ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart33b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463571.1| Oryza sativa (japonica cultivar-group), predic... 230 4e-57
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
3gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa004... 98 3e-17
4dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
5dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
6gb|DQ269452.2| Stevia rebaudiana 4-diphosphocytidyl-2-C-methyl-D... 48 0.029
7ref|NM_126305.2| Arabidopsis thaliana ATMEPCT/ISPD (2-C-METHYL-D... 46 0.11
8gb|BT006120.1| Arabidopsis thaliana clone U50856 putative sugar ... 46 0.11
9gb|AF230737.1|AF230737 Arabidopsis thaliana 4-Diphosphocytidyl-2... 46 0.11
10dbj|AK118110.1| Arabidopsis thaliana At2g02500 mRNA for putative... 46 0.11
11dbj|AB037876.1| Arabidopsis thaliana ATMEPCT mRNA for 2-C-methyl... 46 0.11
12gb|AC139131.19| Mus musculus chromosome 7, clone RP23-301N20, co... 44 0.45
13gb|AC114404.12| Mus musculus chromosome 7, clone RP24-350D24, co... 44 0.45
14emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 ... 42 1.8
15gb|AC099008.1| Drosophila melanogaster, chromosome 2R, region 50... 42 1.8
16gb|AC007851.6|AC007851 Drosophila melanogaster, chromosome 2R, r... 42 1.8
17gb|AE003816.4| Drosophila melanogaster chromosome 2R, section 34... 42 1.8
18gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome... 40 7.1
19gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 7.1
20emb|AL356967.23| Human DNA sequence from clone RP11-427E4 on chr... 40 7.1
21emb|BX545915.7| Zebrafish DNA sequence from clone DKEY-41B16 in ... 40 7.1
22emb|BX537453.3|RN86L3 Rattus norvegicus chromosome 1 BAC RP32-86... 40 7.1
23emb|CR628312.1| Human DNA sequence from clone XX-NCIH2171_8J01, ... 40 7.1
24gb|AC004136.3| Arabidopsis thaliana chromosome 2 BAC T8K22 genom... 40 7.1
25gb|AC116428.1| Homo sapiens chromosome 5 clone CTD-2587M2, compl... 40 7.1
26gb|AC099669.2| Homo sapiens chromosome 3 clone RP11-944L7, compl... 40 7.1
27gb|AC010197.7| Homo sapiens 12p12p11-37.2-54.4 BAC RP11-92H16 (R... 40 7.1
28emb|BX005394.8| Zebrafish DNA sequence from clone DKEY-3N15 in l... 40 7.1
29gb|AC112699.3| Homo sapiens BAC clone RP11-725F20 from 2, comple... 40 7.1
30gb|AC073641.3| Homo sapiens BAC clone RP11-368E14 from 2, comple... 40 7.1
31gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chro... 40 7.1
32gb|DQ072004.1| Streptococcus pneumoniae isolate 14763 penicillin... 40 7.1
33gb|AY609879.1| Sus scrofa clone Clu_3761.scr.msk.p1.Contig8, mRN... 40 7.1
34dbj|AP006136.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 7.1
35gb|AC138293.11| Mus musculus chromosome 18, clone RP23-33P24, co... 40 7.1
36emb|AL773564.8| Zebrafish DNA sequence from clone CH211-204C7, c... 40 7.1
37dbj|AB021490.2| Oryzias latipes gene for membrane guanylyl cycla... 40 7.1 
>ref|XM_463571.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 612

 Score =  230 bits (116), Expect = 4e-57
 Identities = 194/220 (88%)
 Strand = Plus / Minus

                                                                       
Query: 303 ggagtttgcatttcccaaagagttttcctatcaagggtttttacgacgaaagaatcgctg 362
           ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 596 ggagtttgcatttcccaaagagttttcctatcaagtgtttttacgacaaaagaattgctg 537

                                                                       
Query: 363 ttggcctcctttatagtagctttgacgggcacaccgagaacagctgctccatgcaccgca 422
           |  |||||||| ||||||||||| || |||||||| |||||||| ||||| |||||   |
Sbjct: 536 tcagcctccttgatagtagctttcacaggcacaccaagaacagcagctccgtgcactata 477

