ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart33c06 |
|---|---|
| Clone Library Name | barley_pub |
>TYR3_CAEEL (Q19673) Putative tyrosinase-like protein tyr-3 precursor| Length = 683 Score = 43.1 bits (100), Expect = 4e-04 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Frame = -3 Query: 473 TDPDSLHGSCPVIEGQKWSATKW-IHVRSFENSGKQGASGDGCEDENVLCSQWAAVGECA 297 T P ++ + PV+ + +S T I ++ F+ S C +EN C W+A GEC Sbjct: 429 TPPPTIQPTKPVVTVEVFSETCLKIRLKFFQTS---------CFNENECCGPWSAKGECQ 479 Query: 296 KNPNYMVGTKEAPGFCRKSCNVC 228 KNP YM +C+ SC C Sbjct: 480 KNPVYM------NVWCKASCRQC 496 Score = 39.7 bits (91), Expect = 0.004 Identities = 19/42 (45%), Positives = 22/42 (52%) Frame = -3 Query: 350 CEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFCRKSCNVCV 225 C D + C+ WA GEC KN K P CR+SCN CV Sbjct: 624 CADYHYDCAAWARRGECLKN-------KWMPENCRRSCNTCV 658 Score = 39.3 bits (90), Expect = 0.006 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = -3 Query: 383 NSGKQGASGDG--CEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFCRKSCNVC 228 N+G+Q D C +E+ C WA G+C NP YM C+ SC VC Sbjct: 568 NNGQQNTPCDSPMCYNEDQCCPIWAQRGQCRSNPGYMTCQ------CKVSCGVC 615 Score = 37.4 bits (85), Expect = 0.021 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -3 Query: 350 CEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFCRKSCNVC 228 C D + C+ W+ GEC KNP +M CR SC C Sbjct: 506 CSDRHTNCAMWSRSGECNKNPLWMSEN------CRSSCQKC 540
>NAS10_CAEEL (Q21388) Zinc metalloproteinase nas-10 (EC 3.4.24.21) (Nematode| astacin 10) Length = 560 Score = 42.4 bits (98), Expect = 7e-04 Identities = 20/42 (47%), Positives = 24/42 (57%) Frame = -3 Query: 353 GCEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFCRKSCNVC 228 GC+D+NV C WA C NPN+ V + CRKSCN C Sbjct: 523 GCDDKNVYCGAWALQDLC-NNPNHNVWMRSN---CRKSCNFC 560
>NAS14_CAEEL (Q19269) Zinc metalloproteinase nas-14 precursor (EC 3.4.24.21)| (Nematode astacin 14) Length = 503 Score = 42.0 bits (97), Expect = 9e-04 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = -3 Query: 365 ASGDGCEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFCRKSCNVC 228 A + CED+N+ CS WA +GEC +M FC+ SC C Sbjct: 464 APKEKCEDKNLFCSYWAKIGECNSESKFM------KIFCKASCGKC 503 Score = 40.0 bits (92), Expect = 0.003 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -3 Query: 350 CEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFCRKSCNVC 228 CED N C W +G C + YM +CRK+CN+C Sbjct: 380 CEDLNAHCGMWEQLGHCQHSVKYMA------HYCRKACNLC 414
>P4HA1_CAEEL (Q10576) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC| 1.14.11.2) (4-PH alpha-1) (Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-1 subunit) Length = 559 Score = 39.3 bits (90), Expect = 0.006 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = -3 Query: 470 DPDSLHGSCPVIEGQKWSATKWIHVRSFE 384 +PD+ H +CPV+ G KW + KWIH + E Sbjct: 488 NPDTRHAACPVLVGIKWVSNKWIHEKGNE 516
>P4HA1_CHICK (P16924) Prolyl 4-hydroxylase alpha-1 subunit (EC 1.14.11.2) (4-PH| alpha-1) (Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-1 subunit) Length = 516 Score = 38.1 bits (87), Expect = 0.013 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 485 PDATTDPDSLHGSCPVIEGQKWSATKWIHVRSFE 384 P D + H +CPV+ G KW + KW+H R E Sbjct: 472 PSGEGDYSTRHAACPVLVGNKWVSNKWLHERGQE 505
