>gb|AF000939.1|AF000939 Hordeum vulgare aleurone ribonuclease mRNA, partial cds
          Length = 739

 Score =  387 bits (195), Expect = e-104
 Identities = 195/195 (100%)
 Strand = Plus / Minus

                                                                       
Query: 257 gaaggccggcagctggaccctgtctttgcagttgccctgcatcggcagcgggcagtcgat 316
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gaaggccggcagctggaccctgtctttgcagttgccctgcatcggcagcgggcagtcgat 680

                                                                       
Query: 317 gaggttctccccgtcgcggtcgatgcactggtacacctggaacagctgcgtctcgccgtc 376
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gaggttctccccgtcgcggtcgatgcactggtacacctggaacagctgcgtctcgccgtc 620

                                                                       
Query: 377 gacgccacggttgcactccaggttcgccgtgaacccggtcccctccctgatggcgtccct 436
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gacgccacggttgcactccaggttcgccgtgaacccggtcccctccctgatggcgtccct 560

                          
Query: 437 gatgctgctgaggaa 451
           |||||||||||||||
Sbjct: 559 gatgctgctgaggaa 545

>ref|NM_193078.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1085

 Score =  113 bits (57), Expect = 5e-22
 Identities = 99/113 (87%)
 Strand = Plus / Minus

                                                                       
Query: 288 ttgccctgcatcggcagcgggcagtcgatgaggttctccccgtcgcggtcgatgcactgg 347
           |||||||||||||| ||  ||||||||| ||| |||| ||||  |||||||| |||||||
Sbjct: 793 ttgccctgcatcgggagttggcagtcgacgagcttcttcccggagcggtcgacgcactgg 734

                                                                
Query: 348 tacacctggaacagctgcgtctcgccgtcgacgccacggttgcactccaggtt 400
           ||||||||||||||||||||||||||| || || | ||||||||||| |||||
Sbjct: 733 tacacctggaacagctgcgtctcgccggcggcgtcgcggttgcactcgaggtt 681

>ref|XM_506490.1| PREDICTED Oryza sativa (japonica cultivar-group), P0011H09.133 mRNA
          Length = 1097

 Score =  113 bits (57), Expect = 5e-22
 Identities = 99/113 (87%)
 Strand = Plus / Minus

                                                                       
Query: 288 ttgccctgcatcggcagcgggcagtcgatgaggttctccccgtcgcggtcgatgcactgg 347
           |||||||||||||| ||  ||||||||| ||| |||| ||||  |||||||| |||||||
Sbjct: 795 ttgccctgcatcgggagttggcagtcgacgagcttcttcccggagcggtcgacgcactgg 736

                                                                
Query: 348 tacacctggaacagctgcgtctcgccgtcgacgccacggttgcactccaggtt 400
           ||||||||||||||||||||||||||| || || | ||||||||||| |||||
Sbjct: 735 tacacctggaacagctgcgtctcgccggcggcgtcgcggttgcactcgaggtt 683

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  113 bits (57), Expect = 5e-22
 Identities = 99/113 (87%)
 Strand = Plus / Minus

                                                                            
Query: 288      ttgccctgcatcggcagcgggcagtcgatgaggttctccccgtcgcggtcgatgcactgg 347
                |||||||||||||| ||  ||||||||| ||| |||| ||||  |||||||| |||||||
Sbjct: 26089039 ttgccctgcatcgggagttggcagtcgacgagcttcttcccggagcggtcgacgcactgg 26088980

                                                                     
Query: 348      tacacctggaacagctgcgtctcgccgtcgacgccacggttgcactccaggtt 400
                ||||||||||||||||||||||||||| || || | ||||||||||| |||||
Sbjct: 26088979 tacacctggaacagctgcgtctcgccggcggcgtcgcggttgcactcgaggtt 26088927

>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0011H09
          Length = 147992

 Score =  113 bits (57), Expect = 5e-22
 Identities = 99/113 (87%)
 Strand = Plus / Minus