                                                                       
Query: 423 gcatcttctaagacctttttcacatcttcagaggataccaagggtcttgcagaatcatgg 482
           ||||||||||| |||||||| ||||||||||| || || ||||| |||||||||||||| 
Sbjct: 476 gcatcttctaatacctttttgacatcttcagatgacactaagggccttgcagaatcatgt 417

                                                   
Query: 483 acacaaacaagttctgaatctccattaatttcctgaagtc 522
           |||||||||||||| || ||||||| ||| ||||| ||||
Sbjct: 416 acacaaacaagttcagagtctccatcaatctcctgtagtc 377
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 58/61 (95%)
 Strand = Plus / Minus

                                                                            
Query: 303      ggagtttgcatttcccaaagagttttcctatcaagggtttttacgacgaaagaatcgctg 362
                ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 38538430 ggagtttgcatttcccaaagagttttcctatcaagtgtttttacgacaaaagaattgctg 38538371

                 
Query: 363      t 363
                |
Sbjct: 38538370 t 38538370



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                            
Query: 435      acctttttcacatcttcagaggataccaagggtcttgcagaatcatggacacaaacaagt 494
                |||||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 38537761 acctttttgacatcttcagatgacactaagggccttgcagaatcatgtacacaaacaagt 38537702

                                       
Query: 495      tctgaatctccattaatttcctg 517
                || || ||||||| ||| |||||
Sbjct: 38537701 tcagagtctccatcaatctcctg 38537679



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                            
Query: 184      tatcggccctatttatcattcatcaaacgctcagctaggagcatgtcatcaggagtagtc 243
                |||||||  ||||| ||||||||||  |||||||| ||||||| |||||||||||| |||
Sbjct: 38538900 tatcggctttatttctcattcatcaggcgctcagccaggagcaagtcatcaggagtcgtc 38538841

                    
Query: 244      acct 247
                ||||
Sbjct: 38538840 acct 38538837



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                            
Query: 367      cctcctttatagtagctttgacgggcacaccgagaacagctgctccatgcaccgcagcat 426
                ||||||| ||||||||||| || |||||||| |||||||| ||||| |||||   |||||
Sbjct: 38538202 cctccttgatagtagctttcacaggcacaccaagaacagcagctccgtgcactatagcat 38538143

                            
Query: 427      cttctaagacct 438
                ||||||| ||||
Sbjct: 38538142 cttctaatacct 38538131



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                         
Query: 244      accttgatgtttgtataagagccctcggtgatgtaaacaggatgtttcaagtattct 300
                ||||| |||||||| ||||||||||| ||||| |||||||  || |||| |||||||
Sbjct: 38538748 acctttatgtttgtgtaagagccctctgtgatataaacagagtgcttcaggtattct 38538692



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                               
Query: 34       gaaagaatgttacatacaggttatatatctcgtgtatgagctacatg 80
                ||||||||||||||||||||| |  ||||| |||| || ||||||||
Sbjct: 38539047 gaaagaatgttacatacaggtcagctatctggtgtctgggctacatg 38539001
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>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence
          Length = 193444

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 58/61 (95%)
 Strand = Plus / Minus

                                                                          
Query: 303    ggagtttgcatttcccaaagagttttcctatcaagggtttttacgacgaaagaatcgctg 362
              ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 131516 ggagtttgcatttcccaaagagttttcctatcaagtgtttttacgacaaaagaattgctg 131457

               
Query: 363    t 363
              |
Sbjct: 131456 t 131456



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                          
Query: 435    acctttttcacatcttcagaggataccaagggtcttgcagaatcatggacacaaacaagt 494
              |||||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 130847 acctttttgacatcttcagatgacactaagggccttgcagaatcatgtacacaaacaagt 130788

                                     
Query: 495    tctgaatctccattaatttcctg 517
              || || ||||||| ||| |||||
Sbjct: 130787 tcagagtctccatcaatctcctg 130765



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                          
Query: 184    tatcggccctatttatcattcatcaaacgctcagctaggagcatgtcatcaggagtagtc 243
              |||||||  ||||| ||||||||||  |||||||| ||||||| |||||||||||| |||
Sbjct: 131986 tatcggctttatttctcattcatcaggcgctcagccaggagcaagtcatcaggagtcgtc 131927

