
Sbjct: 78  AM 79

---

>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++GDL   + E  +Y  F+  G   S+++ RD  T +  GY +V F   A AER L T
Sbjct: 12  SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query: 507 FN 512
            N
Sbjct: 72  MN 73



 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 22/68 (32%), Positives = 37/68 (54%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   +Y  F+  G   S K++ D+   +  GYGFV F +  AAER +
Sbjct: 98  VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAI 155

Query: 501 QTFNGQMM 524
           +  NG ++
Sbjct: 156 EKMNGMLL 163



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 20/67 (29%), Positives = 36/67 (53%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E   ++I +    MD+  +   F   G   SVK++ D ++G+ +G+GFV F  H  A++ 
Sbjct: 189 EFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKA 247

Query: 498 LQTFNGQ 518
           +   NG+
Sbjct: 248 VDEMNGK 254



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/65 (26%), Positives = 36/65 (55%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   +D+  +   F+  G   S K++ +   G+ +G+GFV F+S   A + +   
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEM 353

Query: 510 NGQMM 524
           NG+++
Sbjct: 354 NGRIV 358

---

>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++GDL   + E  +Y  F+  G   S+++ RD  T +  GY +V F   A AER L T
Sbjct: 12  SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query: 507 FN 512
            N
Sbjct: 72  MN 73



 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 22/68 (32%), Positives = 37/68 (54%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   +Y  F+  G   S K++ D+   +  GYGFV F +  AAER +
Sbjct: 98  VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAI 155

Query: 501 QTFNGQMM 524
           +  NG ++
Sbjct: 156 EKMNGMLL 163



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 20/67 (29%), Positives = 36/67 (53%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E   ++I +    MD+  +   F   G   SVK++ D ++G+ +G+GFV F  H  A++ 
Sbjct: 189 EFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKA 247

Query: 498 LQTFNGQ 518
           +   NG+
Sbjct: 248 VDEMNGK 254



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/65 (26%), Positives = 36/65 (55%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   +D+  +   F+  G   S K++ +   G+ +G+GFV F+S   A + +   
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEM 353

Query: 510 NGQMM 524
           NG+++
Sbjct: 354 NGRIV 358

---

>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++GDL   + E  +Y  F+  G   S+++ RD  T +  GY +V F   A AER L T
Sbjct: 12  SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query: 507 FN 512
            N
Sbjct: 72  MN 73



 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 22/68 (32%), Positives = 37/68 (54%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   +Y  F+  G   S K++ D+   +  GYGFV F +  AAER +
Sbjct: 98  VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAI 155

Query: 501 QTFNGQMM 524
           +  NG ++
Sbjct: 156 EKMNGMLL 163



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 20/67 (29%), Positives = 36/67 (53%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E   ++I +    MD+  +   F   G   SVK++ D ++G+ +G+GFV F  H  A++ 
Sbjct: 189 EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKA 247

Query: 498 LQTFNGQ 518
           +   NG+
Sbjct: 248 VDEMNGK 254



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/65 (26%), Positives = 36/65 (55%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   +D+  +   F+  G   S K++ +   G+ +G+GFV F+S   A + +   
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEM 353

Query: 510 NGQMM 524
           NG+++
Sbjct: 354 NGRIV 358

---

>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++GDL   + E  +Y  F+  G   S+++ RD  T +  GY +V F   A AER L T
Sbjct: 12  SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query: 507 FN 512
            N
Sbjct: 72  MN 73



 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 22/68 (32%), Positives = 37/68 (54%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   +Y  F+  G   S K++ D+   +  GYGFV F +  AAER +
Sbjct: 98  VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAI 155

Query: 501 QTFNGQMM 524
           +  NG ++
Sbjct: 156 EKMNGMLL 163



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 20/67 (29%), Positives = 36/67 (53%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E   ++I +    MD+  +   F   G   SVK++ D ++G+ +G+GFV F  H  A++ 
Sbjct: 189 EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKA 247

Query: 498 LQTFNGQ 518
           +   NG+
Sbjct: 248 VDEMNGK 254



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/65 (26%), Positives = 36/65 (55%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   +D+  +   F+  G   S K++ +   G+ +G+GFV F+S   A + +   
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEM 353

Query: 510 NGQMM 524
           NG+++
Sbjct: 354 NGRIV 358

---

>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)|
          Length = 291

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/62 (33%), Positives = 35/62 (56%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++G+L + +D   +   F   G  + V++I DK TG+ +G+GFV  ++    E   Q F
Sbjct: 89  LFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQF 148

Query: 510 NG 515
           NG
Sbjct: 149 NG 150



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 16/67 (23%), Positives = 36/67 (53%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    +++G+L + +D+  +   F+  G     K++ D+ +G+ +G+GFV ++S      
Sbjct: 204 DSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVND 263

Query: 495 VLQTFNG 515
            + + NG
Sbjct: 264 AIDSLNG 270

---

>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein|
           4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein 1) (APP-1)
          Length = 644

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++GDL   + E  +Y  F+  G   S+++ RD  T +  GY +V F   A AER L T
Sbjct: 12  SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query: 507 FN 512
            N
Sbjct: 72  MN 73



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 19/67 (28%), Positives = 37/67 (55%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E   ++I +    +D+  +   F+  G+  SVK++RD   G+ +G+GFV +  H  A + 
Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDANKA 247

Query: 498 LQTFNGQ 518
           ++  NG+
Sbjct: 248 VEEMNGK 254



 Score = 38.1 bits (87), Expect = 0.017
 Identities = 19/68 (27%), Positives = 36/68 (52%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   +Y  F+  G   S K++ D+   +  GY FV F +  AA++ +
Sbjct: 98  VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYAFVHFETQEAADKAI 155

Query: 501 QTFNGQMM 524
           +  NG ++
Sbjct: 156 EKMNGMLL 163



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 18/65 (27%), Positives = 36/65 (55%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L+I +L   +D+  +   F+  G   S K++ +   G+ +G+GFV F+S   A + +   
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEM 353

Query: 510 NGQMM 524
           NG+++
Sbjct: 354 NGRIV 358

---

>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /|
           hnRNP B1)
          Length = 341

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 19/69 (27%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V+ L++G ++   +E+++   F   G+  ++++I D+Q+G+ +G+GFV F  H   ++++
Sbjct: 99  VKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 158

Query: 501 ----QTFNG 515
                T NG
Sbjct: 159 LQKYHTING 167



 Score = 34.3 bits (77), Expect = 0.24
 Identities = 16/62 (25%), Positives = 33/62 (53%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           ++ R L+IG L +   E  + + +   G+     ++RD  + + +G+GFV F+S A  + 
Sbjct: 6   EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 65

Query: 495 VL 500
            +
Sbjct: 66  AM 67

---

>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein|
           1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B)
           (PABP 1-B) (xPABP1-B)
          Length = 633

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++GDL   + E  +Y  F+  G   S+++ RD  T +  GY +V F   A AER L T
Sbjct: 12  SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query: 507 FN 512
            N
Sbjct: 72  MN 73



 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 22/68 (32%), Positives = 36/68 (52%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   +Y  F+  G   S K++ D+   +  GYGFV F +  AAER +
Sbjct: 98  VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAI 155

Query: 501 QTFNGQMM 524
              NG ++
Sbjct: 156 DKMNGMLL 163



 Score = 36.6 bits (83), Expect = 0.049
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E   ++I +    MD+  +   F   G   SVK++ D   G+ +G+GFV F  H  A++ 
Sbjct: 189 EFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKA 247

Query: 498 LQTFNGQ 518
           +   NG+
Sbjct: 248 VDDMNGK 254



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   +D+  +   F   G   S K++ +   G+ +G+GFV F+S   A + +   
Sbjct: 296 LYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEM 353

Query: 510 NGQMM 524
           NG+++
Sbjct: 354 NGRIV 358

---

>SGN1_YEAST (P40561) RNA-binding protein SGN1|
          Length = 250

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 20/66 (30%), Positives = 39/66 (59%)
 Frame = +3

Query: 324 RTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           R++++G++   +    I   F + G+ + + L+ D+ TG  +GYG++EF S A  E+ LQ
Sbjct: 64  RSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQ 123

Query: 504 TFNGQM 521
              G++
Sbjct: 124 LNGGEL 129

---

>SAP49_SCHPO (O14102) Spliceosome-associated protein 49|
          Length = 335

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 19/67 (28%), Positives = 35/67 (52%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++G+L   +DE  +Y  F+  G+      +   + G+ +GYGFV + S   A+  ++  
Sbjct: 101 LFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAM 160

Query: 510 NGQMMPN 530
           N Q + N
Sbjct: 161 NNQFLMN 167



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/62 (22%), Positives = 28/62 (45%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           T+++G+L   + ++ ++      G   ++ + RD+      G+GF EF      E   Q 
Sbjct: 12  TIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQI 71

Query: 507 FN 512
            N
Sbjct: 72  LN 73

---

>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)|
           (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15
           (p15-TIA-1)]
          Length = 386

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++GDL   +    I + FA  G     ++++D  TG+ +GYGFV F +   AE  +Q  
Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167

Query: 510 NGQMM 524
            GQ +
Sbjct: 168 GGQWL 172



 Score = 37.0 bits (84), Expect = 0.038
 Identities = 23/72 (31%), Positives = 35/72 (48%)
 Frame = +3

Query: 324 RTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           +TL++G+L   + E  I   F+  G  ++ K+I D  T     Y FVEF  H  A   L 
Sbjct: 7   KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64

Query: 504 TFNGQMMPNVEL 539
             NG+ +   E+
Sbjct: 65  AMNGRKIMGKEV 76

---

>DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4|
          Length = 579

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/58 (36%), Positives = 35/58 (60%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           T+++G +   MDE  I SCF   G  + VK+I ++ TG  +GYGFV F +    ++++
Sbjct: 206 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 262



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/58 (36%), Positives = 35/58 (60%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           T+++G +   MDE  I SCF   G  + VK+I ++ TG  +GYGFV F +    ++++
Sbjct: 41  TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 97

---

>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 428

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/71 (29%), Positives = 43/71 (60%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S + R++++G+L Y +DE+ +   F + G   +V+++R+  TG  +G+G+V F +  A  
Sbjct: 281 SRDKRSVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVH 340

Query: 492 RVLQTFNGQMM 524
             L+  N ++M
Sbjct: 341 LALKLNNSELM 351

---

>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)|
          Length = 386

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++GDL   +    I + FA  G     ++++D  TG+ +GYGFV F +   AE  +Q  
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167