>TYR1_CAEEL (P34269) Putative tyrosinase-like protein tyr-1 precursor| Length = 601 Score = 37.4 bits (85), Expect = 0.021 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -3 Query: 350 CEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFCRKSCNVC 228 C +E+ C+QW+ EC N YM +CRKSC +C Sbjct: 480 CYNEDPCCNQWSRQNECRTNTVYM------NRYCRKSCGLC 514
>NAS11_CAEEL (Q21432) Zinc metalloproteinase nas-11 precursor (EC 3.4.24.21)| (Nematode astacin 11) Length = 579 Score = 37.0 bits (84), Expect = 0.028 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = -3 Query: 353 GCEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFCRKSCNVC 228 GC+D+NV C WA C KNP + + C+KSC +C Sbjct: 538 GCDDKNVYCGAWALKDLC-KNPGH---DQYMAANCKKSCGLC 575
>P4HA1_RAT (P54001) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC| 1.14.11.2) (4-PH alpha-1) (Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-1 subunit) Length = 534 Score = 36.6 bits (83), Expect = 0.036 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 470 DPDSLHGSCPVIEGQKWSATKWIHVRSFE 384 D + H +CPV+ G KW + KW+H R E Sbjct: 495 DYSTRHAACPVLVGNKWVSNKWLHERGQE 523
>P4HA1_PONPY (Q5RAG8) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC| 1.14.11.2) (4-PH alpha-1) (Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-1 subunit) Length = 534 Score = 36.6 bits (83), Expect = 0.036 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 470 DPDSLHGSCPVIEGQKWSATKWIHVRSFE 384 D + H +CPV+ G KW + KW+H R E Sbjct: 495 DYSTRHAACPVLVGNKWVSNKWLHERGQE 523
>P4HA1_MOUSE (Q60715) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC| 1.14.11.2) (4-PH alpha-1) (Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-1 subunit) Length = 534 Score = 36.6 bits (83), Expect = 0.036 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 470 DPDSLHGSCPVIEGQKWSATKWIHVRSFE 384 D + H +CPV+ G KW + KW+H R E Sbjct: 495 DYSTRHAACPVLVGNKWVSNKWLHERGQE 523
>P4HA1_HUMAN (P13674) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC| 1.14.11.2) (4-PH alpha-1) (Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-1 subunit) Length = 534 Score = 36.6 bits (83), Expect = 0.036 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 470 DPDSLHGSCPVIEGQKWSATKWIHVRSFE 384 D + H +CPV+ G KW + KW+H R E Sbjct: 495 DYSTRHAACPVLVGNKWVSNKWLHERGQE 523
>P4HA2_CAEEL (Q20065) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC| 1.14.11.2) (4-PH alpha-2) (Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-2 subunit) Length = 539 Score = 35.4 bits (80), Expect = 0.081 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 482 DATTDPDSLHGSCPVIEGQKWSATKWIHVRSFE 384 D D + H +CPV+ G KW + KWIH + E Sbjct: 481 DGEGDLRTRHAACPVLLGVKWVSNKWIHEKGQE 513
>TM55B_MACFA (Q4R6W2) Transmembrane protein 55B (EC 3.1.3.-) (Type I| phosphatidylinositol 4,5-bisphosphate 4-phosphatase) (PtdIns-4,5-P2 4-Ptase I) Length = 284 Score = 27.7 bits (60), Expect(2) = 0.11 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 393 PHMDPFRGGPLLAFDDGAAPVQTVRVCRCI 482 P DP PL + D G+AP+ T RVC+ + Sbjct: 68 PGEDPPPYSPLTSPDSGSAPMITCRVCQSL 97 Score = 26.2 bits (56), Expect(2) = 0.11 Identities = 11/24 (45%), Positives = 11/24 (45%) Frame = +2 Query: 266 PSCPPYSWGSWRTPQRQPTASRGH 337 PS PPY G PQ P GH Sbjct: 40 PSAPPYGAGKHAPPQAFPPFPEGH 63
>TM55B_RAT (Q5PPM8) Transmembrane protein 55B (EC 3.1.3.-) (Type I| phosphatidylinositol 4,5-bisphosphate 4-phosphatase) (PtdIns-4,5-P2 4-Ptase I) Length = 284 Score = 27.3 bits (59), Expect(2) = 0.14 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 393 PHMDPFRGGPLLAFDDGAAPVQTVRVCR 476 P DP PL + D G+AP+ T RVC+ Sbjct: 68 PGEDPPPYSPLTSPDSGSAPMITCRVCQ 95 Score = 26.2 bits (56), Expect(2) = 0.14 Identities = 11/24 (45%), Positives = 11/24 (45%) Frame = +2 Query: 266 PSCPPYSWGSWRTPQRQPTASRGH 337 PS PPY G PQ P GH Sbjct: 40 PSAPPYGAGKHAPPQAFPPFPEGH 63
