ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart33b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 101 7e-22
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 85 8e-17
3XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 75 5e-14
4CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 60 3e-09
5CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 58 8e-09
6CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14) 57 2e-08
7CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 56 4e-08
8CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14) 54 2e-07
9CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 51 1e-06
10CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 50 2e-06
11CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1... 46 3e-05
12CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14) 44 1e-04
13CONB_CANEN (P49347) Concanavalin B precursor (Con B) 43 3e-04
14CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Solub... 37 0.015
15CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14) 37 0.026
16CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14) 35 0.075
17CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14) 32 0.49
18CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14) 31 1.4
19CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14) 30 1.9
20MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p... 30 2.4
21HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.... 30 2.4
22VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI) 29 5.4
23Y590_METJA (Q58010) Hypothetical protein MJ0590 29 5.4
24FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor 28 7.1
25WDR50_DROME (Q9V7P1) Hypothetical WD-repeat protein l(2)k07824 28 7.1
26SYA_STAES (Q8CSA7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 28 7.1
27SYA_STAEQ (Q5HNT2) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 28 7.1
28RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulat... 28 9.2

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score =  101 bits (252), Expect = 7e-22
 Identities = 41/68 (60%), Positives = 53/68 (77%)
 Frame = -2

Query: 400 WQRQWDKWTAAYPSAQIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYE 221
           W+  WDKWTAAYP+ + Y+GL A ++   +VHPKN+YYGV  V QK  NYGG+M+W+RY 
Sbjct: 231 WEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYF 290

Query: 220 DKRTNYSS 197
           DK+TNYSS
Sbjct: 291 DKQTNYSS 298



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>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 84.7 bits (208), Expect = 8e-17
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
 Frame = -2

Query: 427 YDDADCAANW------QRQWDKWTAAYPSAQIYLGLPASEQ--KVGYVHPKNLYYGVIQV 272
           YDDA C+ N         QW+KWTA YP + +YLGL A+    K   V  K LYY ++  
Sbjct: 214 YDDATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPN 273

Query: 271 VQKAANYGGVMVWERYEDKRTNYSSYAIQWA 179
           VQKA NYGG+M+W+R+ DK+T Y      WA
Sbjct: 274 VQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304



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>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 75.5 bits (184), Expect = 5e-14
 Identities = 31/77 (40%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = -2

Query: 427 YDDADCAANWQRQWDKWTAAYPSAQIYLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANY 251
           + D  C  + +  W+KW AA+P +++Y+GL AS EQ   ++  K+LYY ++Q V+   NY
Sbjct: 211 FGDEQCTMSPRYSWEKWAAAFPGSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNY 270

Query: 250 GGVMVWERYEDKRTNYS 200
           GG+ +++RY DK+ NY+
Sbjct: 271 GGLAIYDRYFDKKANYT 287



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>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
 Frame = -2

Query: 388 WDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDK 215
           W++WT +  + +I+LGLPA+ +  G  YV P  L   ++  ++K+  YGGVM+W ++ D 
Sbjct: 228 WNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDD 287

Query: 214 RTNYSS 197
           +  YSS
Sbjct: 288 KNGYSS 293



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>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
 Frame = -2

Query: 388 WDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDK 215
           W+KWT +  + + +LGLPA+ +  G  Y+ P  L   ++  ++K+  YGGVM+W ++ D 
Sbjct: 231 WNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDD 290

Query: 214 RTNYSS 197
           +  YSS
Sbjct: 291 KNGYSS 296



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>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)|
          Length = 294

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 28/84 (33%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
 Frame = -2

Query: 427 YDDADC-----AANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVV 269
           Y++ +C     + N++R+W++WT+  P+ ++Y+GLPA++   G  Y+  + L   V+  +
Sbjct: 206 YNNPECEFMSNSENFKRRWNQWTSI-PAKKLYIGLPAAKTAAGNGYIPKQVLMSQVLPFL 264

Query: 268 QKAANYGGVMVWERYEDKRTNYSS 197
           + ++ YGGVM+W R  D +  YSS
Sbjct: 265 KGSSKYGGVMLWNRKFDVQCGYSS 288



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>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = -2

Query: 403 NWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 230
           N    W++WT++  S   ++GLPAS    G  ++    L   ++ V++++  YGGVM+W 
Sbjct: 225 NLLNSWNRWTSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWS 284

Query: 229 RYEDKRTNYSS 197
           +Y D ++ YSS
Sbjct: 285 KYYDDQSGYSS 295



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>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 292