Query: 510 NGQMM 524
            GQ +
Sbjct: 168 GGQWL 172



 Score = 37.0 bits (84), Expect = 0.038
 Identities = 23/72 (31%), Positives = 35/72 (48%)
 Frame = +3

Query: 324 RTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           +TL++G+L   + E  I   F+  G  ++ K+I D  T     Y FVEF  H  A   L 
Sbjct: 7   KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64

Query: 504 TFNGQMMPNVEL 539
             NG+ +   E+
Sbjct: 65  AMNGRKIMGKEV 76



 Score = 34.3 bits (77), Expect = 0.24
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           T++ G +   + E  +   F+  G+   +++  DK      GY FV F+SH +A   + +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDK------GYSFVRFSSHESAAHAIVS 268

Query: 507 FNG 515
            NG
Sbjct: 269 VNG 271

---

>DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2|
          Length = 558

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/58 (36%), Positives = 35/58 (60%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           T+++G +   MDE  I SCF   G  + VK+I ++ TG  +GYGFV F +    ++++
Sbjct: 41  TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 97

---

>RB97D_DROME (Q02926) Ribonucleoprotein RB97D|
          Length = 471

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V+ L++G L+   DE  +   F   G   SVKL+ DK TG+ +G+ FVEF  + A ++ +
Sbjct: 122 VKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           + +R L+IG L  +  E  +   +   G+   V ++RD  T + +G+GF+ +      +R
Sbjct: 29  EHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDR 88

---

>DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3|
          Length = 486

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/58 (36%), Positives = 35/58 (60%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           T+++G +   MDE  I SCF   G  + VK+I ++ TG  +GYGFV F +    ++++
Sbjct: 41  TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 97

---

>DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1|
          Length = 744

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/58 (36%), Positives = 35/58 (60%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           T+++G +   MDE  I SCF   G  + VK+I ++ TG  +GYGFV F +    ++++
Sbjct: 371 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 427



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/58 (36%), Positives = 35/58 (60%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           T+++G +   MDE  I SCF   G  + VK+I ++ TG  +GYGFV F +    ++++
Sbjct: 206 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 262



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/58 (36%), Positives = 35/58 (60%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           T+++G +   MDE  I SCF   G  + VK+I ++ TG  +GYGFV F +    ++++
Sbjct: 41  TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 97

---

>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)|
          Length = 348

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 19/61 (31%), Positives = 35/61 (57%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPNVE 536
           M +  +Y+ F   G   + +++RD +TG   GY FV+FA+   ++R +++ NG  + N  
Sbjct: 121 MTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSLNGITVRNKR 180

Query: 537 L 539
           L
Sbjct: 181 L 181



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   + ++ + + F   G      ++RDK TG+ +G  FV F     A+  +   
Sbjct: 198 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 257

Query: 510 N 512
           N
Sbjct: 258 N 258

---

>SXL_MUSDO (O17310) Sex-lethal homolog|
          Length = 324

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 20/61 (32%), Positives = 34/61 (55%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPNVE 536
           M +  +Y+ F   G   + ++++D +TG   GY FV+FAS   A+  ++T NG  + N  
Sbjct: 113 MTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKR 172

Query: 537 L 539
           L
Sbjct: 173 L 173



 Score = 32.3 bits (72), Expect = 0.93
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   + ++ +   F   G      ++RDK TG+ +G  FV F     A+  +   
Sbjct: 190 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISAL 249

Query: 510 N 512
           N
Sbjct: 250 N 250

---

>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)|
          Length = 305

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 20/59 (33%), Positives = 38/59 (64%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           +V+ L++G L+  + E  +   F+  G  +  ++I DKQ+G+ +G+GFV F +H AA++
Sbjct: 96  KVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADK 154

---

>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor|
          Length = 315

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 17/65 (26%), Positives = 39/65 (60%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++G++ + +D+  +   F+  G+  S +++ D++TG+ +G+GFV  AS A     +   
Sbjct: 232 IYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANL 291

Query: 510 NGQMM 524
           +GQ +
Sbjct: 292 DGQSL 296

---

>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
           (Nucleolar phosphoprotein NOPP34-like protein)
          Length = 269

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 23/65 (35%), Positives = 36/65 (55%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++G L   + E  + S F   G+   +++ R K+TG  +GYGFVEF     A+ V +T 
Sbjct: 47  LYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETM 106

Query: 510 NGQMM 524
           N  +M
Sbjct: 107 NNYLM 111

---

>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor|
          Length = 212

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L+IG L    DE+ +   F++       +++ +K TG+ +GYGFV F S  +A   +   
Sbjct: 33  LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAM 92

Query: 510 NGQ 518
           NGQ
Sbjct: 93  NGQ 95

---

>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 375

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++GDL   +    I S FA  G+    ++++D  TG+ +GYGFV F +   AE  +   
Sbjct: 99  VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158

Query: 510 NGQMM 524
            GQ +
Sbjct: 159 GGQWL 163



 Score = 36.6 bits (83), Expect = 0.049
 Identities = 23/72 (31%), Positives = 35/72 (48%)
 Frame = +3

Query: 324 RTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           RTL++G+L   + E  I   F+  G  +S K+I +  +     Y FVEF  H  A   L 
Sbjct: 9   RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSND--PYCFVEFYEHRDAAAALA 66

Query: 504 TFNGQMMPNVEL 539
             NG+ +   E+
Sbjct: 67  AMNGRKILGKEV 78

---

>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3)
          Length = 153

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 19/71 (26%), Positives = 39/71 (54%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S E   L++G L +  DE  +   F++ G    V +++D++T + +G+GF+ F +   A 
Sbjct: 2   SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61

Query: 492 RVLQTFNGQMM 524
             ++  NG+ +
Sbjct: 62  DAMRAMNGESL 72

---

>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15|
          Length = 296

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 19/67 (28%), Positives = 36/67 (53%)
 Frame = +3

Query: 324 RTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           R +++G + Y   E  I    +N G   ++K++ D QTG+ +GY F+EF    ++   ++
Sbjct: 18  RVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 77

Query: 504 TFNGQMM 524
             NG  +
Sbjct: 78  NLNGYQL 84

---

>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 296

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           T+++G +   MDE  I   FA  G  + VK+I D+ TG  +GYGFV F +    ++++++
Sbjct: 41  TVFVGGIDVRMDETEIRGFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES 99

Query: 507 ---FNGQMM 524
              F+G+ +
Sbjct: 100 QINFHGKKL 108

---

>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 392

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++GDL   +    I S FA  G+    ++++D  TG+ +GYGFV F +   AE  +   
Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query: 510 NGQMM 524
            GQ +
Sbjct: 176 GGQWL 180



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 15/87 (17%)
 Frame = +3

Query: 324 RTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDK---------------QTGQLQGYG 458
           RTL++G+L   + E  I   F+  G  +S K+I ++               Q      Y 
Sbjct: 9   RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68

Query: 459 FVEFASHAAAERVLQTFNGQMMPNVEL 539
           FVEF  H  A   L   NG+ +   E+
Sbjct: 69  FVEFYEHRDAAAALAAMNGRKILGKEV 95

---

>SXL_CHRRU (O97018) Sex-lethal homolog|
          Length = 307

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 19/61 (31%), Positives = 34/61 (55%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPNVE 536
           M +  +Y+ F   G   + ++++D +TG   GY FV+FAS   A+  +++ NG  + N  
Sbjct: 96  MTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKR 155

Query: 537 L 539
           L
Sbjct: 156 L 156



 Score = 32.3 bits (72), Expect = 0.93
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   + ++ +   F   G      ++RDK TG+ +G  FV F     A+  +   
Sbjct: 173 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 232

Query: 510 N 512
           N
Sbjct: 233 N 233

---

>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PABP 2)
          Length = 629

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 19/62 (30%), Positives = 35/62 (56%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++GDL + + ++ ++  F   G   +V++ RD  T +  GYG+V F +   A R +Q 
Sbjct: 37  SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 96

Query: 507 FN 512
            N
Sbjct: 97  LN 98



 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 19/65 (29%), Positives = 40/65 (61%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++I +L   +D   ++  F++ G   S K+  D  +GQ +GYGFV++A+  +A++ ++  
Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEKL 184

Query: 510 NGQMM 524
           NG ++
Sbjct: 185 NGMLL 189



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/69 (23%), Positives = 37/69 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++ +L     ++ + + F   G+  S  +++D + G+ +G+GFV F +   A R +++ 
Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESL 275

Query: 510 NGQMMPNVE 536
           NG    + E
Sbjct: 276 NGHKFDDKE 284



 Score = 30.8 bits (68), Expect = 2.7
 Identities = 19/70 (27%), Positives = 35/70 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   + +  +   F+  G   S K++RD   G  +G GFV FA+   A   +   
Sbjct: 320 LYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPN-GTSKGSGFVAFATPEEATEAMSQL 378

Query: 510 NGQMMPNVEL 539
           +G+M+ +  L
Sbjct: 379 SGKMIESKPL 388

---

>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2|
          Length = 326

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 19/62 (30%), Positives = 35/62 (56%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++G L Y + E  I   F+  GE  ++ L+RDK+TG+ +G+ F+ +    +    +  F
Sbjct: 38  IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97

Query: 510 NG 515
           NG
Sbjct: 98  NG 99

---

>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3) (RNPL)
          Length = 157

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 19/71 (26%), Positives = 39/71 (54%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S E   L++G L +  DE  +   F++ G    V +++D++T + +G+GF+ F +   A 
Sbjct: 2   SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61

Query: 492 RVLQTFNGQMM 524
             ++  NG+ +
Sbjct: 62  VAMRAMNGESL 72

---

>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2|
          Length = 168

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 19/62 (30%), Positives = 36/62 (58%)
 Frame = +3

Query: 333 WIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFN 512
           ++G L +  +   +   FAN G+    K+I D++TG+ +G+GFV F+S  +    ++  N
Sbjct: 11  FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMN 70

Query: 513 GQ 518
           G+
Sbjct: 71  GK 72

---

>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)|
          Length = 292

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 20/62 (32%), Positives = 35/62 (56%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++G+L + +D   +   F   G  + V++I DK +G+ +G+GFV  ++    E   Q F
Sbjct: 90  LFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQF 149

