Clone Name | rbart33b05 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 101 bits (252), Expect = 7e-22 Identities = 41/68 (60%), Positives = 53/68 (77%) Frame = -2 Query: 400 WQRQWDKWTAAYPSAQIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYE 221 W+ WDKWTAAYP+ + Y+GL A ++ +VHPKN+YYGV V QK NYGG+M+W+RY Sbjct: 231 WEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYF 290 Query: 220 DKRTNYSS 197 DK+TNYSS Sbjct: 291 DKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 84.7 bits (208), Expect = 8e-17 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 8/91 (8%) Frame = -2 Query: 427 YDDADCAANW------QRQWDKWTAAYPSAQIYLGLPASEQ--KVGYVHPKNLYYGVIQV 272 YDDA C+ N QW+KWTA YP + +YLGL A+ K V K LYY ++ Sbjct: 214 YDDATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPN 273 Query: 271 VQKAANYGGVMVWERYEDKRTNYSSYAIQWA 179 VQKA NYGG+M+W+R+ DK+T Y WA Sbjct: 274 VQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 75.5 bits (184), Expect = 5e-14 Identities = 31/77 (40%), Positives = 52/77 (67%), Gaps = 1/77 (1%) Frame = -2 Query: 427 YDDADCAANWQRQWDKWTAAYPSAQIYLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANY 251 + D C + + W+KW AA+P +++Y+GL AS EQ ++ K+LYY ++Q V+ NY Sbjct: 211 FGDEQCTMSPRYSWEKWAAAFPGSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNY 270 Query: 250 GGVMVWERYEDKRTNYS 200 GG+ +++RY DK+ NY+ Sbjct: 271 GGLAIYDRYFDKKANYT 287
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 59.7 bits (143), Expect = 3e-09 Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 2/66 (3%) Frame = -2 Query: 388 WDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDK 215 W++WT + + +I+LGLPA+ + G YV P L ++ ++K+ YGGVM+W ++ D Sbjct: 228 WNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDD 287 Query: 214 RTNYSS 197 + YSS Sbjct: 288 KNGYSS 293
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 58.2 bits (139), Expect = 8e-09 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Frame = -2 Query: 388 WDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDK 215 W+KWT + + + +LGLPA+ + G Y+ P L ++ ++K+ YGGVM+W ++ D Sbjct: 231 WNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDD 290 Query: 214 RTNYSS 197 + YSS Sbjct: 291 KNGYSS 296
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 57.0 bits (136), Expect = 2e-08 Identities = 28/84 (33%), Positives = 53/84 (63%), Gaps = 7/84 (8%) Frame = -2 Query: 427 YDDADC-----AANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVV 269 Y++ +C + N++R+W++WT+ P+ ++Y+GLPA++ G Y+ + L V+ + Sbjct: 206 YNNPECEFMSNSENFKRRWNQWTSI-PAKKLYIGLPAAKTAAGNGYIPKQVLMSQVLPFL 264 Query: 268 QKAANYGGVMVWERYEDKRTNYSS 197 + ++ YGGVM+W R D + YSS Sbjct: 265 KGSSKYGGVMLWNRKFDVQCGYSS 288
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 55.8 bits (133), Expect = 4e-08 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%) Frame = -2 Query: 403 NWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 230 N W++WT++ S ++GLPAS G ++ L ++ V++++ YGGVM+W Sbjct: 225 NLLNSWNRWTSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWS 284 Query: 229 RYEDKRTNYSS 197 +Y D ++ YSS Sbjct: 285 KYYDDQSGYSS 295
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 53.5 bits (127), Expect = 2e-07 Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 3/70 (4%) Frame = -2 Query: 418 ADCAANWQRQWDKWTAAYPSAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYG 248 AD A N W++WTA +P++++Y+GLPA+ + G++ L V+ ++ ++NYG Sbjct: 212 ADNADNLLSSWNQWTA-FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYG 270 Query: 247 GVMVWERYED 218 GVM+W + D Sbjct: 271 GVMLWSKAFD 280
