>MYSP_BLOTA (Q8MUF6) Paramyosin (Allergen Blo t 11)|
          Length = 875

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
 Frame = -1

Query: 400 DAHHSRKVDARFTDEELKLETWRNERELILVNRKRDAALFAAEEAEVR--CQESAKHAEN 227
           DAH       R  ++E++++   NERE +    K    L   EEA+ +    E A+   +
Sbjct: 442 DAHR------RIHEQEIEIKRLENEREELAAAYKEAETLRKQEEAKNQRLTAELAQTRHD 495

Query: 226 LEKDLAKLGRQISYLSKEV-IELRWLHMVMGESK 128
            EK LA+   +I  L K+  IE+  L+M + E++
Sbjct: 496 YEKRLAQKEEEIEALRKQYQIEIEQLNMRLAEAE 529

>SYS_PYRAB (Q9UZ21) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 455

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = -1

Query: 382 KVDARFTDEELKLETWRNERELILVN-RKRDAALFAAEEAEVRCQESAKHAENLEKDLAK 206
           K+DA +  +  ++   R+ER  I +   KR       EE   + +E  K  E+LEK++ +
Sbjct: 35  KLDAEWRAKLKEINKLRHERNKIAIEIGKRRKKGEPVEELLAKSKEIVKRIESLEKEVEE 94

Query: 205 LGRQISYLSKEVIELRWLHMVMGESKD 125
           L ++I Y    +  +    + +GES++
Sbjct: 95  LKKKIDYYLWRLPNITHPSVPIGESEE 121

>MYSP_SARSC (Q9BMM8) Paramyosin|
          Length = 876

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
 Frame = -1

Query: 400 DAHHSRKVDARFTDEELKLETWRNERELILVNRKRDAALFAAEEAEVR--CQESAKHAEN 227
           DAH       R  ++E++++   NERE +    K    L   EEA+ +    E A+   +
Sbjct: 442 DAHR------RIHEQEIEIKRLENEREELSAAYKEAETLRKQEEAKNQRLTAELAQVRHD 495

Query: 226 LEKDLAKLGRQISYLSKEV-IELRWLHMVMGESK 128
            EK LA+   +I  L K+  IE+  L+M + E++
Sbjct: 496 YEKRLAQKEEEIEALRKQYQIEIEQLNMRLAEAE 529

>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)|
          Length = 1426

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
 Frame = +1

Query: 145  PCEATSVQSLPYLGRRSVAP------TLPSPSPGFRHA*QIPDT*PQLPLQQK 285
            P  A S++S P LG  + +P      +LP+PSPG+  + + P   P +P   K
Sbjct: 899  PAAAASIKSPPVLGSAAASPVHLKSPSLPAPSPGWTSSPKPPLQSPGIPPNHK 951

>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)|
          Length = 1425

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
 Frame = +1

Query: 145  PCEATSVQSLPYLGRRSVAP------TLPSPSPGFRHA*QIPDT*PQLPLQQK 285
            P  A S++S P LG  + +P      +LP+PSPG+  + + P   P +P   K
Sbjct: 898  PAAAASIKSPPVLGSAAASPVHLKSPSLPAPSPGWTSSPKPPLQSPGIPPNHK 950

>TUFT1_BOVIN (P27628) Tuftelin (Enamelin)|
          Length = 390

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = -1

Query: 412 LETADAHHSRKVDARFTDEELKLETWRNERELILVN-RKRDAALFAAEEAEVRCQESAKH 236
           L+ A+    +K +A   + + +L+    E + IL   R+ + AL       V CQ   + 
Sbjct: 215 LQRAEDRAEQK-EAEVGELQRRLQGMETEYQAILAKVREGETALEELRSKNVDCQAEQEK 273

Query: 235 AENLEKDLAKLGRQISYL 182
           A NLEK++A L  +I +L
Sbjct: 274 AANLEKEVAGLREKIHHL 291

>MYSP_DERFA (Q967Z0) Paramyosin (Allergen Der f 11) (Antigen Df642) (Fragment)|
          Length = 692

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
 Frame = -1

Query: 400 DAHHSRKVDARFTDEELKLETWRNERELILVNRKRDAALFAAEEAEVR--CQESAKHAEN 227
           DAH       R  ++E++++   NER+ +    K    L   EEA+ +    E A+   +
Sbjct: 356 DAHR------RIHEQEIEIKRLENERDELSAAYKEAETLRKQEEAKNQRLIAELAQVRHD 409