                  
Query: 244    acct 247
              ||||
Sbjct: 131926 acct 131923



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                          
Query: 367    cctcctttatagtagctttgacgggcacaccgagaacagctgctccatgcaccgcagcat 426
              ||||||| ||||||||||| || |||||||| |||||||| ||||| |||||   |||||
Sbjct: 131288 cctccttgatagtagctttcacaggcacaccaagaacagcagctccgtgcactatagcat 131229

                          
Query: 427    cttctaagacct 438
              ||||||| ||||
Sbjct: 131228 cttctaatacct 131217



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                       
Query: 244    accttgatgtttgtataagagccctcggtgatgtaaacaggatgtttcaagtattct 300
              ||||| |||||||| ||||||||||| ||||| |||||||  || |||| |||||||
Sbjct: 131834 acctttatgtttgtgtaagagccctctgtgatataaacagagtgcttcaggtattct 131778



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 34     gaaagaatgttacatacaggttatatatctcgtgtatgagctacatg 80
              ||||||||||||||||||||| |  ||||| |||| || ||||||||
Sbjct: 132133 gaaagaatgttacatacaggtcagctatctggtgtctgggctacatg 132087
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>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0434C04
          Length = 150064

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 58/61 (95%)
 Strand = Plus / Minus

                                                                         
Query: 303   ggagtttgcatttcccaaagagttttcctatcaagggtttttacgacgaaagaatcgctg 362
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 59111 ggagtttgcatttcccaaagagttttcctatcaagtgtttttacgacaaaagaattgctg 59052

              
Query: 363   t 363
             |
Sbjct: 59051 t 59051



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 435   acctttttcacatcttcagaggataccaagggtcttgcagaatcatggacacaaacaagt 494
             |||||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 58442 acctttttgacatcttcagatgacactaagggccttgcagaatcatgtacacaaacaagt 58383

                                    
Query: 495   tctgaatctccattaatttcctg 517
             || || ||||||| ||| |||||
Sbjct: 58382 tcagagtctccatcaatctcctg 58360



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                         
Query: 184   tatcggccctatttatcattcatcaaacgctcagctaggagcatgtcatcaggagtagtc 243
             |||||||  ||||| ||||||||||  |||||||| ||||||| |||||||||||| |||
Sbjct: 59581 tatcggctttatttctcattcatcaggcgctcagccaggagcaagtcatcaggagtcgtc 59522

                 
Query: 244   acct 247
             ||||
Sbjct: 59521 acct 59518



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                         
Query: 367   cctcctttatagtagctttgacgggcacaccgagaacagctgctccatgcaccgcagcat 426
             ||||||| ||||||||||| || |||||||| |||||||| ||||| |||||   |||||
Sbjct: 58883 cctccttgatagtagctttcacaggcacaccaagaacagcagctccgtgcactatagcat 58824

                         
Query: 427   cttctaagacct 438
             ||||||| ||||
Sbjct: 58823 cttctaatacct 58812



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 244   accttgatgtttgtataagagccctcggtgatgtaaacaggatgtttcaagtattct 300
             ||||| |||||||| ||||||||||| ||||| |||||||  || |||| |||||||
Sbjct: 59429 acctttatgtttgtgtaagagccctctgtgatataaacagagtgcttcaggtattct 59373



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 34    gaaagaatgttacatacaggttatatatctcgtgtatgagctacatg 80
             ||||||||||||||||||||| |  ||||| |||| || ||||||||
Sbjct: 59728 gaaagaatgttacatacaggtcagctatctggtgtctgggctacatg 59682
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>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0408G07
          Length = 126631

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 58/61 (95%)
 Strand = Plus / Minus

                                                                          
Query: 303    ggagtttgcatttcccaaagagttttcctatcaagggtttttacgacgaaagaatcgctg 362
              ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 123845 ggagtttgcatttcccaaagagttttcctatcaagtgtttttacgacaaaagaattgctg 123786