Query: 510 NG 515
           NG
Sbjct: 150 NG 151



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 16/67 (23%), Positives = 36/67 (53%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    +++G+L + +D+  +   F+  G     K++ D+ +G+ +G+GFV ++S      
Sbjct: 205 DSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVND 264

Query: 495 VLQTFNG 515
            + + NG
Sbjct: 265 AIDSLNG 271

---

>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1|
           protein) (Protein P11)
          Length = 385

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 18/60 (30%), Positives = 36/60 (60%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V+ L++G L+   DE  +   F + G+  SV ++ DK TG+ +G+ F+EF  +   ++++
Sbjct: 114 VKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKII 173

---

>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein|
          Length = 157

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 19/62 (30%), Positives = 36/62 (58%)
 Frame = +3

Query: 333 WIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFN 512
           ++G L +      + + FA+ GE    K+I D++TG+ +G+GFV F+S  +    ++  N
Sbjct: 11  FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70

Query: 513 GQ 518
           G+
Sbjct: 71  GK 72

---

>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2|
          Length = 322

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 19/62 (30%), Positives = 35/62 (56%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++G L Y + E  I   F+  GE  ++ L+RDK+TG+ +G+ F+ +    +    +  F
Sbjct: 38  IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97

Query: 510 NG 515
           NG
Sbjct: 98  NG 99

---

>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)|
          Length = 233

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 16/65 (24%), Positives = 39/65 (60%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++G+L + +D + +   F+  G+  S +++ D++TG+ +G+GFV  +S +     +   
Sbjct: 151 VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 210

Query: 510 NGQMM 524
           +GQ +
Sbjct: 211 DGQTL 215



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 20/74 (27%), Positives = 40/74 (54%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E   L++G+L Y +D   +   F   G  +  ++I +++T + +G+GFV  ++   AE+ 
Sbjct: 53  EEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 112

Query: 498 LQTFNGQMMPNVEL 539
           ++  NG  M   +L
Sbjct: 113 VELLNGYDMDGRQL 126

---

>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core|
           protein A1-A) (PEN repeat clone P9)
          Length = 365

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V+ L++G L+   DE  I   F + G    + ++ DK+TG+ +G+ FVEF  +   ++V+
Sbjct: 121 VKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVV 180

Query: 501 ----QTFNGQMM 524
                  NG+M+
Sbjct: 181 LQKQHQLNGKMV 192

---

>SXL_DROSU (Q24668) Protein sex-lethal|
          Length = 354

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 19/61 (31%), Positives = 33/61 (54%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPNVE 536
           M +  +Y+ F   G   + +++RD +TG   GY FV+F S   ++R ++  NG  + N  
Sbjct: 138 MTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKR 197

Query: 537 L 539
           L
Sbjct: 198 L 198



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   + ++ + + F   G      ++RDK TG+ +G  FV +     A+  +   
Sbjct: 215 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 274

Query: 510 N 512
           N
Sbjct: 275 N 275

---

>SXL_DROME (P19339) Protein sex-lethal|
          Length = 354

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 19/61 (31%), Positives = 33/61 (54%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPNVE 536
           M +  +Y+ F   G   + +++RD +TG   GY FV+F S   ++R ++  NG  + N  
Sbjct: 136 MTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKR 195

Query: 537 L 539
           L
Sbjct: 196 L 196



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   + ++ + + F   G      ++RDK TG+ +G  FV +     A+  +   
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272

Query: 510 N 512
           N
Sbjct: 273 N 273

---

>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein|
          Length = 157

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 17/62 (27%), Positives = 34/62 (54%)
 Frame = +3

Query: 333 WIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFN 512
           ++G L +  ++  +   F+  G+    K+I D++TG+ +G+GFV F    +    ++  N
Sbjct: 9   FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMN 68

Query: 513 GQ 518
           GQ
Sbjct: 69  GQ 70

---

>RBM8A_MOUSE (Q9CWZ3) RNA-binding protein 8A (RNA-binding motif protein 8A)|
           (Ribonucleoprotein RBM8A)
          Length = 174

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 19/52 (36%), Positives = 32/52 (61%)
 Frame = +3

Query: 363 ENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQ 518
           E  I+  FA  GE +++ L  D++TG L+GY  VE+ ++  A+  ++  NGQ
Sbjct: 86  EEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQ 137

---

>RBM8A_HUMAN (Q9Y5S9) RNA-binding protein 8A (RNA-binding motif protein 8A)|
           (Ribonucleoprotein RBM8A) (RNA-binding protein Y14)
           (Binder of OVCA1-1) (BOV-1)
          Length = 174

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 19/52 (36%), Positives = 32/52 (61%)
 Frame = +3

Query: 363 ENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQ 518
           E  I+  FA  GE +++ L  D++TG L+GY  VE+ ++  A+  ++  NGQ
Sbjct: 86  EEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQ 137

---

>FCA_ARATH (O04425) Flowering time control protein FCA|
          Length = 747

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 22/64 (34%), Positives = 35/64 (54%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++G +     E  I   F   G    V LI+DK+TGQ QG  FV++A+   A+R ++  
Sbjct: 122 LFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRAL 181

Query: 510 NGQM 521
           + Q+
Sbjct: 182 HNQI 185



 Score = 33.1 bits (74), Expect = 0.54
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++G L     E  +   F   G  + V L+RD+   Q +G GFV+++S   A   +   
Sbjct: 213 LFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYR-QSRGCGFVKYSSKETAMAAIDGL 271

Query: 510 NG 515
           NG
Sbjct: 272 NG 273

---

>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (xCIRP)
          Length = 163

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 21/69 (30%), Positives = 39/69 (56%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           SDE + L+IG L +  +E+ +   F   G    V +++D++T + +G+GFV F +   A+
Sbjct: 2   SDEGK-LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAK 60

Query: 492 RVLQTFNGQ 518
             +   NG+
Sbjct: 61  DAMMAMNGK 69

---

>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)|
          Length = 276

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 15/65 (23%), Positives = 39/65 (60%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++G++ + +D+  +   F+  G+  S +++ D+++G+ +G+GFV  +S A     +   
Sbjct: 193 IYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANL 252

Query: 510 NGQMM 524
           +GQ +
Sbjct: 253 DGQTL 257

---

>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++GDL   + E+ +Y  F   G  +  ++ RD  T    GYG+V F   A AE  L T 
Sbjct: 20  LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79

Query: 510 N 512
           N
Sbjct: 80  N 80



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 18/54 (33%), Positives = 34/54 (62%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQ 518
           +D+  +   F   G  +SVK+IRD  +G+ +G+GFV + +H AA++ +   +G+
Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGK 262



 Score = 33.9 bits (76), Expect = 0.32
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   ++  F+  G   S K++ D    +  GY +V F S AAA R +
Sbjct: 105 VGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSK--GYAYVHFDSLAAANRAI 162

Query: 501 QTFNGQMMPN 530
              NG  + N
Sbjct: 163 WHMNGVRLNN 172

---

>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++GDL   + E+ +Y  F   G  +  ++ RD  T    GYG+V F   A AE  L T 
Sbjct: 20  LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79

Query: 510 N 512
           N
Sbjct: 80  N 80



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 18/54 (33%), Positives = 34/54 (62%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQ 518
           +D+  +   F   G  +SVK+IRD  +G+ +G+GFV + +H AA++ +   +G+
Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGK 262



 Score = 33.9 bits (76), Expect = 0.32
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   ++  F+  G   S K++ D    +  GY +V F S AAA R +
Sbjct: 105 VGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSK--GYAYVHFDSLAAANRAI 162

Query: 501 QTFNGQMMPN 530
              NG  + N
Sbjct: 163 WHMNGVRLNN 172

---

>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++GDL   + E+ +Y  F   G  +  ++ RD  T    GYG+V F   A AE  L T 
Sbjct: 20  LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79

Query: 510 N 512
           N
Sbjct: 80  N 80



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 18/54 (33%), Positives = 34/54 (62%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQ 518
           +D+  +   F   G  +SVK+IRD  +G+ +G+GFV + +H AA++ +   +G+
Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGK 262



 Score = 33.9 bits (76), Expect = 0.32
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   ++  F+  G   S K++ D    +  GY +V F S AAA R +
Sbjct: 105 VGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSK--GYAYVHFDSLAAANRAI 162

Query: 501 QTFNGQMMPN 530
              NG  + N
Sbjct: 163 WHMNGVRLNN 172

---

>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++GDL   + E+ +Y  F   G  +  ++ RD  T    GYG+V F   A AE  L T 
Sbjct: 20  LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79

Query: 510 N 512
           N
Sbjct: 80  N 80



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 18/54 (33%), Positives = 34/54 (62%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQ 518
           +D+  +   F   G  +SVK+IRD  +G+ +G+GFV + +H AA++ +   +G+
Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGK 262



 Score = 33.9 bits (76), Expect = 0.32
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   ++  F+  G   S K++ D    +  GY +V F S AAA R +
Sbjct: 105 VGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSK--GYAYVHFDSLAAANRAI 162

Query: 501 QTFNGQMMPN 530
              NG  + N
Sbjct: 163 WHMNGVRLNN 172

---

>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++GDL   + E+ +Y  F   G  +  ++ RD  T    GYG+V F   A AE  L T 
Sbjct: 20  LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79

Query: 510 N 512
           N
Sbjct: 80  N 80



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 18/54 (33%), Positives = 34/54 (62%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQ 518
           +D+  +   F   G  +SVK+IRD  +G+ +G+GFV + +H AA++ +   +G+
Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGK 262



 Score = 33.9 bits (76), Expect = 0.32
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   ++  F+  G   S K++ D    +  GY +V F S AAA R +
Sbjct: 105 VGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSK--GYAYVHFDSLAAANRAI 162

Query: 501 QTFNGQMMPN 530
              NG  + N
Sbjct: 163 WHMNGVRLNN 172

---

>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++GDL   + E+ +Y  F   G  +  ++ RD  T    GYG+V F   A AE  L T 
Sbjct: 20  LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79

Query: 510 N 512
           N
Sbjct: 80  N 80



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 18/54 (33%), Positives = 34/54 (62%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQ 518
           +D+  +   F   G  +SVK+IRD  +G+ +G+GFV + +H AA++ +   +G+
Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGK 262



 Score = 33.9 bits (76), Expect = 0.32
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  ++I +L   +D   ++  F+  G   S K++ D    +  GY +V F S AAA R +
Sbjct: 105 VGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSK--GYAYVHFDSLAAANRAI 162