Query: 226 LEKDLAKLGRQISYLSKEV-IELRWLHMVMGESK 128
            EK LA+   +I  L K+  IE+  L+M + E++
Sbjct: 410 YEKRLAQKDEEIEALRKQYQIEIEQLNMRLAEAE 443

>DNLI_SCHPO (P12000) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase|
           [ATP])
          Length = 768

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = -1

Query: 448 SVLSAIQYGCYTLETADAHHSRKVDARFTDEELKLETWRNERELILVNRKRD 293
           SV  A   GCY  +T       K+   F++E L  ET+ N+ + I++++K+D
Sbjct: 622 SVYGAFLLGCYDPDTETVQSICKLGTGFSEEHL--ETFYNQLKDIVISKKKD 671

>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 115 PNPSPWIHP*PCEATSVQSLPYLGRRSVAPTLPSPSP 225
           P+PSP   P P  + S +S P    R  +P  PSPSP
Sbjct: 163 PSPSPSPSPSPSPSPSPRSTPIPHPRKRSPASPSPSP 199

>GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p230) (256 kDa|
            golgin) (Golgin-245) (Protein 72.1)
          Length = 2230

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/70 (27%), Positives = 37/70 (52%)
 Frame = -1

Query: 361  DEELKLETWRNERELILVNRKRDAALFAAEEAEVRCQESAKHAENLEKDLAKLGRQISYL 182
            +E +K +T  NE +  L  +       A +E +++      H E LE DL K  ++ ++L
Sbjct: 1099 EEGVKQDTTLNELQEQLKQKSAHVNSLAQDETKLKA-----HLEKLEVDLNKSLKENTFL 1153

Query: 181  SKEVIELRWL 152
             ++++EL+ L
Sbjct: 1154 QEQLVELKML 1163

>VIME_ONCMY (P48674) Vimentin|
          Length = 461

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = -1

Query: 385 RKVDARFTDEELKLETWRNE--RELILVNRKRDAALFAAEEAEVRCQESAKHAENLEKDL 212
           R+VD + T+E+  +E  R+    ++  +  K    +   EEAE   Q   +  +N     
Sbjct: 155 RQVD-QLTNEKAHVEVDRDNMGEDIERLREKLQDEMIQKEEAEHNLQSFRQDVDNASLAR 213

Query: 211 AKLGRQISYLSKEVIELRWLH 149
             L R++  L +E+I LR LH
Sbjct: 214 LDLERKVESLQEEIIFLRKLH 234

>YQFB_BACSU (P54467) Hypothetical protein yqfB|
          Length = 139

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/48 (31%), Positives = 30/48 (62%)
 Frame = -1

Query: 280 AAEEAEVRCQESAKHAENLEKDLAKLGRQISYLSKEVIELRWLHMVMG 137
           A  EAE R +E+A++ + LE+DLA   ++  Y  ++++++    +V G
Sbjct: 67  ARREAEERRRETARNLKGLERDLAAAKQKTVYTKQKMLQVNKDTVVQG 114

>GNPI_MOUSE (O88958) Glucosamine-6-phosphate isomerase (EC 3.5.99.6)|
           (Glucosamine-6-phosphate deaminase) (GNPDA) (GlcN6P
           deaminase) (Oscillin)
          Length = 289

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
 Frame = -1

Query: 454 ALSVLSAIQYGCYTLETADAHHSRKVDARFTDE----ELKLETWRNERELILVNRKRDAA 287
           A ++  AI+ G   + T  A           DE    ELK++T +  + L+LV+ K    
Sbjct: 209 AFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGLMLVHNKLVDP 268

Query: 286 LFAAEEAEVRCQESAK 239
           L++ +E E++  +SAK
Sbjct: 269 LYSIKEKEIQKSQSAK 284

>Y1352_PSEPK (P59560) UPF0234 protein PP1352|
          Length = 161

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
 Frame = -1

Query: 511 KVKSLLDGEITELQRVCFLALSVLSAIQYGCYTLETADAHHSRKVDARFTDEELKLETWR 332
           +V++ +D  I EL R   L          G  T E  D   +  + A   +EE +LE   
Sbjct: 14  EVQNAVDNAIKELDRRYDLK---------GKGTFEFKDKEQTVMLTA---EEEFQLEAML 61

Query: 331 NERELILVNRKRDAALFAAEEAEVRCQES---AKHAENLEKDLAK 206
               L LV RK D      ++     +E    AK  E ++KDLAK
Sbjct: 62  EILRLALVKRKIDVKCLETKDPYASGKEKKQEAKFREGIDKDLAK 106