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
 Frame = -2

Query: 418 ADCAANWQRQWDKWTAAYPSAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYG 248
           AD A N    W++WTA +P++++Y+GLPA+ +     G++    L   V+  ++ ++NYG
Sbjct: 212 ADNADNLLSSWNQWTA-FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYG 270

Query: 247 GVMVWERYED 218
           GVM+W +  D
Sbjct: 271 GVMLWSKAFD 280



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>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
 Frame = -2

Query: 403 NWQRQWDKWTAAYPSAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVW 233
           N    W++WT++  + Q++LG+PAS+      G +    L   V+  ++ +  YGGVM+W
Sbjct: 217 NLVNAWNQWTSSQ-AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIW 275

Query: 232 ERYEDKRTNYSS 197
           +R+ D ++ YS+
Sbjct: 276 DRFNDAQSGYSN 287



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>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
 Frame = -2

Query: 388 WDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDK 215
           W++WT++  + Q++LG+PAS    G  ++    L   V+  ++ ++ YGGVM+W+R+ D 
Sbjct: 228 WNQWTSSQ-AKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDG 286

Query: 214 RTNYSSYAI 188
           ++ YS   I
Sbjct: 287 QSGYSGAII 295



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>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)|
          Length = 293

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
 Frame = -2

Query: 409 AANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMV 236
           A N    W++WT    + QI+LGLPAS    G  ++    L   V+  ++ +A YGGVM+
Sbjct: 218 ADNLLSSWNQWTTVQAN-QIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVML 276

Query: 235 WERYEDKRTNYSS 197
           W +  D  + YSS
Sbjct: 277 WSKAYD--SGYSS 287



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>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 291

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = -2

Query: 409 AANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMV 236
           A N +  W++W A   + +I+LGLPA++   G  ++    L   V+ ++  +  YGGVM+
Sbjct: 216 ADNLKNYWNQWNAIQ-AGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVML 274

Query: 235 WERYEDKRTNYSS 197
           W ++ D    YSS
Sbjct: 275 WSKFYD--NGYSS 285



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>CONB_CANEN (P49347) Concanavalin B precursor (Con B)|
          Length = 324

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
 Frame = -2

Query: 427 YDDADC---AANWQR---QWDKWT-AAYP-SAQIYLGLPASEQKV---GYVHPKNLYYGV 281
           Y+D  C     N QR    W  WT + YP    ++L LPAS+      GY+ P  L   V
Sbjct: 214 YNDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGGYIPPSALIGQV 273

Query: 280 IQVVQKA-ANYGGVMVWERYEDKRTNYSSYAIQW 182
           +  +      Y G+ +W R  DK T YS+  I++
Sbjct: 274 LPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307



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>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall|
           protein 2)
          Length = 562

 Score = 37.4 bits (85), Expect = 0.015
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
 Frame = -2

Query: 412 CAANWQRQWDKW------TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAA 257
           C+ + Q  WD W       +   + +++LGLP S    G  Y+   +L    I  +  ++
Sbjct: 218 CSVSGQFNWDTWLTYAQTVSPNKNIKLFLGLPGSASAAGSGYISDTSLLESTIADIASSS 277

Query: 256 NYGGVMVWE 230
           ++GG+ +W+
Sbjct: 278 SFGGIALWD 286



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>CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14)|
          Length = 462

 Score = 36.6 bits (83), Expect = 0.026
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = -2

Query: 412 CAANWQRQWDKWT--AAYPSAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGG 245
           C+ N Q  W+ W+  A   S ++YLGLP S      G+V    +   V+  ++  +++GG
Sbjct: 208 CSLNQQFNWNSWSNYARGKSIKLYLGLPGSSSSAGSGFVGLSTV-QRVVASIKGDSSFGG 266

Query: 244 VMVWE 230
           + +W+
Sbjct: 267 ISIWD 271



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>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)|
          Length = 583

 Score = 35.0 bits (79), Expect = 0.075
 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = -2

Query: 412 CAANWQRQWDKWTAAYPSA-----QIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYG 248
           C+ N Q  +D W+    SA     ++++G+PA+    GYV    L    I+ ++  +++ 
Sbjct: 215 CSINGQFNYDTWSKFADSAPNKNIKLFVGVPATSNIAGYVDTSKL-SSAIEEIKCDSHFA 273

Query: 247 GVMVWE 230
           GV +W+
Sbjct: 274 GVSLWD 279



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>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)|
          Length = 542