Query: 501 QTFNGQMMPN 530
              NG  + N
Sbjct: 163 WHMNGVRLNN 172

---

>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 20/69 (28%), Positives = 40/69 (57%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           SDE + L++G L +  +E  +   F+  G+   V +++D++T + +G+GFV F +   A+
Sbjct: 3   SDEGK-LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query: 492 RVLQTFNGQ 518
             +   NG+
Sbjct: 62  DAMMAMNGK 70

---

>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP)
          Length = 172

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 20/69 (28%), Positives = 40/69 (57%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           SDE + L++G L +  +E  +   F+  G+   V +++D++T + +G+GFV F +   A+
Sbjct: 3   SDEGK-LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query: 492 RVLQTFNGQ 518
             +   NG+
Sbjct: 62  DAMMAMNGK 70

---

>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 20/69 (28%), Positives = 40/69 (57%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           SDE + L++G L +  +E  +   F+  G+   V +++D++T + +G+GFV F +   A+
Sbjct: 3   SDEGK-LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query: 492 RVLQTFNGQ 518
             +   NG+
Sbjct: 62  DAMMAMNGK 70

---

>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 20/69 (28%), Positives = 40/69 (57%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           SDE + L++G L +  +E  +   F+  G+   V +++D++T + +G+GFV F +   A+
Sbjct: 3   SDEGK-LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query: 492 RVLQTFNGQ 518
             +   NG+
Sbjct: 62  DAMMAMNGK 70

---

>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 20/69 (28%), Positives = 40/69 (57%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           SDE + L++G L +  +E  +   F+  G+   V +++D++T + +G+GFV F +   A+
Sbjct: 3   SDEGK-LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query: 492 RVLQTFNGQ 518
             +   NG+
Sbjct: 62  DAMMAMNGK 70

---

>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4|
           (RNA-binding protein srp-2) (CeSC35)
          Length = 196

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 24/75 (32%), Positives = 36/75 (48%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L I +L Y    N +   F   G+   V + RDK + Q +G+GFV F     AE  L  
Sbjct: 20  SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79

Query: 507 FNGQMMPNVELAYRL 551
            +G+++   EL   L
Sbjct: 80  TDGKLVDGRELRVTL 94

---

>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 406

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 18/53 (33%), Positives = 32/53 (60%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEF 470
           +DE+  L++G L +   +  + S F+  GE     +++DK T Q +G+GFV+F
Sbjct: 6   ADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58

---

>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3)
          Length = 660

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 20/65 (30%), Positives = 36/65 (55%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++I +L   +D   ++  F++ G   S K+  D  TG+ +GYGFV+F    +A+  +   
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKL 196

Query: 510 NGQMM 524
           NG +M
Sbjct: 197 NGMLM 201



 Score = 34.7 bits (78), Expect = 0.19
 Identities = 19/65 (29%), Positives = 36/65 (55%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   +D+  +   F+  G   S K++ + Q G  +G+GFV +++   A R L   
Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEM 392

Query: 510 NGQMM 524
           NG+M+
Sbjct: 393 NGKMI 397



 Score = 34.3 bits (77), Expect = 0.24
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L+ GDL   + E +++  F +     SV++ RD+    L GY ++ F++   A R ++ 
Sbjct: 50  SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSL-GYAYINFSNPNDAYRAMEA 108

Query: 507 FN 512
            N
Sbjct: 109 LN 110



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++ +L   + E+ +   F   G   S  ++RD Q+G  + +GFV F    AA   ++  
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKM 289

Query: 510 NG 515
           NG
Sbjct: 290 NG 291

---

>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)|
          Length = 289

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 20/60 (33%), Positives = 36/60 (60%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           T+++G +   M+E  I S F   G  + VK+I D+ TG  +GYGFV F  +   ++++++
Sbjct: 37  TVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNVDVQKIVES 95

---

>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog|
          Length = 342

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 19/67 (28%), Positives = 38/67 (56%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V+ L++G ++  M+EN +   F   G   S  ++ DK+T + +G+ FVEF  +   +++ 
Sbjct: 107 VKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKIC 166

Query: 501 QTFNGQM 521
            + N Q+
Sbjct: 167 LSRNHQI 173

---

>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 407

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 18/53 (33%), Positives = 32/53 (60%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEF 470
           +DE+  L++G L +   +  + S F+  GE     +++DK T Q +G+GFV+F
Sbjct: 6   ADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58

---

>NOP12_CANGA (Q6FUS6) Nucleolar protein 12|
          Length = 396

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 16/62 (25%), Positives = 36/62 (58%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D+ R++++G+L +  DE  ++  F   G  + V+++RD +T   +G+ +V+F    +  +
Sbjct: 225 DKQRSVFVGNLDFEEDEESLWKHFGACGSIEYVRIVRDPKTNMGKGFAYVQFNELQSVSK 284

Query: 495 VL 500
            L
Sbjct: 285 AL 286

---

>BOLL_MOUSE (Q924M5) Protein boule-like|
          Length = 281

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 17/58 (29%), Positives = 35/58 (60%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           +++G + +  +EN +   F+  G  + VK++ D+  G  +GYGF+ F +   A+++LQ
Sbjct: 35  IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQKILQ 91

---

>U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit)
          Length = 475

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 17/75 (22%), Positives = 37/75 (49%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    L+IG L  +++++ +     + G  ++  L++D  TG  +GY F E+      ++
Sbjct: 256 DSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQ 315

Query: 495 VLQTFNGQMMPNVEL 539
            +   NG  + + +L
Sbjct: 316 AIAGLNGMQLGDKKL 330

---

>U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (hU2AF(65))
          Length = 475

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 17/75 (22%), Positives = 37/75 (49%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    L+IG L  +++++ +     + G  ++  L++D  TG  +GY F E+      ++
Sbjct: 256 DSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQ 315

Query: 495 VLQTFNGQMMPNVEL 539
            +   NG  + + +L
Sbjct: 316 AIAGLNGMQLGDKKL 330

---

>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660|
           (Poly(A)-binding protein At2g36660) (PABP)
          Length = 609

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++GDL   + E  +Y  FA      SV+L +D  +G+   YG+  F S   A   ++ 
Sbjct: 25  SLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEK 84

Query: 507 FNGQMM 524
            N  ++
Sbjct: 85  KNNSLL 90



 Score = 37.0 bits (84), Expect = 0.038
 Identities = 20/68 (29%), Positives = 40/68 (58%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           +V  +++ ++   + E  +   F+  G   S KL+ D++ G+ +G+GFV F++   A   
Sbjct: 302 KVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEK-GKSKGFGFVCFSTPEEAIDA 360

Query: 498 LQTFNGQM 521
           ++TF+GQM
Sbjct: 361 VKTFHGQM 368



 Score = 33.5 bits (75), Expect = 0.42
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  +++ +L   +    +   F   G   S K +   + G+ +GYGFV+F    AA   +
Sbjct: 111 VGNVFVKNLPESVTNAVLQDMFKKFGNIVSCK-VATLEDGKSRGYGFVQFEQEDAAHAAI 169

Query: 501 QTFNGQMMPNVEL 539
           QT N  ++ + E+
Sbjct: 170 QTLNSTIVADKEI 182

---

>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1) (Proline-rich Vg1
           mRNA-binding protein)
          Length = 360

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEF 470
           DE+  L++G L +   +  + S F+  GE     +++DK T Q +G+GFV+F
Sbjct: 7   DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58

---

>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)|
          Length = 142

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = +3

Query: 366 NYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQ 518
           N ++S F+  GE    K+I D++T + +G+GFV F++  A    ++  NG+
Sbjct: 1   NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGK 51

---

>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription|
           termination factor ctf1)
          Length = 363

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVE-FASHAAAERVLQT 506
           +++G++ Y + E  +   F   G  ++ KL+ D +TG  +GYGF E F S   A  V + 
Sbjct: 9   VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKL 68

Query: 507 FNGQMMP 527
            N ++ P
Sbjct: 69  NNSELGP 75

---

>NOP12_ASHGO (Q75BJ7) Nucleolar protein 12|
          Length = 426

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 16/62 (25%), Positives = 36/62 (58%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D  R++++G+L +   E  ++  F + G  + V+++RD +T   +G+ +V+FA   +  +
Sbjct: 256 DRKRSVFVGNLDFEESEESLWKHFMSCGPIEYVRIVRDPKTNVGKGFAYVQFADLVSVNK 315

Query: 495 VL 500
            L
Sbjct: 316 AL 317

---

>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic|
           region
          Length = 220

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 18/65 (27%), Positives = 35/65 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++  L +   E  +   FA  G+ + V+L R+K+TG  + YGF+EF +   A    ++ 
Sbjct: 93  IYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESM 152

Query: 510 NGQMM 524
           N  ++
Sbjct: 153 NNYLL 157

---

>NOP12_YARLI (Q6C2Q7) Nucleolar protein 12|
          Length = 509

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 16/62 (25%), Positives = 36/62 (58%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D  R +++G L +   E  ++  F++ G+ + V+++RD +T   +G+ +V+F    + E+
Sbjct: 271 DHKRCVFVGALDFEEQEESLWEAFSSCGDVEYVRIVRDPKTNVGKGFAYVQFKDVNSVEQ 330

Query: 495 VL 500
            L
Sbjct: 331 AL 332

---

>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3) (Testis-specific poly(A)-binding protein)
          Length = 631

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 19/68 (27%), Positives = 36/68 (52%)
 Frame = +3

Query: 321 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           V  +++ +L   ++   +Y   +  G   S  ++ D+   +  GYGFV F +H AAER +
Sbjct: 98  VGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAERAI 155

Query: 501 QTFNGQMM 524
           +  NG ++
Sbjct: 156 KKMNGMLL 163



 Score = 38.1 bits (87), Expect = 0.017
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +3

Query: 357 MDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQ 518
           MD+  +   F   G   SVK++ D ++G+ +G+GFV F  H  A++ +   NG+
Sbjct: 202 MDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGK 254



 Score = 33.1 bits (74), Expect = 0.54
 Identities = 18/69 (26%), Positives = 38/69 (55%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           +V  L++ +L   +D+  +   F+  G   S K++ +   G+ +G+GFV F+S   A + 
Sbjct: 292 QVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349

Query: 498 LQTFNGQMM 524
           +   NG+++
Sbjct: 350 VTEMNGRIV 358

---

>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 346

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 18/57 (31%), Positives = 33/57 (57%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           ++IG L +    + +   F+  GE +   ++RD  T + +G+GFV FA  A+ ++VL
Sbjct: 23  MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 79