               
Query: 363    t 363
              |
Sbjct: 123785 t 123785



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                          
Query: 435    acctttttcacatcttcagaggataccaagggtcttgcagaatcatggacacaaacaagt 494
              |||||||| ||||||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 123176 acctttttgacatcttcagatgacactaagggccttgcagaatcatgtacacaaacaagt 123117

                                     
Query: 495    tctgaatctccattaatttcctg 517
              || || ||||||| ||| |||||
Sbjct: 123116 tcagagtctccatcaatctcctg 123094



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                          
Query: 184    tatcggccctatttatcattcatcaaacgctcagctaggagcatgtcatcaggagtagtc 243
              |||||||  ||||| ||||||||||  |||||||| ||||||| |||||||||||| |||
Sbjct: 124315 tatcggctttatttctcattcatcaggcgctcagccaggagcaagtcatcaggagtcgtc 124256

                  
Query: 244    acct 247
              ||||
Sbjct: 124255 acct 124252



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                          
Query: 367    cctcctttatagtagctttgacgggcacaccgagaacagctgctccatgcaccgcagcat 426
              ||||||| ||||||||||| || |||||||| |||||||| ||||| |||||   |||||
Sbjct: 123617 cctccttgatagtagctttcacaggcacaccaagaacagcagctccgtgcactatagcat 123558

                          
Query: 427    cttctaagacct 438
              ||||||| ||||
Sbjct: 123557 cttctaatacct 123546



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                       
Query: 244    accttgatgtttgtataagagccctcggtgatgtaaacaggatgtttcaagtattct 300
              ||||| |||||||| ||||||||||| ||||| |||||||  || |||| |||||||
Sbjct: 124163 acctttatgtttgtgtaagagccctctgtgatataaacagagtgcttcaggtattct 124107



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 34     gaaagaatgttacatacaggttatatatctcgtgtatgagctacatg 80
              ||||||||||||||||||||| |  ||||| |||| || ||||||||
Sbjct: 124462 gaaagaatgttacatacaggtcagctatctggtgtctgggctacatg 124416
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>gb|DQ269452.2| Stevia rebaudiana 4-diphosphocytidyl-2-C-methyl-D-erythritol
           synthase mRNA, complete cds
          Length = 1250

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 235 ggagtagtcaccttgatgtttgtataagagccctcggtgatgtaaacaggatgttt 290
           ||||| || ||||||||||| |||||||| || |  |||||||| |||||||||||
Sbjct: 974 ggagttgtaaccttgatgttagtataagatccttgtgtgatgtatacaggatgttt 919



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 303 ggagtttgcatttcccaaagagtttt 328
           |||||||||||||||||||| |||||
Sbjct: 821 ggagtttgcatttcccaaagggtttt 796
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>ref|NM_126305.2| Arabidopsis thaliana ATMEPCT/ISPD (2-C-METHYL-D-ERYTHRITOL
           4-PHOSPHATE CYTIDYLTRANSFERASE);
           4-diphosphocytidyl-2C-methyl-D-erythritol synthase
           AT2G02500 (ATMEPCT/ISPD) mRNA, complete cds
          Length = 1116

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 229 tcatcaggagtagtcaccttgatgtttgtataaga 263
           |||||||| || || ||||||||||||||||||||
Sbjct: 900 tcatcaggtgttgtaaccttgatgtttgtataaga 866
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>gb|BT006120.1| Arabidopsis thaliana clone U50856 putative sugar nucleotide
           phosphorylase (At2g02500) mRNA, complete cds
          Length = 940

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 229 tcatcaggagtagtcaccttgatgtttgtataaga 263
           |||||||| || || ||||||||||||||||||||
Sbjct: 869 tcatcaggtgttgtaaccttgatgtttgtataaga 835
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>gb|AF230737.1|AF230737 Arabidopsis thaliana 4-Diphosphocytidyl-2C-methyl-D-erythritol
           synthase (ISPD) mRNA, complete cds
          Length = 909

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 229 tcatcaggagtagtcaccttgatgtttgtataaga 263
           |||||||| || || ||||||||||||||||||||
Sbjct: 869 tcatcaggtgttgtaaccttgatgtttgtataaga 835
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>dbj|AK118110.1| Arabidopsis thaliana At2g02500 mRNA for putative
           2-C-methyl-D-erythritol 4-phosphate cytidyltransferase,
           complete cds, clone: RAFL19-37-P21
          Length = 1060