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 50.8 bits (120), Expect = 1e-06 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 3/72 (4%) Frame = -2 Query: 403 NWQRQWDKWTAAYPSAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVW 233 N W++WT++ + Q++LG+PAS+ G + L V+ ++ + YGGVM+W Sbjct: 217 NLVNAWNQWTSSQ-AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIW 275 Query: 232 ERYEDKRTNYSS 197 +R+ D ++ YS+ Sbjct: 276 DRFNDAQSGYSN 287
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 50.1 bits (118), Expect = 2e-06 Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 2/69 (2%) Frame = -2 Query: 388 WDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDK 215 W++WT++ + Q++LG+PAS G ++ L V+ ++ ++ YGGVM+W+R+ D Sbjct: 228 WNQWTSSQ-AKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDG 286 Query: 214 RTNYSSYAI 188 ++ YS I Sbjct: 287 QSGYSGAII 295
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 46.2 bits (108), Expect = 3e-05 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Frame = -2 Query: 409 AANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMV 236 A N W++WT + QI+LGLPAS G ++ L V+ ++ +A YGGVM+ Sbjct: 218 ADNLLSSWNQWTTVQAN-QIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVML 276 Query: 235 WERYEDKRTNYSS 197 W + D + YSS Sbjct: 277 WSKAYD--SGYSS 287
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 44.3 bits (103), Expect = 1e-04 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%) Frame = -2 Query: 409 AANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMV 236 A N + W++W A + +I+LGLPA++ G ++ L V+ ++ + YGGVM+ Sbjct: 216 ADNLKNYWNQWNAIQ-AGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVML 274 Query: 235 WERYEDKRTNYSS 197 W ++ D YSS Sbjct: 275 WSKFYD--NGYSS 285
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 43.1 bits (100), Expect = 3e-04 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 12/94 (12%) Frame = -2 Query: 427 YDDADC---AANWQR---QWDKWT-AAYP-SAQIYLGLPASEQKV---GYVHPKNLYYGV 281 Y+D C N QR W WT + YP ++L LPAS+ GY+ P L V Sbjct: 214 YNDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGGYIPPSALIGQV 273 Query: 280 IQVVQKA-ANYGGVMVWERYEDKRTNYSSYAIQW 182 + + Y G+ +W R DK T YS+ I++ Sbjct: 274 LPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 37.4 bits (85), Expect = 0.015 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 8/69 (11%) Frame = -2 Query: 412 CAANWQRQWDKW------TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAA 257 C+ + Q WD W + + +++LGLP S G Y+ +L I + ++ Sbjct: 218 CSVSGQFNWDTWLTYAQTVSPNKNIKLFLGLPGSASAAGSGYISDTSLLESTIADIASSS 277 Query: 256 NYGGVMVWE 230 ++GG+ +W+ Sbjct: 278 SFGGIALWD 286
>CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14)| Length = 462 Score = 36.6 bits (83), Expect = 0.026 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Frame = -2 Query: 412 CAANWQRQWDKWT--AAYPSAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGG 245 C+ N Q W+ W+ A S ++YLGLP S G+V + V+ ++ +++GG Sbjct: 208 CSLNQQFNWNSWSNYARGKSIKLYLGLPGSSSSAGSGFVGLSTV-QRVVASIKGDSSFGG 266 Query: 244 VMVWE 230 + +W+ Sbjct: 267 ISIWD 271
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 35.0 bits (79), Expect = 0.075 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 5/66 (7%) Frame = -2 Query: 412 CAANWQRQWDKWTAAYPSA-----QIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYG 248 C+ N Q +D W+ SA ++++G+PA+ GYV L I+ ++ +++ Sbjct: 215 CSINGQFNYDTWSKFADSAPNKNIKLFVGVPATSNIAGYVDTSKL-SSAIEEIKCDSHFA 273 Query: 247 GVMVWE 230 GV +W+ Sbjct: 274 GVSLWD 279
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 32.3 bits (72), Expect = 0.49 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Frame = -2 Query: 388 WDKW---TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 230 WD W T+ + +I +P S G YV L V + K ++YGGV VW+ Sbjct: 236 WDNWAKTTSPNKNVKIMFTVPGSSTAAGSGYVPMSTLQTIVPSLASKYSSYGGVSVWD 293