>KINL_LEICH (P46865) Kinesin-like protein K39 (Fragment)|
          Length = 955

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = -1

Query: 352 LKLETWRNERELILVNRKRDAALFAAEEAEVRCQESAKHAENLEKDLAKLGRQ 194
           LK E  R EREL+    K+DAAL  ++    +  E A   E LE  +A+L R+
Sbjct: 505 LKEEQARKERELLKEMAKKDAAL--SKVRRRKDAEIASEREKLESTVAQLERE 555

>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa|
            Golgi complex-associated protein) (GCP372)
          Length = 3259

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
 Frame = -1

Query: 415  TLETADAHHSRKVDARFTDEELKLETWRNERELILVNRKRDAAL----FAAEEAEVRCQE 248
            +L+ +  H + ++D      +  L+     +E  L+NR+RDA L    F+    E   + 
Sbjct: 2742 SLQNSRDHANEELDELKRKYDASLKELAQLKEQGLLNRERDALLSETAFSMNSTE---EN 2798

Query: 247  SAKHAENLEKDLAKLGRQISYLSKEV 170
            S  H E L + L     Q+ +LS ++
Sbjct: 2799 SLSHLEKLNQQLLSKDEQLLHLSSQL 2824

>CAP3C_STRPN (Q54800) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)|
           (UDP-glucose pyrophosphorylase) (UDPGP)
           (Alpha-D-glucosyl-1-phosphate uridylyltransferase)
           (Uridine diphosphoglucose pyrophosphorylase)
          Length = 306

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = -2

Query: 309 LIGRGTLHFLLQRKLRSGVRNLLSMPKTWRRTWQSWGD 196
           ++ R T+HF+++  LRSG+ ++L +    +R+ + + D
Sbjct: 32  IVDRPTIHFVIEEALRSGIEDILVVTGKSKRSIEDYFD 69

>RRBP1_HUMAN (Q9P2E9) Ribosome-binding protein 1 (Ribosome receptor protein) (180|
            kDa ribosome receptor homolog) (ES/130-related protein)
          Length = 1410

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 25/78 (32%), Positives = 37/78 (47%)
 Frame = -1

Query: 391  HSRKVDARFTDEELKLETWRNERELILVNRKRDAALFAAEEAEVRCQESAKHAENLEKDL 212
            H +  +AR  + +L  E  R+   L+   + RDA    A +AE         A+  +  L
Sbjct: 940  HGQLQEARAENSQLT-ERIRSIEALLEAGQARDAQDVQASQAE---------ADQQQTRL 989

Query: 211  AKLGRQISYLSKEVIELR 158
             +L  Q+S L KE IELR
Sbjct: 990  KELESQVSGLEKEAIELR 1007

>TPM_METEN (Q25456) Tropomyosin (Allergen Met e 1) (Met e I)|
          Length = 274

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
 Frame = -1

Query: 511 KVKSLLDGEITELQRVCFLALSVLSAIQYGCYTLETADAHHSRKVD-ARFTDEELKLETW 335
           K  S  +GE+  L R   L    L   +    T  T  A  S+  D +    + L+  + 
Sbjct: 66  KALSNAEGEVAALNRRIQLLEEDLERSEERLNTATTKLAEASQAADESERMRKVLENRSL 125

Query: 334 RNERELILVNRKRDAALFAAEEAEVRCQESAKHAENLEKDLAKLGRQISYLSKEVIELRW 155
            +E  +  +  +   A F AEEA+ +  E A+    +E DL +   +      +++EL  
Sbjct: 126 SDEERMDALENQLKEARFLAEEADRKYDEVARKLAMVEADLERAEERAETGESKIVELEE 185

Query: 154 LHMVMGES 131
              V+G +
Sbjct: 186 ELRVVGNN 193

>RAD50_PYRKO (Q5JHN1) DNA double-strand break repair rad50 ATPase|
          Length = 883

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -1

Query: 352 LKLETWRNE-RELILVNRKRDAALFAAEEAEVRCQESAKHAENLEKDLAKLGRQISYLSK 176
           L L+ + N  + L+ V ++ DA + A E+     +   +   NLEK+L  + R+I+ +S 
Sbjct: 155 LGLDRYENSYKNLLDVRKEIDARIKAIEDYLKSTENIDELIGNLEKELTSVLREINEISP 214

Query: 175 EVIELR 158
           ++ ELR
Sbjct: 215 KLPELR 220

>SYV_THEMA (Q9X2D7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 865

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
 Frame = -1

Query: 361 DEELKLETWRNERELILVNRK--RDAALFAAEEAEVRCQ-----ESAKHAENLEKDLAKL 203
           +EEL L+T  N  E+  VN K  + A  +  EE E         +  K  E L++ + K+
Sbjct: 756 EEELLLKTLGNIEEVSFVNEKPPKTATAYVEEEIEAYVDLGGLIDFEKEKERLKQIMEKI 815