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 229 tcatcaggagtagtcaccttgatgtttgtataaga 263
           |||||||| || || ||||||||||||||||||||
Sbjct: 900 tcatcaggtgttgtaaccttgatgtttgtataaga 866
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>dbj|AB037876.1| Arabidopsis thaliana ATMEPCT mRNA for 2-C-methyl-D-erythritol
           4-phosphate cytidyltransferase, complete cds
          Length = 1106

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 229 tcatcaggagtagtcaccttgatgtttgtataaga 263
           |||||||| || || ||||||||||||||||||||
Sbjct: 875 tcatcaggtgttgtaaccttgatgtttgtataaga 841
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>gb|AC139131.19| Mus musculus chromosome 7, clone RP23-301N20, complete sequence
          Length = 230772

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 178    tgttcatatcggccctatttat 199
              ||||||||||||||||||||||
Sbjct: 174721 tgttcatatcggccctatttat 174700
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>gb|AC114404.12| Mus musculus chromosome 7, clone RP24-350D24, complete sequence
          Length = 188585

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 178  tgttcatatcggccctatttat 199
            ||||||||||||||||||||||
Sbjct: 2888 tgttcatatcggccctatttat 2867
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>emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 in linkage group 6,
             complete sequence
          Length = 171645

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    tgtttatttttctagtttcca 99
             |||||||||||||||||||||
Sbjct: 58212 tgtttatttttctagtttcca 58192
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>gb|AC099008.1| Drosophila melanogaster, chromosome 2R, region 50B-50C, BAC clone
            BACR16G12, complete sequence
          Length = 154681

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 311  catttcccaaagagttttcct 331
            |||||||||||||||||||||
Sbjct: 7870 catttcccaaagagttttcct 7890
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>gb|AC007851.6|AC007851 Drosophila melanogaster, chromosome 2R, region 50C-50D, BAC clone
             BACR06M19, complete sequence
          Length = 183161

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 311   catttcccaaagagttttcct 331
             |||||||||||||||||||||
Sbjct: 91301 catttcccaaagagttttcct 91321
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>gb|AE003816.4| Drosophila melanogaster chromosome 2R, section 34 of 73 of the complete
             sequence
          Length = 287287

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 311   catttcccaaagagttttcct 331
             |||||||||||||||||||||
Sbjct: 80939 catttcccaaagagttttcct 80919
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>gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome 14, complete sequence
          Length = 212930

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 440    tttcacatcttcagaggata 459
              ||||||||||||||||||||
Sbjct: 112143 tttcacatcttcagaggata 112162
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 272     tgatgtaaacaggatgtttc 291
               ||||||||||||||||||||
Sbjct: 3386466 tgatgtaaacaggatgtttc 3386447
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>emb|AL356967.23| Human DNA sequence from clone RP11-427E4 on chromosome 6 Contains a
             novel pseudogene, complete sequence
          Length = 163869

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    tttatttttctagtttccaa 100
             ||||||||||||||||||||
Sbjct: 39342 tttatttttctagtttccaa 39361
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>emb|BX545915.7| Zebrafish DNA sequence from clone DKEY-41B16 in linkage group 3, complete
              sequence
          Length = 192468

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 305    agtttgcatttcccaaagagtttt 328
              ||||||||||||||| ||||||||
Sbjct: 158464 agtttgcatttcccatagagtttt 158441
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>emb|BX537453.3|RN86L3 Rattus norvegicus chromosome 1 BAC RP32-86L3, complete sequence
          Length = 154099

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   ttttcctatcaagggttttt 344
             ||||||||||||||||||||
Sbjct: 77550 ttttcctatcaagggttttt 77531
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>emb|CR628312.1| Human DNA sequence from clone XX-NCIH2171_8J01, complete sequence
          Length = 112000

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 436  cctttttcacatcttcagag 455
            ||||||||||||||||||||
Sbjct: 9586 cctttttcacatcttcagag 9605
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>gb|AC004136.3| Arabidopsis thaliana chromosome 2 BAC T8K22 genomic sequence, complete
             sequence
          Length = 98957