>TM55B_MOUSE (Q3TWL2) Transmembrane protein 55B (EC 3.1.3.-) (Type I| phosphatidylinositol 4,5-bisphosphate 4-phosphatase) (PtdIns-4,5-P2 4-Ptase I) Length = 284 Score = 27.3 bits (59), Expect(2) = 0.14 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 393 PHMDPFRGGPLLAFDDGAAPVQTVRVCR 476 P DP PL + D G+AP+ T RVC+ Sbjct: 68 PGEDPPPYSPLTSPDSGSAPMITCRVCQ 95 Score = 26.2 bits (56), Expect(2) = 0.14 Identities = 11/24 (45%), Positives = 11/24 (45%) Frame = +2 Query: 266 PSCPPYSWGSWRTPQRQPTASRGH 337 PS PPY G PQ P GH Sbjct: 40 PSAPPYGAGKHAPPQAFPPFPEGH 63
>YOW6_CAEEL (P30652) Hypothetical protein ZK643.6 precursor| Length = 180 Score = 34.3 bits (77), Expect = 0.18 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -3 Query: 350 CEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFCRKSCNVC 228 CED N +C W G C+K + V C KSCN+C Sbjct: 144 CEDANKMCPIWVPRGFCSKFDHDKVQKS-----CAKSCNIC 179
>P4HA2_HUMAN (O15460) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC| 1.14.11.2) (4-PH alpha-2) (Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-2 subunit) Length = 535 Score = 33.9 bits (76), Expect = 0.24 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -3 Query: 455 HGSCPVIEGQKWSATKWIHVRSFE 384 H +CPV+ G KW + KW H R E Sbjct: 501 HAACPVLVGCKWVSNKWFHERGQE 524
>P4HA2_CHICK (Q5ZLK5) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC| 1.14.11.2) (4-PH alpha-2) (Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-2 subunit) Length = 534 Score = 33.9 bits (76), Expect = 0.24 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -3 Query: 455 HGSCPVIEGQKWSATKWIHVRSFE 384 H +CPV+ G KW + KW H R E Sbjct: 500 HAACPVLVGCKWVSNKWFHERGNE 523
>EGLX_MOUSE (Q8BG58) Putative HIF-prolyl hydroxylase PH-4 (EC 1.14.11.-)| (Hypoxia-inducible factor prolyl 4-hydroxylase) Length = 503 Score = 33.9 bits (76), Expect = 0.24 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = -3 Query: 470 DPDSLHGSCPVIEGQKWSATKWIHV 396 D SLHG C V G KW A WI+V Sbjct: 437 DDYSLHGGCLVTRGTKWIANNWINV 461
>P4HA2_MOUSE (Q60716) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC| 1.14.11.2) (4-PH alpha-2) (Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-2 subunit) Length = 537 Score = 33.9 bits (76), Expect = 0.24 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -3 Query: 455 HGSCPVIEGQKWSATKWIHVRSFE 384 H +CPV+ G KW + KW H R E Sbjct: 503 HAACPVLVGCKWVSNKWFHERGQE 526
>EGLX_HUMAN (Q9NXG6) Putative HIF-prolyl hydroxylase PH-4 (EC 1.14.11.-)| (Hypoxia-inducible factor prolyl 4-hydroxylase) Length = 502 Score = 33.9 bits (76), Expect = 0.24 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = -3 Query: 470 DPDSLHGSCPVIEGQKWSATKWIHV 396 D SLHG C V G KW A WI+V Sbjct: 436 DDYSLHGGCLVTRGTKWIANNWINV 460
>DTD_PARUW (Q6MEB9) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 151 Score = 33.1 bits (74), Expect = 0.40 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Frame = -3 Query: 422 WSATKWIHVRSF-ENSGKQGASGDGCEDENVLCSQWAAVGEC--AKNPNYM 279 WS K +H+R F + +GK + CE E ++ SQ+ G C + P+++ Sbjct: 44 WSVDKLVHLRIFNDENGKMNRNVKECEGEILVVSQFTLYGNCLNGRRPDFI 94