                                                                          
Query: 288    ttgccctgcatcggcagcgggcagtcgatgaggttctccccgtcgcggtcgatgcactgg 347
              |||||||||||||| ||  ||||||||| ||| |||| ||||  |||||||| |||||||
Sbjct: 122601 ttgccctgcatcgggagttggcagtcgacgagcttcttcccggagcggtcgacgcactgg 122542

                                                                   
Query: 348    tacacctggaacagctgcgtctcgccgtcgacgccacggttgcactccaggtt 400
              ||||||||||||||||||||||||||| || || | ||||||||||| |||||
Sbjct: 122541 tacacctggaacagctgcgtctcgccggcggcgtcgcggttgcactcgaggtt 122489

>dbj|AK104512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H11, full
           insert sequence
          Length = 1085

 Score =  113 bits (57), Expect = 5e-22
 Identities = 99/113 (87%)
 Strand = Plus / Minus

                                                                       
Query: 288 ttgccctgcatcggcagcgggcagtcgatgaggttctccccgtcgcggtcgatgcactgg 347
           |||||||||||||| ||  ||||||||| ||| |||| ||||  |||||||| |||||||
Sbjct: 793 ttgccctgcatcgggagttggcagtcgacgagcttcttcccggagcggtcgacgcactgg 734

                                                                
Query: 348 tacacctggaacagctgcgtctcgccgtcgacgccacggttgcactccaggtt 400
           ||||||||||||||||||||||||||| || || | ||||||||||| |||||
Sbjct: 733 tacacctggaacagctgcgtctcgccggcggcgtcgcggttgcactcgaggtt 681

>dbj|AK060320.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F07, full
           insert sequence
          Length = 1097

 Score =  113 bits (57), Expect = 5e-22
 Identities = 99/113 (87%)
 Strand = Plus / Minus

                                                                       
Query: 288 ttgccctgcatcggcagcgggcagtcgatgaggttctccccgtcgcggtcgatgcactgg 347
           |||||||||||||| ||  ||||||||| ||| |||| ||||  |||||||| |||||||
Sbjct: 795 ttgccctgcatcgggagttggcagtcgacgagcttcttcccggagcggtcgacgcactgg 736

                                                                
Query: 348 tacacctggaacagctgcgtctcgccgtcgacgccacggttgcactccaggtt 400
           ||||||||||||||||||||||||||| || || | ||||||||||| |||||
Sbjct: 735 tacacctggaacagctgcgtctcgccggcggcgtcgcggttgcactcgaggtt 683

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 353    ctggaacagctgcgtctcgccgtcga 378
              |||||||||| |||||||||||||||
Sbjct: 688667 ctggaacagcggcgtctcgccgtcga 688692

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 151    aatccagccgcgcgccgtgca 171
              |||||||||||||||||||||
Sbjct: 679144 aatccagccgcgcgccgtgca 679124

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 171     agatggccggccgcgtcgagc 191
               |||||||||||||||||||||
Sbjct: 6052564 agatggccggccgcgtcgagc 6052584

>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0045D11
              map near 50283S, complete sequence
          Length = 148306

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    cgacgggcggcggcaatgga 229
              ||||||||||||||||||||
Sbjct: 115281 cgacgggcggcggcaatgga 115300

>gb|AY658221.1| Synthetic construct Peudomonas aeruginosa clone FLH052493.01F
           PA0777 gene, partial cds
          Length = 753

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gccgcgcgccgtgcagatgg 176
           ||||||||||||||||||||
Sbjct: 195 gccgcgcgccgtgcagatgg 214

>gb|AC129567.8| Mus musculus chromosome 8, clone RP23-50L10, complete sequence
          Length = 228046

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   ctggtacacctggaacagct 363
             ||||||||||||||||||||
Sbjct: 50172 ctggtacacctggaacagct 50191

>emb|AL109618.1|HSJ775C13 Human DNA sequence from clone RP4-775C13 on chromosome 20p12.1-13
             Contains an NS1-associated protein 1 (NSAP1) pseudogene,
             complete sequence
          Length = 103819

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   caacacaaaggtacatccat 145
             ||||||||||||||||||||
Sbjct: 65107 caacacaaaggtacatccat 65088

