>RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1)|
          Length = 230

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 32/64 (50%), Positives = 43/64 (67%)
 Frame = -1

Query: 448 LSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRDGENLIDCPLPMQGNCKDRVQ 269
           L SIRD+I+E  GFT  +ECNR   G +QL+QVY C+DR G  LI+CP+   G C   ++
Sbjct: 167 LESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIE 226

Query: 268 LPAF 257
            P+F
Sbjct: 227 FPSF 230

>RNLX_LYCES (P80196) Intracellular ribonuclease LX precursor (EC 3.1.27.1)|
           (RNase LX)
          Length = 237

 Score = 61.6 bits (148), Expect = 9e-10
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = -1

Query: 448 LSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRDGENLIDCPL-PMQGNCKDRV 272
           + SI+ AI +G G T  +ECN    G  QL+QVY C+D      IDCP+ P  G C  ++
Sbjct: 164 VESIKKAIEKGVGHTPFIECNVDSQGNHQLYQVYLCVDSSASKFIDCPIFPHGGKCGSKI 223

Query: 271 QLPAF*LN 248
           + P+F  N
Sbjct: 224 EFPSFSTN 231

>RNLE_LYCES (P80022) Extracellular ribonuclease LE precursor (EC 3.1.27.1)|
           (RNase LE)
          Length = 230

 Score = 61.6 bits (148), Expect = 9e-10
 Identities = 26/64 (40%), Positives = 40/64 (62%)
 Frame = -1

Query: 448 LSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRDGENLIDCPLPMQGNCKDRVQ 269
           L +IR+AI+   G+T  ++CN    G +QL+QVY C+D  G +LI+CP+   G C   ++
Sbjct: 167 LVNIRNAIKSAIGYTPWIQCNVDQSGNSQLYQVYICVDGSGSSLIECPIFPGGKCGTSIE 226

Query: 268 LPAF 257
            P F
Sbjct: 227 FPTF 230

>RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1)|
          Length = 222

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 23/64 (35%), Positives = 35/64 (54%)
 Frame = -1

Query: 448 LSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRDGENLIDCPLPMQGNCKDRVQ 269
           +  I + I++  GF   +ECN+     +QL+Q+Y C+D      I+CP+   G C  RVQ
Sbjct: 159 MKDIENTIKQVVGFAPGIECNKDSSHNSQLYQIYLCVDTSASKFINCPVMPHGRCDSRVQ 218

Query: 268 LPAF 257
            P F
Sbjct: 219 FPKF 222

>RNS1_PYRPY (O80322) Ribonuclease S-1 precursor (EC 3.1.27.1) (S1-RNase)|
          Length = 228

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = -1

Query: 448 LSSIRDAIREGTGFTA-NLECNRGVDGETQLFQVYQCIDRDGENLIDCPL-PMQG---NC 284
           L  I +AIR GT  T    +C +     T+L +V  C DRD +  I+CP  P QG   +C
Sbjct: 163 LVDIENAIRRGTNNTKPKFKCQKNTRTTTELVEVTLCSDRDLKKFINCPHGPPQGSRFSC 222

Query: 283 KDRVQ 269
              VQ
Sbjct: 223 PSSVQ 227

>RNS3_PYRPY (O80323) Ribonuclease S-3 precursor (EC 3.1.27.1) (S3-RNase)|
          Length = 222

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -1

Query: 448 LSSIRDAIREGT-GFTANLECNRGVDGETQLFQVYQCIDRDGENLIDCPLPMQ 293
           L  I +AIR G       L+C +     T+L ++  C D+ GE+ IDCP P +
Sbjct: 157 LLDIENAIRNGADNKKPKLKCQKK-GTTTELVEITLCSDKSGEHFIDCPHPFE 208

>RNS2_PYRPY (Q40965) Ribonuclease S-2 precursor (EC 3.1.27.1) (S2-RNase)|
          Length = 221

