>SYCP2_RAT (O70608) Synaptonemal complex protein 2 (SCP-2) (Synaptonemal complex|
            lateral element protein) (rnSCP2)
          Length = 1505

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
 Frame = +2

Query: 8    PGKASPFTLRHANNNIGVVLHSNTTFQIQNSSSIH---------*SCRSLLQDPAE*ITC 160
            P    PF+ RH   N  V+   NT   I N  + H          S   L  +P    +C
Sbjct: 1163 PASGLPFSPRHTTKNNSVMNIKNTNSVINNQRTQHCNSYSDVSSNSSEKLYMEPESPDSC 1222

Query: 161  LLQQHKKKKTNENYRA 208
              + H + K  EN+ A
Sbjct: 1223 --ENHVQSKREENHAA 1236

>ODO1_ECOLI (P0AFG3) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 933

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
 Frame = -2

Query: 293 DKVEKQQRSCDDDILTM-------LD*GSCFVTP*RPYNFHSFSSS 177
           DK+E+++ +  +D   M       LD G C V   RP N HSF+ S
Sbjct: 489 DKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWS 534

>ODO1_ECOL6 (P0AFG4) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 933

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
 Frame = -2

Query: 293 DKVEKQQRSCDDDILTM-------LD*GSCFVTP*RPYNFHSFSSS 177
           DK+E+++ +  +D   M       LD G C V   RP N HSF+ S
Sbjct: 489 DKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWS 534

>ODO1_ECO57 (P0AFG5) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 933

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
 Frame = -2

Query: 293 DKVEKQQRSCDDDILTM-------LD*GSCFVTP*RPYNFHSFSSS 177
           DK+E+++ +  +D   M       LD G C V   RP N HSF+ S
Sbjct: 489 DKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWS 534

>YR45_CAEEL (Q09562) Hypothetical protein F47D12.5|
          Length = 633

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 21  HHSLFVTQTTTLE*YYIQTLHFKSKTHHRYTSLADPCYKILQNKLHAY 164
           HH +F+  T TL      T   KS TH+          ++L+N LH +
Sbjct: 219 HHEVFLLNTATL------TSSLKSLTHYLGVHRISSVERVLENMLHLF 260

>UNC5C_CHICK (Q7T2Z5) Netrin receptor UNC5C precursor (Unc-5 homolog C) (Unc-5|
           homolog 3) (cUNC-5H3)
          Length = 931

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 72  QTLHFKSKTHHRYTSLADPCYKILQNKLHA 161
           +TLHFK  TH+   S+ D  + + ++KL A
Sbjct: 730 KTLHFKGSTHNLRLSIHDIAHSLWKSKLPA 759


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,576,638
Number of Sequences: 219361
Number of extensions: 662297
Number of successful extensions: 1519
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)