>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 162    gcgccgtgcagatggccggccgcgtcga 189
              |||| ||||||||||| |||||||||||
Sbjct: 241408 gcgcggtgcagatggcgggccgcgtcga 241435

>gb|AC119741.3| Homo sapiens 3 BAC RP11-570O24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191857

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    tgtctttgcagttgccctgc 296
              ||||||||||||||||||||
Sbjct: 102038 tgtctttgcagttgccctgc 102019

>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete
             sequence
          Length = 152172

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   gcgccgtgcagatggccggc 181
             ||||||||||||||||||||
Sbjct: 33128 gcgccgtgcagatggccggc 33109

>gb|AC084430.13| Homo sapiens 12p BAC RP11-96B19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 72022

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 432   tccctgatgctgctgaggaa 451
             ||||||||||||||||||||
Sbjct: 49769 tccctgatgctgctgaggaa 49750

>gb|AC008641.7| Homo sapiens chromosome 5 clone CTB-17P3, complete sequence
          Length = 176629

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    aagattagaagtctttattc 40
             ||||||||||||||||||||
Sbjct: 97489 aagattagaagtctttattc 97470

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 210      cgacgggcggcggcaatgga 229
                ||||||||||||||||||||
Sbjct: 13982444 cgacgggcggcggcaatgga 13982463

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 162      gcgccgtgcagatggccggc 181
                ||||||||||||||||||||
Sbjct: 19343253 gcgccgtgcagatggccggc 19343272

>gb|AC008666.5|AC008666 Homo sapiens chromosome 5 clone CTB-35A8, complete sequence
          Length = 99108

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   aagattagaagtctttattc 40
            ||||||||||||||||||||
Sbjct: 1414 aagattagaagtctttattc 1433

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 162     gcgccgtgcagatggccggccgcgtcga 189
               ||||||||||| ||| ||||||||||||
Sbjct: 2808375 gcgccgtgcagctggacggccgcgtcga 2808402

>gb|AE004851.1| Pseudomonas aeruginosa PAO1, section 412 of 529 of the complete
            genome
          Length = 13101

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 159  cgcgcgccgtgcagatggccggcc 182
            ||||||| ||||||||||||||||
Sbjct: 6179 cgcgcgcggtgcagatggccggcc 6156

>gb|AE004512.1| Pseudomonas aeruginosa PAO1, section 73 of 529 of the complete genome
          Length = 10081

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 157  gccgcgcgccgtgcagatgg 176
            ||||||||||||||||||||
Sbjct: 6749 gccgcgcgccgtgcagatgg 6730

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                           
Query: 198     gccgccacacccc-gacgggcggcggca 224
               ||||||||||||| ||||||||||||||
Sbjct: 5162600 gccgccacacccccgacgggcggcggca 5162627

>gb|AE005041.1| Halobacterium sp. NRC-1 section 72 of 170 of the complete genome
          Length = 13759

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  cggtcccctccctgatggcg 431
            ||||||||||||||||||||
Sbjct: 2482 cggtcccctccctgatggcg 2463

>dbj|AP002543.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F15M7
          Length = 74350

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 242  actcaaatttaatcagaagg 261
            ||||||||||||||||||||
Sbjct: 9263 actcaaatttaatcagaagg 9282

>gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequence
          Length = 156330

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    ttagaactcaaatttaatca 256
              ||||||||||||||||||||
Sbjct: 130581 ttagaactcaaatttaatca 130562

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   catccatcacgtaatccagc 158
             ||||||||||||||||||||
Sbjct: 94660 catccatcacgtaatccagc 94641

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 162      gcgccgtgcagatggccggc 181
                ||||||||||||||||||||
Sbjct: 19354529 gcgccgtgcagatggccggc 19354548

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 210      cgacgggcggcggcaatgga 229
                ||||||||||||||||||||
Sbjct: 14064446 cgacgggcggcggcaatgga 14064465


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,516,625
Number of Sequences: 3902068
Number of extensions: 3516625
Number of successful extensions: 62417
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 61758
Number of HSP's gapped (non-prelim): 660
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)