---

>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 328

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 18/57 (31%), Positives = 33/57 (57%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           ++IG L +    + +   F+  GE +   ++RD  T + +G+GFV FA  A+ ++VL
Sbjct: 23  MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 79

---

>NOP12_YEAST (Q08208) Nucleolar protein 12|
          Length = 459

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 16/62 (25%), Positives = 36/62 (58%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D+ R++++G+L +   E  ++  F   G+ + V++IRD +T   +G+ +V+F    +  +
Sbjct: 276 DKKRSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNK 335

Query: 495 VL 500
            L
Sbjct: 336 AL 337

---

>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor|
           50 kDa subunit) (U2 snRNP auxiliary factor large
           subunit)
          Length = 416

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 16/75 (21%), Positives = 39/75 (52%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    ++IG L  +++++ +     + G+ ++  L++D  TG  +GY F E+   +  ++
Sbjct: 204 DSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEYVDLSITDQ 263

Query: 495 VLQTFNGQMMPNVEL 539
            +   NG  + + +L
Sbjct: 264 SIAGLNGMQLGDKKL 278

---

>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage|
           factor IB) (CFIB)
          Length = 534

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 18/65 (27%), Positives = 36/65 (55%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S E   ++IG L +   E+ +   F   G    +K+++D  TG+ +G+GF+ F   ++ +
Sbjct: 155 SKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVD 214

Query: 492 RVLQT 506
            V++T
Sbjct: 215 EVVKT 219



 Score = 35.8 bits (81), Expect = 0.084
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +3

Query: 384 FANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           F+  G     +L+ DK TGQ +G+GFV + S  A +RV Q
Sbjct: 263 FSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQ 302

---

>NCBP2_XENLA (P52299) Nuclear cap binding protein subunit 2 (20 kDa nuclear cap|
           binding protein) (NCBP 20 kDa subunit) (CBP20)
           (Fragment)
          Length = 148

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           TL++G+L ++  E  I+  F+ +G+ + + +  DK      G+ FVE+ + A A   ++ 
Sbjct: 33  TLYVGNLSFYTTEEQIHELFSKSGDVKRIVMGLDKVKKTACGFCFVEYYTRADAGTAMRF 92

Query: 507 FNG 515
            NG
Sbjct: 93  ING 95

---

>BOLL_MACFA (Q8WP23) Protein boule-like|
          Length = 283

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 17/58 (29%), Positives = 35/58 (60%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           +++G + +  +E+ +   F+  G  + VK++ D+  G  +GYGFV F +   A+++LQ
Sbjct: 35  IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQ 91

---

>BOLL_HUMAN (Q8N9W6) Protein boule-like|
          Length = 283

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 17/58 (29%), Positives = 35/58 (60%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           +++G + +  +E+ +   F+  G  + VK++ D+  G  +GYGFV F +   A+++LQ
Sbjct: 35  IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQ 91

---

>NOP12_KLULA (Q6CKV6) Nucleolar protein 12|
          Length = 524

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 16/62 (25%), Positives = 36/62 (58%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D+ R++++G+L +   E  ++  F   G+ + V++IRD +T   +G+ +V+F    +  +
Sbjct: 356 DKRRSVFVGNLDFEEVEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDFQSVSK 415

Query: 495 VL 500
            L
Sbjct: 416 AL 417

---

>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)|
          Length = 169

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 16/62 (25%), Positives = 34/62 (54%)
 Frame = +3

Query: 333 WIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFN 512
           ++G L +  ++  +   F+  G+    K+I D+++G+ +G+GFV F    A    ++  N
Sbjct: 9   FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68

Query: 513 GQ 518
           G+
Sbjct: 69  GK 70

---

>DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1|
          Length = 476

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +3

Query: 354 WMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMM-PN 530
           +  E+ +   F+  G+ Q + ++RDK T + +G  FV+FA  + A R ++  +GQ + PN
Sbjct: 35  YTSESVLREHFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPN 94

---

>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10|
          Length = 169

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = +3

Query: 333 WIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFN 512
           ++G L +   +  +   F+  GE    K+I D++TG+ +G+GFV F    + +  +   N
Sbjct: 9   FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68

Query: 513 GQ 518
           G+
Sbjct: 69  GK 70

---

>DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding protein 1 (RB-1)|
          Length = 476

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = +3

Query: 363 ENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMM-PN 530
           E+ +   F+  G+ Q + ++RDK T + +G  FV+FA  + A R ++  +GQ + PN
Sbjct: 38  ESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPN 94

---

>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 668

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 19/65 (29%), Positives = 34/65 (52%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++I +L   +D   +Y  F++ G   S K+  D   G+ +GYGFV+F     A+  +   
Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKL 192

Query: 510 NGQMM 524
           NG ++
Sbjct: 193 NGMLL 197



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 16/62 (25%), Positives = 33/62 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++ +L   + ++ +   F   G+  S  +++D Q+G  + +GFV F S  AA   ++  
Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKM 285

Query: 510 NG 515
           NG
Sbjct: 286 NG 287



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/65 (24%), Positives = 36/65 (55%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L   +++  +   F+  G   S K++ + Q G  +G+GFV +++   A   ++  
Sbjct: 330 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEM 388

Query: 510 NGQMM 524
           NG+M+
Sbjct: 389 NGKMI 393

---

>YHH5_YEAST (P38760) Hypothetical 75.9 kDa protein in SPO13-ARG4 intergenic|
           region
          Length = 659

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           + +  +L+IG+L+  + E  +   F     F+S K+ RD  T +  GYG++ F     AE
Sbjct: 107 TSKTNSLFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAE 166

Query: 492 RVLQTFN 512
              + FN
Sbjct: 167 SARKEFN 173

---

>RBM7_MOUSE (Q9CQT2) RNA-binding protein 7 (RNA-binding motif protein 7)|
          Length = 265

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 19/64 (29%), Positives = 33/64 (51%)
 Frame = +3

Query: 324 RTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           RTL++G+L+  + E  ++  F   G    VK+ +DK  G+L+ + FV F    +    + 
Sbjct: 10  RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKD-GKLKQFAFVNFKHEVSVPYAMN 68

Query: 504 TFNG 515
             NG
Sbjct: 69  LLNG 72

---

>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 276

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++IG +   + E  +   F+  G    ++L R K+TG  +GY +VEF     A+ V  T 
Sbjct: 43  IYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADTM 102

Query: 510 NGQM 521
           N  +
Sbjct: 103 NNYL 106

---

>NAM8_YEAST (Q00539) Protein NAM8|
          Length = 523

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQS-VKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           ++++GDL   + E+ ++  F N     S  K++ D+ TG  +GYGFV+F +    +  L 
Sbjct: 164 SIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALS 223

Query: 504 TFNG 515
              G
Sbjct: 224 EMQG 227



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQ-SVKLIRDKQTG----------QLQGYGFVEFAS 476
           L++GDL    D+N +   +A+ GE   +V+++ +                QGY FV+F S
Sbjct: 56  LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115

Query: 477 HAAAERVLQTFNGQMMPN 530
              A   L   NG ++PN
Sbjct: 116 STHAANALLK-NGMLIPN 132

---

>DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding protein 1 (RB-1)|
          Length = 476

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +3

Query: 384 FANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMM 524
           F+  G+ Q + ++RDK T + +G  FV+FA  + A R ++  +GQ +
Sbjct: 45  FSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQACRAMEEMHGQCL 91

---

>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1|
           (Single-stranded DNA-binding protein MSSP-1)
          Length = 403

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = +3

Query: 396 GEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           G+  S K I DK T + +GYGFV+F S AAA++ +
Sbjct: 86  GKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAV 120



 Score = 34.7 bits (78), Expect = 0.19
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L+I +L   MDE  + +     G+  S +++RD  +G  +G GF    S    E V+  F
Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRVLRDS-SGASRGVGFARMESTEKCEAVIGHF 201

Query: 510 NGQMM 524
           NG+ +
Sbjct: 202 NGKFI 206

---

>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1|
           (Single-stranded DNA-binding protein MSSP-1) (Suppressor
           of CDC2 with RNA-binding motif 2)
          Length = 406

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = +3

Query: 396 GEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           G+  S K I DK T + +GYGFV+F S AAA++ +
Sbjct: 86  GKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAV 120



 Score = 35.0 bits (79), Expect = 0.14
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L+I +L   MDE  + +     G+  S +++RD  +G  +G GF    S    E V+  F
Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHF 201

Query: 510 NGQMM 524
           NG+ +
Sbjct: 202 NGKFI 206

---

>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70)
          Length = 448

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEF 470
           D  RTL+I  + Y   E+ +   F   G  + + LI D+++G+ +GY F+E+
Sbjct: 99  DPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEY 150

---

>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3)
           (AtRBP33) (RNA-binding protein cp31)
          Length = 329

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 14/63 (22%), Positives = 34/63 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++G+L + +D   +   F+  G+    +++ D++TG+ +G+GFV  +        +   
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305

Query: 510 NGQ 518
           +GQ
Sbjct: 306 DGQ 308

---

>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 653

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 18/61 (29%), Positives = 33/61 (54%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++I +L   + E      F   GE  S+ L++D Q  + +G+GFV +A+H  A++ +   
Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKD-QNDKPRGFGFVNYANHECAQKAVDEL 321

Query: 510 N 512
           N
Sbjct: 322 N 322



 Score = 36.2 bits (82), Expect = 0.064
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           +L++G+L   + E  ++  F + G   S+++ RD  T +  GY +V F +    E+ L  
Sbjct: 81  SLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDE 140

Query: 507 FN 512
            N
Sbjct: 141 LN 142



 Score = 35.0 bits (79), Expect = 0.14
 Identities = 19/65 (29%), Positives = 35/65 (53%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++I +L   +D   ++  F+  G+  S K+  D + G  +GYGFV F S  +A   ++  
Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEHV 228

Query: 510 NGQMM 524
           NG ++
Sbjct: 229 NGMLL 233

---

>RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)|
          Length = 165

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++  +     E+ I   F + GE +++ L  D++TG  +GY  VE+ +H  A    +  
Sbjct: 75  LFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEAL 134

Query: 510 NG 515
           NG
Sbjct: 135 NG 136

---

>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly|
           U-binding splicing factor) (Protein half pint) (PUF60
           homolog)
          Length = 637