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Frame = -2 Query: 388 WDKW---TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 230 WD W T+ + +I +P S G YV L V + + ++YGGV VW+ Sbjct: 236 WDNWAKTTSPNKNVKIMFTIPGSPTAAGSGYVPMSTLQTIVPSLASEYSSYGGVSVWD 293
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)| Length = 860 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Frame = -2 Query: 364 PSAQIYLGLPASEQ---KVGYVHPKNLYYGVIQVVQK-AANYGGVMVWE 230 P A++++GLPAS+ K Y+ P V + K + +GG+MVWE Sbjct: 267 PLAKLFIGLPASKSAAAKEDYLTPGEATKIVSTYMAKYPSTFGGMMVWE 315
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 30.0 bits (66), Expect = 2.4 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Frame = -1 Query: 401 LAEAVGQVDGGVSVGADLPRAAGVRAEGRL---RSSKEPLLRRHTGGAEGGQLWRGHGLG 231 L +A + GG + G + R A R+ RSS P RR GGA GG RG G Sbjct: 997 LCDAGTAISGGKAEG-EKGRRRSSPARSRIKQGRSSSFPGRRRPRGGAHGG---RGRGRA 1052 Query: 230 TLRGQADKLQQL 195 L+ A ++ L Sbjct: 1053 RLKSTASSIETL 1064
>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 350 Score = 30.0 bits (66), Expect = 2.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 334 ASEQKVGYVHPKNLYYGVIQVVQKA 260 A +++GYVHP YYG + VQ A Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126
>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)| Length = 623 Score = 28.9 bits (63), Expect = 5.4 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 304 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 182 P + GV++V++ Y GV +W R D + Y+++ + W Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319
>Y590_METJA (Q58010) Hypothetical protein MJ0590| Length = 704 Score = 28.9 bits (63), Expect = 5.4 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 400 WQRQWDKWTAAYPSAQIYLGLPASEQKVGYVHPKNL 293 W R ++ +YP + +G +E KVGY KNL Sbjct: 2 WGRDYELKYISYPKSVAIIGASKTEGKVGYAIMKNL 37
>FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor| Length = 873 Score = 28.5 bits (62), Expect = 7.1 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -3 Query: 306 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQIT 202 +QR T+A Y + GSWSG SGQ+T Sbjct: 620 VQRAGTSAQY-------ALNGSWSGTYGEVSGQLT 647
>WDR50_DROME (Q9V7P1) Hypothetical WD-repeat protein l(2)k07824| Length = 506 Score = 28.5 bits (62), Expect = 7.1 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -2 Query: 373 AAYPSAQIYLGLPASEQKVGYV 308 A +PSA +Y PA +KVG+V Sbjct: 453 AHFPSATVYSNFPAQNEKVGFV 474
>SYA_STAES (Q8CSA7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 28.5 bits (62), Expect = 7.1 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -1 Query: 389 VGQVDGGVSVGADLPRAAGVRAE-GRLRSSKEPLLRRHTGGAEGGQLWRGHGLGT 228 VGQVDG VSV A +P++ + + G L + P++ GG GG+ G GT Sbjct: 807 VGQVDGKVSVIATVPKSLTNQVKAGDLIKNMTPII----GGKGGGRPDMAQGGGT 857
>SYA_STAEQ (Q5HNT2) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 28.5 bits (62), Expect = 7.1 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -1 Query: 389 VGQVDGGVSVGADLPRAAGVRAE-GRLRSSKEPLLRRHTGGAEGGQLWRGHGLGT 228 VGQVDG VSV A +P++ + + G L + P++ GG GG+ G GT Sbjct: 807 VGQVDGKVSVIATVPKSLTNQVKAGDLIKNMTPII----GGKGGGRPDMAQGGGT 857
>RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulator-like 2| (RalGDS-like factor) (RAS-associated protein RAB2L) Length = 778 Score = 28.1 bits (61), Expect = 9.2 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 301 LDERNRPSALTPAARGRSAPTDTPPS 378 L +R RPSA TP + + + TPPS Sbjct: 731 LRQRRRPSAATPGSHSGPSASGTPPS 756 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,704,886 Number of Sequences: 219361 Number of extensions: 1025060 Number of successful extensions: 3939 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3682 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3926 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)