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   accttgatgtttgtataaga 263
             ||||||||||||||||||||
Sbjct: 81791 accttgatgtttgtataaga 81772
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>gb|AC116428.1| Homo sapiens chromosome 5 clone CTD-2587M2, complete sequence
          Length = 153204

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   tctcaaatcaagtaaatatt 178
             ||||||||||||||||||||
Sbjct: 58859 tctcaaatcaagtaaatatt 58878
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>gb|AC099669.2| Homo sapiens chromosome 3 clone RP11-944L7, complete sequence
          Length = 217035

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   tgtggaaaggcaatggaatt 131
             ||||||||||||||||||||
Sbjct: 12793 tgtggaaaggcaatggaatt 12812
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>gb|AC010197.7| Homo sapiens 12p12p11-37.2-54.4 BAC RP11-92H16 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 151011

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   cctttttcacatcttcagag 455
             ||||||||||||||||||||
Sbjct: 97566 cctttttcacatcttcagag 97585
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>emb|BX005394.8| Zebrafish DNA sequence from clone DKEY-3N15 in linkage group 3, complete
              sequence
          Length = 190575

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 161    tcaaatcaagtaaatattgttcat 184
              |||||||||||||||||| |||||
Sbjct: 104149 tcaaatcaagtaaatattattcat 104172
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>gb|AC112699.3| Homo sapiens BAC clone RP11-725F20 from 2, complete sequence
          Length = 60933

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   gccaaaattgtggaaaggca 123
             ||||||||||||||||||||
Sbjct: 40631 gccaaaattgtggaaaggca 40612
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>gb|AC073641.3| Homo sapiens BAC clone RP11-368E14 from 2, complete sequence
          Length = 197709

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    tgcatttcccaaagagtttt 328
              ||||||||||||||||||||
Sbjct: 112828 tgcatttcccaaagagtttt 112809
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>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM,
             complete sequence
          Length = 107931

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 288   tttcaagtattctgcggagtttgc 311
             ||||||||||||||| ||||||||
Sbjct: 82878 tttcaagtattctgcagagtttgc 82901
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>gb|DQ072004.1| Streptococcus pneumoniae isolate 14763 penicillin binding protein
           (pbp1a) gene, partial cds
          Length = 1121

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 212 gctcagctaggagcatgtcatcag 235
           ||||||||||||||| ||||||||
Sbjct: 106 gctcagctaggagcacgtcatcag 129
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>gb|AY609879.1| Sus scrofa clone Clu_3761.scr.msk.p1.Contig8, mRNA sequence
          Length = 803

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 ttgcatttcccaaagagttt 327
           ||||||||||||||||||||
Sbjct: 187 ttgcatttcccaaagagttt 168
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>dbj|AP006136.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT30K08, TM0237,
             complete sequence
          Length = 114468

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atgtttatttttctagtttc 97
             ||||||||||||||||||||
Sbjct: 35171 atgtttatttttctagtttc 35190
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>gb|AC138293.11| Mus musculus chromosome 18, clone RP23-33P24, complete sequence
          Length = 235495

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    ctcagctaggagcatgtcat 232
              ||||||||||||||||||||
Sbjct: 200174 ctcagctaggagcatgtcat 200193
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>emb|AL773564.8| Zebrafish DNA sequence from clone CH211-204C7, complete sequence
          Length = 159763

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   tttcctatcaagggttttta 345
             ||||||||||||||||||||
Sbjct: 84380 tttcctatcaagggttttta 84361
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>dbj|AB021490.2| Oryzias latipes gene for membrane guanylyl cyclase OlGC1, complete cds
          Length = 96891

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    agtttccaagaggccaaaat 111
             ||||||||||||||||||||
Sbjct: 40432 agtttccaagaggccaaaat 40451


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,546,867
Number of Sequences: 3902068
Number of extensions: 5546867
Number of successful extensions: 105057
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104902
Number of HSP's gapped (non-prelim): 155
length of query: 522
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 499
effective length of database: 17,143,297,704
effective search space: 8554505554296
effective search space used: 8554505554296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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