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++G + + + E+ I   F   G  +S+ +  D  T + +G+ FVE+     A+  L+  
Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191

Query: 510 NGQMM 524
           NG +M
Sbjct: 192 NGALM 196



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           +++  +   + E  I S F   G     KL +       +GYGF+E+A+  A +  + + 
Sbjct: 229 IYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASM 288

Query: 510 N 512
           N
Sbjct: 289 N 289

---

>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 427

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D  +TL++  L Y   E+ I   F + G  + V L+ D+ T + +GY F+E+      + 
Sbjct: 135 DPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKA 194

Query: 495 VLQTFNGQ 518
             +  +GQ
Sbjct: 195 AYKQADGQ 202

---

>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2|
           (Suppressor of CDC2 with RNA-binding motif 3)
          Length = 407

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           L+I  LQ    +  +       G+  S K I DK T + +GYGFV+F S +AA++ +
Sbjct: 58  LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAV 114



 Score = 33.9 bits (76), Expect = 0.32
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L+I +L   MDE  +       G+  S +++RD  +G  +G GF    S    E ++  F
Sbjct: 137 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCEAIITHF 195

Query: 510 NGQ 518
           NG+
Sbjct: 196 NGK 198

---

>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast|
           precursor (PSRP-2)
          Length = 260

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++IG+L   +    +   F+  G+    K+ R   T +  G+GFV F+S    E  +Q  
Sbjct: 186 VYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQAL 245

Query: 510 NGQMM 524
           N  ++
Sbjct: 246 NNSVL 250

---

>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic|
           region
          Length = 781

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +3

Query: 324 RTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           ++L IG+L +          F+  G   S+KLI DK  G+  GYGF+ +   + A   ++
Sbjct: 204 KSLSIGELSF---------LFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIK 254

Query: 504 TFNGQ 518
             NG+
Sbjct: 255 ELNGR 259



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 444 LQGYGFVEFASHAAAERVLQTFNGQM 521
           L+GYGF++  +H  A   ++TFNG M
Sbjct: 380 LKGYGFIKLINHEQALAAIETFNGFM 405



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 20/71 (28%)
 Frame = +3

Query: 354 WMDENYIYSCFANTGEFQSVKLI-------------------RDKQTGQLQGYGFVEFAS 476
           W DE+ +Y  + + GE  SVK+I                    D   G  +GYGFV F S
Sbjct: 551 WTDED-LYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSSRGYGFVSFES 609

Query: 477 HA-AAERVLQT 506
              AA+ +L T
Sbjct: 610 PLDAAKAILNT 620

---

>HSH49_YEAST (Q99181) Protein HSH49|
          Length = 213

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 16/67 (23%), Positives = 32/67 (47%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           +D   T+++G++   + +  +Y  F        +K  +DK     QGY F+EF +   A+
Sbjct: 5   ADSGNTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQ 64

Query: 492 RVLQTFN 512
             ++  N
Sbjct: 65  YAIKIMN 71

---

>G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protein 2 (GAP|
           SH3-domain-binding protein 2) (G3BP-2)
          Length = 482

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT- 506
           L++G+L + +DEN +   F + G    +++      G+L  +GFV F      +R+L   
Sbjct: 333 LFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAK 392

Query: 507 ---FNGQMMPNVE 536
              F G++  NVE
Sbjct: 393 PIMFRGEVRLNVE 405

---

>G3B2_HUMAN (Q9UN86) Ras-GTPase-activating protein-binding protein 2 (GAP|
           SH3-domain-binding protein 2) (G3BP-2)
          Length = 482

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT- 506
           L++G+L + +DEN +   F + G    +++      G+L  +GFV F      +R+L   
Sbjct: 333 LFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAK 392

Query: 507 ---FNGQMMPNVE 536
              F G++  NVE
Sbjct: 393 PIMFRGEVRLNVE 405

---

>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           ++IG L +   +  +   F   GE +   ++RD  T + +G+GFV F   A  ++VL
Sbjct: 22  MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL 78

---

>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           ++IG L +   +  +   F   GE +   ++RD  T + +G+GFV F   A  ++VL
Sbjct: 22  MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL 78

---

>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           ++IG L +   +  +   F   GE +   ++RD  T + +G+GFV F   A  ++VL
Sbjct: 22  MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL 78

---

>PES4_YEAST (P39684) Protein PES4 (DNA polymerase epsilon suppressor 4)|
          Length = 611

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S ++  L+IGDL   + E  +   F     F S K+  D  T +  G+G++ F     AE
Sbjct: 87  SKKLVPLFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAE 146

Query: 492 RVLQTFN 512
           + ++  N
Sbjct: 147 KAMEELN 153

---

>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 278

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++IG +   + E  +   F   G    ++L R K+TG  +GY +VE+     A+ V  T 
Sbjct: 43  IYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVADTM 102

Query: 510 NGQM 521
           N  +
Sbjct: 103 NNYL 106

---

>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2|
          Length = 383

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           L+I  LQ    +  +       G+  S K I DK T + +GYGFV+F S ++A++ +
Sbjct: 60  LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAV 116



 Score = 33.9 bits (76), Expect = 0.32
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L+I +L   MDE  +       G+  S +++RD  +G  +G GF    S    E ++  F
Sbjct: 139 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGASRGVGFARMESTEKCEAIITHF 197

Query: 510 NGQ 518
           NG+
Sbjct: 198 NGK 200

---

>RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif protein 7)|
          Length = 266

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = +3

Query: 324 RTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           RTL++G+L+  + E  ++  F   G    VK+ +DK  G+ + + FV F    +    + 
Sbjct: 10  RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKD-GKPKQFAFVNFKHEVSVPYAMN 68

Query: 504 TFNG 515
             NG
Sbjct: 69  LLNG 72

---

>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1|
          Length = 841

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 18/69 (26%), Positives = 35/69 (50%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           +E   L+I ++ Y   E    S F+  G  + V +  D +TG+ +G+ +V+F     A R
Sbjct: 307 EETGRLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATR 366

Query: 495 VLQTFNGQM 521
             ++ + Q+
Sbjct: 367 AYRSLDKQI 375

---

>U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (U2AF65)
          Length = 488

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 18/79 (22%), Positives = 36/79 (45%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    ++IG L  ++ E+ +     + G  ++  L  D Q G  +GY F E+      ++
Sbjct: 279 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQ 337

Query: 495 VLQTFNGQMMPNVELAYRL 551
            +   NG  + + +L  +L
Sbjct: 338 AIAGLNGMQLGDKQLVVQL 356

---

>U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (U2AF65)
          Length = 496

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 18/79 (22%), Positives = 36/79 (45%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D    ++IG L  ++ E+ +     + G  ++  L  D Q G  +GY F E+      ++
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQ 346

Query: 495 VLQTFNGQMMPNVELAYRL 551
            +   NG  + + +L  +L
Sbjct: 347 AIAGLNGMQLGDKQLVVQL 365

---

>RSD1_SCHPO (O13845) RNA-binding protein rsd1|
          Length = 604

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 14/59 (23%), Positives = 30/59 (50%)
 Frame = +3

Query: 324 RTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           RT+++  L   +    +Y  F   G  +  +++RDK +G+ +G  +VEF    + +  +
Sbjct: 240 RTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAI 298



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/62 (22%), Positives = 34/62 (54%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L + ++ + + +  + + F   G+ + V L RD Q  + +G+G++++ +  +A   L+  
Sbjct: 342 LCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDDQN-RSKGFGYIQYRNPISARNALEKM 400

Query: 510 NG 515
           NG
Sbjct: 401 NG 402

---

>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)|
           (hnRNP 48) (HRP48.1)
          Length = 421

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           DE   L++G L +   +  +   F   G+     ++++ ++G+ +G+GFV FA       
Sbjct: 4   DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63

Query: 495 VLQ 503
           VLQ
Sbjct: 64  VLQ 66

---

>RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif protein 7)|
          Length = 262

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = +3

Query: 324 RTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           RTL++G+L+  + E  ++  F   G    VK+ +DK  G+ + + FV F    +    + 
Sbjct: 10  RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKD-GKPKQFAFVNFKHEVSVPYAMN 68

Query: 504 TFNG 515
             NG
Sbjct: 69  LLNG 72

---

>IF34_SCHPO (P78795) Probable eukaryotic translation initiation factor 3|
           RNA-binding subunit (eIF-3 RNA-binding subunit) (eIF3
           p33) (Translation initiation factor eIF3, p33 subunit)
          Length = 282

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           D+  TL + +L     E  +   F   G  Q V L +DK+TG+ +G+ FV +     A +
Sbjct: 199 DDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIK 258

Query: 495 VLQTFNGQMMPNVEL 539
                +G    N+ L
Sbjct: 259 ARDRLDGYGWNNLIL 273

---

>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (Eif3p42) (eIF3g)
          Length = 320

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           +D+  T+ + +L     E  +   F   G    + L +DK TGQ +G+ F+ F     A 
Sbjct: 235 ADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAA 294

Query: 492 RVLQTFNG----QMMPNVELA 542
           R +   +G     ++ NVE A
Sbjct: 295 RAIAGVSGFGYDHLILNVEWA 315

---

>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (eIF3g)
          Length = 320

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           +D+  T+ + +L     E  +   F   G    + L +DK TGQ +G+ F+ F     A 
Sbjct: 235 ADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAA 294

Query: 492 RVLQTFNG----QMMPNVELA 542
           R +   +G     ++ NVE A
Sbjct: 295 RAIAGVSGFGYDHLILNVEWA 315

---

>RNP24_SCHPO (Q09100) RNA-binding protein rnp24|
          Length = 369

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 14/47 (29%), Positives = 29/47 (61%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEF 470
           L++G+L +   +  +   F   G+ + V+L+  + TG+ +G+GFV+F
Sbjct: 230 LFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDF 276

---

>IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SNU17)|
           (Increased sodium tolerance protein 3)
          Length = 148

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           ++IG+L   + E  I + F+  G    V L RD+ TG+ QG+ ++++    +    +   
Sbjct: 33  IYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNL 92

Query: 510 NG 515
           NG
Sbjct: 93  NG 94

---

>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1)
          Length = 371

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFAS 476
           +++R L+IG L +   +  + S F   G      ++RD  T + +G+GFV +A+
Sbjct: 10  EQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 63

---

>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (APOBEC-1-binding protein 1) (ABBP-1)
          Length = 331

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           ++   +++G L +   +  +   F   GE     +  D  TG+ +G+GF+ F   A+ E+
Sbjct: 65  EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 124