>P4H_MIMIV (Q5UP57) Putative prolyl 4-hydroxylase (EC 1.14.11.2) (4-PH)| (Procollagen-proline,2-oxoglutarate-4-dioxygenase) Length = 242 Score = 32.7 bits (73), Expect = 0.53 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 Query: 467 PDSLHGSCPVIEGQKWSATKWIHVRSF 387 P SLH PV G+KW A W R F Sbjct: 215 PYSLHAGMPVTSGEKWIANLWFRERKF 241
>NAS9_CAEEL (P91137) Zinc metalloproteinase nas-9 precursor (EC 3.4.24.21)| (Nematode astacin 9) Length = 546 Score = 32.7 bits (73), Expect = 0.53 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = -3 Query: 353 GCEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFCRKSCNVC 228 GC+D+NV C WA G C K M E C+ SC+ C Sbjct: 509 GCDDQNVHCGTWALHGYC-KMKEQMKWMNEN---CKASCDKC 546
>NAS13_CAEEL (Q20191) Zinc metalloproteinase nas-13 precursor (EC 3.4.24.21)| (Nematode astacin 13) Length = 527 Score = 31.2 bits (69), Expect = 1.5 Identities = 16/41 (39%), Positives = 17/41 (41%) Frame = -3 Query: 350 CEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFCRKSCNVC 228 CED C +WA G C N V C KSCN C Sbjct: 491 CEDARTWCERWANSGMC----NQTVFKDYMRQKCAKSCNFC 527
>GIDA_SHEON (Q8E8A9) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 30.4 bits (67), Expect = 2.6 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 10/61 (16%) Frame = +2 Query: 80 TGLPLNPTYKVMD----------NVAKSKSIQQTAHLHPEMGGLISLLLRHLKKKQLTAR 229 TGLPLN YK + N K ++I Q + + IS+LL HLKK+ L + Sbjct: 568 TGLPLNLDYKEVPGLSNEVIAKLNSHKPETIGQASRISGITPAAISILLVHLKKRGLLRK 627 Query: 230 T 232 + Sbjct: 628 S 628
>DTD_DESPS (Q6AS26) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 149 Score = 30.4 bits (67), Expect = 2.6 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Frame = -3 Query: 425 KWSATKWIHVRSFE-NSGKQGASGDGCEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFC 249 KW A K H+R FE + GK S + ++ SQ+ G+C K P F Sbjct: 43 KWMAEKIRHLRIFEDDEGKMNHSLQDRGGKMLIVSQFTLYGDCRKGRRPSYSQAANPEFA 102 Query: 248 RKSCNVCVQ*VVFS*GAAVIS*LIHPSQDV 159 ++ ++ ++ V S G V + + DV Sbjct: 103 KRIYDLFIEEVKKS-GLEVATGIFQADMDV 131
>DYC1_CAEEL (Q8STF6) Dystrophin-like protein 1 (Dyb-1-binding and CAPON-related| protein) Length = 887 Score = 30.0 bits (66), Expect = 3.4 Identities = 20/80 (25%), Positives = 32/80 (40%) Frame = +1 Query: 226 THTLQLFLQKPGASFVPTI*LGFLAHSPTAAHCEQRTFSSSHPSPEAPCLPEFSKDLTWI 405 T TL + PG S +P + + P + T + HP AP +P + + + Sbjct: 318 TQTLPSLSENPGQSHIPRM----MTMPPNMPY---PTATLPHPRTWAPQIPSYPNSMQSL 370 Query: 406 HFVADHFWPSMTGQLPCKLS 465 ++P M G LP S Sbjct: 371 EQNVPMYYPQMPGMLPSSSS 390
>PTTG_MOUSE (Q8R143) Pituitary tumor-transforming gene 1 protein-interacting| protein precursor (Pituitary tumor-transforming gene protein-binding factor) (PTTG-binding factor) (PBF) Length = 174 Score = 29.6 bits (65), Expect = 4.4 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 13/80 (16%) Frame = -2 Query: 297 QEPQLYGGHEGSTWLLQEELQRVRAVSCFFLRCRSNKL--------INPPISGCK----- 157 QEP G E + +E L R VSC + C NK I PP S CK Sbjct: 30 QEPPRVGCSEYTNRSCEECL---RNVSCLW--CNENKACMDYPVRKILPPASLCKLSSAR 84 Query: 156 WAVCWMLLDLATLSITLYVG 97 W VCW+ + +++++ G Sbjct: 85 WGVCWVNFEALIITMSVLGG 104
>NU133_HUMAN (Q8WUM0) Nuclear pore complex protein Nup133 (Nucleoporin Nup133)| (133 kDa nucleoporin) Length = 1156 Score = 29.6 bits (65), Expect = 4.4 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Frame = -1 Query: 448 AAPSSKARSGPPRNGSM*GPSKTQASRELPVTGARMRMSSARSGLPLGSAPRTPTIW--W 275 AAPS + P GS GP P T ++R GLPLGSA +P ++ Sbjct: 4 AAPSPRT----PGTGSRRGPLAGLGPGSTPRT-------ASRKGLPLGSAVSSPVLFSPV 52 Query: 274 ARRKHLASAG 245 RR L+S G Sbjct: 53 GRRSSLSSRG 62