Query: 202 GRQISYLSKEV 170
            ++I  L K++
Sbjct: 816 QKEIDRLEKKL 826

>LIPA2_MOUSE (Q8BSS9) Liprin-alpha-2 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein alpha-2)
           (PTPRF-interacting protein alpha-2)
          Length = 1257

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
 Frame = -1

Query: 370 RFTDEELKLETWRNERELILVNRKRDAALFAAEEAEVRCQESAKHAENLEK---DLAKLG 200
           R +D   +L T  NER L L  ++R AAL   EE  V  QES    +NLE+   D   L 
Sbjct: 464 RLSDTVDRLLTESNER-LQLHLKERMAAL---EEKNVLIQESENFRKNLEESLHDKVSLA 519

Query: 199 RQISYLSKEVIELR 158
            +I  L  E+ +++
Sbjct: 520 EEIEKLRSELDQMK 533

>LIPA2_HUMAN (O75334) Liprin-alpha-2 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein alpha-2)
           (PTPRF-interacting protein alpha-2)
          Length = 1257

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
 Frame = -1

Query: 370 RFTDEELKLETWRNERELILVNRKRDAALFAAEEAEVRCQESAKHAENLEK---DLAKLG 200
           R +D   +L T  NER L L  ++R AAL   EE  V  QES    +NLE+   D   L 
Sbjct: 464 RLSDTVDRLLTESNER-LQLHLKERMAAL---EEKNVLIQESETFRKNLEESLHDKESLA 519

Query: 199 RQISYLSKEVIELR 158
            +I  L  E+ +L+
Sbjct: 520 EEIEKLRSELDQLK 533

>MYH3_RAT (P12847) Myosin heavy chain, fast skeletal muscle, embryonic|
          Length = 1940

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 5/122 (4%)
 Frame = -1

Query: 511  KVKSLLDGEITELQRVCFLALSVLSAIQYGCYTLETADAHHSRKVDARFTDEELKLETWR 332
            K K  L GE+ +L      A S+ +A+               R  D    + + K E  +
Sbjct: 1417 KTKQRLQGEVEDLMVDVERANSLAAALD-----------KKQRNFDKVLAEWKTKCEESQ 1465

Query: 331  NERELILV-NRKRDAALF----AAEEAEVRCQESAKHAENLEKDLAKLGRQISYLSKEVI 167
             E E  L  +R     LF    A EEA  + +   +  +NLE+++A L  QI+   K + 
Sbjct: 1466 AELEAALKESRSLSTELFKLKNAYEEALDQLETVKRENKNLEQEIADLTEQIAENGKSIH 1525

Query: 166  EL 161
            EL
Sbjct: 1526 EL 1527

>SYS_PYRKO (Q5JE75) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 455

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = -1

Query: 382 KVDARFTDEELKLETWRNERELILVN-RKRDAALFAAEEAEVRCQESAKHAENLEKDLAK 206
           ++D ++ +   K+   R ER  + V   KR  A    ++   R  E  K  E LEK+  +
Sbjct: 35  ELDKKWRENLKKINQLRKERNQLAVQIGKRKKAGEPIDDLLKRSNEIVKQIEELEKENEE 94

Query: 205 LGRQISYLSKEVIELRWLHMVMGESKD 125
           L ++I Y    +  +    + +GES +
Sbjct: 95  LKKKIDYYLWRLPNITHESVPVGESDE 121

>SMA6_CAEEL (Q09488) Serine/threonine-protein kinase sma-6 precursor (EC|
           2.7.11.30)
          Length = 636

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
 Frame = -1

Query: 490 GEITELQRVCFLALSVLSAIQYGCYTLETADAHHSRKVDAR--FTDEELKLETWRNEREL 317
           G+   +QR     L+++  I  G Y       +    V  +  +T +E   ++W+NER++
Sbjct: 252 GQAALIQRTVRQDLTIIKTIGQGRYGEVRKALYRGSYVAVKTFYTTDE---DSWKNERDV 308

Query: 316 ILVNRKRDAALFAAEEAEVRCQESAKHAENLEKDLAKLGRQISYLSKE 173
              N      +     A++  +E +     L  D  +LG    YL +E
Sbjct: 309 YQTNMINHENILQFVAADIWSEEDSMTKMLLITDYHELGSLSDYLCRE 356


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,329,970
Number of Sequences: 219361
Number of extensions: 1517428
Number of successful extensions: 4531
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4527
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)