Query: 495 VL 500
           VL
Sbjct: 125 VL 126

---

>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1) (HDP)
          Length = 319

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFAS 476
           +++R L+IG L +   +  + S F   G      ++RD  T + +G+GFV +A+
Sbjct: 10  EQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 63

---

>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1) (HDP-1)
           (Topoisomerase-inhibitor suppressed)
          Length = 319

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFAS 476
           +++R L+IG L +   +  + S F   G      ++RD  T + +G+GFV +A+
Sbjct: 10  EQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 63

---

>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 319

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFAS 476
           +++R L+IG L +   +  + S F   G      ++RD  T + +G+GFV +A+
Sbjct: 10  EQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 63

---

>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1|
           (hnRNP A3(A))
          Length = 373

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 15/53 (28%), Positives = 31/53 (58%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFA 473
           +++R L+IG L +   ++ +   F   G+     ++RD QT + +G+GFV ++
Sbjct: 24  EQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYS 76

---

>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2|
           (hnRNP A3(B))
          Length = 385

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 15/53 (28%), Positives = 31/53 (58%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFA 473
           +++R L+IG L +   ++ +   F   G+     ++RD QT + +G+GFV ++
Sbjct: 24  EQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYS 76

---

>NOP12_CANAL (Q5AHI7) Nucleolar protein 12|
          Length = 454

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANT--GEFQSVKLIRDKQTGQLQGYGFVEFASHAAA 488
           D  RT+++G+L +   E  ++  F +    + +SV++IRD +T   +G+  V+F    + 
Sbjct: 262 DNKRTIFVGNLDFEEKEETLWKYFNSKLDQDVESVRIIRDSKTNLGKGFALVQFKDTLSV 321

Query: 489 ERVL 500
            + L
Sbjct: 322 NKAL 325

---

>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1) (Unwinding protein 1)
           (UP1) (Fragment)
          Length = 195

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFAS 476
           +++R L+IG L +   +  + S F   G      ++RD  T + +G+GFV +A+
Sbjct: 10  EQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 63

---

>NUCL_PONPY (Q5RF26) Nucleolin|
          Length = 711

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S E +TL + +L Y   E  +   F    E  +   +   Q G+ +GY F+EFAS   A+
Sbjct: 483 SGESKTLVLSNLSYSATEETLQEVF----EKATFIKVPQNQNGKSKGYAFIEFASFEDAK 538

Query: 492 RVLQTFN 512
             L + N
Sbjct: 539 EALNSCN 545

---

>NUCL_HUMAN (P19338) Nucleolin (Protein C23)|
          Length = 709

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S E +TL + +L Y   E  +   F    E  +   +   Q G+ +GY F+EFAS   A+
Sbjct: 481 SGESKTLVLSNLSYSATEETLQEVF----EKATFIKVPQNQNGKSKGYAFIEFASFEDAK 536

Query: 492 RVLQTFN 512
             L + N
Sbjct: 537 EALNSCN 543

---

>IF39_YEAST (P06103) Eukaryotic translation initiation factor 3 90 kDa subunit|
           (eIF3 p90) (Cell cycle regulation and translation
           initiation protein)
          Length = 763

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 17/58 (29%), Positives = 37/58 (63%)
 Frame = +3

Query: 378 SCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPNVELAYRL 551
           S F+  G+  +++   D+ TG+ +G+ FVE  S   A++++++F+G+    ++L +RL
Sbjct: 101 SLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGK---RLDLKHRL 155

---

>NUCL_MACFA (Q4R4J7) Nucleolin|
          Length = 710

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S E +TL + +L Y   E  +   F    E  +   +   Q G+ +GY F+EFAS   A+
Sbjct: 482 SGESKTLVLSNLSYSATEETLQEVF----EKATFIKVPQNQNGKSKGYAFIEFASFEDAK 537

Query: 492 RVLQTFN 512
             L + N
Sbjct: 538 EALNSCN 544

---

>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 960

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQL---QGYGFVEFASHAAAERV 497
           TL+I +L +   E  +   F+  G  +S  + + K    +    G+GFVE+     A++ 
Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790

Query: 498 LQTFNGQMMPNVELAYRLN 554
           L+   G ++   +L  R++
Sbjct: 791 LKQLQGHVVDGHKLEVRIS 809

---

>PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 461

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +3

Query: 384 FANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMM 524
           F+  G+  S ++IRDK+TG    Y F+EF S    E+      G ++
Sbjct: 268 FSRFGKILSCEVIRDKRTGDSLQYAFIEFESQKDCEQAYFKMQGVLI 314

---

>NUCL_MESAU (P08199) Nucleolin (Protein C23)|
          Length = 713

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           S E +TL + +L Y   E  +   F    E  +   +   Q G+ +GY F+EFAS   A+
Sbjct: 481 SGESKTLVLSNLSYSATEETLQEVF----EKATFIKVPQNQQGKSKGYAFIEFASFEDAK 536

Query: 492 RVLQTFN 512
             L + N
Sbjct: 537 EALNSCN 543

---

>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (CArG-binding factor-A) (CBF-A)
          Length = 285

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 15/62 (24%), Positives = 31/62 (50%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           ++   +++G L +   +  +   F   GE     +  D  TG+ +G+GF+ F   ++ E+
Sbjct: 72  EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131

Query: 495 VL 500
           VL
Sbjct: 132 VL 133

---

>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 952

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQL---QGYGFVEFASHAAAERV 497
           TL+I +L +   E  +   F+  G  +S  + + K    +    G+GFVE+     A++ 
Sbjct: 723 TLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKA 782

Query: 498 LQTFNGQMMPNVELAYRLN 554
           L+   G  +   +L  R++
Sbjct: 783 LKQLQGHTVDGHKLEVRIS 801

---

>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 378

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFA 473
           +++R L+IG L +   ++ +   F   G      ++RD QT + +G+GFV ++
Sbjct: 32  EQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYS 84

---

>IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H (eIF-4H)|
           (Williams-Beuren syndrome chromosome region 1 protein
           homolog)
          Length = 247

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 19/66 (28%), Positives = 39/66 (59%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           T ++G+L +   +  I + F +    +SV+L+RDK T + +G+ +VEF    + +  L T
Sbjct: 42  TAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEAL-T 99

Query: 507 FNGQMM 524
           ++G ++
Sbjct: 100 YDGALL 105

---

>IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H (eIF-4H)|
           (Williams-Beuren syndrome chromosome region 1 protein)
          Length = 247

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 19/66 (28%), Positives = 39/66 (59%)
 Frame = +3

Query: 327 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 506
           T ++G+L +   +  I + F +    +SV+L+RDK T + +G+ +VEF    + +  L T
Sbjct: 42  TAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEAL-T 99

Query: 507 FNGQMM 524
           ++G ++
Sbjct: 100 YDGALL 105

---

>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 379

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFA 473
           +++R L+IG L +   ++ +   F   G      ++RD QT + +G+GFV ++
Sbjct: 32  EQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYS 84

---

>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 379

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFA 473
           +++R L+IG L +   ++ +   F   G      ++RD QT + +G+GFV ++
Sbjct: 32  EQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYS 84

---

>RBM5_HUMAN (P52756) RNA-binding protein 5 (RNA-binding motif protein 5)|
           (Putative tumor suppressor LUCA15) (G15 protein)
           (NY-REN-9 antigen)
          Length = 815

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 14/32 (43%), Positives = 24/32 (75%)
 Frame = +3

Query: 408 SVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           +++LI+DKQT Q +G+ FV+ +S   A ++LQ
Sbjct: 261 NIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQ 292

---

>NOP12_DEBHA (Q6BTS9) Nucleolar protein 12|
          Length = 462

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANT--GEFQSVKLIRDKQTGQLQGYGFVEFASHAAA 488
           D  RT+++G+L +   E  ++  F +    + +SV++IRD +T   +G+  V+F    + 
Sbjct: 263 DNKRTIFVGNLDFEEKEETLWRYFNSKTDNDVESVRVIRDAKTNVGKGFALVQFKDTLSV 322

Query: 489 ERVL 500
            + L
Sbjct: 323 NKSL 326

---

>PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 504

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 384 FANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           F+  G+  S +++RDK++G    Y F+EF    AAE+
Sbjct: 266 FSRFGKILSCEVVRDKKSGDSLQYAFIEFDEREAAEQ 302

---

>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)|
           (RNA-binding protein BRUNOL-2) (Deadenylation factor
           CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein
           F41)
          Length = 486

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E   L+I  L     +  +   F   G   S K+  DKQT   + +GFV + +  +A+  
Sbjct: 399 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 458

Query: 498 LQTFNG 515
           +Q+ NG
Sbjct: 459 IQSMNG 464

---

>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)|
           (RNA-binding protein BRUNOL-2) (Deadenylation factor
           CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding
           protein) (EDEN-BP)
          Length = 486

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E   L+I  L     +  +   F   G   S K+  DKQT   + +GFV + +  +A+  
Sbjct: 399 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 458

Query: 498 LQTFNG 515
           +Q+ NG
Sbjct: 459 IQSMNG 464

---

>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 758

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 20/67 (29%), Positives = 36/67 (53%)
 Frame = +3

Query: 312 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           +D+   L I +L +   E+ + + FA  G    V + R K  G+++G+GFV+F +   A 
Sbjct: 109 ADKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAG 167

Query: 492 RVLQTFN 512
           + L+  N
Sbjct: 168 KALKGMN 174

---

>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)|
          Length = 633

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 18/74 (24%), Positives = 35/74 (47%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           +V+ L++ +L   + E  +   F+  G+ + VK ++D        Y FV F    AA + 
Sbjct: 339 KVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKD--------YAFVHFEDRGAAVKA 390

Query: 498 LQTFNGQMMPNVEL 539
           +   NG+ +   E+
Sbjct: 391 MDEMNGKEIEGEEI 404



 Score = 32.3 bits (72), Expect = 0.93
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           +++G +   + E+ +   F   G    ++L+ D  +GQ +GY F+ F    AA+  ++
Sbjct: 167 VFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVK 224

---

>PPIL4_SCHPO (Q9UUE4) Peptidyl-prolyl cis-trans isomerase cyp6 (EC 5.2.1.8)|
           (PPIase cyp6) (Rotamase cyp8)
          Length = 432

