>KCNK9_MOUSE (Q3LS21) Potassium channel subfamily K member 9 (Acid-sensitive|
           potassium channel protein TASK-3) (TWIK-related
           acid-sensitive K(+) channel 3)
          Length = 402

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 338 WGDHEDDIDGGDMAPNGRLTAPPALPAP 421
           WG  +DD D  D+  N  +TAP + PAP
Sbjct: 305 WGKDDDDDDDDDVVDNVVVTAPISAPAP 332

>CB024_RAT (Q6P7B2) Protein C2orf24 homolog|
          Length = 408

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = +2

Query: 299 LTRMSCCVEKS----SMWGDHEDDIDGGDMAPNGRLTAPPALPAPCNSCAYRRRSGYGTT 466
           LT +S C+E S    S+WG   D +    M P      PPA P P + C + ++      
Sbjct: 290 LTNVSSCLEDSVELPSLWGSLLDPLTPPLMPPPD----PPAPPTPFHKCPFCQKFQRNPP 345

Query: 467 ACCWC 481
            C  C
Sbjct: 346 NCRAC 350

>YNIF_AZOBR (P25316) Hypothetical 12.3 kDa protein in nifK-nifY intergenic|
           region
          Length = 118

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 455 YGTTACCWCSGGRIA 499
           Y +TACCW +GGR A
Sbjct: 10  YASTACCWLAGGRHA 24

>RSH1_MAIZE (Q41853) Homeobox protein rough sheath 1|
          Length = 351

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +2

Query: 275 IAAAGDAGLTRMSCCVEKSSMWGDHEDDIDGGDMAPNGRLTAPPAL 412
           I+  G +   R+S    KS   G  EDD+D     PNGR   PP +
Sbjct: 184 ISGGGGSSSARLSLADGKSEGVGSSEDDMD-----PNGRENDPPEI 224

>MBD1_MOUSE (Q9Z2E2) Methyl-CpG-binding domain protein 1 (Methyl-CpG-binding|
           protein MBD1)
          Length = 636

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +2

Query: 296 GLTRMSCCVEKSSMWGDHEDDIDGGDMAPNGRLTAPPALPAPCN 427
           GL R   C+++   WG  +    G  +A      APP  P P +
Sbjct: 268 GLKRQWRCLQRRCFWGKRDSSKRGSKVASQRHSQAPPLPPHPAS 311


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,956,491
Number of Sequences: 219361
Number of extensions: 1048817
Number of successful extensions: 2922
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2922
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)