 Score = 32.3 bits (72), Expect = 0.49
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
 Frame = -2

Query: 388 WDKW---TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 230
           WD W   T+   + +I   +P S    G  YV    L   V  +  K ++YGGV VW+
Sbjct: 236 WDNWAKTTSPNKNVKIMFTVPGSSTAAGSGYVPMSTLQTIVPSLASKYSSYGGVSVWD 293



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>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)|
          Length = 540

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
 Frame = -2

Query: 388 WDKW---TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 230
           WD W   T+   + +I   +P S    G  YV    L   V  +  + ++YGGV VW+
Sbjct: 236 WDNWAKTTSPNKNVKIMFTIPGSPTAAGSGYVPMSTLQTIVPSLASEYSSYGGVSVWD 293



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>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)|
          Length = 860

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = -2

Query: 364 PSAQIYLGLPASEQ---KVGYVHPKNLYYGVIQVVQK-AANYGGVMVWE 230
           P A++++GLPAS+    K  Y+ P      V   + K  + +GG+MVWE
Sbjct: 267 PLAKLFIGLPASKSAAAKEDYLTPGEATKIVSTYMAKYPSTFGGMMVWE 315



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>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
 Frame = -1

Query: 401  LAEAVGQVDGGVSVGADLPRAAGVRAEGRL---RSSKEPLLRRHTGGAEGGQLWRGHGLG 231
            L +A   + GG + G +  R     A  R+   RSS  P  RR  GGA GG   RG G  
Sbjct: 997  LCDAGTAISGGKAEG-EKGRRRSSPARSRIKQGRSSSFPGRRRPRGGAHGG---RGRGRA 1052

Query: 230  TLRGQADKLQQL 195
             L+  A  ++ L
Sbjct: 1053 RLKSTASSIETL 1064



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>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 350

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 334 ASEQKVGYVHPKNLYYGVIQVVQKA 260
           A  +++GYVHP   YYG +  VQ A
Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126



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>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)|
          Length = 623

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 304 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 182
           P  +  GV++V++    Y GV +W  R  D  + Y+++ + W
Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319



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>Y590_METJA (Q58010) Hypothetical protein MJ0590|
          Length = 704

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 400 WQRQWDKWTAAYPSAQIYLGLPASEQKVGYVHPKNL 293
           W R ++    +YP +   +G   +E KVGY   KNL
Sbjct: 2   WGRDYELKYISYPKSVAIIGASKTEGKVGYAIMKNL 37



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>FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor|
          Length = 873

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 306 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQIT 202
           +QR  T+A Y        + GSWSG     SGQ+T
Sbjct: 620 VQRAGTSAQY-------ALNGSWSGTYGEVSGQLT 647



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>WDR50_DROME (Q9V7P1) Hypothetical WD-repeat protein l(2)k07824|
          Length = 506

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 373 AAYPSAQIYLGLPASEQKVGYV 308
           A +PSA +Y   PA  +KVG+V
Sbjct: 453 AHFPSATVYSNFPAQNEKVGFV 474



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>SYA_STAES (Q8CSA7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 876

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -1

Query: 389 VGQVDGGVSVGADLPRAAGVRAE-GRLRSSKEPLLRRHTGGAEGGQLWRGHGLGT 228
           VGQVDG VSV A +P++   + + G L  +  P++    GG  GG+     G GT
Sbjct: 807 VGQVDGKVSVIATVPKSLTNQVKAGDLIKNMTPII----GGKGGGRPDMAQGGGT 857



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>SYA_STAEQ (Q5HNT2) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 876

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -1

Query: 389 VGQVDGGVSVGADLPRAAGVRAE-GRLRSSKEPLLRRHTGGAEGGQLWRGHGLGT 228
           VGQVDG VSV A +P++   + + G L  +  P++    GG  GG+     G GT
Sbjct: 807 VGQVDGKVSVIATVPKSLTNQVKAGDLIKNMTPII----GGKGGGRPDMAQGGGT 857



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>RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulator-like 2|
           (RalGDS-like factor) (RAS-associated protein RAB2L)
          Length = 778

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 301 LDERNRPSALTPAARGRSAPTDTPPS 378
           L +R RPSA TP +    + + TPPS
Sbjct: 731 LRQRRRPSAATPGSHSGPSASGTPPS 756


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,704,886
Number of Sequences: 219361
Number of extensions: 1025060
Number of successful extensions: 3939
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3926
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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