>SYS1_MOUSE (Q78S06) Protein SYS1 homolog|
          Length = 156

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -3

Query: 551 HIIHLFICIIYGG-WPASGTWWVVNIVGLAIMSLLGEYLCIRRELKDIPV 405
           H  HL  C +Y   +P++ TWW+V  V +A+M+++GEYLC+R ELK+IP+
Sbjct: 99  HFFHLLGCWLYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRTELKEIPL 148

>SYS1_HUMAN (Q8N2H4) Protein SYS1 homolog|
          Length = 156

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
 Frame = -3

Query: 551 HIIHLFICIIYGG-WPASGTWWVVNIVGLAIMSLLGEYLCIRRELKDIPV 405
           H  HL  C  Y   +P++ TWW+V  V +A+M+++GEYLC+R ELK+IP+
Sbjct: 99  HFFHLLGCWFYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRTELKEIPL 148

>VE1_HPV21 (P50759) Replication protein E1|
          Length = 603

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 8/65 (12%)
 Frame = -3

Query: 287 FFVLWFTTYTVESCKYLCCCNAWPLSRTTIGNDVASEASELPPLEWD--------GSSFF 132
           FF + F   T +   Y  CCNAW LS   + +D+   + +L     D          S F
Sbjct: 171 FFGVGFNDLTRQFKSYKTCCNAWVLSVYAVHDDLLESSKQLLQQHCDYIWIRGIGAMSLF 230

Query: 131 VACIK 117
           + C K
Sbjct: 231 LLCFK 235

>VE1_HPV25 (Q02049) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 604

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 8/65 (12%)
 Frame = -3

Query: 284 FVLWFTTYTVESCKYLCCCNAWPLSRTTIGNDVASEASELPPLEWD--------GSSFFV 129
           F + F   T +   Y  CCNAW +S   + +D+   + +L     D          S F+
Sbjct: 173 FGVGFNDLTRQFKSYKTCCNAWVISVYAVHDDLIESSKQLLQQHCDYVWIRGIGAMSLFL 232

Query: 128 ACIKS 114
            C K+
Sbjct: 233 VCFKA 237

>PSAB_EUGGR (P19431) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 734

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +3

Query: 153 FQWW*FRSLTRNVITYGGSTERPCITTAKIFAGFNSIGCKPQNKESQVSVFLRAD--INK 326
           +QWW    L  NV  Y GS     I T  +FAG+  +  K   K   VS F  A+  +N 
Sbjct: 121 YQWWYTIGLRTNVDLYNGSMFLLFIATLALFAGWLHLEPKYSPK---VSWFKDAESRLNH 177

Query: 327 HL 332
           HL
Sbjct: 178 HL 179


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,049,031
Number of Sequences: 219361
Number of extensions: 1662729
Number of successful extensions: 3607
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3607
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)