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -1

Query: 448 LSSIRDAIREGTG-FTANLECNRGVDGETQLFQVYQCIDRDGENLIDCPLPM 296
           L  I++AIR GT      L+C + V+G T+L +V  C D +    I+CP P+
Sbjct: 156 LLEIQNAIRAGTNNMIPKLKCQK-VNGMTELVEVTLCHDSNLTQFINCPRPL 206

>RNS5_PYRPY (P93460) Ribonuclease S-5 precursor (EC 3.1.27.1) (S5-RNase)|
          Length = 227

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -1

Query: 448 LSSIRDAIREGT-GFTANLECNRGVDGETQLFQVYQCIDRDGENLIDCPLPMQ 293
           L  I +AIR G       L+C +     T+L ++  C D+ GE+ IDCP P +
Sbjct: 162 LLDIENAIRNGADNKKPKLKCQKK-GTTTELVEITLCSDKSGEHFIDCPHPFE 213

>RNS2_ANTHI (Q38716) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 2) (S2-RNase)
          Length = 235

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 22/57 (38%), Positives = 28/57 (49%)
 Frame = -1

Query: 448 LSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRDGENLIDCPLPMQGNCKD 278
           +S +  AI + TG  A L+C  G      L +V  C D  G  +IDCP P    CKD
Sbjct: 170 VSDVNGAITKVTGGIAILKCPEGY-----LTEVIICFDPSGFPVIDCPGPFP--CKD 219

>VGLI_BHV1S (Q08102) Glycoprotein I|
          Length = 380

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
 Frame = +3

Query: 153 SSRAPCRWPAASSQSAATPRRAAAMDVQLELKFNQKAGSWTLSLQLPCIGSGQSMRFSPS 332
           S +AP   PA    + A PRR   +D   E++   +AGS   +L  P  G   S   SPS
Sbjct: 210 SPQAPPPRPAPPRAARAGPRRPERVDETTEVEAATRAGS-AFALTTPPAGPTASPAASPS 268

Query: 333 RSMHWYTWNSCVSPS--TP-RLHSRFAVNPVPSLMASLMLL 446
           R+       +   P+  TP R   + A   VP  +  L+LL
Sbjct: 269 RAFSAAAPAAAAQPAGDTPARFRRQLASILVPLCVLVLLLL 309

>RNDI_DICDI (Q7M438) Ribonuclease DdI precursor (EC 3.1.27.1) (RNase DdI)|
          Length = 223

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -1

Query: 439 IRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRDGENLIDCPLPMQGNCKDRVQLPA 260
           I +AI    G    ++C+ G     QL  V  CID++  +++DCP     +C   V+ P+
Sbjct: 167 ITNAITTHFGGKPGIQCSSG-----QLSTVAVCIDKNSLSIMDCPDLQGWSCSGSVKFPS 221

>RNS6_NICAL (Q40379) Ribonuclease S-6 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 6) (S6-RNase)
          Length = 215

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -1

Query: 448 LSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRDGENLIDCPLP 299
           +  I + I+  T    NL C +G     +L+ V  C D   +N+IDCP P
Sbjct: 156 VQKINNTIKTVTKGYPNLSCTKG----QELWFVGICFDSTAKNVIDCPNP 201

>RNS4_PYRPY (Q40966) Ribonuclease S-4 precursor (EC 3.1.27.1) (S4-RNase)|
          Length = 228

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 448 LSSIRDAIREGTGFTA-NLECNRGVDGETQLFQVYQCIDRDGENLIDCP 305
           L  I +AIR G   T    +C +     T+L +V  C +RD    I+CP
Sbjct: 163 LVDIENAIRSGNNNTKPKFKCQKNTRTTTELVEVTLCSNRDLTKFINCP 211

>RNS2_NICAL (P04007) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 2) (S2-RNase)
          Length = 214

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -1

Query: 448 LSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRDGENLIDCPLP 299
           + ++ + I+  TG   NL C+R      +L ++  C D   +N+IDCP P
Sbjct: 156 VQNLNNTIKAITGGFPNLTCSR----LRELKEIGICFDETVKNVIDCPNP 201