>CYAA_USTMA (P49606) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)| (Adenylyl cyclase) Length = 2493 Score = 29.3 bits (64), Expect = 5.8 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = -1 Query: 484 LMQRQTLTVCTGAAPSSKARSGPPRNGSM*GPSKTQASRELPVTGARM--RMSSARSGLP 311 + +RQT T +PS + + +GS+ PS+T AS + R+ S + LP Sbjct: 507 IAERQTSVTSTVESPSHASEASLAPSGSLRTPSRTTASTSTSSASTVLSDRLPSQVNMLP 566 Query: 310 LGSAPR 293 S PR Sbjct: 567 RNSVPR 572
>ODB2_BACSU (P37942) Lipoamide acyltransferase component of branched-chain| alpha-keto acid dehydrogenase complex (EC 2.3.1.168) (Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase) (E2) (Dihydrolipoamide branched chain transacylase) Length = 424 Score = 29.3 bits (64), Expect = 5.8 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = -1 Query: 481 MQRQTLTVCTGAAPSSKARSGPPRNGSM*GPSKTQASRELPVTGARMRMSS 329 +Q Q AAP+ K+ S P P+ +E+PVTG R ++S Sbjct: 158 VQEQNPEELKTAAPAPKSASKPEPKEETSYPASAAGDKEIPVTGVRKAIAS 208
>TSA4_GIALA (P21849) Major surface-labeled trophozoite antigen 417 precursor| Length = 713 Score = 28.9 bits (63), Expect = 7.6 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 4/60 (6%) Frame = -3 Query: 395 RSFENSGKQGASGDGCEDENVLCSQWAAVGECAKNPNYMVGTKEAPGFCRK----SCNVC 228 ++ N GK+ C+ L + CAK NY T+ A C++ +C C Sbjct: 343 KACSNEGKENEVCTDCDGSTYLTPTSQCIDSCAKIGNYYGATEGAKKLCKECTAANCKTC 402
>PTTG_RAT (Q6P767) Pituitary tumor-transforming gene 1 protein-interacting| protein precursor (Pituitary tumor-transforming gene protein-binding factor) (PTTG-binding factor) (PBF) Length = 174 Score = 28.9 bits (63), Expect = 7.6 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 13/80 (16%) Frame = -2 Query: 297 QEPQLYGGHEGSTWLLQEELQRVRAVSCFFLRCRSNKL--------INPPISGCK----- 157 QEP G E + +E L R VSC + C NK I PP S CK Sbjct: 30 QEPPGVGCSEYTNRSCEECL---RNVSCLW--CNENKACLDYPVRKILPPASLCKLSSAR 84 Query: 156 WAVCWMLLDLATLSITLYVG 97 W VCW+ + +++++ G Sbjct: 85 WGVCWVNFEALIITMSVLGG 104
>PTN12_MOUSE (P35831) Tyrosine-protein phosphatase non-receptor type 12 (EC| 3.1.3.48) (Protein-tyrosine phosphatase P19) (P19-PTP) (MPTP-PEST) Length = 775 Score = 28.9 bits (63), Expect = 7.6 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +1 Query: 298 AHSPTAAHCEQRTFSSSHPSPEAPCLPEFSK-DLTW 402 AHS AA + + S+SH P CLP K +TW Sbjct: 501 AHSHRAAESSEESQSNSHTPPRPDCLPLDKKGHVTW 536
>COMD5_RAT (Q9ERR2) COMM domain-containing protein 5 (Hypertension-related| calcium-regulated gene protein) (HCaRG) Length = 224 Score = 28.5 bits (62), Expect = 9.9 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +1 Query: 301 HSPTAAHCEQRTFSSSHPSPEAPCLPEFSKDL 396 H P +H + +F S PSPE + + KDL Sbjct: 12 HHPADSHSGRVSFLGSQPSPEVTAVAQLLKDL 43
>GP156_HUMAN (Q8NFN8) Probable G-protein coupled receptor 156 (GABAB-related| G-protein coupled receptor) (G-protein coupled receptor PGR28) Length = 814 Score = 28.5 bits (62), Expect = 9.9 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = +1 Query: 298 AHSPTAAHCEQRTFSSSHPSPEAPCLPEFSKDL 396 A AA Q + S PSP APCL + S DL Sbjct: 688 ARGSKAAFLRQPSGSGRAPSPAAPCLSKASPDL 720 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,597,189 Number of Sequences: 219361 Number of extensions: 1901088 Number of successful extensions: 5725 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 5429 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5717 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