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 384 FANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           F+  G+  S ++IRDK+TG    Y F+EF +  + E+
Sbjct: 264 FSRFGKIISCQVIRDKETGDSLQYAFIEFDNKESVEK 300

---

>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 551

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 384 FANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           F+  G+  S ++I+DK+TG    Y F+EF     AER
Sbjct: 282 FSRFGKILSCEVIKDKKTGDSLQYAFIEFDKKDDAER 318

---

>PPIL4_ASPOR (Q2U256) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 461

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 372 IYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMM 524
           ++  F+  G   S ++IRDK+TG    Y F+EF +    E+      G ++
Sbjct: 264 LHLIFSRFGTILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLI 314

---

>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 749

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 405 QSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFN 512
           + +K +  K  GQ  GY F EF  H  A R L+ FN
Sbjct: 515 RDLKGVHGKMKGQSLGYAFAEFQKHEHALRALRHFN 550

---

>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 471

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/52 (25%), Positives = 30/52 (57%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEF 470
           D  +TL++  + Y   E+ +   F   G  + + ++ +K++G+ +GY F+E+
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEY 151

---

>PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 459

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 384 FANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMM 524
           F+  G   S ++IRDK+TG    Y F+EF +    E+      G ++
Sbjct: 268 FSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLI 314

---

>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1|
          Length = 346

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/63 (20%), Positives = 33/63 (52%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           + +R +++G L     ++ +   ++  GE   + ++RD  T + +G+GFV F+     + 
Sbjct: 20  ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDA 79

Query: 495 VLQ 503
            ++
Sbjct: 80  AMK 82

---

>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 437

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/52 (25%), Positives = 29/52 (55%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEF 470
           D  +TL++  + Y   E+ +   F   G  + + ++  K++G+ +GY F+E+
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEY 151

---

>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70|
           kDa) (snRNP70)
          Length = 448

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/52 (25%), Positives = 29/52 (55%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEF 470
           D  +TL++  + Y   E+ +   F   G  + + ++  K++G+ +GY F+E+
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEY 151

---

>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1)
          Length = 623

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           +V+ L++ +L   + E  +   F+  G+ + VK ++D        Y F+ F     A + 
Sbjct: 336 KVKVLFVRNLANTVTEEILEKAFSQFGKLERVKKLKD--------YAFIHFDERDGAVKA 387

Query: 498 LQTFNGQMM--PNVELAY 545
           ++  NG+ +   N+E+ +
Sbjct: 388 MEEMNGKDLEGENIEIVF 405

---

>NUCL_MOUSE (P09405) Nucleolin (Protein C23)|
          Length = 706

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = +3

Query: 333 WIGDLQYWMDENYIYSCFANTGE--FQSVKLIRDKQT--GQLQGYGFVEFASHAAAERVL 500
           W G+ +  +  N  YS    T E  F+    I+  Q   G+ +GY F+EFAS   A+  L
Sbjct: 481 WSGESKTLVLSNLSYSATKETLEEVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEAL 540

Query: 501 QTFN 512
            + N
Sbjct: 541 NSCN 544

---

>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 281

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L +  L  +  E  +   F+  G    V ++ D++TG+ +G+ FV F     ++  ++  
Sbjct: 119 LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERA 178

Query: 510 NG 515
           NG
Sbjct: 179 NG 180

---

>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 282

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L +  L  +  E  +   F+  G    V ++ D++TG+ +G+ FV F     ++  ++  
Sbjct: 121 LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERA 180

Query: 510 NG 515
           NG
Sbjct: 181 NG 182

---

>NUCL_CHICK (P15771) Nucleolin (Protein C23)|
          Length = 694

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E +TL + +L Y   E  +   F       S+K+ ++ Q G+ +GY FVEF +   A+  
Sbjct: 459 ESKTLIVNNLSYAASEETLQELFKKA---TSIKMPQNNQ-GRPKGYAFVEFPTAEDAKEA 514

Query: 498 LQTFN 512
           L + N
Sbjct: 515 LNSCN 519



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +3

Query: 408 SVKLIRDKQTGQLQGYGFVEFAS 476
           S +++ D+ TG  +G+GFV+F+S
Sbjct: 578 SARIVTDRDTGSSKGFGFVDFSS 600

---

>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Liver regeneration-related
           protein LRRG077)
          Length = 533

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           +V+ L++ +L   + E  +   F+  G+ + VK ++D        Y F+ F     A + 
Sbjct: 246 KVKVLFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKA 297

Query: 498 LQTFNGQMM--PNVELAY 545
           ++  NG+ +   N+E+ +
Sbjct: 298 MEEMNGKDLEGENIEIVF 315

---

>TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)|
          Length = 414

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +3

Query: 384 FANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           F+  GE   V++ +D +TG  +G+GFV F  +    +V+
Sbjct: 124 FSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM 162

---

>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)|
          Length = 414

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +3

Query: 384 FANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           F+  GE   V++ +D +TG  +G+GFV F  +    +V+
Sbjct: 124 FSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM 162

---

>PPIL4_GIBZE (Q4IE79) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 605

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +3

Query: 384 FANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMM 524
           F   G+  S ++IRD++TG    Y F+E+   A+ E       G ++
Sbjct: 271 FGRFGKILSCEVIRDQKTGDSLQYAFIEYEDKASCEAAYFKMQGVLI 317

---

>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1) (pp68)
          Length = 623

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           +V+ L++ +L   + E  +   F+  G+ + VK ++D        Y F+ F     A + 
Sbjct: 336 KVKVLFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKA 387

Query: 498 LQTFNGQMM--PNVELAY 545
           ++  NG+ +   N+E+ +
Sbjct: 388 MEEMNGKDLEGENIEIVF 405

---

>NUCL_RAT (P13383) Nucleolin (Protein C23)|
          Length = 712

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = +3

Query: 333 WIGDLQYWMDENYIYSCFANTGE--FQSVKLIRDKQT--GQLQGYGFVEFASHAAAERVL 500
           W G+ +  +  N  YS    T +  F+    I+  Q   G+ +GY F+EFAS   A+  L
Sbjct: 483 WSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNPHGKSKGYAFIEFASFEDAKEAL 542

Query: 501 QTFN 512
            + N
Sbjct: 543 NSCN 546

---

>PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-binding protein|
           crp79) (Poly(A)-binding protein) (PABP) (Meiotic
           expression up-regulated protein 5)
          Length = 710

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +3

Query: 384 FANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMM 524
           F+  G   S  L     +G  +GYGFV F    AA R   T NG M+
Sbjct: 404 FSPFGSILSSMLACYPNSGISKGYGFVAFRQIEAAVRAKDTLNGMMV 450

---

>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1|
           (hnRNP A2(A))
          Length = 346

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/64 (23%), Positives = 31/64 (48%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAER 494
           ++ R L+IG L +   E  + + +   G      ++RD  + + +G+GFV F+     + 
Sbjct: 6   EQFRKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDA 65

Query: 495 VLQT 506
            + T
Sbjct: 66  AMAT 69

---

>RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1|
          Length = 283

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 336 IGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQL-QGYGFVEFASHAAAERVLQTFN 512
           IG L   + +++I   F+  G+ + + +  D+    L +GY +VEF +   AE+ L+  +
Sbjct: 142 IGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMD 201

Query: 513 GQMMPNVEL 539
           G  +   E+
Sbjct: 202 GGQIDGQEI 210

---

>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)|
           (SMART/HDAC1-associated repressor protein)
          Length = 3644

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E R LW+G+L   + E  I   F   G  +SVK++  K+  +     FV+F    +A++ 
Sbjct: 4   ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKIL-PKRGSEGGVAAFVDFVDIKSAQKA 62

Query: 498 LQTFN 512
             + N
Sbjct: 63  HNSVN 67

---

>RBM10_HUMAN (P98175) RNA-binding protein 10 (RNA-binding motif protein 10)|
           (DXS8237E)
          Length = 929

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +3

Query: 405 QSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           + V+L+R+K +GQ +G+ FVEF+    A R ++
Sbjct: 157 REVRLMRNKSSGQSRGFAFVEFSHLQDATRWME 189

---

>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 494

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 384 FANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 491
           F+  G+  S ++IRD++TG    Y F+EF    + E
Sbjct: 273 FSRFGKILSCEVIRDQKTGDSLQYAFIEFEDKKSCE 308

---

>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP|
           A1) (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 365

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +3

Query: 315 DEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFAS 476
           +++R L+IG L +   +  +   F   G      ++RD  + + +G+GFV + S
Sbjct: 11  EQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLS 64

---

>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1|
          Length = 828

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTF 509
           L++ +L Y   E      F+  GE + V L  + +TGQ +G+  V+F     A    +  
Sbjct: 303 LFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEAQ 362

Query: 510 NGQM 521
           +G++
Sbjct: 363 DGKI 366

---

>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)|
           (SMART/HDAC1-associated repressor protein)
          Length = 3664

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = +3

Query: 318 EVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERV 497
           E R LW+G+L   + E  I   F   G  +SVK++  K+  +     FV+F    +A++ 
Sbjct: 4   ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKIL-PKRGSEGGVAAFVDFVDIKSAQKA 62

Query: 498 LQTFN 512
             + N
Sbjct: 63  HNSVN 67

---

>RBM10_RAT (P70501) RNA-binding protein 10 (RNA-binding motif protein 10)|
           (S1-1 protein)
          Length = 852

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +3

Query: 405 QSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQ 503
           + V+L+R+K +GQ +G+ FVEF+    A R ++
Sbjct: 80  REVRLMRNKSSGQSRGFAFVEFSHLQDATRWME 112

---

>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           ++IG L +   +  +   F+  GE     L  D  TG+ +G+GFV F    + ++V+
Sbjct: 99  MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVM 155

---

>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = +3

Query: 330 LWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 500
           ++IG L +   +  +   F+  GE     L  D  TG+ +G+GFV F    + ++V+
Sbjct: 99  MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVM 155

---

>NOP12_NEUCR (Q7S2L7) Nucleolar protein 12|
          Length = 594

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 396 GEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMP 527
           G+ +SV+++RD  T   +G+ +V+F    A E  +   NG+  P
Sbjct: 370 GKVESVRVVRDPVTRVGKGFAYVQFCDENAVESAI-LLNGKKFP 412


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,816,563
Number of Sequences: 219361
Number of extensions: 471639
Number of successful extensions: 2032
Number of sequences better than 10.0: 266
Number of HSP's better than 10.0 without gapping: 1828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2016
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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