>IF2_TROWT (Q83GT8) Translation initiation factor IF-2|
          Length = 803

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = -3

Query: 362 AVPGVPVHRPRRGEPHRLPAADAGQLQRQGPAAGLLIKFE 243
           AV GVP   PR G     P    GQL   GPA    +KF+
Sbjct: 98  AVRGVPSGAPRPGNNPYAPRQGMGQLATPGPATKRPVKFK 137

>IF2_TROW8 (Q83HG7) Translation initiation factor IF-2|
          Length = 803

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = -3

Query: 362 AVPGVPVHRPRRGEPHRLPAADAGQLQRQGPAAGLLIKFE 243
           AV GVP   PR G     P    GQL   GPA    +KF+
Sbjct: 98  AVRGVPSGAPRPGNNPYAPRQGMGQLATPGPATKRPVKFK 137

>RNS2_SOLTU (Q01796) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 2) (S2-RNase)
          Length = 223

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = -1

Query: 439 IRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRDGENLIDC 308
           I+DAI+  T    +L+C   + G  +L+++  C   + ++L  C
Sbjct: 162 IQDAIKTVTQEVPDLKCVENIQGVLELYEIGICFTPEADSLFPC 205

>RNS7_NICAL (Q40381) Ribonuclease S-7 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 7) (S7-RNase)
          Length = 218

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 448 LSSIRDAIREGTGFTANLECNRGVDGETQLFQVYQCIDRDGENLIDCPLP 299
           +  I   I++ T    NL C +G+    +L ++  C D   +N+I+CP P
Sbjct: 158 VQKINSTIKKITQGYPNLSCTKGI---MELVEIGICFDSMVKNVINCPHP 204

>PCX3_MOUSE (Q8VI59) Pecanex-like protein 3|
          Length = 1620

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +3

Query: 177  PAASSQSAATPRRAAAMDVQLELKFNQKAGSWTLSLQLPCIGSGQSMRFSPS 332
            PA+ S    TP+  A +D+ L    + +A     +  LPC+ S      +PS
Sbjct: 1543 PASGSPKGGTPKSQAPLDLSLSPDVSSEASPARTTQDLPCLDSSIPEGCTPS 1594

>NMDE4_HUMAN (O15399) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D) (EB11)
          Length = 1336

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
 Frame = -3

Query: 398  PGVQPW------RRRRDAAVPGVPVHRPRRGEPHRLPAADAGQLQRQGPAAG 261
            P   PW      RRR     P    HRPR    HR PAA A    R   AAG
Sbjct: 1209 PPPPPWAAGPLPRRRARCGCPRSHPHRPRAS--HRTPAAAAPHHHRHRRAAG 1258

>DPOL_ADE04 (P87503) DNA polymerase (EC 2.7.7.7)|
          Length = 1193

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 19/46 (41%), Positives = 21/46 (45%)
 Frame = -3

Query: 401 EPGVQPWRRRRDAAVPGVPVHRPRRGEPHRLPAADAGQLQRQGPAA 264
           +PG QP RRR   + PG  V  P R    R PA  A    R  P A
Sbjct: 18  DPGRQPSRRRSRQSSPGA-VPEPARARRRRAPATTASG-SRAAPTA 61

>OXAA_RHIME (Q92SF5) Inner membrane protein oxaA|
          Length = 594

 Score = 24.3 bits (51), Expect(2) = 9.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 219 AAMDVQLELKFNQKAGSWTLSLQLP 293
           A M +  E K N  AG W + +Q+P
Sbjct: 426 AMMQLYKEEKINPLAGCWPILIQIP 450



 Score = 22.3 bits (46), Expect(2) = 9.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 320 VLPVAVDALVHLEQLRLAVDATVALQVRREPGPLPD 427
           +LP    A +HL    + +  T+ LQ+R  P P PD
Sbjct: 491 LLPFEGPAFLHLGIWPIIMGVTMFLQMRMNPTP-PD 525


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,428,604
Number of Sequences: 219361
Number of extensions: 1231090
Number of successful extensions: 3709
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3709
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)